Sgr029718.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr029718.1
Type	mRNA
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	SKP1-like protein
Location	tig00153449: 2128848 .. 2130164 (+)
Sequence length	468
RNA-Seq Expression	Sgr029718.1
Synteny	Sgr029718.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCGTCCAAGAAGATCATCCTCAAGAGCTCCGATGGCGAGCCTTTCGAAGTCGACGAGGCCGTCGCGCTCGAGTCTCAGACTATCAGGCACATGATCGAGGACGATTGTGCCGATAACGGCATCCCTCTTCCTAACGTCACCAGCAAGATCTTGGCCAAGGTCATCGAGTACTGCCGGAAGCACGTTGATGCTACCAACGACGAGCCGCGCACCTCTGAAGAAGACCTCAAGGCCTGGGACCGCGAGTTCGTTAATGTTGATCAGGCTACTCTTTTTGATCTTATTCTGGTGAGATCTCCTGGATTATCAAGGGTTTTGGATCTGTCTTTGTTGTAACTGTGAACCCTGTACGGTTTACCTATTTGGTGTGATTATGTTGTTGAATTGAGTCACTGCGATGCAAGATTAGGGATTCTGAATTTTTTATTGGGCAAAAAGATTGTGAGGGCTCGCTGTGACCTTCTTTGTCGCAGATAACTGTTCGTTGAGTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTTATTTTTAATTTTTTTTTTATTCTTCTTTATGTTTATCGACGCATGCAATTGTGCTGTTAGGAATCGGTATCATTTGATATGTTGGAAATGGAACGTTCATCTCAAAGGGAAAGTTCTACTGGAAATTATGTAGCATTAAAGTTGTCCGTTGTAGCTATGCAAACATCAATTAGTATGGTGTCTAAATAATGGATTAAGATTCGGTAGGCATGGCCATTGCACTTTGATGATTGAAGCCGGTGATGCAAAAGATGTAGTTATCTTAATCTTTTGGCCTTCTTGCGGAGATTGGGATTAATAAAATGCTGTCATAGATATCTATATATATATGGTTATGGGTTGTCTAGATTTCAGCTTTCTTATTTTTCCAGTGTTAACTCGGTCCTTGTCAAATGATTGTTGCTTAGGTTAATTGCACATGTATATGCCTTAGATAGACTTGATTTGTTTTTCATGCTTCTATATGTTAGCAGCTTTGATTTACCACATTCTACATTAAAGCCATATTCTTGTTGCAGATAATTTCAAGCTGCCTGGGTATTTTTGACTATTCTCGTTGTTCATAGTTTCTTGATTTGGCGCCATATAAAATTTGTTCTTTTATTCTACCCTGCAGGCTGCAAATTATCTGAACATCAAGAGCTTGTTGGACCTGACATGCCAGACTGTAGCTGACATGATCAAGGGAAAGACCCCTGAGGAGATCCGAAAGACCTTTAACATCAAGAATGACTTCACACCGGAGGAAGAGGAGGAAGTTCGTAGGGAGAATCAGTGGGCTTTTGAATGA

mRNA sequence

ATGTCGTCGTCCAAGAAGATCATCCTCAAGAGCTCCGATGGCGAGCCTTTCGAAGTCGACGAGGCCGTCGCGCTCGAGTCTCAGACTATCAGGCACATGATCGAGGACGATTGTGCCGATAACGGCATCCCTCTTCCTAACGTCACCAGCAAGATCTTGGCCAAGGTCATCGAGTACTGCCGGAAGCACGTTGATGCTACCAACGACGAGCCGCGCACCTCTGAAGAAGACCTCAAGGCCTGGGACCGCGAGTTCGTTAATGTTGATCAGGCTACTCTTTTTGATCTTATTCTGGCTGCAAATTATCTGAACATCAAGAGCTTGTTGGACCTGACATGCCAGACTGTAGCTGACATGATCAAGGGAAAGACCCCTGAGGAGATCCGAAAGACCTTTAACATCAAGAATGACTTCACACCGGAGGAAGAGGAGGAAGTTCGTAGGGAGAATCAGTGGGCTTTTGAATGA

