Spg006289.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg006289.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RRP15-like protein
Location	scaffold4: 4948996 .. 4953133 (+)
Sequence length	963
RNA-Seq Expression	Spg006289.1
Synteny	Spg006289.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTCTGTTTTATTTATCTATTTATTTATTATAATTTTTTTTAAACTCAGCCCACTTTTTTGATAAGAAAAACAAAATTTGAACCCCCCAAAAAAAAAAAAAAAAAAATTGAGGCCACGTTGTAAAATAAAATAAAAAATAAATAAAAAAAAGAGGAAAACCTAACTCTTTCATCATCTGTGCTCTACGCCACTTCTTCTTCTTCACGCCGTCTCCTCCTCCGTTTCTGCAGCTCAGTGTCGCCGCCGCCTCTCTCCCGTTCACTGCCGCCGTCGTCTTCTTTCTTCCGTTCGTGCCGCAGCAGCCTCCCTCCTAGTGGTTTTGCTCCGGTTTTCTACTTCCTTGTTGTTACTGGTATTCTCTCAATCTCCATCTATGGCTTCCTTCGCACTTGAAAAACACAAATTAGAGCTTTCTAATTAAAGAATGGAGGAGTTTTGATTATTAGTATTATTATTTTTTAATAACAATAGCCGAATAGCAACGAGAAAAAAAAAAAAAAAAAAAACAGCCTTGCGGCAAATTGGGACGTGGTTTGTGTTTGGCTGTTCTGATTCGGGCATGAATCAGTCATCCAATTATCTTTTAGTTCCTAGCTTGATTGCTTGACCGAACAACTTCAACCTATTTATATTTATATTTGAAATTCTCTCCCTCAATTAACCAATACAGTGATCAATGATATTTGAATTTATGGAAATAAGAGCATGAATCCAGACTTCTTTTTTTTTTAATGGGAATACAAATCAGTCACTTTGGGAAGTTCAAACCTGACTAATAACATGAGTCAGTCATATTTTTCAATTATTCATTAGGAGTAATTATTCATTTAAATGATAATGAACTAACCACTGTGTTCTAGGGATGTGGATTATTTTTCTTCCGTAATGTAAAATTCAAGAAATTAAGACATAAGGGTACACAATTTACAGTGAAGGGGTAGACTTGGCACCAAAGTTTCTCCCTTATTGTAAACTGTTTACCATTTTGTTTTAATATAAGAAATTAAGTAGTTGAATTTTACTGTGCCTTTTATATATACTTAGATAAGCTGTGCATTAGAATCAGGTACTATGGCTGAGAACGCAAATGCAGTAGAATCAGTGAGAGGTGTGAAGAGGAGGAAAAAGATGGGTTCCAGGAACAAGAAAAGACCGAGGATGATGGGGGGAAGTGGAAACAAAGTTAAGGTAGATAGGAAGATGAAGAAACTTTTTCAGAAACGGGCTCGTGAGTATAATTCAGATGATGATGATGATAAGGAGGCGGAGGCTCCAGCGGTTGAAGATGATAATAAAGTTTCGGTCCAGAGTCATGAGGAGGAGGTTGGAGATGAAGAGTTTTCGGAAGGTGAAGAAAAGGAAGGGAAGGATTTGAATGCGGATGCGGAGCTTTCTGAAGACGATGAAAATGGTGAAATTCAACCGGGTATAACTAAGTTTACAGAAGGCTGTAGAGCATTCAGAGCTGCTTTCAGGAGTATTCTCAAGAAGAGCATATCTGAAGAAACTCTGGTAGTTTATATCTTACATGTGTTGGAATTATTTTCAATGTGGAAATAATTGTGCCCTATTTGTGTTGCAGGGTCCTATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGCGGAAGGTTAAAGGAGAGGCCAAGAAGGAGAAACTAATGGTATTTCCTTTTAAAATAAAATGCTTTGTGTGTTGTATGATTTAGCTTGCGTAAAATTGGTTGAATGTAAATGTAAATGTCTGAACATTATAGGTGGCAGAAAAAGGCCATGTGAAACCTGCTACTTACTTGGATTTTCATGAAAAGTTTCTTATTGGGGTTGCTACAAAAGGAGGTAGTTTATTGTTTTATCTAAGATGGGAGTGATAATTTCTTTTCCTTCTTGGGCTGGGGTCATTTCATTTCTCATCGTACTGACACTGTTTGCTTATCACCATGTGCATTGCTGCTTGCTGGATTGTCAGTCGTCAAGTTGTTTAATGCTGTAAGTAGCCTTTTTTTTTTTTATTTAAAATTTCAGACAACTTTTCTTTTTTTGTTTTTTTCACATCTCCTCATCTGTGTTGCACTTATAGCTGAATTCTCTTAATTTGATATGATTCAGGTCAACAAGGCACAACATGCCCAGAAGGGTTTGAATCCTTCGAGAGCTAAAGATGCTAAAGGTATTATGCCTCCATGTAACTTTGATCTCAAAAGAAGTTAACAAAATCTAAAATTGTGTAGAAGTAATGTAATTCTCACCTTTTTTTTTCTTGTAAATATGCTGTCCCTAAATTTTCATTCGATTAATTTGGTTTGATTCTGTTGTCTGTGCCTGGTGCATTGTATCAAATCTTGTATCTTAATTTTCCAAGTCGTATATGTATATTTTATATTTTGTTTTTGGGTTTCTGCTTTGTCCTTGATGAAAAATCATTTTGTTTAGTATGCCAACATATAAGTAATGAGTCATATGCACCTTTACTAATCTATTGACTTTGATTGGAAAAAACATGTGTAATTGGAATAACCAGTGATTTAAAAGGCTTGTGCCTTGGATTTTATTGCTCTATTAGTTTCACATGTAGTCATGTTTGCTCTGAGTCAACTGATGCCTTCCACTGTTGGCTTATAGGGCCAGGGTTATCTCTTGTTTAGCATAACATTGCTAGACCTATTATGTTTGCGCATTAGGAAACTTATCCTTTCTTTCTTAACTTGTGATTATGTGGGGGACCTATTCAAGATTGAGGAACAATAGGATTTTTAAAGGGAAAAAGAAGTTGAGTGGGGAGGTTTGAGAGGGTGTCAGGTTTAATGCTTTTTTTATGTGTGTCGGTCACTAGGCCGTTTTGTAATTATGATCTTGGTCTTGTTCTTTGGATTGAAGTTCCTTTTTGTAGTTAGCTTTGGACTCCCGTTTCTTTTGGATTTGTTTTTTTGTAAACACTTGTATTCTTTAATTTGTGCGATGGAAGTTTGGTTTCTTAAAAAGAAGAAGATTGAATGTGAACTTTGAAACCATGTCTTACATTTTCAGTCTATCCGGCCTCATTCTGAGTAATTTATTTGGTTTATACTGCCAGCTATAAATAAGCGGAGGAAAGAAGCTTTCTTTTCTGAGTTGGGCAAGACAACTTTGTCAGCCACAAACAGTAATGCAAAGGTTAGTTATTTTCCTACTTTTTATGTCTTCCTATTTCTACCATAGAATTTGATCAATTTATTAACTTTTAACACAAGTATCGGTAAATTCTTCTTTTAATCTCTTACAATTGATGTTACTTTTTACAAACACCTGAGACTGTGCACCAGGAAGGGAGGTGTATGCGTATGTTGGTTAAAAGGGAGTGAAATCCACGTCACCATCAAATATTATCTGTTTCTTCATGTCGATAATGAATTCAAATGGCCATCTCTATGTTGAACAGGGAAACACATCAGGTGGTGCAGCGGACGCTGAAGGGCCTGCCTGGGCTCCATTACGTGATAATTATATGCTAACCAATTCCAAGTTAAAAGACTGGGATAAGATGCCGGTAAGATATACTTTCAAAGCCTAATGACCATTGCGCCTTTGTTTCTTTTGGCTCCAATTATCATATCATTGTGATCGATTATACTTGTAGGATAATACGACGATAGCCGAGGACAATGGGAGGATGTTGGGAGACAGTAGTTCAGACGACGATGATTGATGGGTCTAGCCCTTCAAGTGAATTTCGTAACTGTTGTAGCTTTCAGGTAGCCGATACTTCACAAAGCTGGGTTCCATTTTGGCTTCCTATGCCCCAATCGTTTTCCTTCATGTGGTGGCGAATTCACCAAGTATGCCTCAGCTATATGTTATTGAGCCTAAAAAATCTTCCCCTCTATTTCTTTGTCCAATTCTTAGTTTGTGCCCTCCAGTGAGAAGATTTAACTGTATAAATGTCGTCCATTCTGTCGAGTTTGTAGGATTTTCAAGCAAATTGGTGGAAAGATGAAAATTTTGGTCTTCATTTGTATGGATTGCTCAAATAGTTACAGAGGAACGTGTTCATGTTAATTTACTTATTGAAATTTGTTTAACCTACAAACACTCGCTGTAAAGTTCTCATTTGTTGATGCCGGTTTCGAGCACAAATT

