Spg006213.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg006213.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	sodium/potassium/calcium exchanger 1-like
Location	scaffold4: 4790201 .. 4793486 (+)
Sequence length	840
RNA-Seq Expression	Spg006213.1
Synteny	Spg006213.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTTTTACTCTTCTCTTCTCCCTTTCCTCCATTCTTTAAACCTTTATATCTCTGCAACAATCCACAAGAACTACATCTTCTTGCTCTGCAATGGCCTCCTCGTCTTCATCGTAAGAAATTCCGGTCTCATCGGCAACTCCGGCGACGAACAGAGCGGCGGAAATGGCAGGGGAGCTGAAGCTCTAGGGGCTGCAATGGCGGATGCCAGCAGAAAAATTGAGAGCAAAGTTGAAGATGTAGAAGAAAGGGAAAATGGGTTGATTGCAAAAGAAGAAGAAAGTGAAAGATTGATCACAGAAGATGAAGATGAAGAAGAAGAGGAAGAAAGATTAAATTTTTATGATGAAGAAGAAGAAGAGGAAATTGGGGAATTGAGCAATGAGGAATTGAATAAGAAATGTGAAGAATTCATTAGAAAAATGAAGGCTGGAATTAAATTTGAATCACAGCAAGTGCTTGTTTTGTAAATTGTAACTGAGAATTTAATGGAGAAAAATTCTGACTTTGTAATTTTTTTTACCTTCCAAATTCTGTGGATAGATGTGATTTTTCATATTGGTATAATTAGCATGGATTATTATTGCACTAATATTAAAAAACAAAAAAGAAAAATTGAAAAAAGCTACATTTTATCATAATTTTGTCTTTGAATTTTGAAGATTAAGTTGCATTCTAATGGTTTTGTAAAAGGGTTGTTTCTGAATTTTTGAAGGTTTAAGTGAGAATTTGAAGATGTTTATTGGAATGTAAATTGCTACATGAAAATGAAGATGTTTAATTCATTCCATGTTCAAGTTCAAAATAATAAGTGAATTTCAAGTTAGACTTGTTAAAGTATTTTCTAAATACTTTTTAGGTGTTTTTGAAAAGTTTTAAAAGGCTAAATTATACCAAACCTTCTTTGTGAGTGGTCTCAATTTTGACCATAATGTTTTATAATTTTCAATTTTACCTTTAACTATCTAATTTGCTACAAATAAAACTTCCTTTTTGAGTTTAACATCATTTGAGAGTGACTATTTGAACCTTTGACCTCTTGTTCTAACATTTGTGTCTTGATCAGTTGAATTATGTTCAGATTGATGAAAAGAAAGCTTTTCACTGACAATTTCTACAATGATTGAAAATTTGAAAATGTTAGCCGTGAAATTGAAGCCAATTACCTGAAAATTGAAACCAAATAAATTATAAAAAGTACCTGACATATGTAATTGATTTCGATCTTGCCCTCAATGTTTAACCAGTTTTAATTTAAGTTTCGATATCCTAATTTCTATTACATACTTCAACAAGAATCACTGACGGTAAATAAATTAAAATTTTTGCCAACATGAGTGTTGATGCCAAAATCCGGACAGAAGACTCACCCATCCTTCACGTGCCACCAACGGTAAATTTGTATGAGAGGGGGAAGACGTGAGACAAGAAAACGCTGCACACCGGTGTGGTGCTTGCCACACCGACTCCGATACTTAAGTCAGAAAACTGATGGAAGAGCAAGAGGAAAAGCAGAGAGTTCAGAGAATGAATTTCGGATCCCTTCTTTAGTGACGAAGAGGGGTTTCAATACCTGCTCATGCTCCTAGGGTTTTTCAGGAATTCGGAGGCGTTTTGGGACAAACCAGGCGGAACCGGGGCGGCCAGAGGCAGTAGGGACCAAACGAAGGCGACCAAGCTCGGCCCGCACAAGCGGGTCGAATGGTCGGGCCAAGTTGGCCCGACCCTTTGGTCTGGTCTTCCTCCGGGTCGGTTTCTTGATCTTATCTCTTCCCGGTTGTCCTCGTCAGCTCATTGTGCTTTAGGGTGGTCCAAAATTACCTATAACAATGAGCATAACAGAACTGTCAAGTTTGTACTAATGACCCAGAGGTCTGTGGTTCAAATTATTCCGACCCAGATGTTAAAAAAAAAAAAAAAAAAAAATTAAGAGGCAAAGTTAAAAACAAACCACCTAATTCAAAAGACATTTTGTCTAAAAATATTTCTCACTATTAAAAATTTAAAAAAAAGAAAAGAAAAAAGAAAAACCAACCCCACTTTAGATTTTATTAATTCCATTTTATTTTAAAAAAATAAAAGAGAATTTGTTTGGTTCTAATCCTTAACTTCCTCAACAAGGAGTGGAGAAAACATCCACCCAAAAAAAAAAAAAAAAGTATCTTTTTAGAGATAAGTTTGATAAAAAAAAGTTAGCCCTAATGAGTCAATGTCCTCATCCAATGTTGCTGAAGAAAAAAAATTTAAAATTTTGGGAATAAATGGCTCCAACTCTTCCAGTCTGTTATAATTGTCTTACAAGTTAGAGATGTCAACAGCATCTTTTTGGTTTGGTCTTTGGTCCCTGTCTTTCTACTTATTTTGTTTTTGTATCCTTGTTTATGTGTCCTTTGTTTGTCTTAATTTGTCTGTCCCACTTTGCAAGAAGCTTCCTTTCAAAGGCTCACTTGACTCCAAATTTTGGGTCTTTTTTTTTTTTTCCAAGTATGAAGTATTCTTTGTGCCAAAAAAAATTTGACCCTATTGGTTAAATGACATAAAAGTCACATTATGTCGAGTGAAGTTACCATGTCTGCGTCGTATCAAACGGTCATAGTAGATGAACACATCAATGACTATTCAACTTATTGTTCTACTATTTATTGATGTTAAGTTGCATCTAGTGCTCAAATTTTCCTTCTTCCCTTTATAACTTTTTCTAACTAATGGAAAAGTTCAAATGAATCTTTTTAAAGAGTTTGTTTTGTTTATGTTCCAAAACTATTTTTAAGAGTTGTCGAATTGCTGGTAAAAATTAGTGTTACGAACATCCTTTCCATAAATTCGCGATTTTAAAAGAAGAAACCATGTCATCCTTGGGGGACAAATCTGATGGTTAGGATTTGAAATGTTGGAAACACTTTTAAGACCAAGTGAAGCTCTAAAATCGTTTAAAATCTTTGTTGTCTCCCAAAACCGACCGCCCATCTAAAGATCAGTGGAAGCAAGCCATGAGTATAATATAAAGAGTGATCATCGATACCCTAGTAATCAAAAAAGAAAAAAGCCAAGTCATTTTTCAAAATGCACACTCCCAAAGAACAGTTATCCGAACATGTTCAAAACTCCATCAAATTAAAAAGTGATTGTGTTCTATGAATCTTGAATTGAGCTTTGGAAAGAGGAGATTTTGATAATTTTATCAGTTGGATTGAGAGCAAAAATGAGAAGACAAAGTCTTGCTTTTCACCCATGGATGAAAGGGTAAGTTTGAAAGAAGCTTTTGGAGTAATGGCAGGCAGGTAG

