Spg006219.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg006219.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	scaffold4: 4641525 .. 4643506 (-)
Sequence length	798
RNA-Seq Expression	Spg006219.1
Synteny	Spg006219.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGTCTACTTGCTATTGATGCAAACAACCCTATCTAAAACCAAGTCTTATGGTCAGATGGCCCATTTCAATAAGAGTTTTGGGCTTTTCTTCTCTCATTTGTTCATTCGGCCCATTAGAACTTAGGAGCTGATTTGGTCAATAGATACTTGTATTGTGGCTATGTGGACGACCCCACCAATATCTTGGTTGCCACGTGGCATAACAATACGCCATAAATGATCTGCACGAGAATCTGGTTTAAGCAGAAGGACCAATAGGATGCTGCTGACCTGTAGCAATCCTAATCCACTATATCTTTCCATCCCCAATATAACCTCCATTTTCACTACCATCTTCCTCGTCTAAAACCAGCCTTCAGCTCCCTTTGCCATTGCATCAAACTTCTAACAAGCTTCAAAGAAAAATGGCCACCTCTGCTATCCAACAGTCCGCCTTTGCCGGCCAGGCTGCCTTGAAGCAGTCCAATGAGCTCGTCCGAAGGGTAGGCGCTGTCGGTGGCGGCCGCTTCACCATGCGGCGGACAGTCAAGAGTGCTCCACAGAGCATATGGTAAAGCCCCTTCTCTAAGCTCCACATATTCACTTTTAGCAGTTGTGTTTCTGTATCAGGATCAAAGGAAGTTAAAACTGTTAAAAAATTAATGCCTTGCTGTTTTTTCTGCAACTTCATGTTCTAGTAGTCTCTTGGGCCATTTTTACCTTGTGTAGTAATGTATGGTGTTCTCCTGCAATGGACATGATGAGTTAAATAAAGATTAGTTCATTCAGTTCAGTTCATTATAAGATGTTTAAACATTTACTGAATTGAATTGTGAGCAAAGTTAATTAGGAAGATTTTTCATACATTAGTGTTTCTAAGAACACAGATTTTAAGGGGGGGAAGAACAAAGAAGAAGAAATTTGAGTTCCATTTGAAATTCAAATGCTTGTTTTTCTTGACAAAACAGGTATGGGCCAGACCGCCCAAAATACTTGGGACCATTCTCTGAACAAACACCATCTTACCTGACTGGAGAGTTCCCTGGTGACTATGGATGGGACACAGCCGGTCTGTCGGCAGATCCCGAGACCTTCGCGAAGAACCGGGAGCTTGAGGTGATCCACTCCCGATGGGCCATGCTTGGTGCATTAGGTTGTGTCTTCCCTGAAATCCTTGCAAAGAATGGTGTCAAGTTTGGTGAATCAGTTTGGTTCAAGGCTGGTTCTCAGATCTTCTCTGAGGGTGGTCTAGATTACCTTGGCAACCCAAACCTCATCCATGCTCAGAGTATCCTTGCAATCTGGGCTTGCCAGGTTGTGCTCATGGGCTTTGTCGAAGGTTACAGAGTTGGTGGCGGTCCCCTTGGTGAAGGACTGGACCCAATTTACCCAGGAGGCGCCTTTGACCCACTGGGATTGGCTGATGACCCAGATGCATTTGCTGAGTTGAAGGTGAAGGAACTAAAGAATGGAAGGCTGGCAATGTTCTCCATGTTCGGATTCTTCGTCCAGGCTATCGTCACCGGAAAGGGTCCTATTGAGAATCTCTTTGACCATGTTGCAGATCCTGTTGCCAACAATGCATGGGCTTACGCCACCAACTTCGTACCCGGAAAATGAAGAAACCTGTAGGAAACAACTATCTGTTTTACCATACTCAATCATCTCACTTTTCCTGAAAATTTCATGTTGTGGACTCCATGAGTGCCGATGTAATTTCTTTAGTAGAAACTTCCTGCAATTAAATTTGAATCATTGAAGTTCAAAGTTCTTTGTGCTTTTTGTTGTTTTCACATATAGACTTTCAGCATGCATCGCGGGAGGATGGTACATACTACTTGCAGGTTTGAGAAAAATACAGATTGATTGATCCCTGGGAAAGATAAGAGGTTGAAGTAGAATTTCAAAACCACAAGGCTTCTCCTTAGTTTTGTTTGAGACATAAAGAAGATAAAACTATGAAGCTTTTATACAAAACTGATAATCACATATAACTTTCCA