Coding sequence (CDS)

ATGTCGTCGTCCAAGAAGATCATCCTCAAGAGCTCCGATGGCGAGCCTTTCGAAGTCGACGAGGCCGTCGCGCTCGAGTCTCAGACTATCAGGCACATGATCGAGGACGATTGTGCCGATAACGGCATCCCTCTTCCTAACGTCACCAGCAAGATCTTGGCCAAGGTCATCGAGTACTGCCGGAAGCACGTTGATGCTACCAACGACGAGCCGCGCACCTCTGAAGAAGACCTCAAGGCCTGGGACCGCGAGTTCGTTAATGTTGATCAGGCTACTCTTTTTGATCTTATTCTGGCTGCAAATTATCTGAACATCAAGAGCTTGTTGGACCTGACATGCCAGACTGTAGCTGACATGATCAAGGGAAAGACCCCTGAGGAGATCCGAAAGACCTTTAACATCAAGAATGACTTCACACCGGAGGAAGAGGAGGAAGTTCGTAGGGAGAATCAGTGGGCTTTTGAATGA

Protein sequence

MSSSKKIILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYCRKHVDATNDEPRTSEEDLKAWDREFVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE

Homology

[Close]

BLAST of Sgr029718.1 vs. NCBI nr
Match: XP_022145436.1 (SKP1-like protein 1A [Momordica charantia])

HSP 1 Score: 298.5 bits (763), Expect = 3.3e-77
Identity = 149/155 (96.13%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MSSSKKIILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYC 60
           MSSSKKIILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNV+SKILAKVIEYC
Sbjct: 1   MSSSKKIILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNVSSKILAKVIEYC 60

Query: 61  RKHVDATNDEPRTSEEDLKAWDREFVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMI 120
           RKHVDA+N EPR SEEDLKAWDR+FVNVDQATLFDLILAANYLNIK+LLDLTCQTVADMI
Sbjct: 61  RKHVDASNSEPRASEEDLKAWDRDFVNVDQATLFDLILAANYLNIKNLLDLTCQTVADMI 120

Query: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

[Close]

BLAST of Sgr029718.1 vs. NCBI nr
Match: XP_022965297.1 (SKP1-like protein 1A [Cucurbita maxima] >KAG6577790.1 SKP1-like protein 1A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015829.1 SKP1-like protein 1A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 288.5 bits (737), Expect = 3.4e-74
Identity = 144/155 (92.90%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MSSSKKIILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYC 60
           MSSSKKI LKSSDGE FE+DE VALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYC
Sbjct: 1   MSSSKKITLKSSDGESFEIDEVVALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYC 60

Query: 61  RKHVDATNDEPRTSEEDLKAWDREFVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMI 120
            KHVDA++ +PR SEEDLKAWDR+FVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMI
Sbjct: 61  HKHVDASSADPRVSEEDLKAWDRDFVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMI 120

Query: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

[Close]

BLAST of Sgr029718.1 vs. NCBI nr
Match: XP_022923340.1 (SKP1-like protein 1A [Cucurbita moschata])

HSP 1 Score: 287.0 bits (733), Expect = 1.0e-73
Identity = 143/155 (92.26%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MSSSKKIILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYC 60
           MSSSKKI LKSSDGE FE+DE VALESQTIRHMIEDDCADNGIPLPNVTSKIL KVIEYC
Sbjct: 1   MSSSKKITLKSSDGESFEIDEVVALESQTIRHMIEDDCADNGIPLPNVTSKILVKVIEYC 60

Query: 61  RKHVDATNDEPRTSEEDLKAWDREFVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMI 120
            KHVDA++ +PR SEEDLKAWDR+FVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMI
Sbjct: 61  HKHVDASSADPRVSEEDLKAWDRDFVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMI 120

Query: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

[Close]

BLAST of Sgr029718.1 vs. NCBI nr
Match: XP_038903121.1 (SKP1-like protein 1A [Benincasa hispida])

HSP 1 Score: 285.4 bits (729), Expect = 2.9e-73
Identity = 142/155 (91.61%), Postives = 150/155 (96.77%), Query Frame = 0


Query: 1   MSSSKKIILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYC 60
           MSSSKKI LKSSDG+ FEVDEAVAL+SQTIRHMIEDDCADNGIPLPNVTS ILAKVIEYC
Sbjct: 1   MSSSKKITLKSSDGDSFEVDEAVALQSQTIRHMIEDDCADNGIPLPNVTSNILAKVIEYC 60

Query: 61  RKHVDATNDEPRTSEEDLKAWDREFVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMI 120
           RKHVDA++ +PR S++DLKAWDR+FVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMI
Sbjct: 61  RKHVDASSADPRLSDDDLKAWDRDFVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMI 120

Query: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

[Close]

BLAST of Sgr029718.1 vs. NCBI nr
Match: KAE8010659.1 (hypothetical protein FH972_007010 [Carpinus fangiana])

HSP 1 Score: 284.6 bits (727), Expect = 4.9e-73
Identity = 143/155 (92.26%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MSSSKKIILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYC 60
           MSSSKKI LKSSDGE FEVDEAVALESQTI+HMIEDDCADNGIPLPNVTSKILAKVIEYC
Sbjct: 1   MSSSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYC 60

Query: 61  RKHVDATNDEPRTSEEDLKAWDREFVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMI 120
           +KHV+A N E RTS++DLKAWD EFV VDQATLFDLILAANYLNIKSLLDLTCQTVADMI
Sbjct: 61  KKHVEAANPEERTSDDDLKAWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMI 120

Query: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

[Close]

BLAST of Sgr029718.1 vs. ExPASy Swiss-Prot
Match: Q39255 (SKP1-like protein 1A OS=Arabidopsis thaliana OX=3702 GN=SKP1A PE=1 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 5.5e-67
Identity = 126/159 (79.25%), Postives = 142/159 (89.31%), Query Frame = 0


Query: 3   SSKKIILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYCRK 62
           S+KKI+LKSSDGE FEV+EAVALESQTI HM+EDDC DNG+PLPNVTSKILAKVIEYC++
Sbjct: 2   SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKR 61

Query: 63  HVDATNDEPR------TSEEDLKAWDREFVNVDQATLFDLILAANYLNIKSLLDLTCQTV 122
           HV+A   +        TS++DLKAWD +F+ +DQATLF+LILAANYLNIK+LLDLTCQTV
Sbjct: 62  HVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTV 121

Query: 123 ADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           ADMIKGKTPEEIR TFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 122 ADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160

[Close]

BLAST of Sgr029718.1 vs. ExPASy Swiss-Prot
Match: Q9FHW7 (SKP1-like protein 1B OS=Arabidopsis thaliana OX=3702 GN=SKP1B PE=1 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 7.2e-67
Identity = 130/171 (76.02%), Postives = 140/171 (81.87%), Query Frame = 0


Query: 1   MSSSKKIILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYC 60
           MS+ +KI LKSSDGE FE+DEAVALESQTI+HMIEDDC DNGIPLPNVTSKIL+KVIEYC
Sbjct: 1   MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYC 60

Query: 61  RKHVDATNDEPRT----------------SEEDLKAWDREFVNVDQATLFDLILAANYLN 120
           ++HV+A      T                S+EDLK WD EF+ VDQ TLFDLILAANYLN
Sbjct: 61  KRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLN 120

Query: 121 IKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           IK LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 IKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171

[Close]

BLAST of Sgr029718.1 vs. ExPASy Swiss-Prot
Match: Q6PL11 (SKP1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SKP1 PE=1 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 2.0e-64
Identity = 129/166 (77.71%), Postives = 134/166 (80.72%), Query Frame = 0


Query: 5   KKIILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYCRKHV 64
           K I LKSSDGE FEV+EAVA+ESQTIRHMIEDDCADNGIPLPNV SKIL+KVIEYC KHV
Sbjct: 8   KMITLKSSDGEEFEVEEAVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYCNKHV 67