mRNA sequence

ATGGTGTTTTACTCTTCTCTTCTCCCTTTCCTCCATTCTTTAAACCTTTATATCTCTGCAACAATCCACAAGAACTACATCTTCTTGCTCTGCAATGGCCTCCTCGTCTTCATCGTAAGAAATTCCGGTCTCATCGGCAACTCCGGCGACGAACAGAGCGGCGGAAATGGCAGGGGAGCTGAAGCTCTAGGGGCTGCAATGGCGGATGCCAGCAGAAAAATTGAGAGCAAAGTTGAAGATGTAGAAGAAAGGGAAAATGGGTTGATTGCAAAAGAAGAAGAAAGTGAAAGATTGATCACAGAAGATGAAGATGAAGAAGAAGAGGAAGAAAGATTAAATTTTTATGATGAAGAAGAAGAAGAGGAAATTGGGGAATTGAGCAATGAGGAATTGAATAAGAAATGTGAAGAATTCATTAGAAAAATGAAGGCTGGAATTAAATTTGAATCACAGCAAGTGCTTGTTTTGAATTCGGAGGCGTTTTGGGACAAACCAGGCGGAACCGGGGCGGCCAGAGGCAGTAGGGACCAAACGAAGGCGACCAAGCTCGGCCCGCACAAGCGGGTCGAATGGTCGGGCCAAGTTGGCCCGACCCTTTGGTCTGGTCTTCCTCCGGGTCGGTTTCTTGATCTTATCTCTTCCCGGTTGTCCTCGTCAGCTCATTGTGCTTTAGGGTGGTCCAAAATTACCTATAACAATGAGCATAACAGAACTGTCAAGTTTGTACTAATGACCCAGAGTTGGATTGAGAGCAAAAATGAGAAGACAAAGTCTTGCTTTTCACCCATGGATGAAAGGGTAAGTTTGAAAGAAGCTTTTGGAGTAATGGCAGGCAGGTAG

