Spg020947.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg020947.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RING-type E3 ubiquitin transferase
Location	scaffold9: 1453949 .. 1456363 (-)
Sequence length	570
RNA-Seq Expression	Spg020947.1
Synteny	Spg020947.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAAATCTGCGATTTAAGTCACGATAAAGCATGGGTAACTTAGGTTAACGCTACTTGAGTCATGGGTAACTTAAATTTGAAGCCAAATGAGAATGGGTCAAGCTAATACTTACAGAAATTTCCAAATGACGACCAACGAGGGCTAGAACAACGCCAAAACACACCGGACAGAGGCAAAATTGTGAGAGATGCTGAACGCACGGGATCTGAGCAAAACGAGAGAAAAGGATATTAGATTGAGCTTAAAGCAGCCAAAGACGAGAGAGAGAAAAACTTACGCGCGGATCTTGTGGCGTAGGCACTGATTTGCAGGAACGGCTGGAGAAGGGCGGTGCGACGTGGGTAGTCGATTTTCGGCAGAAAACGAGGAAGGAGAGGGAAGAAGATCGCTGACCCACGACTTCCTTGTTGCCGGAGAAAGAAAAATAGAGGGAAAGGGAGACGAGGGCAACGGTGGCGACGGTGCGAGAAGGCTGGGGCGGCGACAACAAACACAGAAAAACGAGGGGGAGAGATGGAGAAGGAGAAGACGACGGTGGCTGGGCGAGAAAGACAGACCGGTGGCGACAAGGAAGAGACCACGGCGTGGAGAAAAAACTAACGGGAGAAGGGGCGGTGCGGCTGGAAGAAGGGAAATTGACAATAATGGGCCGTTTAAGTTTTATGTTCAGAAAATTGGGCCCATTCTTGTAAAAAATGTTTCTAAGGACACCAGGCCATTTGAAATGTCAATAATACCCCTCATATAACATTCAAACGTTGCCCCCTTTATTGTTTTACCGTCTCTTCAGTTCCCTCTCGATAGAAAACTCGATGCAAATCTCCCTCTCTTTCGTTTGGCTTCGTCTCTGGTAAATAACTCGAGCAAAATTTCCCTATCGTTTCGTTTCGTCTCTGGTAAAGAATTCGAGCAAAATCTCAACCAACAAGGTATGATTTATTTCAGTTGTTTTTTTAGGGTTTTTGAACATTAGATTTCGTCCAAGAGGCGTTTTTATCTTCTTCTATTTCGATTAATCTATAGTGGGAAGGGGTGTTCTTTATCTTTTGTTTCTTCTCTGTGTGTGGGGGTTGCATTTTGAAACTTTTTTTCATCGTGGTTGGAGGAAAAAACCCTGGTTTTTTGCCAAGTTTTTAATCTAATTTTGTTGTTTTTTCAAGTCCGATTTCTACCGAGATTTGAACCGAGTTTTACACCAGAGACCATGTTTTGGCCAGAGTTTTGGACCGACACATGATTTTGAAGCAAATTTCTTTCAAAACCCGATTGCTACCGAGTTTTACACCAGAATTGTGACCGACACCAAGTTTTGGACAACGTTTTGGCCAAATCTCCCTCTCTTTCGTTTCTGTTTCGATTCTCTCGGTAGAATACTCAATTCTGCGATCTCTTCCTCTGCTCCACAGTTCAGGTTCTTCTTCTTCTTTTTCTTCGTTTTATTCTTTGTTTGAATATTCATATCGCAATCTACTTTGAAGTTCAGGTGCTGTTTCTTCGTGTTTTTTTTTTGTTCTCTGGTAGATGTAATTATTGCATTCTTGTTGCGAAATTTTCTCTGAAAAGTCGTTTTGATTTTTGTTGCATTACGTGAGTTTTAGGTCTCTCTTCCTTCGCTCTCTGCTTTTGATCATATGTGAATGGAAGTCTTGCCCTCGTAAGATTGTTGTTTATTTGTTAGCTTGTTTTTTTTTGTTCTGCAACTTTGCTGAGTTCTTAGCTGGTTCTCTGTTGAAATTAATTGAGTTTGGTTATAATAATTATGCACTATGCCATTTTAATGGGAATATTTCGCTTTTGCAGTGTGTGATCAGTTGTTCTTTTCGGAGTTAATGAGGGAAGCCTCAGATATTGCGGGATGTTTCAGCACAAGAGTCAGACATCTTCTTCATCTTCATGTTGCGAGTGGAATCGAAAGATACATGACGCGATTGGTTCATTGCTTTAAAAATGATCAAACGACGATGATACAAGAAGGCCGCATGTTGATTGAATATGTTACAATGAATGTTATTGCCATCAGAAAAAATTCTCAAGAAATATGATAAAGTGAGTTTCAACCCAAATAAATATTCTGAAAATTTTTCGATTTGAGTTTGTTTGTTTCAAGTTAAGGACGTAATTTTTGTGTGTTTAAATAATCGTCTATAGGTACATAACTCTATAAACGGAAAGAACTTTAAGTTGAAAATGCGAGCTGAACATATGGAGCTTTTGCAATCCCCTTGGCTTATAGAATTGGGTGCTTTTTGTTTGAATTTTAAAGGATCCGATGGTGGAGATTATCCCTCAGAATTCTCCACTCAGTTGTCTGTCCATGTCGATGTGGCTCCAACAATGACATTGAAATTACAAATGCCCTCGGAAGAAAAGAGGTGTAAATTTGCCAATGCTATGTTATTATCTATGTAA