mRNA sequence

ATGGCTGAGAACGCAAATGCAGTAGAATCAGTGAGAGGTGTGAAGAGGAGGAAAAAGATGGGTTCCAGGAACAAGAAAAGACCGAGGATGATGGGGGGAAGTGGAAACAAAGTTAAGGTAGATAGGAAGATGAAGAAACTTTTTCAGAAACGGGCTCGTGAGTATAATTCAGATGATGATGATGATAAGGAGGCGGAGGCTCCAGCGGTTGAAGATGATAATAAAGTTTCGGTCCAGAGTCATGAGGAGGAGGTTGGAGATGAAGAGTTTTCGGAAGGTGAAGAAAAGGAAGGGAAGGATTTGAATGCGGATGCGGAGCTTTCTGAAGACGATGAAAATGGTGAAATTCAACCGGGTATAACTAAGTTTACAGAAGGCTGTAGAGCATTCAGAGCTGCTTTCAGGAGTATTCTCAAGAAGAGCATATCTGAAGAAACTCTGGGTCCTATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGCGGAAGGTTAAAGGAGAGGCCAAGAAGGAGAAACTAATGGTGGCAGAAAAAGGCCATGTGAAACCTGCTACTTACTTGGATTTTCATGAAAAGTTTCTTATTGGGGTTGCTACAAAAGGAGTCGTCAAGTTGTTTAATGCTGTCAACAAGGCACAACATGCCCAGAAGGGTTTGAATCCTTCGAGAGCTAAAGATGCTAAAGCTATAAATAAGCGGAGGAAAGAAGCTTTCTTTTCTGAGTTGGGCAAGACAACTTTGTCAGCCACAAACAGTAATGCAAAGGGAAACACATCAGGTGGTGCAGCGGACGCTGAAGGGCCTGCCTGGGCTCCATTACGTGATAATTATATGCTAACCAATTCCAAGTTAAAAGACTGGGATAAGATGCCGGATAATACGACGATAGCCGAGGACAATGGGAGGATGTTGGGAGACAGTAGTTCAGACGACGATGATTGA

Coding sequence (CDS)

ATGGCTGAGAACGCAAATGCAGTAGAATCAGTGAGAGGTGTGAAGAGGAGGAAAAAGATGGGTTCCAGGAACAAGAAAAGACCGAGGATGATGGGGGGAAGTGGAAACAAAGTTAAGGTAGATAGGAAGATGAAGAAACTTTTTCAGAAACGGGCTCGTGAGTATAATTCAGATGATGATGATGATAAGGAGGCGGAGGCTCCAGCGGTTGAAGATGATAATAAAGTTTCGGTCCAGAGTCATGAGGAGGAGGTTGGAGATGAAGAGTTTTCGGAAGGTGAAGAAAAGGAAGGGAAGGATTTGAATGCGGATGCGGAGCTTTCTGAAGACGATGAAAATGGTGAAATTCAACCGGGTATAACTAAGTTTACAGAAGGCTGTAGAGCATTCAGAGCTGCTTTCAGGAGTATTCTCAAGAAGAGCATATCTGAAGAAACTCTGGGTCCTATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGCGGAAGGTTAAAGGAGAGGCCAAGAAGGAGAAACTAATGGTGGCAGAAAAAGGCCATGTGAAACCTGCTACTTACTTGGATTTTCATGAAAAGTTTCTTATTGGGGTTGCTACAAAAGGAGTCGTCAAGTTGTTTAATGCTGTCAACAAGGCACAACATGCCCAGAAGGGTTTGAATCCTTCGAGAGCTAAAGATGCTAAAGCTATAAATAAGCGGAGGAAAGAAGCTTTCTTTTCTGAGTTGGGCAAGACAACTTTGTCAGCCACAAACAGTAATGCAAAGGGAAACACATCAGGTGGTGCAGCGGACGCTGAAGGGCCTGCCTGGGCTCCATTACGTGATAATTATATGCTAACCAATTCCAAGTTAAAAGACTGGGATAAGATGCCGGATAATACGACGATAGCCGAGGACAATGGGAGGATGTTGGGAGACAGTAGTTCAGACGACGATGATTGA

Protein sequence

MAENANAVESVRGVKRRKKMGSRNKKRPRMMGGSGNKVKVDRKMKKLFQKRAREYNSDDDDDKEAEAPAVEDDNKVSVQSHEEEVGDEEFSEGEEKEGKDLNADAELSEDDENGEIQPGITKFTEGCRAFRAAFRSILKKSISEETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKLMVAEKGHVKPATYLDFHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAINKRRKEAFFSELGKTTLSATNSNAKGNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTTIAEDNGRMLGDSSSDDDD

Homology

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BLAST of Spg006289.1 vs. NCBI nr
Match: XP_038888922.1 (RRP15-like protein [Benincasa hispida] >XP_038888940.1 RRP15-like protein [Benincasa hispida])

HSP 1 Score: 506.9 bits (1304), Expect = 1.3e-139
Identity = 283/321 (88.16%), Postives = 296/321 (92.21%), Query Frame = 0


Query: 1   MAENANAVESVRGVKRRKKMGSRNKKRPRMMGGSGNKVKVDRKMKKLFQKRAREYNSDDD 60
           MA+  NAVE VRG KRRKKMGSRN KRPRMMGGSGNKVKVDRKMKKLFQKRAREYNS+DD
Sbjct: 1   MADVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKVDRKMKKLFQKRAREYNSEDD 60

Query: 61  DDKEAEAPAVEDDNKVSVQSHEEEVGDEEFSEGEEKEGKDLNADAELSEDDENGEIQPGI 120
           D+ E +AP VE++ KV V SH EEVGDEEFSEGE+ EGKD+NAD ELSEDDENGEIQPGI
Sbjct: 61  DNDE-KAPMVENERKVLVCSHAEEVGDEEFSEGED-EGKDVNADVELSEDDENGEIQPGI 120

Query: 121 TKFTEGCRAFRAAFRSILKKSISEETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKL 180
           TKF EGCRAFRAAFRSILKKSIS+ETLGPILSANKKL+ EKLAEEEAERKVKG AKKEK 
Sbjct: 121 TKFAEGCRAFRAAFRSILKKSISDETLGPILSANKKLIVEKLAEEEAERKVKGLAKKEKQ 180

Query: 181 MVAEKGHVKPATYLDFHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAINKR 240
           +V EKGHVKPATYLD HEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSR KDAKAINKR
Sbjct: 181 LVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKR 240

Query: 241 RKEAFFSELGKTTLSATNSNAKGNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDN 300
           RKEAFFSELGK TLSATNSNAK NTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDN
Sbjct: 241 RKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDN 300

Query: 301 -TTIAEDNGRMLGDSSSDDDD 321
            TT+AEDNGRML DSSSD+DD
Sbjct: 301 MTTMAEDNGRMLEDSSSDEDD 319

[Close]

BLAST of Spg006289.1 vs. NCBI nr
Match: XP_004144556.1 (RRP15-like protein [Cucumis sativus] >XP_011658649.1 RRP15-like protein [Cucumis sativus] >KGN43394.1 hypothetical protein Csa_020346 [Cucumis sativus])

HSP 1 Score: 502.3 bits (1292), Expect = 3.1e-138
Identity = 277/321 (86.29%), Postives = 293/321 (91.28%), Query Frame = 0


Query: 1   MAENANAVESVRGVKRRKKMGSRNKKRPRMMGGSGNKVKVDRKMKKLFQKRAREYNSDDD 60
           M +  NAVE VRG KRRKKMGSRN KRPRMMGGSGNKVK+D+KMKKLFQKRAREYNSDDD
Sbjct: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60

Query: 61  DDKEAEAPAVEDDNKVSVQSHEEEVGDEEFSEGEEKEGKDLNADAELSEDDENGEIQPGI 120
           DD   +AP V+ ++K+ V+SHEEEVGDEEFSEGEE E KD+NAD ELSEDDENGEIQPGI
Sbjct: 61  DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEE-ERKDVNADVELSEDDENGEIQPGI 120

Query: 121 TKFTEGCRAFRAAFRSILKKSISEETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKL 180
           TKFTEGCRAFRAAF SILKK+IS+ETLGPILSANKKLVAEKLAEEEAERKVKGEA+K K 
Sbjct: 121 TKFTEGCRAFRAAFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQ 180

Query: 181 MVAEKGHVKPATYLDFHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAINKR 240
           +V EKGHVKPATYLD HEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSR KDAKAINKR
Sbjct: 181 LVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKR 240

Query: 241 RKEAFFSELGKTTLSATNSNAKGNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDN 300
           RKEAFFSELGK TLSATNSNAK NTSGGAAD EGPAWAPLRDNYMLTNSKLKDWDKMPDN
Sbjct: 241 RKEAFFSELGKPTLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNSKLKDWDKMPDN 300

Query: 301 -TTIAEDNGRMLGDSSSDDDD 321
             T AEDNGR+L DSSSD+DD
Sbjct: 301 MMTAAEDNGRVLEDSSSDEDD 320

[Close]

BLAST of Spg006289.1 vs. NCBI nr
Match: XP_008462030.1 (PREDICTED: RRP15-like protein [Cucumis melo])

HSP 1 Score: 500.0 bits (1286), Expect = 1.5e-137
Identity = 276/321 (85.98%), Postives = 293/321 (91.28%), Query Frame = 0


Query: 1   MAENANAVESVRGVKRRKKMGSRNKKRPRMMGGSGNKVKVDRKMKKLFQKRAREYNSDDD 60
           M +  NA+E VRG KRRKKMGSRNKKRPRMMGGSGNK KVD+KMKKLFQKRAREYNSDDD
Sbjct: 1   MTDVGNAIELVRGAKRRKKMGSRNKKRPRMMGGSGNKAKVDKKMKKLFQKRAREYNSDDD 60

Query: 61  DDKEAEAPAVEDDNKVSVQSHEEEVGDEEFSEGEEKEGKDLNADAELSEDDENGEIQPGI 120
           D+   +AP V++++K+ V SHEEEVGDEE SEGEE E KD+NAD ELSEDDENGEIQPGI
Sbjct: 61  DNDGEKAPTVKNESKILVHSHEEEVGDEELSEGEE-ERKDVNADVELSEDDENGEIQPGI 120

Query: 121 TKFTEGCRAFRAAFRSILKKSISEETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKL 180
           TKFTEGCRAFRAAF SILKK+IS+ETLGPILSANKKLVAEKLAEEEAERKVKGEA+K K 
Sbjct: 121 TKFTEGCRAFRAAFISILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQ 180

Query: 181 MVAEKGHVKPATYLDFHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAINKR 240
           +V EKGHVKPATYLD HEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSR KDAKAINKR
Sbjct: 181 LVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKR 240

Query: 241 RKEAFFSELGKTTLSATNSNAKGNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDN 300
           RKEAFFSELGK TLSATNSNAK NTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDN
Sbjct: 241 RKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDN 300

Query: 301 -TTIAEDNGRMLGDSSSDDDD 321
             T AEDNGR+L DSSSD+DD
Sbjct: 301 MMTAAEDNGRVLEDSSSDEDD 320

[Close]

BLAST of Spg006289.1 vs. NCBI nr
Match: TYK03372.1 (RRP15-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 495.7 bits (1275), Expect = 2.9e-136
Identity = 274/321 (85.36%), Postives = 292/321 (90.97%), Query Frame = 0


Query: 1   MAENANAVESVRGVKRRKKMGSRNKKRPRMMGGSGNKVKVDRKMKKLFQKRAREYNSDDD 60
           M +  NA+E VRG KRRKKMGSRNKKRPR+MGGSGNK KVD+KMKKLFQKRAREYNSDDD
Sbjct: 1   MTDVGNAIELVRGAKRRKKMGSRNKKRPRIMGGSGNKAKVDKKMKKLFQKRAREYNSDDD 60

Query: 61  DDKEAEAPAVEDDNKVSVQSHEEEVGDEEFSEGEEKEGKDLNADAELSEDDENGEIQPGI 120
            +   +AP V++++K+ V SHEEEVGDEE SEGEE E KD+NAD ELSEDDENGEIQPGI
Sbjct: 61  GNDGEKAPTVKNESKILVHSHEEEVGDEELSEGEE-ERKDVNADVELSEDDENGEIQPGI 120

Query: 121 TKFTEGCRAFRAAFRSILKKSISEETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKL 180
           TKFTEGCRAFRAAF SILKK+IS+ETLGPILSANKKLVAEKLAEEEAERKVKGEA+K K 
Sbjct: 121 TKFTEGCRAFRAAFISILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQ 180

Query: 181 MVAEKGHVKPATYLDFHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAINKR 240
           +V EKGHVKPATYLD HEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSR KDAKAINKR
Sbjct: 181 LVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKR 240

Query: 241 RKEAFFSELGKTTLSATNSNAKGNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDN 300
           RKEAFFSELGK TLSATNSNAK NTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDN
Sbjct: 241 RKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDN 300

Query: 301 -TTIAEDNGRMLGDSSSDDDD 321
             T AEDNGR+L DSSSD+DD
Sbjct: 301 MMTAAEDNGRVLEDSSSDEDD 320

[Close]

BLAST of Spg006289.1 vs. NCBI nr
Match: XP_022928388.1 (RRP15-like protein [Cucurbita moschata])

HSP 1 Score: 492.7 bits (1267), Expect = 2.5e-135
Identity = 272/314 (86.62%), Postives = 292/314 (92.99%), Query Frame = 0


Query: 9   ESVRGVKRRKKMGSRNKKRPRMMGGSGNKVKVDRKMKKLFQKRAREYNSDDDDD--KEAE 68
           E +RG KR KK+GSRNKKRPRMMGGSGNKVK+DRKM+KLF+KRAREYNSDD+DD    A 
Sbjct: 6   ELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDDTNTAA 65

Query: 69  APAVEDDNKVSVQSHEEEVGDEEFSEGEEKEGKDLNADAELSEDDENGEIQPGITKFTEG 128
           APAV D++KVS + + EEV DEEFSEGEE+EG D+N+DA LSEDDE+G +QPGITKF EG
Sbjct: 66  APAVGDESKVS-EHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITKFIEG 125

Query: 129 CRAFRAAFRSILKKSISEETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKLMVAEKG 188
           CRAFRAAFRSILKKSIS+ETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEK ++AEKG
Sbjct: 126 CRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLLAEKG 185

Query: 189 HVKPATYLDFHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAINKRRKEAFF 248
           HVKPATYLD HEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAI+KRRKEAFF
Sbjct: 186 HVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRKEAFF 245

Query: 249 SELGKTTLSATNSNAKGNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTTIAED 308
           SELGK TLSATNSNAKGNTSG AA+AEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT AED
Sbjct: 246 SELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTTKAED 305

Query: 309 NGRMLGDSSSDDDD 321
           NGRMLGDSSSDDDD
Sbjct: 306 NGRMLGDSSSDDDD 318

[Close]

BLAST of Spg006289.1 vs. ExPASy Swiss-Prot
Match: Q3T062 (RRP15-like protein OS=Bos taurus OX=9913 GN=RRP15 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 5.7e-10
Identity = 99/297 (33.33%), Postives = 139/297 (46.80%), Query Frame = 0


Query: 34  SGNKVKVDRKMKKLFQKRAREYNSDDDDDKEAEAPAVEDDNKVSVQSHEEEVGDEEFSEG 93
           +G K+K+  + K++    A   +  +D DK+A       DN+ S+ S   E   + FS G
Sbjct: 12  AGKKLKISLRKKRMKMVVASVASELEDKDKDA------SDNEGSLGSCGLE--KDHFSSG 71

Query: 94  EEKEGKDLNADAELSEDDENGEIQPGITKFTEGCRA-FRAAFRSILKKSISEETLGPILS 153
           +E    D   +AE  EDD +   +      T G  A +  A   IL K I  E+   IL 
Sbjct: 72  DEAVEADNEDEAEPREDDNDSAAEA-----TAGANAGWADAMARILSKKI-PESKPTILV 131

Query: 154 ANKKL--VAEKLAEEEAERKVKGEAKKEKLMVAEKGHVKPATYLDFH-EKFLIGVATKGV 213
            NK+L    EKL +E  E++ + + K+E  M+     VKP    D   E+ L  +AT+GV
Sbjct: 132 RNKELEKEKEKLKQERLEKRKQLDKKREWEMMC---RVKPDVVKDKETERNLQRIATRGV 191

Query: 214 VKLFNAVNKAQ----HAQKGLNPSRAKDAKAINKRRKEAFFSELGKTTLSATNSNAKGNT 273
           V+LFNAV K Q       K    S  K AK I+   K+ F S L     SA+  N+ G  
Sbjct: 192 VQLFNAVQKHQKNVDEKVKEAGGSIRKRAKLISSVSKKDFISVLRGMDGSASEKNSAGKN 251

Query: 274 SGG----AADAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTTIAEDNGRMLGDSSSDD 319
           S      A   EGP W  LRD++M+  + +KDWDK  D       +G  LG  S  D
Sbjct: 252 SKAKQTEAKSEEGPGWTILRDDFMM-GASMKDWDKESDG-----PDGSRLGCGSDSD 285

[Close]

BLAST of Spg006289.1 vs. ExPASy Swiss-Prot
Match: Q5M947 (RRP15-like protein OS=Rattus norvegicus OX=10116 GN=Rrp15 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.1e-05
Identity = 80/275 (29.09%), Postives = 128/275 (46.55%), Query Frame = 0


Query: 35  GNKVKVDRKMKKLFQKRAREYNSDDDDDKEAEAPAVEDDNKVSVQSHEEEVGDEEFSEGE 94
           G K+K   K KK  +K A+           A    +ED+ K       +  G E   E E
Sbjct: 13  GGKLKRSPKKKKKMKKVAK-----------AAVSKLEDELK-------DSSGGEGSCESE 72

Query: 95  EKEGKDLNADAELSEDDENGEIQPGITKFTEGCRAFRAAFRSILKKSISEET---LGPIL 154
             +  D  A+A+  ++ E+ E +  +    E      + +   + K ++++T      IL
Sbjct: 73  MDDSDDGAAEADSEDNVESCEEENEVA--AESSAGTNSGWADAMAKILNKKTPKSKPTIL 132

Query: 155 SANKKL--VAEKLAEEEAERKVKGEAKKEKLMVAEKGHVKPATYLDFH-EKFLIGVATKG 214
           + NK+L    EKL +E  E++ + + K+E  M+     VKP    D   E+ L  +AT+G
Sbjct: 133 TKNKELEKEKEKLKQERLEKRKQIDKKREWEMLC---RVKPDVIKDKEAERNLQRIATRG 192

Query: 215 VVKLFNAVNKAQ----HAQKGLNPSRAKDAKAINKRRKEAFFSELGKTTLSATNSNAKGN 274
           VV+LFNAV K Q       K +  S  K AK ++   K+ F S L     ++ NS+A  +
Sbjct: 193 VVQLFNAVQKHQRNVDEKVKEVGGSIRKRAKLMSTVSKKDFISVLRGMDGASENSSAGKS 252

Query: 275 TSGGAADA---EGPAWAPLRDNYMLTNSKLKDWDK 297
                 +    EGP W  LRD++M+  + +KDWDK
Sbjct: 253 PKARQTEVKSEEGPGWKILRDDFMM-GASMKDWDK 263

[Close]

BLAST of Spg006289.1 vs. ExPASy Swiss-Prot
Match: Q9CYX7 (RRP15-like protein OS=Mus musculus OX=10090 GN=Rrp15 PE=1 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 2.5e-05
Identity = 70/237 (29.54%), Postives = 107/237 (45.15%), Query Frame = 0


Query: 75  KVSVQSHEEEVGDEEFSEGEEKEGKDLNAD--AELSEDDENGEIQPGITKFTEGCRAFRA 134
           K +    E+EV D    EG      D + D  AE   +D     +       E      +
Sbjct: 31  KAAASKLEDEVKDSSDGEGSCDSEMDHSDDGAAEADSEDNVESCEEDNEDAAESSAGTNS 90

Query: 135 AFRSILKKSISEET---LGPILSANKKL--VAEKLAEEEAERKVKGEAKKEKLMVAEKGH 194
            +   + K ++++T      IL+ NK+L    EKL +E  E++ + + K+E  M+     
Sbjct: 91  GWADAMAKILNKKTPKSKATILTKNKELEKEKEKLKQERLEKRKQLDKKREWEMLC---R 150

Query: 195 VKPATYLDFH-EKFLIGVATKGVVKLFNAVNKAQ----HAQKGLNPSRAKDAKAINKRRK 254
           VKP    D   E+ L  +AT+GVV+LFNAV K Q       K    S  K AK ++   K
Sbjct: 151 VKPDVVKDKEAERNLQRIATRGVVQLFNAVQKHQRNVGEKVKEAGGSVRKRAKLMSTVSK 210

Query: 255 EAFFSELGKTTLSATNSNAKGNTSGGAADA---EGPAWAPLRDNYMLTNSKLKDWDK 297
           + F S L     ++ NS A  +      +    E P W  LRD++M+  + +KDWDK
Sbjct: 211 KDFISVLRGMDGTSRNSPAGKSPKARQTEVKSEESPGWKILRDDFMM-GASMKDWDK 263

[Close]

BLAST of Spg006289.1 vs. ExPASy Swiss-Prot
Match: Q9Y3B9 (RRP15-like protein OS=Homo sapiens OX=9606 GN=RRP15 PE=1 SV=2)

HSP 1 Score: 50.4 bits (119), Expect = 4.3e-05
Identity = 83/258 (32.17%), Postives = 115/258 (44.57%), Query Frame = 0


Query: 82  EEEVGDEEFSEGEEKEGKD-LNADAELSEDDENGEIQPGITKFTEG--------CRAFRA 141
           E+E  D   SEG     KD   +D +  E D  G+ +P   K  E            +  
Sbjct: 36  EDEATDTSDSEGSCGSEKDHFYSDDDAIEADSEGDAEP-CDKENENDGESSVGTNMGWAD 95

Query: 142 AFRSILKKSISEETLGPILSANKKL--VAEKLAEEEAERKVKGEAKKEKLMVAEKGHVKP 201
           A   +L K  + E+   IL  NKKL    EKL +E  E+  + + + E  M+     VKP
Sbjct: 96  AMAKVLNKK-TPESKPTILVKNKKLEKEKEKLKQERLEKIKQRDKRLEWEMMC---RVKP 155

Query: 202 ATYLDFH-EKFLIGVATKGVVKLFNAVNKAQ----HAQKGLNPSRAKDAKAINKRRKEAF 261
               D   E+ L  +AT+GVV+LFNAV K Q       K    S  K AK I+   K+ F
Sbjct: 156 DVVQDKETERNLQRIATRGVVQLFNAVQKHQKNVDEKVKEAGSSMRKRAKLISTVSKKDF 215

Query: 262 FSEL----GKTTLSATNSNAKGNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDNT 320
            S L    G T  +A++              EGP W  LRD++M+  + +KDWDK  D  
Sbjct: 216 ISVLRGMDGSTNETASSRKKPKAKQTEVKSEEGPGWTILRDDFMM-GASMKDWDKESD-- 275

[Close]

BLAST of Spg006289.1 vs. ExPASy TrEMBL
Match: A0A0A0K320 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031550 PE=3 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.5e-138
Identity = 277/321 (86.29%), Postives = 293/321 (91.28%), Query Frame = 0


Query: 1   MAENANAVESVRGVKRRKKMGSRNKKRPRMMGGSGNKVKVDRKMKKLFQKRAREYNSDDD 60
           M +  NAVE VRG KRRKKMGSRN KRPRMMGGSGNKVK+D+KMKKLFQKRAREYNSDDD
Sbjct: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60

Query: 61  DDKEAEAPAVEDDNKVSVQSHEEEVGDEEFSEGEEKEGKDLNADAELSEDDENGEIQPGI 120
           DD   +AP V+ ++K+ V+SHEEEVGDEEFSEGEE E KD+NAD ELSEDDENGEIQPGI
Sbjct: 61  DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEE-ERKDVNADVELSEDDENGEIQPGI 120

Query: 121 TKFTEGCRAFRAAFRSILKKSISEETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKL 180
           TKFTEGCRAFRAAF SILKK+IS+ETLGPILSANKKLVAEKLAEEEAERKVKGEA+K K 
Sbjct: 121 TKFTEGCRAFRAAFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQ 180

Query: 181 MVAEKGHVKPATYLDFHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAINKR 240
           +V EKGHVKPATYLD HEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSR KDAKAINKR
Sbjct: 181 LVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKR 240

Query: 241 RKEAFFSELGKTTLSATNSNAKGNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDN 300
           RKEAFFSELGK TLSATNSNAK NTSGGAAD EGPAWAPLRDNYMLTNSKLKDWDKMPDN
Sbjct: 241 RKEAFFSELGKPTLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNSKLKDWDKMPDN 300

Query: 301 -TTIAEDNGRMLGDSSSDDDD 321
             T AEDNGR+L DSSSD+DD
Sbjct: 301 MMTAAEDNGRVLEDSSSDEDD 320

[Close]

BLAST of Spg006289.1 vs. ExPASy TrEMBL
Match: A0A1S3CFX9 (RRP15-like protein OS=Cucumis melo OX=3656 GN=LOC103500496 PE=3 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 7.5e-138
Identity = 276/321 (85.98%), Postives = 293/321 (91.28%), Query Frame = 0


Query: 1   MAENANAVESVRGVKRRKKMGSRNKKRPRMMGGSGNKVKVDRKMKKLFQKRAREYNSDDD 60
           M +  NA+E VRG KRRKKMGSRNKKRPRMMGGSGNK KVD+KMKKLFQKRAREYNSDDD
Sbjct: 1   MTDVGNAIELVRGAKRRKKMGSRNKKRPRMMGGSGNKAKVDKKMKKLFQKRAREYNSDDD 60

Query: 61  DDKEAEAPAVEDDNKVSVQSHEEEVGDEEFSEGEEKEGKDLNADAELSEDDENGEIQPGI 120
           D+   +AP V++++K+ V SHEEEVGDEE SEGEE E KD+NAD ELSEDDENGEIQPGI
Sbjct: 61  DNDGEKAPTVKNESKILVHSHEEEVGDEELSEGEE-ERKDVNADVELSEDDENGEIQPGI 120

Query: 121 TKFTEGCRAFRAAFRSILKKSISEETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKL 180
           TKFTEGCRAFRAAF SILKK+IS+ETLGPILSANKKLVAEKLAEEEAERKVKGEA+K K 
Sbjct: 121 TKFTEGCRAFRAAFISILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQ 180

Query: 181 MVAEKGHVKPATYLDFHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAINKR 240
           +V EKGHVKPATYLD HEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSR KDAKAINKR
Sbjct: 181 LVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKR 240

Query: 241 RKEAFFSELGKTTLSATNSNAKGNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDN 300
           RKEAFFSELGK TLSATNSNAK NTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDN
Sbjct: 241 RKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDN 300

Query: 301 -TTIAEDNGRMLGDSSSDDDD 321
             T AEDNGR+L DSSSD+DD
Sbjct: 301 MMTAAEDNGRVLEDSSSDEDD 320

[Close]

BLAST of Spg006289.1 vs. ExPASy TrEMBL
Match: A0A5D3BX18 (RRP15-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84663G00070 PE=3 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 1.4e-136
Identity = 274/321 (85.36%), Postives = 292/321 (90.97%), Query Frame = 0


Query: 1   MAENANAVESVRGVKRRKKMGSRNKKRPRMMGGSGNKVKVDRKMKKLFQKRAREYNSDDD 60
           M +  NA+E VRG KRRKKMGSRNKKRPR+MGGSGNK KVD+KMKKLFQKRAREYNSDDD
Sbjct: 1   MTDVGNAIELVRGAKRRKKMGSRNKKRPRIMGGSGNKAKVDKKMKKLFQKRAREYNSDDD 60

Query: 61  DDKEAEAPAVEDDNKVSVQSHEEEVGDEEFSEGEEKEGKDLNADAELSEDDENGEIQPGI 120
            +   +AP V++++K+ V SHEEEVGDEE SEGEE E KD+NAD ELSEDDENGEIQPGI
Sbjct: 61  GNDGEKAPTVKNESKILVHSHEEEVGDEELSEGEE-ERKDVNADVELSEDDENGEIQPGI 120

Query: 121 TKFTEGCRAFRAAFRSILKKSISEETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKL 180
           TKFTEGCRAFRAAF SILKK+IS+ETLGPILSANKKLVAEKLAEEEAERKVKGEA+K K 
Sbjct: 121 TKFTEGCRAFRAAFISILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQ 180

Query: 181 MVAEKGHVKPATYLDFHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAINKR 240
           +V EKGHVKPATYLD HEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSR KDAKAINKR
Sbjct: 181 LVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKR 240

Query: 241 RKEAFFSELGKTTLSATNSNAKGNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDN 300
           RKEAFFSELGK TLSATNSNAK NTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDN
Sbjct: 241 RKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDN 300

Query: 301 -TTIAEDNGRMLGDSSSDDDD 321
             T AEDNGR+L DSSSD+DD
Sbjct: 301 MMTAAEDNGRVLEDSSSDEDD 320

[Close]

BLAST of Spg006289.1 vs. ExPASy TrEMBL
Match: A0A6J1ENV8 (RRP15-like protein OS=Cucurbita moschata OX=3662 GN=LOC111435218 PE=3 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 1.2e-135
Identity = 272/314 (86.62%), Postives = 292/314 (92.99%), Query Frame = 0


Query: 9   ESVRGVKRRKKMGSRNKKRPRMMGGSGNKVKVDRKMKKLFQKRAREYNSDDDDD--KEAE 68
           E +RG KR KK+GSRNKKRPRMMGGSGNKVK+DRKM+KLF+KRAREYNSDD+DD    A 
Sbjct: 6   ELMRGTKRSKKIGSRNKKRPRMMGGSGNKVKIDRKMQKLFRKRAREYNSDDEDDDTNTAA 65

Query: 69  APAVEDDNKVSVQSHEEEVGDEEFSEGEEKEGKDLNADAELSEDDENGEIQPGITKFTEG 128
           APAV D++KVS + + EEV DEEFSEGEE+EG D+N+DA LSEDDE+G +QPGITKF EG
Sbjct: 66  APAVGDESKVS-EHNREEVEDEEFSEGEEEEGNDVNSDAGLSEDDESGVMQPGITKFIEG 125

Query: 129 CRAFRAAFRSILKKSISEETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKLMVAEKG 188
           CRAFRAAFRSILKKSIS+ETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEK ++AEKG
Sbjct: 126 CRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQLLAEKG 185

Query: 189 HVKPATYLDFHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAINKRRKEAFF 248
           HVKPATYLD HEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAI+KRRKEAFF
Sbjct: 186 HVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAISKRRKEAFF 245

Query: 249 SELGKTTLSATNSNAKGNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTTIAED 308
           SELGK TLSATNSNAKGNTSG AA+AEGPAWAPLRDNYMLTNSKLKDWDKMPDNTT AED
Sbjct: 246 SELGKPTLSATNSNAKGNTSGDAAEAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTTKAED 305

Query: 309 NGRMLGDSSSDDDD 321
           NGRMLGDSSSDDDD
Sbjct: 306 NGRMLGDSSSDDDD 318

[Close]

BLAST of Spg006289.1 vs. ExPASy TrEMBL
Match: A0A6J1C2C5 (RRP15-like protein OS=Momordica charantia OX=3673 GN=LOC111007639 PE=3 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 2.0e-135
Identity = 275/322 (85.40%), Postives = 296/322 (91.93%), Query Frame = 0


Query: 1   MAENANAVESVRGVKRRKKMGSRNKKRPRMMGGSGNKVKVDRKMKKLFQKRAREYNSDDD 60
           MA++A AVE+V G KRRKK+GSRNKKRPRM GG GNKVKVDRKMKKLF+KRAREYNSDDD
Sbjct: 1   MADDALAVETVGGAKRRKKIGSRNKKRPRMTGGGGNKVKVDRKMKKLFRKRAREYNSDDD 60

Query: 61  DDKEAE--APAVEDDNKVSVQSHEEEVGDEEFSEGEEKEGKDLNADAELSEDDENGEIQP 120
           DD+E E  APAV D++ VS++S EE+  DEEF E E  EGKD+NADAELSEDDENGEIQP
Sbjct: 61  DDEEEEAAAPAVGDESTVSLRSPEED-RDEEFPEDEGGEGKDVNADAELSEDDENGEIQP 120

Query: 121 GITKFTEGCRAFRAAFRSILKKSISEETLGPILSANKKLVAEKLAEEEAERKVKGEAKKE 180
           GITKFTEGCRAFRAAFRSILKKS+S+ETLGPILSANKKLVAEKLAEEEAERKVKGEAKKE
Sbjct: 121 GITKFTEGCRAFRAAFRSILKKSVSDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKE 180

Query: 181 KLMVAEKGHVKPATYLDFHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAIN 240
           K +VAEKGHVKPA YLDFHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAI 
Sbjct: 181 KQLVAEKGHVKPANYLDFHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAIT 240

Query: 241 KRRKEAFFSELGKTTLSATNSNAKGNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMP 300
           KRRKEAFFSELGKTTLSATN N+K NTS GA DAEGPAWAPLRDNYMLTNSKLKDWDKMP
Sbjct: 241 KRRKEAFFSELGKTTLSATN-NSKVNTSAGAVDAEGPAWAPLRDNYMLTNSKLKDWDKMP 300

Query: 301 DNTTIAEDNGRMLGDSSSDDDD 321
           D TT++ED+GRML +SSSDD+D
Sbjct: 301 DTTTLSEDDGRMLENSSSDDED 320

[Close]

BLAST of Spg006289.1 vs. TAIR 10
Match: AT5G48240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 402 Blast hits to 382 proteins in 162 species: Archae - 0; Bacteria - 4; Metazoa - 139; Fungi - 111; Plants - 54; Viruses - 1; Other Eukaryotes - 93 (source: NCBI BLink). )

HSP 1 Score: 265.0 bits (676), Expect = 7.8e-71
Identity = 164/307 (53.42%), Postives = 216/307 (70.36%), Query Frame = 0


Query: 13  GVKRRKKMGSRNKKRPRMMGGSGNKVKVDRKMKKLFQKRAREYNSDDDDDKEAEAPAVED 72
           GVK+  K  +RNKK+ +    + ++ KV  K +KLFQKRAR+YNSDDD++++ E+     
Sbjct: 22  GVKKGTK-AARNKKQ-KSKPSTSDRFKVTMKNQKLFQKRARDYNSDDDEEEDDES----- 81

Query: 73  DNKVSVQSHEEEVGDEEFSEGEEKEGKDLNADAELSEDDENGEIQPGITKF-TEGCRAFR 132
             +  V   E+   D       E+ G++ N   E S+ +++GEI+ GITKF T+GC AF+
Sbjct: 82  KKQPEVTIREKIFSDANMGPNYEEIGEEDN--DENSDGEDHGEIESGITKFATDGCNAFK 141

Query: 133 AAFRSILKKSISEETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKLMVAEKGHVKPA 192
            AF++I+KK+  ++TLGP+LSA+K L+ EKLAE+EAE+K KG+A+K K ++AEKGHVKP 
Sbjct: 142 IAFKAIMKKTKGDDTLGPVLSAHKHLIGEKLAEDEAEKKAKGQARKAKHLIAEKGHVKPG 201

Query: 193 TYLDFHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAINKRRKEAFFSELGK 252
           +YLD HEK LIGVATKGVVKLFNAVNKAQHAQKGLNPSR+KDAK + KRRKEAF SELGK
Sbjct: 202 SYLDSHEKILIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDAKVLKKRRKEAFLSELGK 261

Query: 253 TTLSATNSNAKGNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDNTTIAEDNGRML 312
           T         K +T    ++ E P WAPLRDNYML N KLKDWDK  + T+  +D   + 
Sbjct: 262 T---------KTDTKAHKSEDEAPVWAPLRDNYMLANPKLKDWDKKQE-TSEGDDFAGLS 309

Query: 313 GDSSSDD 319
           GD S +D
Sbjct: 322 GDESYED 309

[Close]

BLAST of Spg006289.1 vs. TAIR 10
Match: AT5G48240.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 286 Blast hits to 283 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 97; Plants - 41; Viruses - 1; Other Eukaryotes - 42 (source: NCBI BLink). )

HSP 1 Score: 254.2 bits (648), Expect = 1.4e-67
Identity = 166/345 (48.12%), Postives = 219/345 (63.48%), Query Frame = 0


Query: 13  GVKRRKKMGSRNKKRPRMMGGSGNKVKVDRKMKKLFQKRAREYNSDDDDDKEAEAPAVED 72
           GVK+  K  +RNKK+ +    + ++ KV  K +KLFQKRAR+YNSDDD++++ E+     
Sbjct: 22  GVKKGTK-AARNKKQ-KSKPSTSDRFKVTMKNQKLFQKRARDYNSDDDEEEDDES----- 81

Query: 73  DNKVSVQSHEEEVGDEEFSEGEEKEGKDLNADAELSEDDENGEIQPGITKF-TEGCRAFR 132
             +  V   E+   D       E+ G++ N   E S+ +++GEI+ GITKF T+GC AF+
Sbjct: 82  KKQPEVTIREKIFSDANMGPNYEEIGEEDN--DENSDGEDHGEIESGITKFATDGCNAFK 141

Query: 133 AAFRSILKKSISEETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKLMVAEKGHVKPA 192
            AF++I+KK+  ++TLGP+LSA+K L+ EKLAE+EAE+K KG+A+K K ++AEKGHVKP 
Sbjct: 142 IAFKAIMKKTKGDDTLGPVLSAHKHLIGEKLAEDEAEKKAKGQARKAKHLIAEKGHVKPG 201

Query: 193 TYLDFHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAINKRRKEAFFSELGK 252
           +YLD HEK LIGVATKGVVKLFNAVNKAQHAQKGLNPSR+KDAK + KRRKEAF SELGK
Sbjct: 202 SYLDSHEKILIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDAKVLKKRRKEAFLSELGK 261

Query: 253 TTLSATNSNA--------------------------------------KGNTSGGAADAE 312
           T       +A                                      KG+ S   ++ E
Sbjct: 262 TKTDTKPFDARRNKLVFCLDLAPIESHEKNHLMSESKLVFCLELASIEKGSPSAHKSEDE 321

Query: 313 GPAWAPLRDNYMLTNSKLKDWDKMPDNTTIAEDNGRMLGDSSSDD 319
            P WAPLRDNYML N KLKDWDK  + T+  +D   + GD S +D
Sbjct: 322 APVWAPLRDNYMLANPKLKDWDKKQE-TSEGDDFAGLSGDESYED 356

[Close]

BLAST of Spg006289.1 vs. TAIR 10
Match: AT5G48240.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 223.4 bits (568), Expect = 2.6e-58
Identity = 136/241 (56.43%), Postives = 180/241 (74.69%), Query Frame = 0


Query: 13  GVKRRKKMGSRNKKRPRMMGGSGNKVKVDRKMKKLFQKRAREYNSDDDDDKEAEAPAVED 72
           GVK+  K  +RNKK+ +    + ++ KV  K +KLFQKRAR+YNSDDD++++ E+     
Sbjct: 22  GVKKGTK-AARNKKQ-KSKPSTSDRFKVTMKNQKLFQKRARDYNSDDDEEEDDES----- 81

Query: 73  DNKVSVQSHEEEVGDEEFSEGEEKEGKDLNADAELSEDDENGEIQPGITKF-TEGCRAFR 132
             +  V   E+   D       E+ G++ N   E S+ +++GEI+ GITKF T+GC AF+
Sbjct: 82  KKQPEVTIREKIFSDANMGPNYEEIGEEDN--DENSDGEDHGEIESGITKFATDGCNAFK 141

Query: 133 AAFRSILKKSISEETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKLMVAEKGHVKPA 192
            AF++I+KK+  ++TLGP+LSA+K L+ EKLAE+EAE+K KG+A+K K ++AEKGHVKP 
Sbjct: 142 IAFKAIMKKTKGDDTLGPVLSAHKHLIGEKLAEDEAEKKAKGQARKAKHLIAEKGHVKPG 201

Query: 193 TYLDFHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRAKDAKAINKRRKEAFFSELGK 252
           +YLD HEK LIGVATKGVVKLFNAVNKAQHAQKGLNPSR+KDAK + KRRKEAF SELGK
Sbjct: 202 SYLDSHEKILIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDAKVLKKRRKEAFLSELGK 253

The following BLAST results are available for this feature:

BLAST of Spg006289.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888922.1	1.3e-139	88.16	RRP15-like protein [Benincasa hispida] >XP_038888940.1 RRP15-like protein [Benin...	[more]
XP_004144556.1	3.1e-138	86.29	RRP15-like protein [Cucumis sativus] >XP_011658649.1 RRP15-like protein [Cucumis...	[more]
XP_008462030.1	1.5e-137	85.98	PREDICTED: RRP15-like protein [Cucumis melo]	[more]
TYK03372.1	2.9e-136	85.36	RRP15-like protein [Cucumis melo var. makuwa]	[more]
XP_022928388.1	2.5e-135	86.62	RRP15-like protein [Cucurbita moschata]	[more]

BLAST of Spg006289.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3T062	5.7e-10	33.33	RRP15-like protein OS=Bos taurus OX=9913 GN=RRP15 PE=2 SV=1	[more]
Q5M947	1.1e-05	29.09	RRP15-like protein OS=Rattus norvegicus OX=10116 GN=Rrp15 PE=1 SV=1	[more]
Q9CYX7	2.5e-05	29.54	RRP15-like protein OS=Mus musculus OX=10090 GN=Rrp15 PE=1 SV=2	[more]
Q9Y3B9	4.3e-05	32.17	RRP15-like protein OS=Homo sapiens OX=9606 GN=RRP15 PE=1 SV=2	[more]

BLAST of Spg006289.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K320	1.5e-138	86.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031550 PE=3 SV=1	[more]
A0A1S3CFX9	7.5e-138	85.98	RRP15-like protein OS=Cucumis melo OX=3656 GN=LOC103500496 PE=3 SV=1	[more]
A0A5D3BX18	1.4e-136	85.36	RRP15-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84663...	[more]
A0A6J1ENV8	1.2e-135	86.62	RRP15-like protein OS=Cucurbita moschata OX=3662 GN=LOC111435218 PE=3 SV=1	[more]
A0A6J1C2C5	2.0e-135	85.40	RRP15-like protein OS=Momordica charantia OX=3673 GN=LOC111007639 PE=3 SV=1	[more]

BLAST of Spg006289.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48240.1	7.8e-71	53.42	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G48240.3	1.4e-67	48.12	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G48240.2	2.6e-58	56.43	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012459	Ribosomal RNA-processing protein 15	PFAM	PF07890	Rrp15p	coord: 130..249 e-value: 2.1E-19 score: 70.2
IPR012459	Ribosomal RNA-processing protein 15	PANTHER	PTHR13245	RRP15-LIKE PROTEIN	coord: 17..317
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 288..302
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..320

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg006289	Spg006289	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg006289.1-five_prime_utr	Spg006289.1-five_prime_utr-scaffold4:4948996..4949350	five_prime_UTR
Spg006289.1-five_prime_utr	Spg006289.1-five_prime_utr-scaffold4:4950059..4950069	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg006289.1-cds	Spg006289.1-cds-scaffold4:4950070..4950510	CDS
Spg006289.1-cds	Spg006289.1-cds-scaffold4:4950581..4950682	CDS
Spg006289.1-cds	Spg006289.1-cds-scaffold4:4950776..4950857	CDS
Spg006289.1-cds	Spg006289.1-cds-scaffold4:4950988..4951007	CDS
Spg006289.1-cds	Spg006289.1-cds-scaffold4:4951128..4951188	CDS
Spg006289.1-cds	Spg006289.1-cds-scaffold4:4952092..4952171	CDS
Spg006289.1-cds	Spg006289.1-cds-scaffold4:4952437..4952544	CDS
Spg006289.1-cds	Spg006289.1-cds-scaffold4:4952635..4952703	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg006289.1-three_prime_utr	Spg006289.1-three_prime_utr-scaffold4:4952704..4953133	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg006289.1	Spg006289.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
biological_process	GO:0000460	maturation of 5.8S rRNA
biological_process	GO:0000470	maturation of LSU-rRNA
cellular_component	GO:0030687	preribosome, large subunit precursor