Coding sequence (CDS)

ATGGTGTTTTACTCTTCTCTTCTCCCTTTCCTCCATTCTTTAAACCTTTATATCTCTGCAACAATCCACAAGAACTACATCTTCTTGCTCTGCAATGGCCTCCTCGTCTTCATCGTAAGAAATTCCGGTCTCATCGGCAACTCCGGCGACGAACAGAGCGGCGGAAATGGCAGGGGAGCTGAAGCTCTAGGGGCTGCAATGGCGGATGCCAGCAGAAAAATTGAGAGCAAAGTTGAAGATGTAGAAGAAAGGGAAAATGGGTTGATTGCAAAAGAAGAAGAAAGTGAAAGATTGATCACAGAAGATGAAGATGAAGAAGAAGAGGAAGAAAGATTAAATTTTTATGATGAAGAAGAAGAAGAGGAAATTGGGGAATTGAGCAATGAGGAATTGAATAAGAAATGTGAAGAATTCATTAGAAAAATGAAGGCTGGAATTAAATTTGAATCACAGCAAGTGCTTGTTTTGAATTCGGAGGCGTTTTGGGACAAACCAGGCGGAACCGGGGCGGCCAGAGGCAGTAGGGACCAAACGAAGGCGACCAAGCTCGGCCCGCACAAGCGGGTCGAATGGTCGGGCCAAGTTGGCCCGACCCTTTGGTCTGGTCTTCCTCCGGGTCGGTTTCTTGATCTTATCTCTTCCCGGTTGTCCTCGTCAGCTCATTGTGCTTTAGGGTGGTCCAAAATTACCTATAACAATGAGCATAACAGAACTGTCAAGTTTGTACTAATGACCCAGAGTTGGATTGAGAGCAAAAATGAGAAGACAAAGTCTTGCTTTTCACCCATGGATGAAAGGGTAAGTTTGAAAGAAGCTTTTGGAGTAATGGCAGGCAGGTAG

Protein sequence

MVFYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGNSGDEQSGGNGRGAEALGAAMADASRKIESKVEDVEERENGLIAKEEESERLITEDEDEEEEEERLNFYDEEEEEEIGELSNEELNKKCEEFIRKMKAGIKFESQQVLVLNSEAFWDKPGGTGAARGSRDQTKATKLGPHKRVEWSGQVGPTLWSGLPPGRFLDLISSRLSSSAHCALGWSKITYNNEHNRTVKFVLMTQSWIESKNEKTKSCFSPMDERVSLKEAFGVMAGR

Homology

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BLAST of Spg006213.1 vs. NCBI nr
Match: XP_038888415.1 (histone H3.v1-like [Benincasa hispida])

HSP 1 Score: 213.8 bits (543), Expect = 1.9e-51
Identity = 129/156 (82.69%), Postives = 136/156 (87.18%), Query Frame = 0


Query: 1   MVFYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGNSGDEQSGGNGRGA 60
           MVFYSSLLPFLHSLNLYIS TIHKNY+FLLCNGLLVFIVRNSGLIGNS DEQSG N    
Sbjct: 13  MVFYSSLLPFLHSLNLYISTTIHKNYMFLLCNGLLVFIVRNSGLIGNSSDEQSGRN---- 72

Query: 61  EALGAAMADASRKIESKVEDVEERENGLIAKEEESERLITEDEDEEEEEERLNFYDEEEE 120
           EALGAAMAD +RKIESKVE  EERENGLIAKEEE+E LIT+DED   EEER NFY+EEEE
Sbjct: 73  EALGAAMADGNRKIESKVEIEEERENGLIAKEEENEELITKDED---EEERFNFYEEEEE 132