mRNA sequence

ATGGCCAAAATCTGCGATTTAAGTCACGATAAAGCATGGTTCCCTCTCGATAGAAAACTCGATGCAAATCTCCCTCTCTTTCGTTTGGCTTCGTCTCTGGTAAATAACTCGAGCAAAATTTCCCTATCGTTTCGTTTCGTCTCTGGTAAAGAATTCGAGCAAAATCTCAACCAACAAGTGTGTGATCAGTTGTTCTTTTCGGAGTTAATGAGGGAAGCCTCAGATATTGCGGGATGTTTCAGCACAAGAGTCAGACATCTTCTTCATCTTCATGTTGCGAGTGGAATCGAAAGATACATGACGCGATTGGTACATAACTCTATAAACGGAAAGAACTTTAAGTTGAAAATGCGAGCTGAACATATGGAGCTTTTGCAATCCCCTTGGCTTATAGAATTGGGTGCTTTTTGTTTGAATTTTAAAGGATCCGATGGTGGAGATTATCCCTCAGAATTCTCCACTCAGTTGTCTGTCCATGTCGATGTGGCTCCAACAATGACATTGAAATTACAAATGCCCTCGGAAGAAAAGAGGTGTAAATTTGCCAATGCTATGTTATTATCTATGTAA

Coding sequence (CDS)

ATGGCCAAAATCTGCGATTTAAGTCACGATAAAGCATGGTTCCCTCTCGATAGAAAACTCGATGCAAATCTCCCTCTCTTTCGTTTGGCTTCGTCTCTGGTAAATAACTCGAGCAAAATTTCCCTATCGTTTCGTTTCGTCTCTGGTAAAGAATTCGAGCAAAATCTCAACCAACAAGTGTGTGATCAGTTGTTCTTTTCGGAGTTAATGAGGGAAGCCTCAGATATTGCGGGATGTTTCAGCACAAGAGTCAGACATCTTCTTCATCTTCATGTTGCGAGTGGAATCGAAAGATACATGACGCGATTGGTACATAACTCTATAAACGGAAAGAACTTTAAGTTGAAAATGCGAGCTGAACATATGGAGCTTTTGCAATCCCCTTGGCTTATAGAATTGGGTGCTTTTTGTTTGAATTTTAAAGGATCCGATGGTGGAGATTATCCCTCAGAATTCTCCACTCAGTTGTCTGTCCATGTCGATGTGGCTCCAACAATGACATTGAAATTACAAATGCCCTCGGAAGAAAAGAGGTGTAAATTTGCCAATGCTATGTTATTATCTATGTAA

