Spg021574.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg021574.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold9: 6890919 .. 6891678 (-)
Sequence length	291
RNA-Seq Expression	Spg021574.1
Synteny	Spg021574.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAGTGGCGGGAGTGGCGACGCTGGAGATCTGTCGAGCGGCAGTGCGGCTGGTTCCTCTTTTTTTTACTTCTTGTCGAGAGATACAGAGAAAGAAAGGGGGTTGAGGAAGAAAGAGAAGCGTGAAGGGGAAGATTTGTTGCTTTTTAAAAAAATATCTTTTTTTTTATTTTTTTTATTTTTAAGAACCAACTAACCTGAATTTGGGGGGCTGGCGTGGATTTCGCCCCCCTCACTCCCAGGATTTTTTTTTATTAATAATGTACTTTAATAAAAAAAACAAATTTAGAGGCGTTCTAAAAGTAATTCCAAAAATAGGGTAGCTAAATCGTGTACGTCGGCCGCGATTTCAATAAGTCGTGGACTGTGGTCACGATTCCGAGGGTAACTCGCATACCTGGTACGTGACTTTTTTGTTGGCACGCTGACGAGGCATACATCACCAGGTTGGCGATGATTTGGCACTGATTTGGCGCTGACGTCGCGCCAGCGAACTCGTGTACCTGGTACACGATTTACTTAACAAAATCGTGTACCAGGTACACGATTTTTTGGTCCATGAAACCCTACCCCACTCGTGAACGCGCCGCAAACCCAGATACCCCCCCTCGGCTTTTTCTCCCTTCTTCTGCTTTTTGCTTCGTACGCCGCCGTTCCAAGTGCCGTCGCCGTCGTTCCAAGTTGCCGTCGCCGCCGTTCCGCCGACCTGTGACCTCGCCGCCGCCTGGGTTCCACGCCGTTCAGTTCGCCGCCGCCTAG

mRNA sequence

ATGCGAGTGGCGGGAGTGGCGACGCTGGAGATCTGTCGAGCGGCAGTGCGGCTGGGTAACTCGCATACCTGGTACACGATTTTTTGGTCCATGAAACCCTACCCCACTCGTGAACGCGCCGCAAACCCAGATACCCCCCCTCGGCTTTTTCTCCCTTCTTCTGCTTTTTGCTTCGTACGCCGCCGTTCCAAGTGCCGTCGCCGTCGTTCCAAGTTGCCGTCGCCGCCGTTCCGCCGACCTGTGACCTCGCCGCCGCCTGGGTTCCACGCCGTTCAGTTCGCCGCCGCCTAG

Coding sequence (CDS)

ATGCGAGTGGCGGGAGTGGCGACGCTGGAGATCTGTCGAGCGGCAGTGCGGCTGGGTAACTCGCATACCTGGTACACGATTTTTTGGTCCATGAAACCCTACCCCACTCGTGAACGCGCCGCAAACCCAGATACCCCCCCTCGGCTTTTTCTCCCTTCTTCTGCTTTTTGCTTCGTACGCCGCCGTTCCAAGTGCCGTCGCCGTCGTTCCAAGTTGCCGTCGCCGCCGTTCCGCCGACCTGTGACCTCGCCGCCGCCTGGGTTCCACGCCGTTCAGTTCGCCGCCGCCTAG

Protein sequence

MRVAGVATLEICRAAVRLGNSHTWYTIFWSMKPYPTRERAANPDTPPRLFLPSSAFCFVRRRSKCRRRRSKLPSPPFRRPVTSPPPGFHAVQFAAA

Homology

The following BLAST results are available for this feature:

BLAST of Spg021574.1 vs.


Match Name	E-value	Identity	Description

BLAST of Spg021574.1 vs.


Match Name	E-value	Identity	Description

BLAST of Spg021574.1 vs.


Match Name	E-value	Identity	Description

BLAST of Spg021574.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..86

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg021574	Spg021574	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg021574.1-cds	Spg021574.1-cds-scaffold9:6890919..6891138	CDS
Spg021574.1-cds	Spg021574.1-cds-scaffold9:6891278..6891294	CDS
Spg021574.1-cds	Spg021574.1-cds-scaffold9:6891625..6891678	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg021574.1	Spg021574.1-protein	polypeptide