Query: 121 EEIGELSNEELNKKCEEFIRKMKAGIKFESQQVLVL 157
           EE  E+ +EELNKKCEEFIRKMK GIKFESQQV VL
Sbjct: 133 EEEEEI-DEELNKKCEEFIRKMKEGIKFESQQVFVL 160

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BLAST of Spg006213.1 vs. NCBI nr
Match: XP_022928452.1 (uncharacterized protein LOC111435260 [Cucurbita moschata])

HSP 1 Score: 198.7 bits (504), Expect = 6.4e-47
Identity = 117/156 (75.00%), Postives = 128/156 (82.05%), Query Frame = 0


Query: 1   MVFYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGNSGDEQSGGNGRGA 60
           MVFYSSLLPFLHS NLYISAT HKNY+FLLCNGLLVFIVRNSGLI  SGD  SGG+ RGA
Sbjct: 13  MVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGA 72

Query: 61  EALGAAMADASRKIESKVEDVEERENGLIAKEEESERLITEDEDEEEEEERLNFYDEEEE 120
           EAL A+MAD S KIESKVED EER NGLI K+EESER I ED+D +         D+++E
Sbjct: 73  EALEASMADGSSKIESKVEDREERGNGLIQKDEESERSIVEDDDND---------DDDDE 132

Query: 121 EEIGELSNEELNKKCEEFIRKMKAGIKFESQQVLVL 157
           EE+G LS EELNKKCEEFIRKMKAGIK ESQQ+LVL
Sbjct: 133 EEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL 159

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BLAST of Spg006213.1 vs. NCBI nr
Match: XP_023530308.1 (uncharacterized protein LOC111792915 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 197.2 bits (500), Expect = 1.9e-46
Identity = 116/156 (74.36%), Postives = 126/156 (80.77%), Query Frame = 0


Query: 1   MVFYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGNSGDEQSGGNGRGA 60
           MVFYSSLLPFLHS NLYISAT HKNY+FLLCNGLLVFIVRNSGLI  SGD  SGG+ RGA
Sbjct: 13  MVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGA 72

Query: 61  EALGAAMADASRKIESKVEDVEERENGLIAKEEESERLITEDEDEEEEEERLNFYDEEEE 120
           EAL AAMAD S KIESKVED EER NGLI K+EESER I ED+            D++++
Sbjct: 73  EALEAAMADGSSKIESKVEDREERGNGLIQKDEESERSIVEDD------------DDDDD 132

Query: 121 EEIGELSNEELNKKCEEFIRKMKAGIKFESQQVLVL 157
           EE+G LS EELNKKCEEFIRKMKAGIK ESQQ+LVL
Sbjct: 133 EEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL 156

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BLAST of Spg006213.1 vs. NCBI nr
Match: KAG6589100.1 (hypothetical protein SDJN03_17665, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 196.8 bits (499), Expect = 2.4e-46
Identity = 116/156 (74.36%), Postives = 127/156 (81.41%), Query Frame = 0


Query: 1   MVFYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGNSGDEQSGGNGRGA 60
           MVFYSSLLPFLHS NLYISAT HKNY+FLLCNGLLVFIVRNSGLI  SGD  SGG+ RGA
Sbjct: 13  MVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGA 72

Query: 61  EALGAAMADASRKIESKVEDVEERENGLIAKEEESERLITEDEDEEEEEERLNFYDEEEE 120
           EAL A+MAD S KIESKVED EER NGLI K+EESER I ED+D           ++++E
Sbjct: 73  EALEASMADGSSKIESKVEDREERGNGLIQKDEESERSIMEDDD-----------NDDDE 132

Query: 121 EEIGELSNEELNKKCEEFIRKMKAGIKFESQQVLVL 157
           EE+G LS EELNKKCEEFIRKMKAGIK ESQQ+LVL
Sbjct: 133 EEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL 157

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BLAST of Spg006213.1 vs. NCBI nr
Match: KAG7022808.1 (hypothetical protein SDJN02_16544, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 194.5 bits (493), Expect = 1.2e-45
Identity = 115/156 (73.72%), Postives = 125/156 (80.13%), Query Frame = 0