Protein sequence

MAKICDLSHDKAWFPLDRKLDANLPLFRLASSLVNNSSKISLSFRFVSGKEFEQNLNQQVCDQLFFSELMREASDIAGCFSTRVRHLLHLHVASGIERYMTRLVHNSINGKNFKLKMRAEHMELLQSPWLIELGAFCLNFKGSDGGDYPSEFSTQLSVHVDVAPTMTLKLQMPSEEKRCKFANAMLLSM

Homology

[Close]

BLAST of Spg020947.1 vs. NCBI nr
Match: XP_038903375.1 (LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase BAH1-like [Benincasa hispida])

HSP 1 Score: 192.2 bits (487), Expect = 4.1e-45
Identity = 101/149 (67.79%), Postives = 105/149 (70.47%), Query Frame = 0


Query: 60  VCDQLFFSELMREASDIAGCFSTRVRHLLHLHVASGIERYMTRL---------------- 119
           +CDQLFFSELMREASDIAGCFSTRVRHLLHLHVA GIERYMTRL                
Sbjct: 57  LCDQLFFSELMREASDIAGCFSTRVRHLLHLHVAGGIERYMTRLVHCFKTDQTTLIQEGR 116

Query: 120 ----------------------VHNSINGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK 171
                                 VH+S+NGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK
Sbjct: 117 MLIEYVTMNAIAIRKILKKYDKVHSSVNGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK 176

[Close]

BLAST of Spg020947.1 vs. NCBI nr
Match: XP_008442986.1 (PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like isoform X2 [Cucumis melo] >KAA0043771.1 putative E3 ubiquitin-protein ligase BAH1-like isoform X2 [Cucumis melo var. makuwa] >TYK25362.1 putative E3 ubiquitin-protein ligase BAH1-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 185.3 bits (469), Expect = 5.0e-43
Identity = 97/149 (65.10%), Postives = 103/149 (69.13%), Query Frame = 0


Query: 60  VCDQLFFSELMREASDIAGCFSTRVRHLLHLHVASGIERYMTRL---------------- 119
           +CDQLFFSELMREASDIAGCF+TRVRHLLHLHVA GIERYMTRL                
Sbjct: 57  LCDQLFFSELMREASDIAGCFNTRVRHLLHLHVAGGIERYMTRLVHCFKSDQTTLIQEGR 116

Query: 120 ----------------------VHNSINGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK 171
                                 VH+S+NGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK
Sbjct: 117 MLIEYVTMNAIAIRKILKKYDKVHSSVNGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK 176

[Close]

BLAST of Spg020947.1 vs. NCBI nr
Match: XP_008442983.1 (PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like isoform X1 [Cucumis melo] >XP_008442985.1 PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like isoform X1 [Cucumis melo])

HSP 1 Score: 185.3 bits (469), Expect = 5.0e-43
Identity = 97/149 (65.10%), Postives = 103/149 (69.13%), Query Frame = 0


Query: 60  VCDQLFFSELMREASDIAGCFSTRVRHLLHLHVASGIERYMTRL---------------- 119
           +CDQLFFSELMREASDIAGCF+TRVRHLLHLHVA GIERYMTRL                
Sbjct: 57  LCDQLFFSELMREASDIAGCFNTRVRHLLHLHVAGGIERYMTRLVHCFKSDQTTLIQEGR 116

Query: 120 ----------------------VHNSINGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK 171
                                 VH+S+NGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK
Sbjct: 117 MLIEYVTMNAIAIRKILKKYDKVHSSVNGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK 176

[Close]

BLAST of Spg020947.1 vs. NCBI nr
Match: XP_031739330.1 (probable E3 ubiquitin-protein ligase BAH1-like isoform X2 [Cucumis sativus] >KGN59253.1 hypothetical protein Csa_001320 [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 1.9e-42
Identity = 96/149 (64.43%), Postives = 102/149 (68.46%), Query Frame = 0


