Spg006935.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg006935.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein NRT1/ PTR FAMILY 8.3-like
Location	scaffold10: 40041716 .. 40046342 (-)
Sequence length	456
RNA-Seq Expression	Spg006935.1
Synteny	Spg006935.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTATACGAATCACTTTGCTTCTCCAAATTATCCACCTTGTTATTGCAATCTTTTTGATCGGAGAAATAGAGCAATGGGTTCTCAGGAGGACGACCGAGCAATCTTGGAAGAGGGTCTTTTGCAGGTTTAATCTCTTTCTCTCTCTGTTGTGGTCATCGGAATTTTCGTAATAGGACTGTTTCCTCTAGTGGAATGGTCAAAAGGTGTAAATTACTTGATTCTCGTACGCATATATATTTTGAATCTGTGATTTGATACTTTTTTTCTCTTTTAGACGAAGATCTTGACAATATATGGAAAAGAAACATGGATAACCTTTCAGCGAATTAATTGGTTATGTAATTAAGCAATTTAAGCACTTCATGACCTTAGCGACGCTTACTAAGAAAAAGTTTAATAATAAATTCTGATGAGCTCATTGGGTCTGAAATTGATGTTTATAATTTGTGCATCAGTCGTCTCCTTGTCCGATGAGGATTGTTGAAGCCGTTTATTTCGTTATTTACAGCCAAGTTTTGATAATATGGACGTGTTTATTTTATTTGGAAATGGGTATGTGAAGGCCGATTTAATTTAGCATGATATGGGAGGATTTATCTTTCCCTGTGATTGATTTGCAATAGATAATTTGGGTGTTTACTCATTGGTGAGATCCATGTGAACACATAGGATGCTAATTGTGCAAGCATACGCATACCCATTACTTGAATTCGTTGTAACTCTAACTGACAGTTGTTTGAGTTTTACCTTGTGTCTGTATCTTCGAAGCAGGTTGGATATTGTGTGTTTAAACATGATGTTCTAGGTTGAGTTTAAGTAGGAGGAATTTCTCCAGTTGTGTGGCAGATTGGCCATTGTTAAGTTTAGGTTAAAGGTGAAAGGGATTGGGATGTATAGATATTGATGTTCAGATTTTGGGATAAGGAATGTGCAACTCAACAACATATAACACATGTAAACTTCGTCATCTGTTGGCACAAACATCTACTATTTTGGATTGCTCATTCCAGGACTGATGGAATGAGTATGCTAACTAGTTTCTAGTCCACCTCATGATTGACGTGTATAACATATAGACATTATACTTATGTATTGTAAAGGTACTTTAGTTACATTTTTCTCTAAGCACGTCATATTACATGTGTAATGTTAATATTTTTCATTCACAAGAAACATGTAAGGGTGGTTAGGTTATCTATCCTACACTGCGGGGTCAACACCTACGAATGCTTAAAATTTTGTTTCCTTCTGTAGAATGAAAGCAATGGACTCTATACAGGCGATGGCTCAGTTGACTTCCATGGGAGACCTGTTCTCAAGCAAAATACTGGAAACTGGAAAGCCTGCCCATTCATTCTAGGTTTATTTTTTTGTGCTTTGGTAAAATTAGCATAAATTAGTGACTCAACCTGTAATTCACAATTTAAACTTCAACTTTTAAGATCTATTTAATCTAGCATCACTCTTCCTCTGAAGATTTTGTGTTCCTCCTCTTTGGAGATGTGAACGGATATATTTTCCTGAATGATTTCCCCTTCTTTCTTGTATTTCAAGTCTTGAGAAATTCGAGTAAATTATATTTTTCTTTTTTATTCTTTACTTGACATTTCAAGCCCCTTATTTGTAATACAGGAAATGAAGGCTGCGAACGATTGGCCTACTATGGGATTTCAACTAATCTTGTCACTTATCTTACAAAAAAACTACATCAAGGAAATGTATCGGCTGCTAGAAATGTTACTACTTGGCAAGGAACTTGTTATCTTACACCCCTTATTGGAGCTATCTTGGCAGATGCATACTGGGGGAGATATTGGACCATTGCTACCTTTTCAACAATTTATTTCATTGTATGTTTCATCTGATGTGGATACCCCATCCCCTCTTCCCCAGCATAGATTAGATAGTTAGTATTTCTTTATATTTTTTGCTTTTGCAGGTTATAGTGCTTGGTGTCATGATGTTGTTTATAGATCTTCCTCTGTAACTTTAAGCCCCTTGGTTAACATTTTTTCCCAATACTTTTCCTTAAAGAGTTCTTTTGAATTATGATCTTATTCTCTTGTTGTTCTGTCCTGCCAAATCATGCAACGTTAAGATAATTGAAAAATATTGGTAGACAAAATGGTTGCCTTACACAGTGCAATAAACAATTCATCAAGTAATATGATTTACGGAAAATAATTTAGGGAGGTCATTTGTGGATCAAATTTACTCTATTTTGTTGCATACTATGCACTACCAGTTTCTTCCACCTGCATGCTAATCTCAATATTATCTTTTCAAAGTGCAACTAAAGATGCCGCTTTTCCTTTACAGGGAATGTGCACATTAACTCTCTCTGCATCTGTTCCTGCTCTAAAGCCTGCCGAATGCGTTGGGTTTATGTGCCCCCCAGCTTCTGCTGCTCAGTATATAGTATTTTTCCTCGGACTTTATTTAATTGCCCTTGGGACAGGTGGAATCAAACCATGTGTTTCATCCTTTGGAGCAGATCAGTTTGATGATACTGATCCTGCTGAAAGAGTTAAAAAGGGTTCATTTTTCAATTGGTTTTACTTTTCTATCAATATTGGTGCTCTTATATCAAGTAGTCTCCTGGTTTGGATACAAGACAATGCTGGCTGGGGTCTAGGGTTTGGCATCCCTGCATTATTTATGGGTCTTGCTATCATAAGTTTCTTTTCTGGCACAAAGCTCTACAGATTTCAGAAACCGGGAGGAAGCCCAATTACGAGAATGTGCCAGGTTTTGGTTGCATCCTTTCATAAACGAAATCTAAAGGTTCCTGGTGACAGTAATCTTCTGTATGAGGTGCAAGACAAAAGTTCTGCCATTGAAGGAAGTCGTAAGCTGGACCACAGTGATGAACTTAGGTAACTTTTTTCACAACCTGAGATATTATCTCGTAGCTGCTTTCCAAAATATTTTGTGTTATTCCTTTATTAGATGAGCTTCTTATTATGATGGGGAAGTCTATAATTCACTTCAAATTTTGATTTGCTAATGATGGATCAACGCAGTAAAGCCCTGTTTTTCTTTCAACATTTATGTATTAGCATGTATAGCAGAGGACCAGATCTTCCTCCTCTTCCCAATTCCCAAGCAACTTCTGAAATTGTGTTAGTGGGATCTCTCAAATGATATTTGTGATAGCGATAATCGGCATTAGTTTTTAGTATATTTGCACTTTGAATCAATCTGGTGTGTAGTTATTACATGCAGAAGTATATGTATTTGGTATATGTACATTTGACAGAGTCATGATAGAGTTTATGCATAATTGAACCTGATCTGATCACGTGGATATCTGGTTGGGTAATTAGCAACCTTACTGTTGCACCTTGACCTCTGAAATTTATGTTAGTTATTGTTATGTAGACCTTTCTTCTCAAGAAACAGCATCATTTTGTCTGTAGTAAATCTTGCAATTTAATGAAATTTTACTTGACACGTGCTGTGAAAACTTGATTATGATTGAATTACAAGAAAACCACCACTAATTTGCTATACTTGCATGGAAAATGAATTATTGTTCCCTGTAGAAATTTGGCCATAACTTTATTTGTGCTGCAGATGCCTTGATAAAGCGGCTGTAATCTCTGATGCTGAGTTGAAAAGCGGAGACTTCTCCAATCCATGGAGGCTTTGCACCGTAACACAGGTCGAGGAATTTAAGATTCTTATCCGCATGTTCCCAATATGGGCTACTGGAATCGTCTTTTCAGCCGTATATGCCCAAATGTCCACATTATTCGTGGAACAAGGGACGATGCTGGACAAGACCATTGGTTCTTTCAACATTCCTCCAGCCTCTCTCTCAACCTTCGACGTAGTAAGCGTCATTTTCTGGGTTCCTGTGTATGATAGATTCATAGTCCCAATTGCAAGGAGACTTACAGGAAAGGAGAGAGGATTCACGGAAATACAGCGAATGGGTATCGGCCTGTTTATATCAGTTTTATGCATGTCAGCTGCAGCCTTGGTAGAGATCAAACGACTGGACCTTGCAAGAGAACTTGATTTGGTGCATAAACCAGAGGCTGTACCACTTAGCATACTGTGGCAAATACCACAATATTTCTTGCTAGGTGCAGCAGAAATATTCACATTCATTGGGCAGCTTGAATTTTTCTATGATCAATCTCCAGATGCCATGAGGAGTTTGTGCAGTGCATTGTCTCTGTTGACCACTGCATTGGGAAATTACCTCAGCTCCTTCATTCTAACCATTGTAACTTACTTGACAACAAGAAATGGGCAGGCTGGGTGGATACCAGATAACTTGAATGAGGGCCATTTGGATTTCTTCTTCTGGCTGTTGGCTGGACTGAGCTTCTTGAATTTGTTGGTGTACATTGTCTGTGCCAAACGCTACCGCCCAAAGAAGGCTTCTTAATGTTGAAGGAGATGATGCTGTAACCCAGAAGAGGCCATTTCCAGAAGCAAGCATATTTTGGTCATCATTCTGGTCTACTGTAAATAAATTATAAACGGCCCTCATGTCTCTTTTCTTCTCCTTTTTAACTTCAAATTCATTTTTTACTGTAATATGATGAAAATTTGATGTTATGTGCTTCAAAAAGTATGGATTATCAACTATAATTGTTTTTAGTTTAGTGTTGA

mRNA sequence

ATGGGTTCTCAGGAGGACGACCGAGCAATCTTGGAAGAGGGTCTTTTGCAGAATGAAAGCAATGGACTCTATACAGGCGATGGCTCAGTTGACTTCCATGGGAGACCTGTTCTCAAGCAAAATACTGGAAACTGGAAAGCCTGCCCATTCATTCTAGGTTTATTTTTTTGTGCTTTGGAAATGAAGGCTGCGAACGATTGGCCTACTATGGGATTTCAACTAATCTTGTCACTTATCTTACAAAAAAACTACATCAAGGAAATGTATCGGCTGCTAGAAATGTTACTACTTGGCAAGGAACTTGTTATCTTACACCCCTTATTGGAGCTATCTTGGCAGATGCATACTGGGGGAGATATTGGACCATTGCTACCTTTTCAACAATTTATTTCATTGTATGTTTCATCTGATGTGGATACCCCATCCCCTCTTCCCCAGCATAGATTAGATAGTTAG

Coding sequence (CDS)

ATGGGTTCTCAGGAGGACGACCGAGCAATCTTGGAAGAGGGTCTTTTGCAGAATGAAAGCAATGGACTCTATACAGGCGATGGCTCAGTTGACTTCCATGGGAGACCTGTTCTCAAGCAAAATACTGGAAACTGGAAAGCCTGCCCATTCATTCTAGGTTTATTTTTTTGTGCTTTGGAAATGAAGGCTGCGAACGATTGGCCTACTATGGGATTTCAACTAATCTTGTCACTTATCTTACAAAAAAACTACATCAAGGAAATGTATCGGCTGCTAGAAATGTTACTACTTGGCAAGGAACTTGTTATCTTACACCCCTTATTGGAGCTATCTTGGCAGATGCATACTGGGGGAGATATTGGACCATTGCTACCTTTTCAACAATTTATTTCATTGTATGTTTCATCTGATGTGGATACCCCATCCCCTCTTCCCCAGCATAGATTAGATAGTTAG

Protein sequence

MGSQEDDRAILEEGLLQNESNGLYTGDGSVDFHGRPVLKQNTGNWKACPFILGLFFCALEMKAANDWPTMGFQLILSLILQKNYIKEMYRLLEMLLLGKELVILHPLLELSWQMHTGGDIGPLLPFQQFISLYVSSDVDTPSPLPQHRLDS

Homology

[Close]

BLAST of Spg006935.1 vs. NCBI nr
Match: XP_038875238.1 (protein NRT1/ PTR FAMILY 8.3 [Benincasa hispida])

HSP 1 Score: 114.8 bits (286), Expect = 6.6e-22
Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MGSQEDDRAILEEGLLQNESNGLYTGDGSVDFHGRPVLKQNTGNWKACPFILG 54
          MGSQEDDRAILEEGLLQNESNGLYTGDGSVDFHG PVLKQNTGNWKACPFILG
Sbjct: 1  MGSQEDDRAILEEGLLQNESNGLYTGDGSVDFHGNPVLKQNTGNWKACPFILG 53

[Close]

BLAST of Spg006935.1 vs. NCBI nr
Match: XP_023551576.1 (protein NRT1/ PTR FAMILY 8.3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 112.8 bits (281), Expect = 2.5e-21
Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MGSQEDDRAILEEGLLQNESNGLYTGDGSVDFHGRPVLKQNTGNWKACPFILG 54
          MGSQE+DRAILEEGLLQNESNGLYTGDGSVDFHG PVLKQNTGNWKACPFILG
Sbjct: 1  MGSQENDRAILEEGLLQNESNGLYTGDGSVDFHGNPVLKQNTGNWKACPFILG 53

[Close]

BLAST of Spg006935.1 vs. NCBI nr
Match: XP_022962286.1 (protein NRT1/ PTR FAMILY 8.3-like [Cucurbita moschata] >XP_023543658.1 protein NRT1/ PTR FAMILY 8.3-like [Cucurbita pepo subsp. pepo] >KAG6601908.1 Protein NRT1/ PTR FAMILY 8.3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 112.8 bits (281), Expect = 2.5e-21
Identity = 51/53 (96.23%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MGSQEDDRAILEEGLLQNESNGLYTGDGSVDFHGRPVLKQNTGNWKACPFILG 54
          MGS EDDRAILEEGLLQNESNGLYTGDGSVDFHG PVLKQNTGNWKACPFILG
Sbjct: 1  MGSHEDDRAILEEGLLQNESNGLYTGDGSVDFHGNPVLKQNTGNWKACPFILG 53

[Close]

BLAST of Spg006935.1 vs. NCBI nr
Match: KAG6579166.1 (Protein NRT1/ PTR FAMILY 8.3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 112.8 bits (281), Expect = 2.5e-21
Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MGSQEDDRAILEEGLLQNESNGLYTGDGSVDFHGRPVLKQNTGNWKACPFILG 54
          MGSQE+DRAILEEGLLQNESNGLYTGDGSVDFHG PVLKQNTGNWKACPFILG
Sbjct: 1  MGSQENDRAILEEGLLQNESNGLYTGDGSVDFHGNPVLKQNTGNWKACPFILG 53

[Close]

BLAST of Spg006935.1 vs. NCBI nr
Match: XP_022146405.1 (protein NRT1/ PTR FAMILY 8.3 isoform X1 [Momordica charantia])

HSP 1 Score: 112.8 bits (281), Expect = 2.5e-21
Identity = 52/57 (91.23%), Postives = 53/57 (92.98%), Query Frame = 0


Query: 1  MGSQEDDRAILEEGLLQNESNGLYTGDGSVDFHGRPVLKQNTGNWKACPFILGLFFC 58
          MGSQE DRAILEEGLLQNESNGLYTGDGSVDFHG+PVLKQNTGNWKACPFILG   C
Sbjct: 1  MGSQEGDRAILEEGLLQNESNGLYTGDGSVDFHGKPVLKQNTGNWKACPFILGNECC 57

[Close]

BLAST of Spg006935.1 vs. ExPASy Swiss-Prot
Match: P46032 (Protein NRT1/ PTR FAMILY 8.3 OS=Arabidopsis thaliana OX=3702 GN=NPF8.3 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-11
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 0


Query: 1  MGS-QEDDRAILEEGLLQNESNGLYTGDGSVDFHGRPVLKQNTGNWKACPFILGLFFC 58
          MGS +E+ R ++EEGL+  E   LY  DGSVDF+G P LK+ TGNWKACPFILG   C
Sbjct: 1  MGSIEEEARPLIEEGLILQEVK-LYAEDGSVDFNGNPPLKEKTGNWKACPFILGNECC 57

[Close]

BLAST of Spg006935.1 vs. ExPASy Swiss-Prot
Match: Q84WG0 (Protein NRT1/ PTR FAMILY 8.4 OS=Arabidopsis thaliana OX=3702 GN=NPF8.4 PE=2 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 6.0e-10
Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 1  MGSQEDDRAIL--EEGLLQNESNGLYTGDGSVDFHGRPVLKQNTGNWKACPFILGLFFC 58
          M S +++R++L  EE L+Q E   LY  DGS+D HG P LKQ TGNWKACPFI     C
Sbjct: 1  MASIDEERSLLEVEESLIQEEVK-LYAEDGSIDIHGNPPLKQTTGNWKACPFIFANECC 58

[Close]

BLAST of Spg006935.1 vs. ExPASy Swiss-Prot
Match: Q93Z20 (Protein NRT1/ PTR FAMILY 8.5 OS=Arabidopsis thaliana OX=3702 GN=NPF8.5 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.5e-08
Identity = 34/64 (53.12%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 3  SQEDDRAIL--EEGLL-QNESNGLYTG------DGSVDFHGRPVLKQNTGNWKACPFILG 58
          ++ED+R IL  EE LL Q E N   TG      DGS+D +G P  K+ TGNWKACPFILG
Sbjct: 5  NEEDERRILDVEESLLTQEEVNNHLTGLSSTAEDGSIDIYGNPPSKKKTGNWKACPFILG 64

[Close]

BLAST of Spg006935.1 vs. ExPASy Swiss-Prot
Match: Q9M390 (Protein NRT1/ PTR FAMILY 8.1 OS=Arabidopsis thaliana OX=3702 GN=NPF8.1 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.3e-06
Identity = 22/39 (56.41%), Postives = 25/39 (64.10%), Query Frame = 0


Query: 19 ESNGLYTGDGSVDFHGRPVLKQNTGNWKACPFILGLFFC 58
          E   +YT DG+VD H  P  K+ TGNWKAC FILG   C
Sbjct: 2  EEKDVYTQDGTVDIHKNPANKEKTGNWKACRFILGNECC 40

[Close]

BLAST of Spg006935.1 vs. ExPASy Swiss-Prot
Match: Q8VZR7 (Protein NRT1/ PTR FAMILY 5.1 OS=Arabidopsis thaliana OX=3702 GN=NPF5.1 PE=2 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 1.5e-05
Identity = 20/35 (57.14%), Postives = 25/35 (71.43%), Query Frame = 0


Query: 19 ESNGLYTGDGSVDFHGRPVLKQNTGNWKACPFILG 54
          E+  +YT DG+VD  GRPVL   TG W+AC F+LG
Sbjct: 2  EAAKVYTQDGTVDLQGRPVLASKTGRWRACSFLLG 36

[Close]

BLAST of Spg006935.1 vs. ExPASy TrEMBL
Match: A0A6J1JTA6 (protein NRT1/ PTR FAMILY 8.3-like OS=Cucurbita maxima OX=3661 GN=LOC111487649 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.2e-21
Identity = 51/53 (96.23%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MGSQEDDRAILEEGLLQNESNGLYTGDGSVDFHGRPVLKQNTGNWKACPFILG 54
          MGS EDDRAILEEGLLQNESNGLYTGDGSVDFHG PVLKQNTGNWKACPFILG
Sbjct: 1  MGSHEDDRAILEEGLLQNESNGLYTGDGSVDFHGNPVLKQNTGNWKACPFILG 53

[Close]

BLAST of Spg006935.1 vs. ExPASy TrEMBL
Match: A0A6J1CX66 (protein NRT1/ PTR FAMILY 8.3 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015629 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.2e-21
Identity = 52/57 (91.23%), Postives = 53/57 (92.98%), Query Frame = 0


Query: 1  MGSQEDDRAILEEGLLQNESNGLYTGDGSVDFHGRPVLKQNTGNWKACPFILGLFFC 58
          MGSQE DRAILEEGLLQNESNGLYTGDGSVDFHG+PVLKQNTGNWKACPFILG   C
Sbjct: 1  MGSQEGDRAILEEGLLQNESNGLYTGDGSVDFHGKPVLKQNTGNWKACPFILGNECC 57

[Close]

BLAST of Spg006935.1 vs. ExPASy TrEMBL
Match: A0A6J1FHX5 (protein NRT1/ PTR FAMILY 8.3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445590 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.2e-21
Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MGSQEDDRAILEEGLLQNESNGLYTGDGSVDFHGRPVLKQNTGNWKACPFILG 54
          MGSQE+DRAILEEGLLQNESNGLYTGDGSVDFHG PVLKQNTGNWKACPFILG
Sbjct: 1  MGSQENDRAILEEGLLQNESNGLYTGDGSVDFHGNPVLKQNTGNWKACPFILG 53

[Close]

BLAST of Spg006935.1 vs. ExPASy TrEMBL
Match: A0A6J1HCP4 (protein NRT1/ PTR FAMILY 8.3-like OS=Cucurbita moschata OX=3662 GN=LOC111462778 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.2e-21
Identity = 51/53 (96.23%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MGSQEDDRAILEEGLLQNESNGLYTGDGSVDFHGRPVLKQNTGNWKACPFILG 54
          MGS EDDRAILEEGLLQNESNGLYTGDGSVDFHG PVLKQNTGNWKACPFILG
Sbjct: 1  MGSHEDDRAILEEGLLQNESNGLYTGDGSVDFHGNPVLKQNTGNWKACPFILG 53

[Close]

BLAST of Spg006935.1 vs. ExPASy TrEMBL
Match: A0A5A7VM51 (Protein NRT1/ PTR FAMILY 8.3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00520 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.6e-21
Identity = 51/53 (96.23%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MGSQEDDRAILEEGLLQNESNGLYTGDGSVDFHGRPVLKQNTGNWKACPFILG 54
          MGSQEDDRAILEEGLLQNESN LYTGDGSVDFHG PVLKQNTGNWKACPFILG
Sbjct: 1  MGSQEDDRAILEEGLLQNESNALYTGDGSVDFHGNPVLKQNTGNWKACPFILG 53

[Close]

BLAST of Spg006935.1 vs. TAIR 10
Match: AT2G02040.1 (peptide transporter 2 )

HSP 1 Score: 70.5 bits (171), Expect = 1.3e-12
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 0


Query: 1  MGS-QEDDRAILEEGLLQNESNGLYTGDGSVDFHGRPVLKQNTGNWKACPFILGLFFC 58
          MGS +E+ R ++EEGL+  E   LY  DGSVDF+G P LK+ TGNWKACPFILG   C
Sbjct: 1  MGSIEEEARPLIEEGLILQEVK-LYAEDGSVDFNGNPPLKEKTGNWKACPFILGNECC 57

[Close]

BLAST of Spg006935.1 vs. TAIR 10
Match: AT2G02020.1 (Major facilitator superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 4.3e-11
Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 1  MGSQEDDRAIL--EEGLLQNESNGLYTGDGSVDFHGRPVLKQNTGNWKACPFILGLFFC 58
          M S +++R++L  EE L+Q E   LY  DGS+D HG P LKQ TGNWKACPFI     C
Sbjct: 1  MASIDEERSLLEVEESLIQEEVK-LYAEDGSIDIHGNPPLKQTTGNWKACPFIFANECC 58

[Close]

BLAST of Spg006935.1 vs. TAIR 10
Match: AT2G02020.2 (Major facilitator superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 4.3e-11
Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 1  MGSQEDDRAIL--EEGLLQNESNGLYTGDGSVDFHGRPVLKQNTGNWKACPFILGLFFC 58
          M S +++R++L  EE L+Q E   LY  DGS+D HG P LKQ TGNWKACPFI     C
Sbjct: 1  MASIDEERSLLEVEESLIQEEVK-LYAEDGSIDIHGNPPLKQTTGNWKACPFIFANECC 58

[Close]

BLAST of Spg006935.1 vs. TAIR 10
Match: AT1G62200.1 (Major facilitator superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 1.8e-09
Identity = 34/64 (53.12%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 3  SQEDDRAIL--EEGLL-QNESNGLYTG------DGSVDFHGRPVLKQNTGNWKACPFILG 58
          ++ED+R IL  EE LL Q E N   TG      DGS+D +G P  K+ TGNWKACPFILG
Sbjct: 5  NEEDERRILDVEESLLTQEEVNNHLTGLSSTAEDGSIDIYGNPPSKKKTGNWKACPFILG 64

[Close]

BLAST of Spg006935.1 vs. TAIR 10
Match: AT3G54140.1 (peptide transporter 1 )

HSP 1 Score: 52.4 bits (124), Expect = 3.7e-07
Identity = 22/39 (56.41%), Postives = 25/39 (64.10%), Query Frame = 0


Query: 19 ESNGLYTGDGSVDFHGRPVLKQNTGNWKACPFILGLFFC 58
          E   +YT DG+VD H  P  K+ TGNWKAC FILG   C
Sbjct: 2  EEKDVYTQDGTVDIHKNPANKEKTGNWKACRFILGNECC 40

The following BLAST results are available for this feature:

BLAST of Spg006935.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875238.1	6.6e-22	98.11	protein NRT1/ PTR FAMILY 8.3 [Benincasa hispida]	[more]
XP_023551576.1	2.5e-21	96.23	protein NRT1/ PTR FAMILY 8.3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022962286.1	2.5e-21	96.23	protein NRT1/ PTR FAMILY 8.3-like [Cucurbita moschata] >XP_023543658.1 protein N...	[more]
KAG6579166.1	2.5e-21	96.23	Protein NRT1/ PTR FAMILY 8.3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022146405.1	2.5e-21	91.23	protein NRT1/ PTR FAMILY 8.3 isoform X1 [Momordica charantia]	[more]

BLAST of Spg006935.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46032	1.9e-11	60.34	Protein NRT1/ PTR FAMILY 8.3 OS=Arabidopsis thaliana OX=3702 GN=NPF8.3 PE=1 SV=1	[more]
Q84WG0	6.0e-10	54.24	Protein NRT1/ PTR FAMILY 8.4 OS=Arabidopsis thaliana OX=3702 GN=NPF8.4 PE=2 SV=2	[more]
Q93Z20	2.5e-08	53.13	Protein NRT1/ PTR FAMILY 8.5 OS=Arabidopsis thaliana OX=3702 GN=NPF8.5 PE=2 SV=1	[more]
Q9M390	5.3e-06	56.41	Protein NRT1/ PTR FAMILY 8.1 OS=Arabidopsis thaliana OX=3702 GN=NPF8.1 PE=1 SV=1	[more]
Q8VZR7	1.5e-05	57.14	Protein NRT1/ PTR FAMILY 5.1 OS=Arabidopsis thaliana OX=3702 GN=NPF5.1 PE=2 SV=2	[more]

BLAST of Spg006935.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JTA6	1.2e-21	96.23	protein NRT1/ PTR FAMILY 8.3-like OS=Cucurbita maxima OX=3661 GN=LOC111487649 PE...	[more]
A0A6J1CX66	1.2e-21	91.23	protein NRT1/ PTR FAMILY 8.3 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1FHX5	1.2e-21	96.23	protein NRT1/ PTR FAMILY 8.3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1HCP4	1.2e-21	96.23	protein NRT1/ PTR FAMILY 8.3-like OS=Cucurbita moschata OX=3662 GN=LOC111462778 ...	[more]
A0A5A7VM51	1.6e-21	96.23	Protein NRT1/ PTR FAMILY 8.3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of Spg006935.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02040.1	1.3e-12	60.34	peptide transporter 2	[more]
AT2G02020.1	4.3e-11	54.24	Major facilitator superfamily protein	[more]
AT2G02020.2	4.3e-11	54.24	Major facilitator superfamily protein	[more]
AT1G62200.1	1.8e-09	53.13	Major facilitator superfamily protein	[more]
AT3G54140.1	3.7e-07	56.41	peptide transporter 1	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg006935	Spg006935	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg006935.1-three_prime_utr	Spg006935.1-three_prime_utr-scaffold10:40041716..40042765	three_prime_UTR
Spg006935.1-three_prime_utr	Spg006935.1-three_prime_utr-scaffold10:40043466..40044430	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg006935.1-cds	Spg006935.1-cds-scaffold10:40044431..40044709	CDS
Spg006935.1-cds	Spg006935.1-cds-scaffold10:40044962..40045087	CDS
Spg006935.1-cds	Spg006935.1-cds-scaffold10:40046218..40046268	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg006935.1-five_prime_utr	Spg006935.1-five_prime_utr-scaffold10:40046269..40046342	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg006935.1	Spg006935.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006857	oligopeptide transport
biological_process	GO:0006817	phosphate ion transport
biological_process	GO:0050896	response to stimulus
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009705	plant-type vacuole membrane
molecular_function	GO:0022857	transmembrane transporter activity