Query: 1   MVFYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGNSGDEQSGGNGRGA 60
           MVFYSSLLPFLHS NLYISAT HKNY+FLLCNGLLVFIVRNSGLI  SGD  S G+ RGA
Sbjct: 13  MVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSSGDSRGA 72

Query: 61  EALGAAMADASRKIESKVEDVEERENGLIAKEEESERLITEDEDEEEEEERLNFYDEEEE 120
           EAL A+MAD S KIESKVED EER NGLI K+EESER I ED+            D+++E
Sbjct: 73  EALEASMADGSSKIESKVEDREERGNGLIQKDEESERSIMEDD------------DDDDE 132

Query: 121 EEIGELSNEELNKKCEEFIRKMKAGIKFESQQVLVL 157
           EE+G LS EELNKKCEEFIRKMKAGIK ESQQ+LVL
Sbjct: 133 EEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL 156

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BLAST of Spg006213.1 vs. ExPASy TrEMBL
Match: A0A6J1EJY9 (uncharacterized protein LOC111435260 OS=Cucurbita moschata OX=3662 GN=LOC111435260 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 3.1e-47
Identity = 117/156 (75.00%), Postives = 128/156 (82.05%), Query Frame = 0


Query: 1   MVFYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGNSGDEQSGGNGRGA 60
           MVFYSSLLPFLHS NLYISAT HKNY+FLLCNGLLVFIVRNSGLI  SGD  SGG+ RGA
Sbjct: 13  MVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGA 72

Query: 61  EALGAAMADASRKIESKVEDVEERENGLIAKEEESERLITEDEDEEEEEERLNFYDEEEE 120
           EAL A+MAD S KIESKVED EER NGLI K+EESER I ED+D +         D+++E
Sbjct: 73  EALEASMADGSSKIESKVEDREERGNGLIQKDEESERSIVEDDDND---------DDDDE 132

Query: 121 EEIGELSNEELNKKCEEFIRKMKAGIKFESQQVLVL 157
           EE+G LS EELNKKCEEFIRKMKAGIK ESQQ+LVL
Sbjct: 133 EEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL 159

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BLAST of Spg006213.1 vs. ExPASy TrEMBL
Match: A0A6J1I0H9 (sodium/potassium/calcium exchanger 1-like OS=Cucurbita maxima OX=3661 GN=LOC111468328 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.1e-44
Identity = 119/158 (75.32%), Postives = 134/158 (84.81%), Query Frame = 0


Query: 1   MVFYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGNSGDEQSGGNG-RG 60
           MVFYSSLLPFLHSLNLYISATIHKNY+FLLCNGLLVFIVRNSGLI +SG EQ GG+G R 
Sbjct: 13  MVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSRE 72

Query: 61  AEALGAAMADASRKIESKVEDVEERENGLIAKEE-ESERLITEDEDEEEEEERLNFYDEE 120
           AEALGAAM D++  IE KVED EERENG IA+EE ESERL+TE+E ++E EE     ++ 
Sbjct: 73  AEALGAAMEDSTTIIERKVEDGEERENGFIAEEEQESERLVTEEEQQQEHEEEQE-EEKA 132

Query: 121 EEEEIGELSNEELNKKCEEFIRKMKAGIKFESQQVLVL 157
           E EE+G LSNEEL+KK EEFIRKMKAGIK ESQQVL+L
Sbjct: 133 EAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL 169

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BLAST of Spg006213.1 vs. ExPASy TrEMBL
Match: A0A0A0K349 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032240 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 7.2e-44
Identity = 117/157 (74.52%), Postives = 129/157 (82.17%), Query Frame = 0


Query: 1   MVFYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGNSGDEQSGGNGRGA 60
           MVFYSSLLPFLHSLNLYIS+TIHKNY+FLLCNGLLVFIVRNSGLIGN+ DE+S GN    
Sbjct: 13  MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTSDERSSGN---- 72

Query: 61  EALGAA-MADASRKIESKVEDVEERENGLIAKEEESERLITEDEDEEEEEERLNFYDEEE 120
           EALGAA MAD +RKIESKVE  EER NGL+  E++ E LIT   D E EEER   Y+EEE
Sbjct: 73  EALGAATMADGNRKIESKVEIEEERGNGLVVNEDKIENLIT---DNEVEEERFMSYEEEE 132