Query: 60  VCDQLFFSELMREASDIAGCFSTRVRHLLHLHVASGIERYMTRL---------------- 119
           VCDQLFFSELMREASDIAGCF+TRVRHLLHLHVA GIERYM+RL                
Sbjct: 57  VCDQLFFSELMREASDIAGCFNTRVRHLLHLHVAGGIERYMSRLVHCFKTDQTTLIQEGR 116

Query: 120 ----------------------VHNSINGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK 171
                                 VH+S+NGKNFKL+MRAEHMELLQSPWLIELGAFCLNFK
Sbjct: 117 MLIEYVTMNAIAIRKILKKYDKVHSSVNGKNFKLRMRAEHMELLQSPWLIELGAFCLNFK 176

[Close]

BLAST of Spg020947.1 vs. NCBI nr
Match: XP_004136542.2 (probable E3 ubiquitin-protein ligase BAH1-like isoform X1 [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 1.9e-42
Identity = 96/149 (64.43%), Postives = 102/149 (68.46%), Query Frame = 0


Query: 60  VCDQLFFSELMREASDIAGCFSTRVRHLLHLHVASGIERYMTRL---------------- 119
           VCDQLFFSELMREASDIAGCF+TRVRHLLHLHVA GIERYM+RL                
Sbjct: 57  VCDQLFFSELMREASDIAGCFNTRVRHLLHLHVAGGIERYMSRLVHCFKTDQTTLIQEGR 116

Query: 120 ----------------------VHNSINGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK 171
                                 VH+S+NGKNFKL+MRAEHMELLQSPWLIELGAFCLNFK
Sbjct: 117 MLIEYVTMNAIAIRKILKKYDKVHSSVNGKNFKLRMRAEHMELLQSPWLIELGAFCLNFK 176

[Close]

BLAST of Spg020947.1 vs. ExPASy Swiss-Prot
Match: Q8GW10 (Probable E3 ubiquitin-protein ligase BAH1-like OS=Arabidopsis thaliana OX=3702 GN=RF178 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.9e-25
Identity = 68/152 (44.74%), Postives = 86/152 (56.58%), Query Frame = 0


Query: 61  CDQLFFSELMREASDIAGCFSTRVRHLLHLHVASGIERYMTRL----------------- 120
           CDQ+FF ELM+EA+DIAG F +RVRHLLHLHVA+G++RYM RL                 
Sbjct: 71  CDQMFFEELMKEATDIAGFFRSRVRHLLHLHVATGMQRYMIRLRRCFTDEKQALVQEGQI 130

Query: 121 ---------------------VHNSINGKNFKLKMRAEHMELLQSPWLIELGAFCLNFKG 175
                                VH+S NGKNFKLKMRAE +ELL SPWLIELGAF LN   
Sbjct: 131 LIQYITMNAIAIRKILKKYDKVHSSENGKNFKLKMRAERIELLHSPWLIELGAFYLNSGL 190

[Close]

BLAST of Spg020947.1 vs. ExPASy Swiss-Prot
Match: A2XK56 (Probable E3 ubiquitin-protein ligase BAH1-like 1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_12825 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.5e-21
Identity = 61/154 (39.61%), Postives = 84/154 (54.55%), Query Frame = 0


Query: 60  VCDQLFFSELMREASDIAGCFSTRVRHLLHLHVASGIERYMTRL---------------- 119
           +CDQ+FF+EL +EAS+IAGCFS+RV+ LL+LHV SG  RY+ R+                
Sbjct: 70  LCDQMFFTELTKEASEIAGCFSSRVQRLLNLHVPSGFLRYIWRVRQCFIDDQQIMVQEGR 129

Query: 120 ----------------------VHNSINGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK 171
                                 +H S++G++FK KM+ +H+ELLQSPWLIELGAF LN  
Sbjct: 130 MLLNYVTMNAIAIRKILKKYDKIHGSVSGRDFKSKMQTDHIELLQSPWLIELGAFHLNCN 189

[Close]

BLAST of Spg020947.1 vs. ExPASy Swiss-Prot
Match: Q7XZZ3 (Probable E3 ubiquitin-protein ligase BAH1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0650900 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.5e-21
Identity = 61/154 (39.61%), Postives = 84/154 (54.55%), Query Frame = 0