Query: 65  ---------------DATNDEPRTSEEDLKAWDREFVNVDQATLFDLILAANYLNIKSLL 124
                           A    P  S EDLK WD +FV VDQATLFDLILAANYLNIK LL
Sbjct: 68  HAAAAAASKAADDAASAAAAVPPPSGEDLKNWDADFVKVDQATLFDLILAANYLNIKGLL 127

Query: 125 DLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           DLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEE+RRENQWAFE
Sbjct: 128 DLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE 173

[Close]

BLAST of Sgr029718.1 vs. ExPASy Swiss-Prot
Match: Q651E8 (SKP1-like protein 20 OS=Oryza sativa subsp. japonica OX=39947 GN=SKP20 PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 7.2e-59
Identity = 120/165 (72.73%), Postives = 133/165 (80.61%), Query Frame = 0


Query: 7   IILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYCRKHVD- 66
           I L+S +G+ FEV EAVA+ESQTIRHMIED CAD GIPLPNV++KIL+KVIEYC KHV+ 
Sbjct: 11  ITLRSCEGQVFEVAEAVAMESQTIRHMIEDKCADTGIPLPNVSAKILSKVIEYCSKHVEA 70

Query: 67  -------ATNDEP--------RTSEEDLKAWDREFVNVDQATLFDLILAANYLNIKSLLD 126
                  A  D P        +  E++LK +D EFV VDQ+TLFDLILAANYLNIK LLD
Sbjct: 71  RGGAAAAADGDAPAPAAVEANKAVEDELKTFDAEFVKVDQSTLFDLILAANYLNIKGLLD 130

Query: 127 LTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           LTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 131 LTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 175

[Close]

BLAST of Sgr029718.1 vs. ExPASy Swiss-Prot
Match: O49484 (SKP1-like protein 11 OS=Arabidopsis thaliana OX=3702 GN=ASK11 PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 4.7e-58
Identity = 114/154 (74.03%), Postives = 132/154 (85.71%), Query Frame = 0


Query: 3   SSKKIILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYCRK 62
           SSK I+L SSDG+ FEV+EAVA++SQTI HM+EDDC  +GIPL NV SKIL KVIEYC+K
Sbjct: 2   SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKK 61

Query: 63  -HVDATNDEPRTSEEDLKAWDREFVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMIK 122
            HVD  N     SEEDL  WD +F++++Q+T+F+LILAANYLNIKSLLDLTCQTVADMIK
Sbjct: 62  HHVDEANP---ISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIK 121

Query: 123 GKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           GKTPEEIR TFNI+NDFTPEEEE VR+ENQWAFE
Sbjct: 122 GKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152

[Close]

BLAST of Sgr029718.1 vs. ExPASy TrEMBL
Match: A0A6J1CWB0 (SKP1-like protein OS=Momordica charantia OX=3673 GN=LOC111014883 PE=3 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.6e-77
Identity = 149/155 (96.13%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MSSSKKIILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYC 60
           MSSSKKIILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNV+SKILAKVIEYC
Sbjct: 1   MSSSKKIILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNVSSKILAKVIEYC 60

Query: 61  RKHVDATNDEPRTSEEDLKAWDREFVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMI 120
           RKHVDA+N EPR SEEDLKAWDR+FVNVDQATLFDLILAANYLNIK+LLDLTCQTVADMI
Sbjct: 61  RKHVDASNSEPRASEEDLKAWDRDFVNVDQATLFDLILAANYLNIKNLLDLTCQTVADMI 120

Query: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

[Close]

BLAST of Sgr029718.1 vs. ExPASy TrEMBL
Match: A0A6J1HJY3 (SKP1-like protein OS=Cucurbita maxima OX=3661 GN=LOC111465205 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.7e-74
Identity = 144/155 (92.90%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MSSSKKIILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYC 60
           MSSSKKI LKSSDGE FE+DE VALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYC
Sbjct: 1   MSSSKKITLKSSDGESFEIDEVVALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYC 60

Query: 61  RKHVDATNDEPRTSEEDLKAWDREFVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMI 120
            KHVDA++ +PR SEEDLKAWDR+FVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMI
Sbjct: 61  HKHVDASSADPRVSEEDLKAWDRDFVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMI 120