Query: 121 EEEIGELSNEELNKKCEEFIRKMKAGIKFESQQVLVL 157
           EEEI    +EELNKKCEEFIRKMKAGIKFESQQ+ +L
Sbjct: 133 EEEI----DEELNKKCEEFIRKMKAGIKFESQQLFIL 158

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BLAST of Spg006213.1 vs. ExPASy TrEMBL
Match: A0A6J1C4P4 (ATP-dependent RNA helicase MAK5 OS=Momordica charantia OX=3673 GN=LOC111007892 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 1.8e-42
Identity = 113/155 (72.90%), Postives = 121/155 (78.06%), Query Frame = 0


Query: 1   MVFYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGNSGDEQSGGNGRGA 60
           MV YSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIG SG+EQ GG     
Sbjct: 13  MVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQGGGG---- 72

Query: 61  EALGAAMADASRKIESKVEDVEERENGLIAKEEESERLITEDEDEEEEEERLNFYDEEEE 120
                       K+ESKVED EERENGL+A++EESE+LITEDE+ EEE        EEEE
Sbjct: 73  ------------KVESKVEDGEERENGLVAEQEESEKLITEDEEHEEE--------EEEE 132

Query: 121 EEIGELSNEELNKKCEEFIRKMKAGIKFESQQVLV 156
           EE G LSNEELN+KCEEFIRKMKA IKFE QQVLV
Sbjct: 133 EEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLV 143

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BLAST of Spg006213.1 vs. ExPASy TrEMBL
Match: A0A1S3CG16 (gem-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC103500515 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 9.7e-41
Identity = 116/163 (71.17%), Postives = 129/163 (79.14%), Query Frame = 0


Query: 1   MVFYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGNSGDEQSGGNGRGA 60
           MVFYSSLLPFLHSLNLYIS+TIHKNY+FLLCNGLLVFIVRNSGLIGN+ +EQS  N    
Sbjct: 1   MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTCNEQSSRN---- 60

Query: 61  EALGA-AMADASRKIESK--VEDVEERENGLIAKEEESERLITEDEDEEEE----EERLN 120
           EALGA  MAD +RKIESK  VE  EER NGL+  EE+ E LIT++EDEEE     EE   
Sbjct: 61  EALGAVTMADGNRKIESKVEVEVEEERRNGLVVNEEKFENLITDNEDEEERFISYEEEEE 120

Query: 121 FYDEEEEEEIGELSNEELNKKCEEFIRKMKAGIKFESQQVLVL 157
             +EEEEEE  E  +EELNKKCEEFIRKMKAGIKFESQQ+ +L
Sbjct: 121 EEEEEEEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 159

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BLAST of Spg006213.1 vs. TAIR 10
Match: AT2G04515.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04495.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 1.3e-05
Identity = 56/166 (33.73%), Postives = 88/166 (53.01%), Query Frame = 0


Query: 5   SSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGNSGDEQSGGNGRG--AEA 64
           SSL   LH L +Y S  + K Y+FLLCNG++ FI+   G    + D  S G       + 
Sbjct: 37  SSLQQRLHLLAMY-SNLVDKKYMFLLCNGIVGFIL---GSFHGNSDSLSHGKAINIVEQT 96

Query: 65  LGAAMADASRKIESKVEDVEERENGLIAKEEESERLITEDEDEE-----EEEE------- 124
               + D      +KV  + E  N  ++KEEE   +++ +E+EE     +E+E       
Sbjct: 97  KEVGIKDLKETKVNKVVALLEESN--VSKEEEGRVVLSREEEEEVALVVKEDEGILVQDL 156

Query: 125 ---RLNFYDEEEEEEIGELSNEELNKKCEEFIRKMKAGIKFESQQV 154
              RL+ +D+++      LS+E+LNKKCE+FIRKMKA I++  + +
Sbjct: 157 SITRLDDHDDDDAINDSLLSSEDLNKKCEDFIRKMKAEIRYGKRSI 196

[Close]

BLAST of Spg006213.1 vs. TAIR 10
Match: AT3G13130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte; Has 140 Blast hits to 132 proteins in 41 species: Archae - 2; Bacteria - 4; Metazoa - 29; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 2.2e-05
Identity = 50/167 (29.94%), Postives = 90/167 (53.89%), Query Frame = 0


Query: 18  ISATIHKNYIFLLCNGLLVFIVRNSGLIGNS----------------GD----------E 77
           ++  + KNY+FLLCNGL+V + + SGL+ +S                GD          E
Sbjct: 41  VTHAVDKNYMFLLCNGLVVVVAKCSGLVASSKPIEKIWSNTDKTFDYGDFESYTTILELE 100

Query: 78  QSGGNGRGAEALGAAMADASRKIESKVEDVEERENGLIAKEEESERLITEDEDEEEEEER 137
               +G G E+  A   + + + ++K ++ E+ E     +E++ +  + +++ EEE   R
Sbjct: 101 YKSDHGIGTESFLA--EEVTVEEDTKHQETEDNE-----EEDDDDNTLADNDGEEECGLR 160

Query: 138 LNFYDEEEEEEIGELSN--EELNKKCEEFIRKMKAGIKFESQQVLVL 157
               +EEEE  +G +++  EE+NKK +EFIRKMK  ++ E+++ L+L
Sbjct: 161 GGSINEEEEGNVGVMTSTEEEMNKKFDEFIRKMKEELRIEAKRHLIL 200

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BLAST of Spg006213.1 vs. TAIR 10
Match: AT2G04495.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 2.5e-04
Identity = 60/170 (35.29%), Postives = 86/170 (50.59%), Query Frame = 0


Query: 5   SSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGNSGD-------------E 64
           SSL   LH L++Y S  + K Y+FLLCNG++ FI+      GNS               +
Sbjct: 37  SSLQQRLHLLSMY-SNLVDKKYMFLLCNGIVGFIL--GSFHGNSESLSQGKAINIIEQTK 96

Query: 65  QSGGNGRGAEALGAAMADASRKIESKVEDVEERENGLIAK----EEESERLITEDEDE-- 124
           + G        L   +A    K  SK E+ EE E G +      EEE   L+ E ++E  
Sbjct: 97  EVGIKDLKETKLKKVVALLEEKSVSK-EEEEEEEGGRVVLFRGIEEEEVSLVVEVDEEIL 156

Query: 125 EEEEERLNFYDEEEEEEIGE--LSNEELNKKCEEFIRKMKAGIKFESQQV 154
            ++   +   D  ++EEI +  LS E+LNKKCE+FIRKMKA I+F  + +
Sbjct: 157 VQDLAIIRVDDHHDDEEINDSLLSVEDLNKKCEDFIRKMKAEIQFGKRSI 202

The following BLAST results are available for this feature:

BLAST of Spg006213.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888415.1	1.9e-51	82.69	histone H3.v1-like [Benincasa hispida]	[more]
XP_022928452.1	6.4e-47	75.00	uncharacterized protein LOC111435260 [Cucurbita moschata]	[more]
XP_023530308.1	1.9e-46	74.36	uncharacterized protein LOC111792915 [Cucurbita pepo subsp. pepo]	[more]
KAG6589100.1	2.4e-46	74.36	hypothetical protein SDJN03_17665, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7022808.1	1.2e-45	73.72	hypothetical protein SDJN02_16544, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Spg006213.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg006213.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJY9	3.1e-47	75.00	uncharacterized protein LOC111435260 OS=Cucurbita moschata OX=3662 GN=LOC1114352...	[more]
A0A6J1I0H9	1.1e-44	75.32	sodium/potassium/calcium exchanger 1-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A0A0K349	7.2e-44	74.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032240 PE=4 SV=1	[more]
A0A6J1C4P4	1.8e-42	72.90	ATP-dependent RNA helicase MAK5 OS=Momordica charantia OX=3673 GN=LOC111007892 P...	[more]
A0A1S3CG16	9.7e-41	71.17	gem-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC103500515 PE=4 SV=1	[more]

BLAST of Spg006213.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04515.1	1.3e-05	33.73	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G13130.1	2.2e-05	29.94	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G04495.1	2.5e-04	35.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 88..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..96
None	No IPR available	PANTHER	PTHR34947	TRANSMEMBRANE PROTEIN	coord: 2..155
None	No IPR available	PANTHER	PTHR34947:SF3	TRANSMEMBRANE PROTEIN	coord: 2..155

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg006213	Spg006213	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg006213.1-cds	Spg006213.1-cds-scaffold4:4790201..4790667	CDS
Spg006213.1-cds	Spg006213.1-cds-scaffold4:4791801..4792073	CDS
Spg006213.1-cds	Spg006213.1-cds-scaffold4:4793387..4793486	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg006213.1	Spg006213.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane