Spg019328.1 (mRNA) Sponge gourd (cylindrica) v1

Overview
NameSpg019328.1
TypemRNA
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold1: 44684877 .. 44691822 (+)
Sequence length729
RNA-Seq ExpressionSpg019328.1
SyntenySpg019328.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCCCCGAGCACAAGGACGTGGAAGAGGTCGTGGTAGGGGTCGTACAGCCCCTGAGCAAGTCGTGCCACCTGTGGAGCAAGAAGGAGATCTACCAGAAAACCCACAAGTGGAACAGCCGGGTGGACAGCCGGGGCCTGCGGTAGGACCTGTTACAGTGGATATCCAGGCAATAGTTCAGACCGCAGTTCAGGCTGCAGTTGCGGGCGTGCTTGCAGGGCGACAGGCCCAAGCGCCTCAAAACAACGAAGCCGCCCTATCACGGGAGGCTAGGTGCTTAAGAGATTTTAGGAAGTGGGACCCCTGTCCGTTCGATGGAGCCTCAAGGGACCCCACGGTAGCAGAGTTGTGGCTGTCCTCCATCGAGACCGTTTTTCGCCACATGAACTGCCCGGAGGACCAGAAAGTGTACTGCGCCGTGTTCCTATTACGAGATAACGCCCTGATTTGGTGGCAATCGATTGAAAGGACTATAGACGTCAGCAACGGACCTGTCACATGGGCTCAGTTCAGGGGGGAGTTCTTTCGGAAATATTACCCTGCCGCCTCCCGATTCAAGAAGCAATCAGAGTTCGTGGCTCTTACGCAGGGAAACCGAACCGTAGAGAAGTACGAGACAGAGTTTGCCAGACTGTCTCGGTTTGCCCCTGCCCTGGTAGCTGTAGAGGCTGATAAGGTGGAACGTTTCATTACAGGTTTAAAGGAGGAGATTCAGGGCAGTGTGGCAGCCCATGAACCCCAAGACTATGCCACGGCGGTTAGGGTGGCACAGCTGATTGATCGACAACCGTCAGCTGTCTCTTCAGAACCTTCTTCAGGTCATAAGCGAAGGTACGATCAGATGAGCTCGAACACACAGAGGGGTCACCGTTACCCCAGACAAGGTCCGCCCCAGGACCGTCGACGGAGAGCGCAGAATCAGTCAGGGCCTAATCAGGATAGGCCATTATGTCAGACCTGTAGGAAGTACCACTGGGGTCGTTGTTTGGCAGGGACCCGTGTTTGTTTCAAGTGTTGTCGGGAAGGGCATATTGCTCCGAATTGTAATCAGAAGAAAGTTAATTATGCCGACCAGCCGTCCAGTTCAAATCAGGCATCTGGGGCGAGACCAGCACAACATCAGGGCAAGATATTTGCCACCACCCAACGAGAGGCCGAGGACCTTAATGCAGTAGTGACAGGTACCATCCCTATCCTCGGCCGTTATGCTTTTGTGTTGTTTGATTCGGGTTCAACGCATTCTTTTATTTCTGCATCGTTTGTAAGTCAAGCCAACCTAGAACTAGAGTCGTTAGGCTATGTTTTGTCAGTCTCAACCCCTGCGGGGATAACGTTACTAGCTAGTGAAGCGGTGAAAGCCTGCCAAATGTTAGTGTCTGATCGATCAATGGATGTGACATTGATCGCCCTTGATATGAGTGATTTTGACGTTATTTTGGGAATGGAATGGTTGGCTTCTAATTATGCCAACATAGACTGTTATCGTAAGGAGGTGATCTTCAACCCTCCGTCAGAGGCAAGCTTCAAGTTTAAAGGGTCGATGATCAAAGGTGCTCCTAAAGTGGTCTCTGCAATGAAGGCGAGAAAATTGATTAGCCAAGGAGCCTGGGGCTTGTTGGCTAGCGTGGTTGACACAAGGAAAATCGAGACATCAATGACCTCGATACCGGTAGTGAGGGAATTCACAGATGTATTTCATGAGGATCTGACAGGACTACCGCCAGCACGTGAGGTTGACTTCTGCATTGAGCTTGAGCCAGGGACTAATCCGATTTCTAAAGCTCCATACAGGATGGCTCCAGCGGAATTGAAAGAGCTTAAGGTCCAGATTCAGGAGCTGTTGGACAAAGGTTATATACTCCCCAGCGTTTCGCCGTGGGGTGCTCCAGTTTTATTCGTGAAAAAGAAGGATGGGACAATGCGTTTGTGCATTGATTATCGGGAGCTGAACAAAGTGACAGTAAAGAACAGATACCCCCTGCCCAGGATTGATGACCTCTTTGATCAGCTTCAAGGTGCAGCAGTGTTTTCTAAAATAGATCTACGGTCAGGTTACCATCAGCTGAGGATTAGAGAGGACGATATACCCAAGACAGCCTTCCGAACCAGGTATGGGCATTACGAATTTACTGTGATGTCCTTTGGGCTTACTAATGCTCCCGCAGTTTTCATGGACTTGATGAACAGGGTATTTAAGGAATTCCTGGATTCATTTGTGATTGTTTTTATCGACGACATTCTTATCTATTCCAAGACGGAAGAGGAACATGAGGATCATCTCAGGAGAGTTCTAATTAACTTAAGAACGAACAAGTTGTATGCCAAATTCTCTAAATGTGAGTTTTGGTTACAACGAGTTTCCTTCTTAGGGCACGTGGTGTCGAAGGAAGGTGTCACAGTAGATCCAGCCAAAATAGAGGCAGTGACCAATTGGTCTCGACCCACTTCAGTCAGCGAGATTCGGAGTTTCTTGGGGTTAGCAGGATATTACCGTTGTTTTGTGCAAGGCTTTTCCAGTATTGCCGCACCCCTAACTCAGTTGACTCGAAAGGGTACTCCGTTTTTGTGGAACGAAGCTTGTGAGGCAAGCTTCCAAGAGCTTAAGCAAAGACTTGTTTCAGCACCAGTACTTACAGTACCTGATGGTTCAGGAGAATTTGTTATATACAGTGATGCTTCCAAGAAGGGACTGGGTTGTGTGTTAATGCAGCATGGTAAGGTCATTGCTTATGCGTCTCGTCAACTGAAAGATTATGAGAAGAACTACCCGACCCATGACTTGGAGTTAGCAGCAGTGGTCTTTGCCTTGAAGATTTGGAGACACTATTTATACGGAGAGAAAATCCAAATCTTCACGGACCACAAAAGCTTGAAATATCTCTTCACCCAGAAGGAGTTAAATATGAGGCAGCGGAGATGGTTAGAGTTAGTGAAAGATTATGATTGCGACATCCAGTACCACCCGGGGAAGGCAAATGTGGTTGCAGATGCCCTCAGTAGGAAGACTGCTCACACGTCTGCTTTGGTTACTACTCAGGCTCATATACTGGATGACTTGGAACGTGCAGAGATTATGATTGCAGTGGGCGAAGTTACAGCACGCCTAGCTCAGTTGACAGTTAAGTCGAGCTTGAGACAGAGGATCATAGATGAACAACCAAATGACCCAGACCTTGTTGTTAAACGCAGTCAAGTAGGGGGCGGGGCAGGTGAACGAGTTTTCCTTATCTTCAGACCTCGGTCTGTGTTACCAGGGTCGCTTATGCGTACCTGGGAATGCCGACCTCAAACAAGAATTATTAACAGAGGCACATAGTTCACCTTTTTCAATCCATCCAGGAAGTACGAAGATGTACCATGATTTAAAACAGTATTACTGGTGGTAGGGCATGAAAAGGGAGATAGCGGGTTTTGTCAGTAAATGCCTTGTTTGCCAACAAATGAAGGCCCCGAGACAGAAACCAGCGGGATTGTTACAGCCGTTAAGTGTCCCAGAGTGGAAGTGGGAGCATATATCTATGGACTTCATTACAGGATTGCCTAGAACGGTCAAGGGTTACTCCGTGATTTGGGTCATTATCGACAGACTCACTAAGTCAGCGCACTTTCTCCCTGGAAAGCCTACGTACACTGTTGATAAGTGGGCACAGTTATATATGACAGAGATAGTCAAGCTCCATGGTGTGCCGGTATCAATCGTGTCAGATAGAGACCCTCGGTTCACTTCTAACTTCTGGAGGAGTCTGCAAAGAGCCTTGGGTACTCAGTTACGTTTCAGTACAGCTTTTCACCCTCAGACAGATGGTCAAACTGAGCGATTGAACCAAACTCTAGAGGATATGTTGCGAGCATGTGTCTTGGATTTCTCAGGTAGTTGGGATGCACACCTGCACTTAATGGAATTCGCTTATAACAATAGTTATCAAGCGACCATCGGTATGTCACCGTTTGAGGCCCTCTATGGGAAGAGATGCAGGTCCCCTGTTTATTGGGGTGAGGTCGGAGAACGTCAGTTGTTGGGACCTGAATTGATTCAAGCCTCCAGTGAGGCTATTCGTACGATCAGATCGAGGATGTTAACACCCCAAAGCCGACAGAAGAGTTATGCTGATACAAGGAGAAGAGATTTAGAGTTTGACGTGGGTGATCATGTTTTCTTGAAGGTAGCTCCAATGAAAGGAGTATTAAGGTTTGGAAGGAAAGGCAAGCTCAGTCCGCGTTTCATTGGTCCGTTTGAAATTCTAGAACGGATTGGTCCGGTAGCTTATCGTCTAGCGTTTCCGCCTTCTCTTTCGGCGGTACACAACGTTTTCCATGTCTCCATGCTACGGAAGTATTTGGCAAATCCAACCCACAGGGTGGACTTTGAACCTTTACATTTGAGCGAGAACTTGTCTTATGAGGAGGAACCTGTGCTAATCCTTGACAGAGAGATGAAGGTCCTTCGCAATCGCGAGATAGCTCTCGTGAAGGTCCTTTGGCGAAACCATTTGTCTGAAGAGGCAACGTGGGAGAGAGAAGATGAAATGATGGCCAAGTATCAAGAGTTGTTCCAGTACTAGCAACTTTCGAGGACGAAAGTTCTTTTAAGGTTAGTATGATGTAACGGCAAGCTTTTGTTAAAAAAAAAAAAAAAAAAAAAAAGTGGGCATTAAAGGCCCGGTCAAAAAGGGGAGAAAGAGAAATGGGGGGAAACTTCCCCCCCAAATTCGGTCAAATGACCATTTAAAAAAAAAAAAAAAATCTGAGCTTTCTCTCTCTCCCTCTCACGATTCTCTCTCTCTCTCACAGCCCCCTTCATCTGGTCTCTCTCCCTCGCAGCCCTCTCTGTCTCCCTCCGCCGTCGCTCCTCCGCCGCCGCAGTACCGCCGTCGCCGCCGCTCGCCGACGGTAAGTTCCTTGTCTCTCCCTCCCGTTTTCGTTTTCTCTTTCTTTCTTTCTCTCTCTCTCTCTCTCTCACTCGCAACTCTCTCTCCCTCCTTCAGCCTTCAGCCGTGAATCGCCGCCGCCTTCAGCCGTGAAACCGCCGCCGTCTGTCCACGTCGTCGCGTCGCACGCCGCCGCCTTCAGCCGCACACCGCCGCCCGCCTCTCGCCGTCGAGCTCCGCCGCCGCCGAGATGTCGCCAACCGCAGCGAGCCGCTGTCGATTTGAGCAGCCACTACCGTTCTCGGGCTCGTTCGCTTTTTCAAATCTGTTCGTCGCCGCCACTTGAAGCTTCAGCTTTGCTTCTAAAGAATTATTTGGGGTAAGGGAGTTTTAAGTCAAAGCTTATTGGTCTGTTATGTCTTAATGAAATGCCCATTAATGTCGGATCTTAATCTAAGGTGTCCGTAGTAGGTGGTGGTCGAATCGTCAAAGGCAGAGCGAAACTTGGAAGTTGGATAACAAGCGATGTTTCTGTTTTGGGTGAGTTTTTGGGTGTTAATTTACCCTCAAATTTAAATGGGTTCATAGTTGAATGCTTGGATTAGAGTCCCTATTTAATTAAAGGTTCTTTCCTTGTTGTAGTTTGCTAAAGAGCCTTGGAGTTAAGAAATTTGTTGAAGGTTGATCCAATATCTTCTTCACTAAGGTAAGTAGCCGTTGGAATAAATTCTACGCTTTAAACTCATTAAAGTCGAGTATGGTTTACAATAGCATGAGCTGGATTTAATCCTTAAGTTGCCCCTTGGAATTTAAGTAGCTAATTGGATTCAAATTCCATGTTTTAAGTGTATTGTGTGATAGCTGAGCATGGTAAGTAACTTGCTGCATTGGAATGAAATGTTTATGTTTTTACTGCATATATACTTGTGTTGTGTGATAGAAGTGACTGTATGACTGATGTATATTTTGTGGCTGGCTTTTAGCAAATTGTGGTGCCTTGCAGCTTGTGTGGTTGGATAATCTGAATCGTAGAAGTGCTTTTTCCCCTTTCAGGTGAATAGGAAAATTTTGGGTTCCCCATATGCACGTCGTTATGCTGCCGAATTTTTGGTAGCATACGAGTGGTTTCAGGATTAGGAGTGTCGGTTGTCGCCTCCATTTCTTATTCTTGTGATATGACTGAGTTGGGAAGGTGCATATCAGTTAGCCTGTCAGTAATCTAGGAAAAGAAATCGATTGTGTTAAATAGGTTGCGGTTAAAGATTAGTAAGTGTTAAGGGGTCCTAAAGGGGAAAAGGATTAAGAAAGGGAAAGGAATAGGCTAGCGCCTTACAAGAGGGCCGTGTCAATTAAACACCTAGGACTGAGATGTAATAGACTGAAATGAGGGGCTTAATGGGCGGGTCTTGGCTTCGCAGTCTAGGTGCCATTTACTAACCGTGGAAGTTAATTCCTGACTTAAACCCATGAATGCCCCACCAGTGAAATGGTAGTTTAGAGCGCTACGCGCCCATTAGTGCCTTGAGGGATGAGACTTAGCTCCACTGACTGGGTGCCATCTACCATCAGTAGGAGTAGAGACCTCCCAAAACTCCCACATGTGCACTATCAGTGAGTTGGCAAACTTATATATATATAGGTGTACTAATTGAACACGAGACCCGAACTGCAGATAAATGAAATGAAATGAAATGAATGAGAATGAGATGACCTAACCCTTAGGCCCTTAACTCGAATAAAATGTTAAAACCTTGATTGCTACTTACTGAGTATTTTCTTAAATACTCATTCTTTTCCCTTCCATACAACTGCAGGTAGAGGTAAAGGTGTACAGGACGCGTGATGGAGAGCTGCTGAGCCATGGACCTCCTTTAGGATAGTCTTCCGCATTTTTATGTTTTGAAATTCTCCTTTTGAACTTGTATTGCGAATGATTTAAGATTTATTCCGCTTAAGTTTTTGTGTGAGTGACTAAAGTGTTCTTTGTGTTGTTTTAACTGGGATCCCAGACTGAAAAGTTTCGCAAAATTTCTAAGAATGTTTTCCTTAAATGATATTTCCTCGCTGTTCTTAGAA

mRNA sequence

ATGCCTCCCCGAGCACAAGGACGTGGAAGAGGTCGTGGTAGGGGTCGTACAGCCCCTGAGCAAGTCGTGCCACCTGTGGAGCAAGAAGGAGATCTACCAGAAAACCCACAAGTGGAACAGCCGGGTGGACAGCCGGGGCCTGCGGTAGGACCTGTTACAGTGGATATCCAGGCAATACCCTCTCTGTCTCCCTCCGCCGTCGCTCCTCCGCCGCCGCAGTACCGCCGTCGCCGCCGCTCGCCGACGGTAAGTTCCTTCCGTGAATCGCCGCCGCCTTCAGCCGTGAAACCGCCGCCGTCTGTCCACGTCGTCGCGTCGCACGCCGCCGCCTTCAGCCGCACACCGCCGCCCGCCTCTCGCCGTCGAGCTCCGCCGCCGCCGAGATGTCGCCAACCGCAGCGAGCCGCTGTCGATTTGAGCAGCCACTACCGTTCTCGGGCTCGTTCGCTTTTTCAAATCTGTTCGTCGCCGCCACTTGAAGCTTCAGCTTTGCTTCTAAAGAATTATTTGGGGTGGTGGTCGAATCGTCAAAGGCAGAGCGAAACTTGGAAGTTGGATAACAAGCGATGTTTCTGTTTTGGAGCCTTGGAGTTAAGAAATTTGTTGAAGGTTGATCCAATATCTTCTTCACTAAGCAAATTGTGGTGCCTTGCAGCTTGTGTGGTAGAGGTAAAGGTGTACAGGACGCGTGATGGAGAGCTGCTGAGCCATGGACCTCCTTTAGGATAG

