Spg014595.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg014595.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	dentin sialophosphoprotein isoform X2
Location	scaffold3: 43365950 .. 43367135 (+)
Sequence length	249
RNA-Seq Expression	Spg014595.1
Synteny	Spg014595.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGTCAAGTGTAAAGGCTGAGTAGTGAATACAAGGAACAATATTGGATTTTCTTTCCTGTTCTACATCCTCCAAGGGTGATTTTTGCTAAAGTTATAATATAATGCATGAATATGACATATTCTCCTCGTATCAATATTTCTTGTTAGTCTCATACATGCACCTTAAGATCTAATTTCTGCTTTTCTGGATGCCATTGTATTATTTCATTTTTTCTCAATGAAAGCTCGGCTCTTTATTAAAAAAAAAAAAAATCTGCTTTTCTGTCTGAAGTGTTTTTTTTTTCCTTGAGGTTTTGGCAATTTATGATTGTTGTACTTGAATTGCAATTTGACATCAGGTCATTGATGTTGGTGGGAAAGAGTTTAGGTTCACATGGTTACGTGAAGTTGGTGATCTTTGTGACGTATATGAAGAACGTAAAAGTGGAGAAGATGGAAGTGGTTTGCTTGTTGAATCAAGCAATGCTTGGAGAAAACTGAATGTGCAACGTATCTTGGACAAATCAACTACAAACCATGTTAAGAAGTTGTCTGAAGAAGCTGAACGTAGATCCAAGTCTCGTAGGTATGTGATCATGTATTGGGGATGTTTATTGCTTCTCTAGCTTTTGGCAATTAGAATTAGAAACTCGCAAAACTTAAAAGAAAACTTACAAACTGAAATGTTTAGATCCAACCTAAAAAAGAAATTTAAAACATTAAATTGAAAATTAAATGTAAAAAAATAAAAACAAAATGGCCATGGATGAACGGGAGAAGAGAATTTTAGAAGTCTTTTAGTGGTTAAGGGAGAATTGTTTGCACGGTTCAAACTGTGGTTTGCCTCATGTTTCTGGGTTCAAAAATTAGTGTTTCTATACGGAGTTTAATTTTCCATGAACTTCTTGAGAGGGAAAGAAAATGAGGTAAACAATTAGTTTGTCTGATTTCGTCGTTTGTCATTTTAATAATGAAATGTTATGTAGTTTGTGTTTAAAAAAAAATTTCACTCTTATCTTCCAATCGGGATCAGGTTTCTATTAGAATACTGTACTTGGATTGTGATGTACTTCTTTTGGCAGCTACGTTGGAGAATTTTTGCTATCTTTGTTGGAGAAGTTAGACCCTTGGAAAAAAAAAGAAGAAGCTAATTTGATGTCGTTTGTGACTTTGTTTTGGTGTCTAGATTTGGAACAACATTA

mRNA sequence

ATGACAGTCATTGATGTTGGTGGGAAAGAGTTTAGGTTCACATGGTTACGTGAAGTTGGTGATCTTTGTGACGTATATGAAGAACGTAAAAGTGGAGAAGATGGAAGTGGTTTGCTTGTTGAATCAAGCAATGCTTGGAGAAAACTGAATGTGCAACGTATCTTGGACAAATCAACTACAAACCATGTTAAGAAGTTGTCTGAAGAAGCTGAACGTAGATCCAAGTCTCGTAGATTTGGAACAACATTA

Coding sequence (CDS)

ATGACAGTCATTGATGTTGGTGGGAAAGAGTTTAGGTTCACATGGTTACGTGAAGTTGGTGATCTTTGTGACGTATATGAAGAACGTAAAAGTGGAGAAGATGGAAGTGGTTTGCTTGTTGAATCAAGCAATGCTTGGAGAAAACTGAATGTGCAACGTATCTTGGACAAATCAACTACAAACCATGTTAAGAAGTTGTCTGAAGAAGCTGAACGTAGATCCAAGTCTCGTAGATTTGGAACAACATTA