mRNA sequence

ATGGCCACCTCTGCTATCCAACAGTCCGCCTTTGCCGGCCAGGCTGCCTTGAAGCAGTCCAATGAGCTCGTCCGAAGGGTAGGCGCTGTCGGTGGCGGCCGCTTCACCATGCGGCGGACAGTCAAGAGTGCTCCACAGAGCATATGGTATGGGCCAGACCGCCCAAAATACTTGGGACCATTCTCTGAACAAACACCATCTTACCTGACTGGAGAGTTCCCTGGTGACTATGGATGGGACACAGCCGGTCTGTCGGCAGATCCCGAGACCTTCGCGAAGAACCGGGAGCTTGAGGTGATCCACTCCCGATGGGCCATGCTTGGTGCATTAGGTTGTGTCTTCCCTGAAATCCTTGCAAAGAATGGTGTCAAGTTTGGTGAATCAGTTTGGTTCAAGGCTGGTTCTCAGATCTTCTCTGAGGGTGGTCTAGATTACCTTGGCAACCCAAACCTCATCCATGCTCAGAGTATCCTTGCAATCTGGGCTTGCCAGGTTGTGCTCATGGGCTTTGTCGAAGGTTACAGAGTTGGTGGCGGTCCCCTTGGTGAAGGACTGGACCCAATTTACCCAGGAGGCGCCTTTGACCCACTGGGATTGGCTGATGACCCAGATGCATTTGCTGAGTTGAAGGTGAAGGAACTAAAGAATGGAAGGCTGGCAATGTTCTCCATGTTCGGATTCTTCGTCCAGGCTATCGTCACCGGAAAGGGTCCTATTGAGAATCTCTTTGACCATGTTGCAGATCCTGTTGCCAACAATGCATGGGCTTACGCCACCAACTTCGTACCCGGAAAATGA

Coding sequence (CDS)

ATGGCCACCTCTGCTATCCAACAGTCCGCCTTTGCCGGCCAGGCTGCCTTGAAGCAGTCCAATGAGCTCGTCCGAAGGGTAGGCGCTGTCGGTGGCGGCCGCTTCACCATGCGGCGGACAGTCAAGAGTGCTCCACAGAGCATATGGTATGGGCCAGACCGCCCAAAATACTTGGGACCATTCTCTGAACAAACACCATCTTACCTGACTGGAGAGTTCCCTGGTGACTATGGATGGGACACAGCCGGTCTGTCGGCAGATCCCGAGACCTTCGCGAAGAACCGGGAGCTTGAGGTGATCCACTCCCGATGGGCCATGCTTGGTGCATTAGGTTGTGTCTTCCCTGAAATCCTTGCAAAGAATGGTGTCAAGTTTGGTGAATCAGTTTGGTTCAAGGCTGGTTCTCAGATCTTCTCTGAGGGTGGTCTAGATTACCTTGGCAACCCAAACCTCATCCATGCTCAGAGTATCCTTGCAATCTGGGCTTGCCAGGTTGTGCTCATGGGCTTTGTCGAAGGTTACAGAGTTGGTGGCGGTCCCCTTGGTGAAGGACTGGACCCAATTTACCCAGGAGGCGCCTTTGACCCACTGGGATTGGCTGATGACCCAGATGCATTTGCTGAGTTGAAGGTGAAGGAACTAAAGAATGGAAGGCTGGCAATGTTCTCCATGTTCGGATTCTTCGTCCAGGCTATCGTCACCGGAAAGGGTCCTATTGAGAATCTCTTTGACCATGTTGCAGATCCTGTTGCCAACAATGCATGGGCTTACGCCACCAACTTCGTACCCGGAAAATGA