Coding sequence (CDS)

ATGCCTCCCCGAGCACAAGGACGTGGAAGAGGTCGTGGTAGGGGTCGTACAGCCCCTGAGCAAGTCGTGCCACCTGTGGAGCAAGAAGGAGATCTACCAGAAAACCCACAAGTGGAACAGCCGGGTGGACAGCCGGGGCCTGCGGTAGGACCTGTTACAGTGGATATCCAGGCAATACCCTCTCTGTCTCCCTCCGCCGTCGCTCCTCCGCCGCCGCAGTACCGCCGTCGCCGCCGCTCGCCGACGGTAAGTTCCTTCCGTGAATCGCCGCCGCCTTCAGCCGTGAAACCGCCGCCGTCTGTCCACGTCGTCGCGTCGCACGCCGCCGCCTTCAGCCGCACACCGCCGCCCGCCTCTCGCCGTCGAGCTCCGCCGCCGCCGAGATGTCGCCAACCGCAGCGAGCCGCTGTCGATTTGAGCAGCCACTACCGTTCTCGGGCTCGTTCGCTTTTTCAAATCTGTTCGTCGCCGCCACTTGAAGCTTCAGCTTTGCTTCTAAAGAATTATTTGGGGTGGTGGTCGAATCGTCAAAGGCAGAGCGAAACTTGGAAGTTGGATAACAAGCGATGTTTCTGTTTTGGAGCCTTGGAGTTAAGAAATTTGTTGAAGGTTGATCCAATATCTTCTTCACTAAGCAAATTGTGGTGCCTTGCAGCTTGTGTGGTAGAGGTAAAGGTGTACAGGACGCGTGATGGAGAGCTGCTGAGCCATGGACCTCCTTTAGGATAG

Protein sequence

MPPRAQGRGRGRGRGRTAPEQVVPPVEQEGDLPENPQVEQPGGQPGPAVGPVTVDIQAIPSLSPSAVAPPPPQYRRRRRSPTVSSFRESPPPSAVKPPPSVHVVASHAAAFSRTPPPASRRRAPPPPRCRQPQRAAVDLSSHYRSRARSLFQICSSPPLEASALLLKNYLGWWSNRQRQSETWKLDNKRCFCFGALELRNLLKVDPISSSLSKLWCLAACVVEVKVYRTRDGELLSHGPPLG
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..133

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spg019328Spg019328gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg019328.1-cdsSpg019328.1-cds-scaffold1:44684877..44685053CDS
Spg019328.1-cdsSpg019328.1-cds-scaffold1:44689700..44689779CDS
Spg019328.1-cdsSpg019328.1-cds-scaffold1:44689871..44690125CDS
Spg019328.1-cdsSpg019328.1-cds-scaffold1:44690218..44690286CDS
Spg019328.1-cdsSpg019328.1-cds-scaffold1:44690399..44690452CDS
Spg019328.1-cdsSpg019328.1-cds-scaffold1:44690730..44690757CDS
Spg019328.1-cdsSpg019328.1-cds-scaffold1:44691561..44691626CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg019328.1-three_prime_utrSpg019328.1-three_prime_utr-scaffold1:44691627..44691822three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spg019328.1Spg019328.1-proteinpolypeptide