Protein sequence

MTVIDVGGKEFRFTWLREVGDLCDVYEERKSGEDGSGLLVESSNAWRKLNVQRILDKSTTNHVKKLSEEAERRSKSRRFGTTL

Homology

[Close]

BLAST of Spg014595.1 vs. NCBI nr
Match: XP_038883609.1 (dentin sialophosphoprotein isoform X2 [Benincasa hispida])

HSP 1 Score: 147.9 bits (372), Expect = 3.9e-32
Identity = 71/78 (91.03%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 1  MTVIDVGGKEFRFTWLREVGDLCDVYEERKSGEDGSGLLVESSNAWRKLNVQRILDKSTT 60
          + VIDVGGKEFRFTW REVGDLCD+YEERKSGEDGSGLL+ES NAWRKLNVQRILD+STT
Sbjct: 7  LVVIDVGGKEFRFTWSREVGDLCDIYEERKSGEDGSGLLIESGNAWRKLNVQRILDESTT 66

Query: 61 NHVKKLSEEAERRSKSRR 79
          NHVKKLSEEAERRSKSRR
Sbjct: 67 NHVKKLSEEAERRSKSRR 84

[Close]

BLAST of Spg014595.1 vs. NCBI nr
Match: XP_038883601.1 (dentin sialophosphoprotein isoform X1 [Benincasa hispida])

HSP 1 Score: 147.1 bits (370), Expect = 6.6e-32
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 3   VIDVGGKEFRFTWLREVGDLCDVYEERKSGEDGSGLLVESSNAWRKLNVQRILDKSTTNH 62
           VIDVGGKEFRFTW REVGDLCD+YEERKSGEDGSGLL+ES NAWRKLNVQRILD+STTNH
Sbjct: 123 VIDVGGKEFRFTWSREVGDLCDIYEERKSGEDGSGLLIESGNAWRKLNVQRILDESTTNH 182

Query: 63  VKKLSEEAERRSKSRR 79
           VKKLSEEAERRSKSRR
Sbjct: 183 VKKLSEEAERRSKSRR 198

[Close]

BLAST of Spg014595.1 vs. NCBI nr
Match: XP_022948918.1 (dentin sialophosphoprotein isoform X4 [Cucurbita moschata])

HSP 1 Score: 147.1 bits (370), Expect = 6.6e-32
Identity = 71/78 (91.03%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 1  MTVIDVGGKEFRFTWLREVGDLCDVYEERKSGEDGSGLLVESSNAWRKLNVQRILDKSTT 60
          + VIDVGGKEFRFTW REVGDLCD+YEERKSGEDGSGLLVES NAWRK+NVQRILD+STT
Sbjct: 7  LVVIDVGGKEFRFTWSREVGDLCDIYEERKSGEDGSGLLVESGNAWRKVNVQRILDESTT 66

Query: 61 NHVKKLSEEAERRSKSRR 79
          NHVKKLSEEAERRSKSRR
Sbjct: 67 NHVKKLSEEAERRSKSRR 84

[Close]

BLAST of Spg014595.1 vs. NCBI nr
Match: XP_023524754.1 (dentin sialophosphoprotein-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 147.1 bits (370), Expect = 6.6e-32
Identity = 71/78 (91.03%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 1  MTVIDVGGKEFRFTWLREVGDLCDVYEERKSGEDGSGLLVESSNAWRKLNVQRILDKSTT 60
          + VIDVGGKEFRFTW REVGDLCD+YEERKSGEDGSGLLVES NAWRK+NVQRILD+STT
Sbjct: 7  LVVIDVGGKEFRFTWSREVGDLCDIYEERKSGEDGSGLLVESGNAWRKVNVQRILDESTT 66

Query: 61 NHVKKLSEEAERRSKSRR 79
          NHVKKLSEEAERRSKSRR
Sbjct: 67 NHVKKLSEEAERRSKSRR 84

[Close]