Protein sequence

MATSAIQQSAFAGQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAKNGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK

Homology

[Close]

BLAST of Spg006219.1 vs. NCBI nr
Match: XP_038887832.1 (chlorophyll a-b binding protein 151, chloroplastic [Benincasa hispida])

HSP 1 Score: 545.8 bits (1405), Expect = 2.0e-151
Identity = 263/265 (99.25%), Postives = 264/265 (99.62%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAF GQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFTGQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGV+FGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Spg006219.1 vs. NCBI nr
Match: XP_008462084.1 (PREDICTED: chlorophyll a-b binding protein 151, chloroplastic [Cucumis melo] >KAA0059192.1 chlorophyll a-b binding protein 151 [Cucumis melo var. makuwa] >TYK19327.1 chlorophyll a-b binding protein 151 [Cucumis melo var. makuwa])

HSP 1 Score: 544.7 bits (1402), Expect = 4.5e-151
Identity = 262/265 (98.87%), Postives = 264/265 (99.62%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQAALKQSNELVR+VGAVGG RFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQAALKQSNELVRKVGAVGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Spg006219.1 vs. NCBI nr
Match: XP_004144543.1 (chlorophyll a-b binding protein 151, chloroplastic [Cucumis sativus] >KGN43422.1 hypothetical protein Csa_020546 [Cucumis sativus])

HSP 1 Score: 542.0 bits (1395), Expect = 2.9e-150
Identity = 260/265 (98.11%), Postives = 263/265 (99.25%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQ ALKQSNELVR+VGA+GG RFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVRKVGALGGARFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Spg006219.1 vs. NCBI nr
Match: XP_022135994.1 (chlorophyll a-b binding protein 151, chloroplastic [Momordica charantia])

HSP 1 Score: 541.6 bits (1394), Expect = 3.8e-150
Identity = 260/265 (98.11%), Postives = 263/265 (99.25%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQ ALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGV+FGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGG+FDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NL DH+ADPVANNAWAYATNFVPGK
Sbjct: 241 NLLDHIADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Spg006219.1 vs. NCBI nr
Match: XP_022928240.1 (chlorophyll a-b binding protein 151, chloroplastic [Cucurbita moschata] >XP_023529768.1 chlorophyll a-b binding protein 151, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6589102.1 Chlorophyll a-b binding protein 151, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 541.2 bits (1393), Expect = 5.0e-150
Identity = 259/265 (97.74%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQ ALKQSNELVR+VGA GG RFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGESVWFKAGSQIFSEGGLDYLGNPNL+HAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Spg006219.1 vs. ExPASy Swiss-Prot
Match: P27518 (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum OX=3635 GN=CAB-151 PE=2 SV=2)

HSP 1 Score: 526.6 bits (1355), Expect = 1.7e-148
Identity = 251/265 (94.72%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQ ALKQSNELV ++GAVGGGR +MRRTVKSAP SIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FS+Q PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEIL+K
Sbjct: 61  FSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGE+VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDH+ADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHLADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Spg006219.1 vs. ExPASy Swiss-Prot
Match: P12062 (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. OX=4104 GN=CAB37 PE=3 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 1.1e-144
Identity = 245/265 (92.45%), Postives = 255/265 (96.23%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQ ALK  NELVR++G+ GGGR TMRRTVKSAPQSIWYG DRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEIL+K
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGV FGE+VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGFVEGYRVGGGP
Sbjct: 121 NGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLD IYPGGAFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NL+DHVADPVANNAWA+ATNFVPGK
Sbjct: 241 NLYDHVADPVANNAWAFATNFVPGK 265

[Close]