Query: 60  VCDQLFFSELMREASDIAGCFSTRVRHLLHLHVASGIERYMTRL---------------- 119
           +CDQ+FF+EL +EAS+IAGCFS+RV+ LL+LHV SG  RY+ R+                
Sbjct: 70  LCDQMFFTELTKEASEIAGCFSSRVQRLLNLHVPSGFLRYIWRVRQCFIDDQQIMVQEGR 129

Query: 120 ----------------------VHNSINGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK 171
                                 +H S++G++FK KM+ +H+ELLQSPWLIELGAF LN  
Sbjct: 130 MLLNYVTMNAIAIRKILKKYDKIHGSVSGRDFKSKMQTDHIELLQSPWLIELGAFHLNCN 189

[Close]

BLAST of Spg020947.1 vs. ExPASy Swiss-Prot
Match: B8B5U8 (Probable E3 ubiquitin-protein ligase BAH1-like 1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_27296 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.8e-11
Identity = 46/150 (30.67%), Postives = 68/150 (45.33%), Query Frame = 0


Query: 60  VCDQLFFSELMREASDIAGCFSTRVRHLLHLHVASGIERY-------------------- 119
           VCD  FF  L+ E S + GCF+ + + LL LH+ASG ++Y                    
Sbjct: 56  VCDGSFFPSLLNEMSAVVGCFNEKAKKLLELHLASGFKKYTMWFTSKGHKSHGALIQQGK 115

Query: 120 ------------MTRL------VHNSINGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK 171
                       M ++      +H S  G+ FK + ++ H+E+LQSPWL EL AF +N +
Sbjct: 116 DLVTYAIINAVAMRKILKKYDKIHYSKQGQEFKAQAQSLHIEILQSPWLCELMAFYMNLR 175

[Close]

BLAST of Spg020947.1 vs. ExPASy Swiss-Prot
Match: Q7XI73 (Probable E3 ubiquitin-protein ligase BAH1-like 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0673200 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 8.9e-11
Identity = 46/150 (30.67%), Postives = 68/150 (45.33%), Query Frame = 0


Query: 60  VCDQLFFSELMREASDIAGCFSTRVRHLLHLHVASGIERY-------------------- 119
           VCD  FF  L+ E S + GCF+ + + LL LH+ASG ++Y                    
Sbjct: 56  VCDGSFFPSLLNEMSAVIGCFNEKAKKLLELHLASGFKKYTMWFTSKGHKSHGALIQQGK 115

Query: 120 ------------MTRL------VHNSINGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK 171
                       M ++      +H S  G+ FK + ++ H+E+LQSPWL EL AF +N +
Sbjct: 116 DLVTYAIINAVAMRKILKKYDKIHYSKQGQEFKAQAQSLHIEILQSPWLCELMAFYMNLR 175

[Close]

BLAST of Spg020947.1 vs. ExPASy TrEMBL
Match: A0A1S3B703 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103486720 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 2.4e-43
Identity = 97/149 (65.10%), Postives = 103/149 (69.13%), Query Frame = 0


Query: 60  VCDQLFFSELMREASDIAGCFSTRVRHLLHLHVASGIERYMTRL---------------- 119
           +CDQLFFSELMREASDIAGCF+TRVRHLLHLHVA GIERYMTRL                
Sbjct: 57  LCDQLFFSELMREASDIAGCFNTRVRHLLHLHVAGGIERYMTRLVHCFKSDQTTLIQEGR 116

Query: 120 ----------------------VHNSINGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK 171
                                 VH+S+NGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK
Sbjct: 117 MLIEYVTMNAIAIRKILKKYDKVHSSVNGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK 176

[Close]

BLAST of Spg020947.1 vs. ExPASy TrEMBL
Match: A0A5D3DPA7 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005010 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 2.4e-43
Identity = 97/149 (65.10%), Postives = 103/149 (69.13%), Query Frame = 0


Query: 60  VCDQLFFSELMREASDIAGCFSTRVRHLLHLHVASGIERYMTRL---------------- 119
           +CDQLFFSELMREASDIAGCF+TRVRHLLHLHVA GIERYMTRL                
Sbjct: 57  LCDQLFFSELMREASDIAGCFNTRVRHLLHLHVAGGIERYMTRLVHCFKSDQTTLIQEGR 116

Query: 120 ----------------------VHNSINGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK 171
                                 VH+S+NGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK
Sbjct: 117 MLIEYVTMNAIAIRKILKKYDKVHSSVNGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK 176

[Close]

BLAST of Spg020947.1 vs. ExPASy TrEMBL
Match: A0A1S3B726 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103486720 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 2.4e-43
Identity = 97/149 (65.10%), Postives = 103/149 (69.13%), Query Frame = 0


Query: 60  VCDQLFFSELMREASDIAGCFSTRVRHLLHLHVASGIERYMTRL---------------- 119
           +CDQLFFSELMREASDIAGCF+TRVRHLLHLHVA GIERYMTRL                
Sbjct: 57  LCDQLFFSELMREASDIAGCFNTRVRHLLHLHVAGGIERYMTRLVHCFKSDQTTLIQEGR 116

Query: 120 ----------------------VHNSINGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK 171
                                 VH+S+NGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK
Sbjct: 117 MLIEYVTMNAIAIRKILKKYDKVHSSVNGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK 176

[Close]

BLAST of Spg020947.1 vs. ExPASy TrEMBL
Match: A0A0A0LBP6 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G790460 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 9.2e-43
Identity = 96/149 (64.43%), Postives = 102/149 (68.46%), Query Frame = 0


Query: 60  VCDQLFFSELMREASDIAGCFSTRVRHLLHLHVASGIERYMTRL---------------- 119
           VCDQLFFSELMREASDIAGCF+TRVRHLLHLHVA GIERYM+RL                
Sbjct: 57  VCDQLFFSELMREASDIAGCFNTRVRHLLHLHVAGGIERYMSRLVHCFKTDQTTLIQEGR 116

Query: 120 ----------------------VHNSINGKNFKLKMRAEHMELLQSPWLIELGAFCLNFK 171
                                 VH+S+NGKNFKL+MRAEHMELLQSPWLIELGAFCLNFK
Sbjct: 117 MLIEYVTMNAIAIRKILKKYDKVHSSVNGKNFKLRMRAEHMELLQSPWLIELGAFCLNFK 176

[Close]

BLAST of Spg020947.1 vs. ExPASy TrEMBL
Match: A0A6J1FB28 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111442419 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 4.0e-38
Identity = 93/154 (60.39%), Postives = 98/154 (63.64%), Query Frame = 0


Query: 59  QVCDQLFFSELMREASDIAGCFSTRVRHLLHLHVASGIERYMTRL--------------- 118
           ++CDQLFFSELMREA DIAGCFSTRVRHLLHLHVA GIERYM RL               
Sbjct: 51  ELCDQLFFSELMREALDIAGCFSTRVRHLLHLHVAGGIERYMARLVHCFKTDQTTMIQEG 110

Query: 119 -----------------------VHNSINGKNFKLKMRAEHMELLQSPWLIELGAFCLNF 171
                                  VH+S+NGKNFKLKMRAEH+ELLQSPWLIELGAFCLNF
Sbjct: 111 RMLIEYVTMNAIAIRKILKKYDKVHSSVNGKNFKLKMRAEHIELLQSPWLIELGAFCLNF 170

[Close]

BLAST of Spg020947.1 vs. TAIR 10
Match: AT2G38920.1 (SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related )

HSP 1 Score: 116.7 bits (291), Expect = 2.0e-26
Identity = 68/152 (44.74%), Postives = 86/152 (56.58%), Query Frame = 0


Query: 61  CDQLFFSELMREASDIAGCFSTRVRHLLHLHVASGIERYMTRL----------------- 120
           CDQ+FF ELM+EA+DIAG F +RVRHLLHLHVA+G++RYM RL                 
Sbjct: 71  CDQMFFEELMKEATDIAGFFRSRVRHLLHLHVATGMQRYMIRLRRCFTDEKQALVQEGQI 130

Query: 121 ---------------------VHNSINGKNFKLKMRAEHMELLQSPWLIELGAFCLNFKG 175
                                VH+S NGKNFKLKMRAE +ELL SPWLIELGAF LN   
Sbjct: 131 LIQYITMNAIAIRKILKKYDKVHSSENGKNFKLKMRAERIELLHSPWLIELGAFYLNSGL 190

[Close]

BLAST of Spg020947.1 vs. TAIR 10
Match: AT2G38920.2 (SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related )

HSP 1 Score: 116.7 bits (291), Expect = 2.0e-26
Identity = 68/152 (44.74%), Postives = 86/152 (56.58%), Query Frame = 0


Query: 61  CDQLFFSELMREASDIAGCFSTRVRHLLHLHVASGIERYMTRL----------------- 120
           CDQ+FF ELM+EA+DIAG F +RVRHLLHLHVA+G++RYM RL                 
Sbjct: 71  CDQMFFEELMKEATDIAGFFRSRVRHLLHLHVATGMQRYMIRLRRCFTDEKQALVQEGQI 130

Query: 121 ---------------------VHNSINGKNFKLKMRAEHMELLQSPWLIELGAFCLNFKG 175
                                VH+S NGKNFKLKMRAE +ELL SPWLIELGAF LN   
Sbjct: 131 LIQYITMNAIAIRKILKKYDKVHSSENGKNFKLKMRAERIELLHSPWLIELGAFYLNSGL 190

[Close]

BLAST of Spg020947.1 vs. TAIR 10
Match: AT2G38920.3 (SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related )

HSP 1 Score: 116.7 bits (291), Expect = 2.0e-26
Identity = 68/152 (44.74%), Postives = 86/152 (56.58%), Query Frame = 0


Query: 61  CDQLFFSELMREASDIAGCFSTRVRHLLHLHVASGIERYMTRL----------------- 120
           CDQ+FF ELM+EA+DIAG F +RVRHLLHLHVA+G++RYM RL                 
Sbjct: 71  CDQMFFEELMKEATDIAGFFRSRVRHLLHLHVATGMQRYMIRLRRCFTDEKQALVQEGQI 130

Query: 121 ---------------------VHNSINGKNFKLKMRAEHMELLQSPWLIELGAFCLNFKG 175
                                VH+S NGKNFKLKMRAE +ELL SPWLIELGAF LN   
Sbjct: 131 LIQYITMNAIAIRKILKKYDKVHSSENGKNFKLKMRAERIELLHSPWLIELGAFYLNSGL 190

[Close]

BLAST of Spg020947.1 vs. TAIR 10
Match: AT1G02860.1 (SPX (SYG1/Pho81/XPR1) domain-containing protein )

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-10
Identity = 39/123 (31.71%), Postives = 55/123 (44.72%), Query Frame = 0


Query: 60  VCDQLFFSELMREASDIAGCFSTRVRHLLHLHVASGIERYMTRL---------------- 119
           VCD  FF EL++E  D+ G F+   + LL LH+ASG  + +T L                
Sbjct: 60  VCDGTFFPELLKEMEDVVGWFNEHAQKLLELHLASGFTKCLTWLRGNSRKKDHHGLIQEG 119

Query: 120 -----------------------VHNSINGKNFKLKMRAEHMELLQSPWLIELGAFCLNF 144
                                  +H S  G+ FK +++   +E+LQSPWL EL AF +N 
Sbjct: 120 KDLVNYALINAVAIRKILKKYDKIHESRQGQAFKTQVQKMRIEILQSPWLCELMAFHINL 179

[Close]

BLAST of Spg020947.1 vs. TAIR 10
Match: AT1G02860.2 (SPX (SYG1/Pho81/XPR1) domain-containing protein )

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-10
Identity = 39/123 (31.71%), Postives = 55/123 (44.72%), Query Frame = 0


Query: 60  VCDQLFFSELMREASDIAGCFSTRVRHLLHLHVASGIERYMTRL---------------- 119
           VCD  FF EL++E  D+ G F+   + LL LH+ASG  + +T L                
Sbjct: 60  VCDGTFFPELLKEMEDVVGWFNEHAQKLLELHLASGFTKCLTWLRGNSRKKDHHGLIQEG 119