BLAST of Spg014595.1 vs. NCBI nr
Match: XP_022997900.1 (dentin sialophosphoprotein isoform X4 [Cucurbita maxima])

HSP 1 Score: 147.1 bits (370), Expect = 6.6e-32
Identity = 71/78 (91.03%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 1  MTVIDVGGKEFRFTWLREVGDLCDVYEERKSGEDGSGLLVESSNAWRKLNVQRILDKSTT 60
          + VIDVGGKEFRFTW REVGDLCD+YEERKSGEDGSGLLVES NAWRK+NVQRILD+STT
Sbjct: 7  LVVIDVGGKEFRFTWSREVGDLCDIYEERKSGEDGSGLLVESGNAWRKVNVQRILDESTT 66

Query: 61 NHVKKLSEEAERRSKSRR 79
          NHVKKLSEEAERRSKSRR
Sbjct: 67 NHVKKLSEEAERRSKSRR 84

[Close]

BLAST of Spg014595.1 vs. ExPASy TrEMBL
Match: A0A6J1KB65 (dentin sialophosphoprotein isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111492713 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.2e-32
Identity = 71/78 (91.03%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 1  MTVIDVGGKEFRFTWLREVGDLCDVYEERKSGEDGSGLLVESSNAWRKLNVQRILDKSTT 60
          + VIDVGGKEFRFTW REVGDLCD+YEERKSGEDGSGLLVES NAWRK+NVQRILD+STT
Sbjct: 7  LVVIDVGGKEFRFTWSREVGDLCDIYEERKSGEDGSGLLVESGNAWRKVNVQRILDESTT 66

Query: 61 NHVKKLSEEAERRSKSRR 79
          NHVKKLSEEAERRSKSRR
Sbjct: 67 NHVKKLSEEAERRSKSRR 84

[Close]

BLAST of Spg014595.1 vs. ExPASy TrEMBL
Match: A0A6J1GAM8 (dentin sialophosphoprotein isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111452430 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.2e-32
Identity = 71/78 (91.03%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 1  MTVIDVGGKEFRFTWLREVGDLCDVYEERKSGEDGSGLLVESSNAWRKLNVQRILDKSTT 60
          + VIDVGGKEFRFTW REVGDLCD+YEERKSGEDGSGLLVES NAWRK+NVQRILD+STT
Sbjct: 7  LVVIDVGGKEFRFTWSREVGDLCDIYEERKSGEDGSGLLVESGNAWRKVNVQRILDESTT 66

Query: 61 NHVKKLSEEAERRSKSRR 79
          NHVKKLSEEAERRSKSRR
Sbjct: 67 NHVKKLSEEAERRSKSRR 84

[Close]

BLAST of Spg014595.1 vs. ExPASy TrEMBL
Match: A0A6J1K6B7 (dentin sialophosphoprotein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492713 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 5.5e-32
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 3   VIDVGGKEFRFTWLREVGDLCDVYEERKSGEDGSGLLVESSNAWRKLNVQRILDKSTTNH 62
           VIDVGGKEFRFTW REVGDLCD+YEERKSGEDGSGLLVES NAWRK+NVQRILD+STTNH
Sbjct: 123 VIDVGGKEFRFTWSREVGDLCDIYEERKSGEDGSGLLVESGNAWRKVNVQRILDESTTNH 182

Query: 63  VKKLSEEAERRSKSRR 79
           VKKLSEEAERRSKSRR
Sbjct: 183 VKKLSEEAERRSKSRR 198

[Close]

BLAST of Spg014595.1 vs. ExPASy TrEMBL
Match: A0A6J1KF98 (dentin sialophosphoprotein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492713 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 5.5e-32
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 3   VIDVGGKEFRFTWLREVGDLCDVYEERKSGEDGSGLLVESSNAWRKLNVQRILDKSTTNH 62
           VIDVGGKEFRFTW REVGDLCD+YEERKSGEDGSGLLVES NAWRK+NVQRILD+STTNH
Sbjct: 123 VIDVGGKEFRFTWSREVGDLCDIYEERKSGEDGSGLLVESGNAWRKVNVQRILDESTTNH 182

Query: 63  VKKLSEEAERRSKSRR 79
           VKKLSEEAERRSKSRR
Sbjct: 183 VKKLSEEAERRSKSRR 198

[Close]

BLAST of Spg014595.1 vs. ExPASy TrEMBL
Match: A0A6J1KCU5 (dentin sialophosphoprotein isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111492713 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 5.5e-32
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 3   VIDVGGKEFRFTWLREVGDLCDVYEERKSGEDGSGLLVESSNAWRKLNVQRILDKSTTNH 62
           VIDVGGKEFRFTW REVGDLCD+YEERKSGEDGSGLLVES NAWRK+NVQRILD+STTNH
Sbjct: 123 VIDVGGKEFRFTWSREVGDLCDIYEERKSGEDGSGLLVESGNAWRKVNVQRILDESTTNH 182

Query: 63  VKKLSEEAERRSKSRR 79
           VKKLSEEAERRSKSRR
Sbjct: 183 VKKLSEEAERRSKSRR 198

[Close]

BLAST of Spg014595.1 vs. TAIR 10
Match: AT3G21290.1 (dentin sialophosphoprotein-related )

HSP 1 Score: 109.0 bits (271), Expect = 1.9e-24
Identity = 50/76 (65.79%), Postives = 65/76 (85.53%), Query Frame = 0


Query: 3   VIDVGGKEFRFTWLREVGDLCDVYEERKSGEDGSGLLVESSNAWRKLNVQRILDKSTTNH 62
           +I+VGGKEF+FTW  E G+LCD+YEE +SGEDG+GLL+E+  AWRKLNV R LD+STT+H
Sbjct: 130 IINVGGKEFKFTWSGEKGELCDIYEEHQSGEDGNGLLIEAGCAWRKLNVLRTLDESTTSH 189

Query: 63  VKKLSEEAERRSKSRR 79
           +K  S EAE+R+KSR+
Sbjct: 190 MKMRSVEAEQRTKSRK 205

The following BLAST results are available for this feature:

BLAST of Spg014595.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883609.1	3.9e-32	91.03	dentin sialophosphoprotein isoform X2 [Benincasa hispida]	[more]
XP_038883601.1	6.6e-32	93.42	dentin sialophosphoprotein isoform X1 [Benincasa hispida]	[more]
XP_022948918.1	6.6e-32	91.03	dentin sialophosphoprotein isoform X4 [Cucurbita moschata]	[more]
XP_023524754.1	6.6e-32	91.03	dentin sialophosphoprotein-like isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_022997900.1	6.6e-32	91.03	dentin sialophosphoprotein isoform X4 [Cucurbita maxima]	[more]

BLAST of Spg014595.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg014595.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KB65	3.2e-32	91.03	dentin sialophosphoprotein isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC11149271...	[more]
A0A6J1GAM8	3.2e-32	91.03	dentin sialophosphoprotein isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111452...	[more]
A0A6J1K6B7	5.5e-32	93.42	dentin sialophosphoprotein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11149271...	[more]
A0A6J1KF98	5.5e-32	93.42	dentin sialophosphoprotein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11149271...	[more]
A0A6J1KCU5	5.5e-32	93.42	dentin sialophosphoprotein isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC11149271...	[more]

BLAST of Spg014595.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21290.1	1.9e-24	65.79	dentin sialophosphoprotein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR38372	DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN	coord: 2..78

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg014595	Spg014595	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg014595.1-cds	Spg014595.1-cds-scaffold3:43365950..43365955	CDS
Spg014595.1-cds	Spg014595.1-cds-scaffold3:43366293..43366519	CDS
Spg014595.1-cds	Spg014595.1-cds-scaffold3:43367120..43367135	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg014595.1	Spg014595.1-protein	polypeptide