BLAST of Spg006219.1 vs. ExPASy Swiss-Prot
Match: P27494 (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB36 PE=3 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 4.3e-144
Identity = 243/265 (91.70%), Postives = 254/265 (95.85%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAI+QSAFAGQ ALK  NELVR++G+  GGR TMRRTVKSAPQSIWYG DRPKYLGP
Sbjct: 1   MATSAIEQSAFAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEIL+K
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGE+VWFKAGSQIFSEGGLDYLGNPNLIHAQSILA+WA QVVLMG +EGYRVGGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLD IYPGGAFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Spg006219.1 vs. ExPASy Swiss-Prot
Match: Q9SHR7 (Chlorophyll a-b binding protein 2.1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB2.1 PE=1 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 1.2e-143
Identity = 240/264 (90.91%), Postives = 254/264 (96.21%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQS+FAGQ ALK SNEL+R+VG  GGGR TMRRTVKS PQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSSFAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSE TPSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC FPEIL+K
Sbjct: 61  FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGE+VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGF+EGYR+GGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDP+YPGGAFDPL LA+DP+AF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPG 265
           NLFDH+ADPVANNAW+YATNFVPG
Sbjct: 241 NLFDHLADPVANNAWSYATNFVPG 264

[Close]

BLAST of Spg006219.1 vs. ExPASy Swiss-Prot
Match: Q9S7J7 (Chlorophyll a-b binding protein 2.2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB2.2 PE=1 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 2.1e-143
Identity = 238/265 (89.81%), Postives = 256/265 (96.60%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQS+FAGQ ALK S++L+++VG +GGGR TMRRTVKS PQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSSFAGQTALKPSSDLIQKVGVLGGGRVTMRRTVKSTPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSE TPSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC FPEIL+K
Sbjct: 61  FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGE+VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGF+EGYR+GGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDP+YPGGAFDPL LA+DP+AF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDH+ADPVANNAW+YATNFVPGK
Sbjct: 241 NLFDHLADPVANNAWSYATNFVPGK 265

[Close]

BLAST of Spg006219.1 vs. ExPASy TrEMBL
Match: A0A5D3D6Y9 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold295G00480 PE=3 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 2.2e-151
Identity = 262/265 (98.87%), Postives = 264/265 (99.62%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQAALKQSNELVR+VGAVGG RFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQAALKQSNELVRKVGAVGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Spg006219.1 vs. ExPASy TrEMBL
Match: A0A1S3CG37 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500523 PE=3 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 2.2e-151
Identity = 262/265 (98.87%), Postives = 264/265 (99.62%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQAALKQSNELVR+VGAVGG RFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQAALKQSNELVRKVGAVGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Spg006219.1 vs. ExPASy TrEMBL
Match: A0A0A0K565 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_7G033300 PE=3 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 1.4e-150
Identity = 260/265 (98.11%), Postives = 263/265 (99.25%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQ ALKQSNELVR+VGA+GG RFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVRKVGALGGARFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Spg006219.1 vs. ExPASy TrEMBL
Match: A0A6J1C312 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007803 PE=3 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 1.9e-150
Identity = 260/265 (98.11%), Postives = 263/265 (99.25%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQ ALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQPALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGV+FGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVQFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGG+FDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NL DH+ADPVANNAWAYATNFVPGK
Sbjct: 241 NLLDHIADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Spg006219.1 vs. ExPASy TrEMBL
Match: A0A6J1ER60 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111435134 PE=3 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 2.4e-150
Identity = 259/265 (97.74%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQ ALKQSNELVR+VGA GG RFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGESVWFKAGSQIFSEGGLDYLGNPNL+HAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Spg006219.1 vs. TAIR 10
Match: AT2G05100.1 (photosystem II light harvesting complex gene 2.1 )

HSP 1 Score: 510.4 bits (1313), Expect = 8.8e-145
Identity = 240/264 (90.91%), Postives = 254/264 (96.21%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQS+FAGQ ALK SNEL+R+VG  GGGR TMRRTVKS PQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSSFAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSE TPSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC FPEIL+K
Sbjct: 61  FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGE+VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGF+EGYR+GGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDP+YPGGAFDPL LA+DP+AF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPG 265
           NLFDH+ADPVANNAW+YATNFVPG
Sbjct: 241 NLFDHLADPVANNAWSYATNFVPG 264

[Close]

BLAST of Spg006219.1 vs. TAIR 10
Match: AT2G05070.1 (photosystem II light harvesting complex gene 2.2 )

HSP 1 Score: 509.6 bits (1311), Expect = 1.5e-144
Identity = 238/265 (89.81%), Postives = 256/265 (96.60%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQAALKQSNELVRRVGAVGGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQS+FAGQ ALK S++L+++VG +GGGR TMRRTVKS PQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSSFAGQTALKPSSDLIQKVGVLGGGRVTMRRTVKSTPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120
           FSE TPSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC FPEIL+K
Sbjct: 61  FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGE+VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGF+EGYR+GGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDP+YPGGAFDPL LA+DP+AF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDH+ADPVANNAW+YATNFVPGK
Sbjct: 241 NLFDHLADPVANNAWSYATNFVPGK 265

[Close]

BLAST of Spg006219.1 vs. TAIR 10
Match: AT3G27690.1 (photosystem II light harvesting complex gene 2.3 )

HSP 1 Score: 508.1 bits (1307), Expect = 4.4e-144
Identity = 239/266 (89.85%), Postives = 254/266 (95.49%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQAALKQSNELVRRVGAV-GGGRFTMRRTVKSAPQSIWYGPDRPKYLG 60
           MATSAIQ S+FAGQ  LK SN+L+R++GA  GGGR  MRRTVKS PQSIWYGPDRPKYLG
Sbjct: 1   MATSAIQHSSFAGQTTLKPSNDLLRKIGASNGGGRIIMRRTVKSTPQSIWYGPDRPKYLG 60

Query: 61  PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILA 120
           PFSE TPSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC FPEIL+
Sbjct: 61  PFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILS 120

Query: 121 KNGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGG 180
           KNGVKFGE+VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGF+EGYR+GGG
Sbjct: 121 KNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRIGGG 180

Query: 181 PLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 240
           PLGEGLDP+YPGGAFDPL LA+DP+AF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI
Sbjct: 181 PLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 240

Query: 241 ENLFDHVADPVANNAWAYATNFVPGK 266
           ENLFDH+ADPVANNAWAYATNFVPGK
Sbjct: 241 ENLFDHIADPVANNAWAYATNFVPGK 266

[Close]

BLAST of Spg006219.1 vs. TAIR 10
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2 )

HSP 1 Score: 422.2 bits (1084), Expect = 3.2e-118
Identity = 206/268 (76.87%), Postives = 230/268 (85.82%), Query Frame = 0


Query: 2   ATSAIQQSAFAGQAALKQSNELVRRVGAVGGGRFTMRRTV---KSAPQSIWYGPDRPKYL 61
           +T A+   AFAG+A    ++++      +G GR TMR+TV   K    S WYG DR KYL
Sbjct: 4   STMALSSPAFAGKAVKPAASDV------LGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYL 63

Query: 62  GPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEIL 121
           GPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPE+L
Sbjct: 64  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 123

Query: 122 AKNGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGG 181
           A+NGVKFGE+VWFKAGSQIFS+GGLDYLGNP+L+HAQSILAIWA QV+LMG VEGYRV G
Sbjct: 124 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 183

Query: 182 -GPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 241
            GPLGE  D +YPGG+FDPLGLA DP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 184 DGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 243

Query: 242 PIENLFDHVADPVANNAWAYATNFVPGK 266
           P+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 244 PLENLADHLADPVNNNAWAFATNFVPGK 265

[Close]

BLAST of Spg006219.1 vs. TAIR 10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3 )

