Spg022495.1 (mRNA) Sponge gourd (cylindrica) v1

Overview
NameSpg022495.1
TypemRNA
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold2: 15636087 .. 15640377 (+)
Sequence length690
RNA-Seq ExpressionSpg022495.1
SyntenySpg022495.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGCTCGAGCTCACGTTTTGAGATTCAGATGCTACACCATTCGTCCACCATTCGACGAGGCCAGGTATGAGACAGGTTCGAGGAGGAGGAGTGTGGTAGGGAGGCTTAATCATTTGCACAACAGGTTCGATTACCTTCTCTTTTCGGCCAGTGATGAGGAACCTGTTCACGGATTGGTTATTATGCGTTTGTTCATGCCTGAGACCCTCTTATTACCAATTAAATTTCTTTTTGTTCAATGAAATTCATGTGGAATAACTTTGGGAATCTGTCAATTTGCGCTTGTCTGTGTTCTTCAAATTTGTCCTTTTCCATTTGTACTCCACGGATCTGATGTGCACTGTGTTTGTTCTTGGCTGGGGCTGATTTCGTATGATGTTCTTAAACTCTGAGGCCTATTCCCATGGGAATCACATTCCCAGGCATCCACATTCCATACCCGTGGGCCAAACAGCCCCTAAATCTACACCCAACCCACTTCTTCCCATCATTAATATTCTAAATCTAGACTTCATGAGCACAGACTTCCTAAACCTGCCACTTGAACTCCCAAATTTTAAGATGTTGAATTCACATCCCGGATATTTTCAAGAATACAATTTGTACGGTGATTTGAAAACAAAAATCTTAAAATAAGAGAAAAACAAAAATTAGTATTTTATCCATATTTCCTTGTATTTGGTTATAAATCATAGAACTCATTTGGAAAGATGTAAATGTTAAATTTCCACTTTTTAGATCATATAGTTCAGATATTATTTAAAATTAGAATATTCCCACCAAACAACCACGTAATCTAATAAGAAAATTTGAAAATAAGAAATGAAATTCAGTACAGACATCATTTTCTAGGAAATGTTCATGCTGGGCATTGAAATGAAAATGGAAAACTAGAATATTAAATATATATTTTTGTCCTTGATCCATAGTTTTTTTTTTTTTTTTTGAAAAAGGAAATTCATTAATAAGAAAGAAGATTGGTACAACTAACATCCTCAGAAATTAAAGAGGAAAGCCACATTGGGCAAGCAACATTCCTAAAAAAATATCACTTCCAGCATGGAAGATGGAATGAGCTCAAAACAACTGCCATCAATGGCGGAAGACAGGGAGATTGTCGGCCTGAGACCACCTGCATTTCGCGCGAGAAGGTGCACGATCTTGTTGCCATCCCTAGGGCATTTAACGAAAGCCATCACTCCAACCTTGGAAGCTAAATCTTCGATATCTTCCAGCACGACTTTTGAATCTGAAAAGTCTTCGCAGACACGGTTTAAAGGGTTGATCGTGTCAAGGGAGTCGGATTCCATGATAATCAACGCTGGCTTGGGACAATCTGAGTTCAGGTACGCGATTAAACCCTCCTTGATCCCCAATAATTCCAGCATTTTGATGGAATTCTTTCTCTGAACCTTCCCACAGCCAACCCCAACTGGAGACTCATCGAAATCACGGAGGATCCAGCCCACACCCCCAGTCCGCTGCTATTGTTCCACGAGGCGTCCACATTTAGCTTGATGCAGCAAGGCGGAGGGGGACCAACTCGGGTGATTCGGGCGACTCTCTGTGGTGATCTTAGCCAGGTTTGCATCCACTCTCTTCCTTTGGTCTTCCCAGTAGGGGTGTACATGGTTGGGTTGGGTTGGGTTGGGTTGGGGGGATTTTTTGGACCAACCCAAAAATTCGGGTTGGTCGGGTTGTCAACTCGAATAAACCGAATGTATATGGCAACCCAACCCAACCCAAAAATTCGGGTTGGGTTGGGTTGGGTTGCCGGGTTCTTTTAAAAAAATACTTAAAAATTTTTTTGTTCAAAGATTTATGCTTATCCACAATATTATAATGTAAATATCAAGACATAAAAAGTCTAAATTATTTAGATTAAATAAAAAGGAAGTTAAAAAACAAAAAAGAAACGGAAAAAATAATCCTTGGCTTTATGGAGTTTGAAAGGAAAAAAGTTTATATAATTATTTGAAGTTTGAATAAATAAATAAAATAAAAAACACAAAACATTTGTGGCTGAGAACAAGTTATCATTGAACAAAATTAAAAAAAGGGAAAAGAAAAAAACATAAAAATAAATAATATTAAAAATAAATATTCATTTGTAATTTATAAGGCTCAACACTAAACATTCAGAATTGTAGAGAACGCTATGACCCCTAAGCCAGACACGTAACATGTAAACTAACTGGCAAATATTATATATATACTTTGGTTCGGTTCGGGTTGAACCGAGCCAAGATTTCCTAAACCCGTTAACCGAACCGAATTTTCAGTTTTATAAAATTTTAACCCAACCCAAACCGAAAAAAATCCTAACCCAACCCAACCCTTACGGTTTGGGTTGGGTAATCCAGGTTGTCGGGTTTTTTGTACACCCCTACTTGCCAGCATCTTTTTATGTCTTTTGTGAGAATCTTGAAATCTGGCATGTCTGAGGAGATAGTTATCTTGTTCCTGAAGTTCCAAATCGACTATATCGCCAAAGCCGCTTTCTCAAACTCTTCGGTGTTTAGAATTCTAACTATCCCTTCCCAGATCTGCTTCGTTCCATCTTCCTCCCTGCAAGCATTAAGAAAATTATTTAGAATTGGGAATTCGTCCCTCCAAACTCTCCTTGACACCTTGAATTTCCATATCGTGTGCGTCGGGGATTCAATTGCAGCCCTGCACATGGAGCAGCAAGGGTTGATGTCCATCCCTTTGTTTATAAGGTTAAGCTTGGAGGGGATGTAGTTTTTGATAATTTTCCAGATGCCAATTTTGGCTCTAGGGATGATATTTTGCTTCCAAATTCTCCTCCAATTGAGTCTTTGGTTCTCTAGGCTTGAACACGAAGCTTCACTGGTCAATGCTAACCGTTGAGAGAGGTGGTAGGCACTCTTAACACTGAAACAACCCTTGGAGTCTAGGTGCCATCTGATTTCGTCCTTGCTATCCTTTCTTCCCAGAGGAATGGAGAGAATATCTTCCACGTCCATGGGTAAGAAGCTCATTTCGATTAAGGGGGCATTCCATTCAATGTTCTCCAAAATAAGGGCCTTCATTCTAGCCCCTTTTATGCATTCGGGCACCATTAGGGGAAAACAAAAGCCCTCCCTAGAGAGCCACGAGTCTTGGTCAATAAAGATGTGGTTCCCCTTTCCAATTCGCCAACTATAGCCTTCCTTGAAGAGCTCTTTCCCCCAGACAATACTTTTCCAAACCATTGATGAGTTCTTTCCGGCTTGGGCATTAAGGAAGTCGCCATCCCTGAAGTATCTTCCTCTTAGAGTTTTGTACAGGAGGCTATTTTGATCTCTAATAATTCTCCAACTCTGCTTTACGAGCATTGTTTGGTTGAAGAGGTGGATGTCCCTAAACCCAAGCCCCCCCCCCCCCCGAATCTTTACTTTTACACAATTTGCCCCAGCTGGCCCAATGAAGCTTCTTTTTGTCACCAACAGCCCCGCACCAGAACTTTGCACACAACCTATTAATTTTGTCACAGAGGAGCTTTGGGAGCTTGAAGCATCCCATTGTATAGGTAGGAATAGCTTGGACCACAACCTTGATCAGAAGCTCTTTACCCCCTACTGAAAATAACTTTTCCTTCCAGCCTTGAAGAGTCTTCTCCACCTTCTCACCGATCTTACCAAACATGTCTCTCTTGCTTTTGCTGCTCTTATAAGGCATACCGAGGTAAGAACCCAACGACATTGTTTGCTTGATTCCCAAAATGGATCCGATCTCCTTAGCTTCAACTGGCCACACGTTTTCGCTGACCATGAACAAAGATTTATCTAAGTTGATCATTTGTCCAGAGGCCAGCTCGTATTTCATGAAGATCTCTTTCATGACTGTGCATTCTTTTCTCAAGGACCTACAAAAGATTAGGCTACCGTCAACAATCCGCAGCAAGTAATAAGTATTTATCAAATCCAAGATCTGAATTAGCTTTCACTTTATCTATTTTGTTTAGTTTTTCAATGGTTTCAAGAATGGTTAAAATGATTGGTTTTTATAGAATGCTGAAGCAAAAGAAATGACAGAACAGGAAATAAACAAATAGGCAGACATACTAGAAACAAGCGTTGGTCAGGTTTTAGTAATTGTTTTAAAATATGCTCTAGCAATATTATTGATCATGCAAAACTCTCGCAGTCTTATTAGCGGATTCCTCCCGGAACTCCAGATTTTTTAGAATATGTTTCAACTCCAATGAAGCTCTACCAATCAAGCACTAGGCAACTGGCTATCCCTAGCTCAGTCACTGGCGTTCACCAATACACAATGATCTAG

mRNA sequence

ATGTCGGCTCGAGCTCACGTTTTGAGATTCAGATGCTACACCATTCGTCCACCATTCGACGAGGCCAGGTATGAGACAGGTTCGAGGAGGAGGAGTGTGGTAGGGAGGCTTAATCATTTGCACAACAGCATGGAAGATGGAATGAGCTCAAAACAACTGCCATCAATGGCGGAAGACAGGGAGATTGTCGGCCTGAGACCACCTGCATTTCGCGCGAGAAGGTGCACGATCTTGTTGCCATCCCTAGGGCATTTAACGAAAGCCATCACTCCAACCTTGGAAGCTAAATCTTCGATATCTTCCAGCACGACTTTTGAATCTGAAAAGTCTTCGCAGACACGGTTTAAAGGGTTGATCGTGTCAAGGGAGTCGGATTCCATGATAATCAACGCTGGCTTGGGACAATCTGAGTTCAGACTCATCGAAATCACGGAGGATCCAGCCCACACCCCCAGTCCGCTGCTATTGTTCCACGAGGCGTCCACATTTAGCTTGATGCAGCAAGGCGGAGGGGGACCAACTCGGGTGATTCGGGCGACTCTCTGTGGTGATCTTAGCCAGCGGATTCCTCCCGGAACTCCAGATTTTTTAGAATATGTTTCAACTCCAATGAAGCTCTACCAATCAAGCACTAGGCAACTGGCTATCCCTAGCTCAGTCACTGGCGTTCACCAATACACAATGATCTAG

Coding sequence (CDS)

ATGTCGGCTCGAGCTCACGTTTTGAGATTCAGATGCTACACCATTCGTCCACCATTCGACGAGGCCAGGTATGAGACAGGTTCGAGGAGGAGGAGTGTGGTAGGGAGGCTTAATCATTTGCACAACAGCATGGAAGATGGAATGAGCTCAAAACAACTGCCATCAATGGCGGAAGACAGGGAGATTGTCGGCCTGAGACCACCTGCATTTCGCGCGAGAAGGTGCACGATCTTGTTGCCATCCCTAGGGCATTTAACGAAAGCCATCACTCCAACCTTGGAAGCTAAATCTTCGATATCTTCCAGCACGACTTTTGAATCTGAAAAGTCTTCGCAGACACGGTTTAAAGGGTTGATCGTGTCAAGGGAGTCGGATTCCATGATAATCAACGCTGGCTTGGGACAATCTGAGTTCAGACTCATCGAAATCACGGAGGATCCAGCCCACACCCCCAGTCCGCTGCTATTGTTCCACGAGGCGTCCACATTTAGCTTGATGCAGCAAGGCGGAGGGGGACCAACTCGGGTGATTCGGGCGACTCTCTGTGGTGATCTTAGCCAGCGGATTCCTCCCGGAACTCCAGATTTTTTAGAATATGTTTCAACTCCAATGAAGCTCTACCAATCAAGCACTAGGCAACTGGCTATCCCTAGCTCAGTCACTGGCGTTCACCAATACACAATGATCTAG

Protein sequence

MSARAHVLRFRCYTIRPPFDEARYETGSRRRSVVGRLNHLHNSMEDGMSSKQLPSMAEDREIVGLRPPAFRARRCTILLPSLGHLTKAITPTLEAKSSISSSTTFESEKSSQTRFKGLIVSRESDSMIINAGLGQSEFRLIEITEDPAHTPSPLLLFHEASTFSLMQQGGGGPTRVIRATLCGDLSQRIPPGTPDFLEYVSTPMKLYQSSTRQLAIPSSVTGVHQYTMI
Homology
The following BLAST results are available for this feature:
BLAST of Spg022495.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg022495.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg022495.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg022495.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spg022495Spg022495gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg022495.1-cdsSpg022495.1-cds-scaffold2:15636087..15636214CDS
Spg022495.1-cdsSpg022495.1-cds-scaffold2:15637149..15637436CDS
Spg022495.1-cdsSpg022495.1-cds-scaffold2:15637529..15637673CDS
Spg022495.1-cdsSpg022495.1-cds-scaffold2:15640249..15640377CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spg022495.1Spg022495.1-proteinpolypeptide