Sgr028648.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr028648.1
Type	mRNA
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Unknown protein
Location	tig00153204: 3103771 .. 3104645 (-)
Sequence length	501
RNA-Seq Expression	Sgr028648.1
Synteny	Sgr028648.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGCTACCCGATTTTGCTTCCCCAATTCCAAAGCTTCCTCTTCAAGCTCCAGAAAAGGGCGAAATAATGAAACCCCGGATCAGAAAATTATGACGCACAGCCAAAAAGAGCATCACCACTCGCCCCCCAATCAAAAGGCAAAAAACAGAGCGGAGAAGGAGGAGGAGAAGAAGAAGAGAAAGGTGGAGGCAAGGAAAGATTTGCTTATCTTCTGTACTGTTCACAGACGTACTGCCCCTCCCATACCCCGGTCTTTAGAGAGAGGAAAAAAACCCTAAAAAGAAAAAGGGGCTCAATTTAAAAAAAATGAGAAAAATGGATATTACTGGATATAACAGGTTGTTTTACTGCAGAAGACCGTGCACCACACGTGCAGTCCAGTCTTCTCTGCAAGAAAAGCATATTATTAGTCCAAGAACTTTTGCTGGTACTTGGCTTTGTTTTGTGGTAGGGTCTCTTTGATAATTGATTAATGAAGACTTTAAATTTGTAGAATTGTGCTGGCAACTTGCATGTTTAGTTACCCAAATCTAAAACCCACCCACCTCCACTCTACTTTATCACCTGAATTTATAACTCATAGTTTATATAGTAGTCCGCATCTCAACTGTATAAAGAAATTAATTAATTAATTAATTACAGAAACCCTTTTTACATTGTTAATCCATTTTAAACTTCTGTGTTTTTATTTGCTTAAGGTATTCAAGTGAAATTGGAGGAGCAAGAGAAAAAAAGAAAAAATGGAGCACCTTTAGGAAAAGAAAGAAATAAAAGAGGGGGAAAAAAAGAAAAGGAAAAAGAGGGGGCACGGTCTTCGGGGGGACACGTGTCAGTGGGTTTAGATGGAAAAAAAGCGAAGTTGGGAGTGTAG

mRNA sequence

ATGGGGGCTACCCGATTTTGCTTCCCCAATTCCAAAGCTTCCTCTTCAAGCTCCAGAAAAGGGCGAAATAATGAAACCCCGGATCAGAAAATTATGACGCACAGCCAAAAAGAGCATCACCACTCGCCCCCCAATCAAAAGGCAAAAAACAGAGCGGAGAAGGAGGAGGAGAAGAAGAAGAGAAAGGTGGAGGCAAGGAAAGATTTGCTTATCTTCTGTACTGTTCACAGACGTACTGCCCCTCCCATACCCCGAAGACCGTGCACCACACGTGCAGTCCAGTCTTCTCTGCAAGAAAAGCATATTATTAGTCCAAGAACTTTTGCTGGTATTCAAGTGAAATTGGAGGAGCAAGAGAAAAAAAGAAAAAATGGAGCACCTTTAGGAAAAGAAAGAAATAAAAGAGGGGGAAAAAAAGAAAAGGAAAAAGAGGGGGCACGGTCTTCGGGGGGACACGTGTCAGTGGGTTTAGATGGAAAAAAAGCGAAGTTGGGAGTGTAG

Coding sequence (CDS)

ATGGGGGCTACCCGATTTTGCTTCCCCAATTCCAAAGCTTCCTCTTCAAGCTCCAGAAAAGGGCGAAATAATGAAACCCCGGATCAGAAAATTATGACGCACAGCCAAAAAGAGCATCACCACTCGCCCCCCAATCAAAAGGCAAAAAACAGAGCGGAGAAGGAGGAGGAGAAGAAGAAGAGAAAGGTGGAGGCAAGGAAAGATTTGCTTATCTTCTGTACTGTTCACAGACGTACTGCCCCTCCCATACCCCGAAGACCGTGCACCACACGTGCAGTCCAGTCTTCTCTGCAAGAAAAGCATATTATTAGTCCAAGAACTTTTGCTGGTATTCAAGTGAAATTGGAGGAGCAAGAGAAAAAAAGAAAAAATGGAGCACCTTTAGGAAAAGAAAGAAATAAAAGAGGGGGAAAAAAAGAAAAGGAAAAAGAGGGGGCACGGTCTTCGGGGGGACACGTGTCAGTGGGTTTAGATGGAAAAAAAGCGAAGTTGGGAGTGTAG

Protein sequence

MGATRFCFPNSKASSSSSRKGRNNETPDQKIMTHSQKEHHHSPPNQKAKNRAEKEEEKKKRKVEARKDLLIFCTVHRRTAPPIPRRPCTTRAVQSSLQEKHIISPRTFAGIQVKLEEQEKKRKNGAPLGKERNKRGGKKEKEKEGARSSGGHVSVGLDGKKAKLGV

Homology

The following BLAST results are available for this feature:

BLAST of Sgr028648.1 vs.


Match Name	E-value	Identity	Description

BLAST of Sgr028648.1 vs.


Match Name	E-value	Identity	Description

BLAST of Sgr028648.1 vs.


Match Name	E-value	Identity	Description

BLAST of Sgr028648.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 45..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..69

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sgr028648	Sgr028648	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sgr028648.1.exon3	Sgr028648.1.exon3	exon
Sgr028648.1.exon2	Sgr028648.1.exon2	exon
Sgr028648.1.exon1	Sgr028648.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Sgr028648.1	cds.Sgr028648.1_3	CDS
cds.Sgr028648.1	cds.Sgr028648.1_2	CDS
cds.Sgr028648.1	cds.Sgr028648.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sgr028648.1	Sgr028648.1-protein	polypeptide