Query: 120 -----------------------VHNSINGKNFKLKMRAEHMELLQSPWLIELGAFCLNF 144
                                  +H S  G+ FK +++   +E+LQSPWL EL AF +N 
Sbjct: 120 KDLVNYALINAVAIRKILKKYDKIHESRQGQAFKTQVQKMRIEILQSPWLCELMAFHINL 179

The following BLAST results are available for this feature:

BLAST of Spg020947.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903375.1	4.1e-45	67.79	LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase BAH1-like [Benincasa h...	[more]
XP_008442986.1	5.0e-43	65.10	PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like isoform X2 [Cucumis me...	[more]
XP_008442983.1	5.0e-43	65.10	PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like isoform X1 [Cucumis me...	[more]
XP_031739330.1	1.9e-42	64.43	probable E3 ubiquitin-protein ligase BAH1-like isoform X2 [Cucumis sativus] >KGN...	[more]
XP_004136542.2	1.9e-42	64.43	probable E3 ubiquitin-protein ligase BAH1-like isoform X1 [Cucumis sativus]	[more]

BLAST of Spg020947.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GW10	2.9e-25	44.74	Probable E3 ubiquitin-protein ligase BAH1-like OS=Arabidopsis thaliana OX=3702 G...	[more]
A2XK56	2.5e-21	39.61	Probable E3 ubiquitin-protein ligase BAH1-like 1 OS=Oryza sativa subsp. indica O...	[more]
Q7XZZ3	2.5e-21	39.61	Probable E3 ubiquitin-protein ligase BAH1-like 1 OS=Oryza sativa subsp. japonica...	[more]
B8B5U8	6.8e-11	30.67	Probable E3 ubiquitin-protein ligase BAH1-like 1 OS=Oryza sativa subsp. indica O...	[more]
Q7XI73	8.9e-11	30.67	Probable E3 ubiquitin-protein ligase BAH1-like 2 OS=Oryza sativa subsp. japonica...	[more]

BLAST of Spg020947.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B703	2.4e-43	65.10	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103486720 PE=4 ...	[more]
A0A5D3DPA7	2.4e-43	65.10	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3B726	2.4e-43	65.10	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103486720 PE=4 ...	[more]
A0A0A0LBP6	9.2e-43	64.43	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G790460 PE...	[more]
A0A6J1FB28	4.0e-38	60.39	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111442419...	[more]

BLAST of Spg020947.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38920.1	2.0e-26	44.74	SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING f...	[more]
AT2G38920.2	2.0e-26	44.74	SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING f...	[more]
AT2G38920.3	2.0e-26	44.74	SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING f...	[more]
AT1G02860.1	1.6e-10	31.71	SPX (SYG1/Pho81/XPR1) domain-containing protein	[more]
AT1G02860.2	1.6e-10	31.71	SPX (SYG1/Pho81/XPR1) domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033326	E3 ubiquitin-protein ligase BAH1	PANTHER	PTHR46764	E3 UBIQUITIN-PROTEIN LIGASE BAH1	coord: 54..103
IPR033326	E3 ubiquitin-protein ligase BAH1	PANTHER	PTHR46764	E3 UBIQUITIN-PROTEIN LIGASE BAH1	coord: 104..171
None	No IPR available	PANTHER	PTHR46764:SF2	E3 UBIQUITIN-PROTEIN LIGASE BAH1-LIKE-RELATED	coord: 104..171 coord: 54..103

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg020947	Spg020947	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg020947.1-cds	Spg020947.1-cds-scaffold9:1453949..1454209	CDS
Spg020947.1-cds	Spg020947.1-cds-scaffold9:1454427..1454557	CDS
Spg020947.1-cds	Spg020947.1-cds-scaffold9:1455429..1455567	CDS
Spg020947.1-cds	Spg020947.1-cds-scaffold9:1456325..1456363	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg020947.1	Spg020947.1-protein	polypeptide