Query: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

[Close]

BLAST of Sgr029718.1 vs. ExPASy TrEMBL
Match: A0A6J1EBI5 (SKP1-like protein OS=Cucurbita moschata OX=3662 GN=LOC111431062 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.8e-74
Identity = 143/155 (92.26%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MSSSKKIILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYC 60
           MSSSKKI LKSSDGE FE+DE VALESQTIRHMIEDDCADNGIPLPNVTSKIL KVIEYC
Sbjct: 1   MSSSKKITLKSSDGESFEIDEVVALESQTIRHMIEDDCADNGIPLPNVTSKILVKVIEYC 60

Query: 61  RKHVDATNDEPRTSEEDLKAWDREFVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMI 120
            KHVDA++ +PR SEEDLKAWDR+FVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMI
Sbjct: 61  HKHVDASSADPRVSEEDLKAWDRDFVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMI 120

Query: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

[Close]

BLAST of Sgr029718.1 vs. ExPASy TrEMBL
Match: A0A5N6QXB4 (SKP1-like protein OS=Carpinus fangiana OX=176857 GN=FH972_007010 PE=3 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.4e-73
Identity = 143/155 (92.26%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MSSSKKIILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYC 60
           MSSSKKI LKSSDGE FEVDEAVALESQTI+HMIEDDCADNGIPLPNVTSKILAKVIEYC
Sbjct: 1   MSSSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYC 60

Query: 61  RKHVDATNDEPRTSEEDLKAWDREFVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMI 120
           +KHV+A N E RTS++DLKAWD EFV VDQATLFDLILAANYLNIKSLLDLTCQTVADMI
Sbjct: 61  KKHVEAANPEERTSDDDLKAWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMI 120

Query: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

[Close]

BLAST of Sgr029718.1 vs. ExPASy TrEMBL
Match: A0A2I4EKZ9 (SKP1-like protein OS=Juglans regia OX=51240 GN=LOC109015676 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.1e-73
Identity = 143/155 (92.26%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 1   MSSSKKIILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYC 60
           MSSSKKI LKSSDGE FEVDEAVALESQTI+HMIEDDCADNGIPLPNVTSKILAKVIEYC
Sbjct: 1   MSSSKKITLKSSDGESFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYC 60

Query: 61  RKHVDATNDEPRTSEEDLKAWDREFVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMI 120
           +KHV+  N E RTSE+DLKAWD EFV VDQATLFDLILAANYLNIKSLLDLTCQTVADMI
Sbjct: 61  KKHVEPANSEDRTSEDDLKAWDMEFVRVDQATLFDLILAANYLNIKSLLDLTCQTVADMI 120

Query: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

[Close]

BLAST of Sgr029718.1 vs. TAIR 10
Match: AT1G75950.1 (S phase kinase-associated protein 1 )

HSP 1 Score: 255.0 bits (650), Expect = 3.9e-68
Identity = 126/159 (79.25%), Postives = 142/159 (89.31%), Query Frame = 0


Query: 3   SSKKIILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYCRK 62
           S+KKI+LKSSDGE FEV+EAVALESQTI HM+EDDC DNG+PLPNVTSKILAKVIEYC++
Sbjct: 2   SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKR 61

Query: 63  HVDATNDEPR------TSEEDLKAWDREFVNVDQATLFDLILAANYLNIKSLLDLTCQTV 122
           HV+A   +        TS++DLKAWD +F+ +DQATLF+LILAANYLNIK+LLDLTCQTV
Sbjct: 62  HVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTV 121

Query: 123 ADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           ADMIKGKTPEEIR TFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 122 ADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160

[Close]

BLAST of Sgr029718.1 vs. TAIR 10
Match: AT5G42190.1 (E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein )

HSP 1 Score: 254.6 bits (649), Expect = 5.1e-68
Identity = 130/171 (76.02%), Postives = 140/171 (81.87%), Query Frame = 0


Query: 1   MSSSKKIILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYC 60
           MS+ +KI LKSSDGE FE+DEAVALESQTI+HMIEDDC DNGIPLPNVTSKIL+KVIEYC
Sbjct: 1   MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYC 60

Query: 61  RKHVDATNDEPRT----------------SEEDLKAWDREFVNVDQATLFDLILAANYLN 120
           ++HV+A      T                S+EDLK WD EF+ VDQ TLFDLILAANYLN
Sbjct: 61  KRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLN 120

Query: 121 IKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           IK LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 IKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171

[Close]

BLAST of Sgr029718.1 vs. TAIR 10
Match: AT4G34210.1 (SKP1-like 11 )

HSP 1 Score: 225.3 bits (573), Expect = 3.3e-59
Identity = 114/154 (74.03%), Postives = 132/154 (85.71%), Query Frame = 0


Query: 3   SSKKIILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYCRK 62
           SSK I+L SSDG+ FEV+EAVA++SQTI HM+EDDC  +GIPL NV SKIL KVIEYC+K
Sbjct: 2   SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKK 61

Query: 63  -HVDATNDEPRTSEEDLKAWDREFVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMIK 122
            HVD  N     SEEDL  WD +F++++Q+T+F+LILAANYLNIKSLLDLTCQTVADMIK
Sbjct: 62  HHVDEANP---ISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIK 121

Query: 123 GKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           GKTPEEIR TFNI+NDFTPEEEE VR+ENQWAFE
Sbjct: 122 GKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152

[Close]

BLAST of Sgr029718.1 vs. TAIR 10
Match: AT4G34470.1 (SKP1-like 12 )

HSP 1 Score: 224.2 bits (570), Expect = 7.4e-59
Identity = 113/154 (73.38%), Postives = 131/154 (85.06%), Query Frame = 0


Query: 3   SSKKIILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYCRK 62
           SSK I+L SSDG+ FEV+EAVA++SQTI HM+EDDC  +GIPL NV SKIL KVIEYC+K
Sbjct: 2   SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKK 61

Query: 63  -HVDATNDEPRTSEEDLKAWDREFVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMIK 122
            HVD  N     SEEDL  WD +F++++Q+T+F+LILAANYLNIKSL DLTCQTVADMIK
Sbjct: 62  YHVDEANP---ISEEDLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTVADMIK 121

Query: 123 GKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           GKTPEEIR TFNI+NDFTPEEEE VR+ENQWAFE
Sbjct: 122 GKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152

[Close]

BLAST of Sgr029718.1 vs. TAIR 10
Match: AT1G20140.1 (SKP1-like 4 )

HSP 1 Score: 219.5 bits (558), Expect = 1.8e-57
Identity = 110/160 (68.75%), Postives = 128/160 (80.00%), Query Frame = 0


Query: 3   SSKKIILKSSDGEPFEVDEAVALESQTIRHMIEDDCADNGIPLPNVTSKILAKVIEYCRK 62
           + K IILKSSDGE FE++EAVA++SQTI+HMIEDDCADNGIPLPNVT  ILAKVIEYC+K
Sbjct: 4   TKKMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKK 63

Query: 63  HVDATNDE-------PRTSEEDLKAWDREFVNVDQATLFDLILAANYLNIKSLLDLTCQT 122
           HV+A  +             ++LK WD EFV VDQ TLFDLILAANYLNI  LLDLTC+ 
Sbjct: 64  HVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKA 123

Query: 123 VADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
           VAD ++GKTPE++R  FNIKND+TPEEE EVR EN+WAFE
Sbjct: 124 VADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163

The following BLAST results are available for this feature:

BLAST of Sgr029718.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145436.1	3.3e-77	96.13	SKP1-like protein 1A [Momordica charantia]	[more]
XP_022965297.1	3.4e-74	92.90	SKP1-like protein 1A [Cucurbita maxima] >KAG6577790.1 SKP1-like protein 1A, part...	[more]
XP_022923340.1	1.0e-73	92.26	SKP1-like protein 1A [Cucurbita moschata]	[more]
XP_038903121.1	2.9e-73	91.61	SKP1-like protein 1A [Benincasa hispida]	[more]
KAE8010659.1	4.9e-73	92.26	hypothetical protein FH972_007010 [Carpinus fangiana]	[more]

BLAST of Sgr029718.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39255	5.5e-67	79.25	SKP1-like protein 1A OS=Arabidopsis thaliana OX=3702 GN=SKP1A PE=1 SV=1	[more]
Q9FHW7	7.2e-67	76.02	SKP1-like protein 1B OS=Arabidopsis thaliana OX=3702 GN=SKP1B PE=1 SV=1	[more]
Q6PL11	2.0e-64	77.71	SKP1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SKP1 PE=1 SV=1	[more]
Q651E8	7.2e-59	72.73	SKP1-like protein 20 OS=Oryza sativa subsp. japonica OX=39947 GN=SKP20 PE=1 SV=1	[more]
O49484	4.7e-58	74.03	SKP1-like protein 11 OS=Arabidopsis thaliana OX=3702 GN=ASK11 PE=1 SV=1	[more]

BLAST of Sgr029718.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CWB0	1.6e-77	96.13	SKP1-like protein OS=Momordica charantia OX=3673 GN=LOC111014883 PE=3 SV=1	[more]
A0A6J1HJY3	1.7e-74	92.90	SKP1-like protein OS=Cucurbita maxima OX=3661 GN=LOC111465205 PE=3 SV=1	[more]
A0A6J1EBI5	4.8e-74	92.26	SKP1-like protein OS=Cucurbita moschata OX=3662 GN=LOC111431062 PE=3 SV=1	[more]
A0A5N6QXB4	2.4e-73	92.26	SKP1-like protein OS=Carpinus fangiana OX=176857 GN=FH972_007010 PE=3 SV=1	[more]
A0A2I4EKZ9	3.1e-73	92.26	SKP1-like protein OS=Juglans regia OX=51240 GN=LOC109015676 PE=3 SV=1	[more]

BLAST of Sgr029718.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75950.1	3.9e-68	79.25	S phase kinase-associated protein 1	[more]
AT5G42190.1	5.1e-68	76.02	E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein	[more]
AT4G34210.1	3.3e-59	74.03	SKP1-like 11	[more]
AT4G34470.1	7.4e-59	73.38	SKP1-like 12	[more]
AT1G20140.1	1.8e-57	68.75	SKP1-like 4	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001232	S-phase kinase-associated protein 1-like	SMART	SM00512	skp1_3	coord: 4..105 e-value: 9.7E-54 score: 194.5
IPR016897	S-phase kinase-associated protein 1	PIRSF	PIRSF028729	SCF_Skp	coord: 1..155 e-value: 8.4E-69 score: 228.5
IPR016897	S-phase kinase-associated protein 1	PANTHER	PTHR11165	SKP1	coord: 1..155
IPR011333	SKP1/BTB/POZ domain superfamily	GENE3D	3.30.710.10	Potassium Channel Kv1.1; Chain A	coord: 1..155 e-value: 3.8E-76 score: 256.7
IPR011333	SKP1/BTB/POZ domain superfamily	SUPERFAMILY	54695	POZ domain	coord: 6..66
IPR016073	SKP1 component, POZ domain	PFAM	PF03931	Skp1_POZ	coord: 5..64 e-value: 1.0E-29 score: 102.5
IPR016072	SKP1 component, dimerisation	PFAM	PF01466	Skp1	coord: 106..153 e-value: 1.9E-30 score: 104.6
None	No IPR available	PANTHER	PTHR11165:SF145	PUTATIVE-RELATED	coord: 1..155
None	No IPR available	CDD	cd18322	BTB_POZ_SKP1	coord: 6..120 e-value: 3.07547E-61 score: 182.792
IPR036296	SKP1-like, dimerisation domain superfamily	SUPERFAMILY	81382	Skp1 dimerisation domain-like	coord: 78..153

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sgr029718	Sgr029718	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sgr029718.1.exon1	Sgr029718.1.exon1	exon
Sgr029718.1.exon2	Sgr029718.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Sgr029718.1	cds.Sgr029718.1	CDS
cds.Sgr029718.1	cds.Sgr029718.1_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sgr029718.1	Sgr029718.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0097602	cullin family protein binding
molecular_function	GO:0016301	kinase activity