HSP 1 Score: 420.6 bits (1080), Expect = 9.2e-118
Identity = 208/268 (77.61%), Postives = 228/268 (85.07%), Query Frame = 0


Query: 2   ATSAIQQSAFAGQAALKQSNELVRRVGAVGGGRFTMRRTV---KSAPQSIWYGPDRPKYL 61
           +T A+   AFAG+A     N        +G GR TMR+TV   K    S WYG DR KYL
Sbjct: 4   STMALSSPAFAGKAV----NLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYL 63

Query: 62  GPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEIL 121
           GPFS ++PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPE+L
Sbjct: 64  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 123

Query: 122 AKNGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRV-G 181
           A+NGVKFGE+VWFKAGSQIFS+GGLDYLGNP+L+HAQSILAIWA QV+LMG VEGYRV G
Sbjct: 124 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 183

Query: 182 GGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 241
            GPLGE  D +YPGG+FDPLGLA DP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 184 NGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 243

Query: 242 PIENLFDHVADPVANNAWAYATNFVPGK 266
           PIENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 244 PIENLADHLADPVNNNAWAFATNFVPGK 267

The following BLAST results are available for this feature:

BLAST of Spg006219.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887832.1	2.0e-151	99.25	chlorophyll a-b binding protein 151, chloroplastic [Benincasa hispida]	[more]
XP_008462084.1	4.5e-151	98.87	PREDICTED: chlorophyll a-b binding protein 151, chloroplastic [Cucumis melo] >KA...	[more]
XP_004144543.1	2.9e-150	98.11	chlorophyll a-b binding protein 151, chloroplastic [Cucumis sativus] >KGN43422.1...	[more]
XP_022135994.1	3.8e-150	98.11	chlorophyll a-b binding protein 151, chloroplastic [Momordica charantia]	[more]
XP_022928240.1	5.0e-150	97.74	chlorophyll a-b binding protein 151, chloroplastic [Cucurbita moschata] >XP_0235...	[more]

BLAST of Spg006219.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27518	1.7e-148	94.72	Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum OX=3635...	[more]
P12062	1.1e-144	92.45	Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. OX=4104 GN=CAB3...	[more]
P27494	4.3e-144	91.70	Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
Q9SHR7	1.2e-143	90.91	Chlorophyll a-b binding protein 2.1, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
Q9S7J7	2.1e-143	89.81	Chlorophyll a-b binding protein 2.2, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]

BLAST of Spg006219.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D6Y9	2.2e-151	98.87	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3CG37	2.2e-151	98.87	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0K565	1.4e-150	98.11	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A6J1C312	1.9e-150	98.11	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1ER60	2.4e-150	97.74	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of Spg006219.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G05100.1	8.8e-145	90.91	photosystem II light harvesting complex gene 2.1	[more]
AT2G05070.1	1.5e-144	89.81	photosystem II light harvesting complex gene 2.2	[more]
AT3G27690.1	4.4e-144	89.85	photosystem II light harvesting complex gene 2.3	[more]
AT2G34420.1	3.2e-118	76.87	photosystem II light harvesting complex gene B1B2	[more]
AT1G29910.1	9.2e-118	77.61	chlorophyll A/B binding protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 56..258 e-value: 5.1E-90 score: 302.8
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 66..231 e-value: 7.3E-50 score: 169.6
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..265
None	No IPR available	PANTHER	PTHR21649:SF33	CHLOROPHYLL A-B BINDING PROTEIN 2.1, CHLOROPLASTIC-RELATED	coord: 1..265
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 48..262

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg006219	Spg006219	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg006219.1-three_prime_utr	Spg006219.1-three_prime_utr-scaffold4:4641525..4641905	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg006219.1-cds	Spg006219.1-cds-scaffold4:4641906..4642557	CDS
Spg006219.1-cds	Spg006219.1-cds-scaffold4:4642955..4643100	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg006219.1-five_prime_utr	Spg006219.1-five_prime_utr-scaffold4:4643101..4643506	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg006219.1	Spg006219.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0016020	membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding