Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCACCTTCACAATCTCAGAAGGAAGCTCAAGTTCATTCTCAGCCATCGTCACATTCCCGAGCCAAAAACCAAACCCGAATGGCTTCCAAGCCTCCATCACCATCAAAATCAACCCCTCCTCATTCTTCAGTTGCTTCCAAGTCTCCATCACCATCAGGCATAGCCTCTCCATTGCATGATGCTTCGAAGCCTTTGTCACCAGCAGTTGCAGCTGCAGCTCCTCGATCCCGAGTTGCTTCAAAGCCACCGTCTCCATCTCAAACATCTAGTAGAAACCATCTACATTCAAAACTAACATCACAACTCAGACTGAAAGCTGATTCTCCACCTTCATCGTCTTCACAGTCAGCATTTCCACCTCAAGCTTCTTCTACATTGCGGTCACCATCTCAAGAAAATTCTCGACAACAACCATTGAAAAAGACCTCTCGGGTTCAGTCTCCATCTCATTTGTCCAGTAAACCTACTGGCCAATCAACTTCACAACACATTGCATCTCCTGCAGCCATTGAAGATCAAACAACAAATGGAATTATTTCTCATCCCGCAAATCAATTGCCACAAGCAAAATCTAAAAGCAAGGAAAGTCAGTTGCAAACCAAATCAAAGGAGTTTCAAAATCAAACTTGAAACCAGTGGAATCCAAAGCATCAAAAAATCAGCCTCAAACCAAGAAAGAGCTCACATCTAAGAAACTTCCAATCCCCATTCAAACCAGTATTCTTCCGAAAACCCCGCTCAGTCCATTCAAACCATAGAAAATGGTATAGAGACCTCTCTAGAATCACAGGCAGAGACAAAAGAAAGTGAAGAAAAAAAGAATGACAAGGAAGATCTGGCAAAGATAGCCAATGCATCTACTAAATCCACATTAATCACACCACTGAAAGCTTTTCATCGTTTGAACCAGAGGATAGAGATTCAGAAGAGAAAGAAATCATGGAAGGCATTTCAAAAGCTTTTCAGAAACTGAACATTAAATGTTCAGGTGAAGAAAATCCAAAGAGCTTCGTATCACTCATTGGTGACAACAAAGGGGCGTCAATGCACTTAGTTTCCGGTAAAGCCAGAAGAGAAAGTTCAATCCACATCCACCGTGAGTATAAGTGGAATCCAGATCATAGCCCTAAAAATTCCACAGACATGAAGGAAATTTCAAGCACAAAACACCAAAAGATTCAAGATCTGAAGAGGATCCACCCCTGAGGTTATGCATTAACAACAATTTACAAGGTATCAATAACTCAATCCTGTCTAATAGCTCAATTACTGAGAGAAATCCTGGAGTTAAATTGAAATTCTTTAGAGAACCAACTAAATCTGAAGATAAATCACAGCCTCTCCACGCTCGAAAGGCTAAGTATACTGCGAAACCTGCCGAGAGGCTTACCTATGAACCCACAGTAAGACGAAGATGCCTCAGGGGGCTGTTCATGGAGTCGAGCGATTCTGAGCTCGACAACCCAGAAAAGCCCCGACGCCATGGCTGCCGCTACAGCAATTGCAAAGGAAAAGAGGTCGAAATTCTGTAA
mRNA sequence
ATGCCACCTTCACAATCTCAGAAGGAAGCTCAAGTTCATTCTCAGCCATCGTCACATTCCCGAGCCAAAAACCAAACCCGAATGGCTTCCAAGCCTCCATCACCATCAAAATCAACCCCTCCTCATTCTTCAGTTGCTTCCAAGTCTCCATCACCATCAGGCATAGCCTCTCCATTGCATGATGCTTCGAAGCCTTTGTCACCAGCAGTTGCAGCTGCAGCTCCTCGATCCCGAGTTGCTTCAAAGCCACCGTCTCCATCTCAAACATCTAGTAGAAACCATCTACATTCAAAACTAACATCACAACTCAGACTGAAAGCTGATTCTCCACCTTCATCGTCTTCACAGTCAGCATTTCCACCTCAAGCTTCTTCTACATTGCGGTCACCATCTCAAGAAAATTCTCGACAACAACCATTGAAAAAGACCTCTCGGGTTCAGTCTCCATCTCATTTGTCCAGTAAACCTACTGGCCAATCAACTTCACAACACATTGCATCTCCTGCAGCCATTGAAGATCAAACAACAAATGGAATTATTTCTCATCCCGCAAATCAATTGCCACAAGCAAAATCTAAAAGCAAGGAAAAGGATAGAGATTCAGAAGAGAAAGAAATCATGGAAGGCATTTCAAAAGCTTTTCAGAAACTGAACATTAAATGTTCAGGTGAAGAAAATCCAAAGAGCTTCGTATCACTCATTGGTGACAACAAAGGGGCGTCAATGCACTTAGTTTCCGGAAATTTCAAGCACAAAACACCAAAAGATTCAAGATCTGAAGAGGATCCACCCCTGAGGTTATGCATTAACAACAATTTACAAGGTATCAATAACTCAATCCTGTCTAATAGCTCAATTACTGAGAGAAATCCTGGAGTTAAATTGAAATTCTTTAGAGAACCAACTAAATCTGAAGATAAATCACAGCCTCTCCACGCTCGAAAGGCTAAGTATACTGCGAAACCTGCCGAGAGGCTTACCTATGAACCCACAGTAAGACGAAGATGCCTCAGGGGGCTGTTCATGGAGTCGAGCGATTCTGAGCTCGACAACCCAGAAAAGCCCCGACGCCATGGCTGCCGCTACAGCAATTGCAAAGGAAAAGAGGTCGAAATTCTGTAA
Coding sequence (CDS)
ATGCCACCTTCACAATCTCAGAAGGAAGCTCAAGTTCATTCTCAGCCATCGTCACATTCCCGAGCCAAAAACCAAACCCGAATGGCTTCCAAGCCTCCATCACCATCAAAATCAACCCCTCCTCATTCTTCAGTTGCTTCCAAGTCTCCATCACCATCAGGCATAGCCTCTCCATTGCATGATGCTTCGAAGCCTTTGTCACCAGCAGTTGCAGCTGCAGCTCCTCGATCCCGAGTTGCTTCAAAGCCACCGTCTCCATCTCAAACATCTAGTAGAAACCATCTACATTCAAAACTAACATCACAACTCAGACTGAAAGCTGATTCTCCACCTTCATCGTCTTCACAGTCAGCATTTCCACCTCAAGCTTCTTCTACATTGCGGTCACCATCTCAAGAAAATTCTCGACAACAACCATTGAAAAAGACCTCTCGGGTTCAGTCTCCATCTCATTTGTCCAGTAAACCTACTGGCCAATCAACTTCACAACACATTGCATCTCCTGCAGCCATTGAAGATCAAACAACAAATGGAATTATTTCTCATCCCGCAAATCAATTGCCACAAGCAAAATCTAAAAGCAAGGAAAAGGATAGAGATTCAGAAGAGAAAGAAATCATGGAAGGCATTTCAAAAGCTTTTCAGAAACTGAACATTAAATGTTCAGGTGAAGAAAATCCAAAGAGCTTCGTATCACTCATTGGTGACAACAAAGGGGCGTCAATGCACTTAGTTTCCGGAAATTTCAAGCACAAAACACCAAAAGATTCAAGATCTGAAGAGGATCCACCCCTGAGGTTATGCATTAACAACAATTTACAAGGTATCAATAACTCAATCCTGTCTAATAGCTCAATTACTGAGAGAAATCCTGGAGTTAAATTGAAATTCTTTAGAGAACCAACTAAATCTGAAGATAAATCACAGCCTCTCCACGCTCGAAAGGCTAAGTATACTGCGAAACCTGCCGAGAGGCTTACCTATGAACCCACAGTAAGACGAAGATGCCTCAGGGGGCTGTTCATGGAGTCGAGCGATTCTGAGCTCGACAACCCAGAAAAGCCCCGACGCCATGGCTGCCGCTACAGCAATTGCAAAGGAAAAGAGGTCGAAATTCTGTAA
Protein sequence
MPPSQSQKEAQVHSQPSSHSRAKNQTRMASKPPSPSKSTPPHSSVASKSPSPSGIASPLHDASKPLSPAVAAAAPRSRVASKPPSPSQTSSRNHLHSKLTSQLRLKADSPPSSSSQSAFPPQASSTLRSPSQENSRQQPLKKTSRVQSPSHLSSKPTGQSTSQHIASPAAIEDQTTNGIISHPANQLPQAKSKSKEKDRDSEEKEIMEGISKAFQKLNIKCSGEENPKSFVSLIGDNKGASMHLVSGNFKHKTPKDSRSEEDPPLRLCINNNLQGINNSILSNSSITERNPGVKLKFFREPTKSEDKSQPLHARKAKYTAKPAERLTYEPTVRRRCLRGLFMESSDSELDNPEKPRRHGCRYSNCKGKEVEIL
Homology
BLAST of Sgr028519.1 vs. NCBI nr
Match:
XP_022144159.1 (cell wall protein RBR3 [Momordica charantia])
HSP 1 Score: 382.9 bits (982), Expect = 3.2e-102
Identity = 264/504 (52.38%), Postives = 299/504 (59.33%), Query Frame = 0
Query: 1 MPPSQSQKEAQVHSQPSSHSRAKNQTRMASKPPSPSKSTPPHSSVASKSPSPSGIASPLH 60
MPPSQS+KE+QVHS S+SRAKNQ R+ASK PS K++P +S S S SG ASP
Sbjct: 1 MPPSQSKKESQVHSHSPSYSRAKNQPRIASKSPSLLKASPTVASNKSPSSPASGKASPSK 60
Query: 61 DASKPLSPAVAAAAPRSRVASKPPSPSQTSSRNHLHSKLTS-QLRLKADSPPSSSSQSAF 120
DASKP SPAV AAPR R++S PPSPSQTSSRNHL+ K TS Q +LKADS PSSSS+SAF
Sbjct: 61 DASKPSSPAV--AAPRPRISSVPPSPSQTSSRNHLNPKPTSKQSKLKADSQPSSSSRSAF 120
Query: 121 PPQASSTLRSPSQENSRQQPLKKTSRVQSPSHLSSKPTGQSTS-QHIASPAAIEDQTTNG 180
PQASST RSPSQ NS+QQP KKT T QSTS QH A AA EDQTTNG
Sbjct: 121 RPQASSTARSPSQANSKQQPSKKT-------------TAQSTSLQHTAFSAATEDQTTNG 180
Query: 181 IISHPANQLPQAKSKSKE------------------------------------------ 240
+ SH AN+ QA+ K +E
Sbjct: 181 VTSHSANKSSQARPKGRESQSQTKSKQSPKSKASKNQPQIKEELTSKNTSNPQSNQNSSE 240
Query: 241 -------------------------------------------------------KDRDS 300
+DRDS
Sbjct: 241 NPTRSDQSIENGQDPSLESQAESKEDEETKEKATNASATSTLISSSESSSPYEEPEDRDS 300
Query: 301 EEKEIM-EG-ISKAFQKLNIKCSGEENPKSFVSLIGDNKGASMHLVS------------- 360
++KE+M EG ISKAF KL I SGEENPKSF++LIGDNKG SM+L+S
Sbjct: 301 QKKELMGEGDISKAFPKLKINYSGEENPKSFITLIGDNKGTSMNLLSGKGNRESSIHIRR 360
Query: 361 -----------------GNFKHKTPKDSRSEEDPPLRLCINNNLQGINNSILSNSSITER 374
GNF HKT +DSR+ EDPPLRL INNN QGINNSILSNSS TER
Sbjct: 361 EYQSNPDQSPKSSTEIEGNFNHKTTEDSRTVEDPPLRLYINNNTQGINNSILSNSSFTER 420
BLAST of Sgr028519.1 vs. NCBI nr
Match:
XP_023002262.1 (cell wall protein RBR3-like [Cucurbita maxima])
HSP 1 Score: 350.1 bits (897), Expect = 2.3e-92
Identity = 253/554 (45.67%), Postives = 288/554 (51.99%), Query Frame = 0
Query: 1 MPPSQSQKEAQVHSQPSSHSRAKNQTRMASKPPSPSKSTPPHSSVASKSPSPSGIASPLH 60
M PS+S K+A+VHSQPSSHSRAK QTR A+KPPS SK TP S ++KSP+ S ASP H
Sbjct: 78 MLPSKSHKKAKVHSQPSSHSRAKKQTRTATKPPSASKVTPQSSVSSNKSPTTSAKASPSH 137
Query: 61 DASKPLSPA------------------------------------------------VAA 120
DASKP S A AA
Sbjct: 138 DASKPSSSAGKVSPSHDTSKLSSPAGKGKVSPSRDTSMPSPPAGKAFPSRDASQPSSAAA 197
Query: 121 AAPRSRVASKPPSPSQTSSRNHLHSKLTSQLRLKADSPPSSSSQSAFPPQASSTLRSPSQ 180
AAPRS + SKPPSPSQTSS+NHLHSK TSQ RLKADS PSS S+ AF PQASS RSPS
Sbjct: 198 AAPRSHIRSKPPSPSQTSSKNHLHSKQTSQSRLKADSQPSSPSRPAFSPQASSIPRSPSH 257
Query: 181 ENSRQQPLKKTSRVQSPSHLSSKPTGQSTSQHIA-SPAAIEDQTTNGIISHPANQLPQAK 240
ENSRQQP KK SRVQSPSHLSSK T QSTSQ + SPA I DQTT ++SHPA+Q P+A+
Sbjct: 258 ENSRQQPSKKASRVQSPSHLSSKATAQSTSQQLTESPATIGDQTTKRVVSHPADQSPRAR 317
Query: 241 SKSKE------------------------------------------------------- 300
KSKE
Sbjct: 318 CKSKENQVQTKSKQSPKPDLKPVEFKASKHQPETMEEFISKNTSYPLSNEDFSEIPIIID 377
Query: 301 ----------------------------------------------------------KD 360
++
Sbjct: 378 ETIENGPEPSLESQTESQESKEIKSYEEDLEKTTNALQINASKSKLITSAEITSPFEPEN 437
Query: 361 RDSEEKEIMEGISKAFQKLNIKCSGEENPKSFVSLIGDNKGASMHLVS------------ 363
DS+++ ME + KAFQ LNIK EENPKSF +L GDNKGASMHL+S
Sbjct: 438 SDSQQEGTMEDLPKAFQTLNIKYP-EENPKSFTTLTGDNKGASMHLISGEATKESSIHIH 497
BLAST of Sgr028519.1 vs. NCBI nr
Match:
KAG6585587.1 (hypothetical protein SDJN03_18320, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 349.7 bits (896), Expect = 3.0e-92
Identity = 256/555 (46.13%), Postives = 289/555 (52.07%), Query Frame = 0
Query: 1 MPPSQSQKEAQVHSQPSSHSRAKNQTRMASKPPSPSKSTPPHSSVASKSPSPSGIASPLH 60
M PS+S K+A+VHSQPSSHSRAK QTR A+KPPS SK TP S ++KSP+ S ASP H
Sbjct: 70 MLPSKSHKKAKVHSQPSSHSRAKKQTRTATKPPSASKVTPQSSVSSNKSPTTSAKASPSH 129
Query: 61 DASKPLSPA------------------------------------------------VAA 120
DASKP S A AA
Sbjct: 130 DASKPSSSAGKVSPSHDTSKLSSPAGKGKVSPSHDTSKPSSPAGKAFPSRDASQPSSSAA 189
Query: 121 AAPRSRVASKPPSPSQTSSRNHLHSKLTSQLRLKADSP-PSSSSQSAFPPQASSTLRSPS 180
AAPRS++ SKPPSPSQTSS+NH SK TSQ RLKADSP PSS S AF PQASS RSPS
Sbjct: 190 AAPRSQIRSKPPSPSQTSSKNHPQSKPTSQSRLKADSPQPSSPSWPAFSPQASSIPRSPS 249
Query: 181 QENSRQQPLKKTSRVQSPSHLSSKPTGQSTSQHIA-SPAAIEDQTTNGIISHPANQLPQA 240
ENSRQQP KK SRVQSPSHLSSKPT QSTSQ + SPA IEDQTT ++SHPA+Q P A
Sbjct: 250 HENSRQQPSKKASRVQSPSHLSSKPTAQSTSQQLTESPATIEDQTTKRVVSHPADQSPGA 309
Query: 241 KSKSKE------------------------------------------------------ 300
+ K KE
Sbjct: 310 RCKIKENQVQTKSKQSPKPDLKPVEFKASKHQPETMEEFISKNTSYPHSDQDFSEIPIII 369
Query: 301 -----------------------------------------------------------K 360
+
Sbjct: 370 DETNENGPEPSLESQTESQESKEIKSYEEDLEKTTNALQINASKSKLITSAEITSPFEPE 429
Query: 361 DRDSEEKEIMEGISKAFQKLNIKCSGEENPKSFVSLIGDNKGASMHLVS----------- 363
+ DS+++ ME +SKAFQ LNIK EENPKSF +L GDNKGASMHL+S
Sbjct: 430 NSDSQQEGTMEDLSKAFQTLNIKYP-EENPKSFTTLTGDNKGASMHLLSGEATKESAIHI 489
BLAST of Sgr028519.1 vs. NCBI nr
Match:
XP_022951875.1 (cell wall protein RBR3-like [Cucurbita moschata])
HSP 1 Score: 348.6 bits (893), Expect = 6.7e-92
Identity = 253/554 (45.67%), Postives = 289/554 (52.17%), Query Frame = 0
Query: 1 MPPSQSQKEAQVHSQPSSHSRAKNQTRMASKPPSPSKSTPPHSSVASKSPSPSGIASPLH 60
M PS+S K+A+VHSQPSSHSRAK QTR A+KPPS SK TP S ++KSP+ S ASP H
Sbjct: 70 MLPSKSHKKAKVHSQPSSHSRAKKQTRTATKPPSASKVTPQSSVSSNKSPTTSAKASPSH 129
Query: 61 DASKPLSPA------------------------------------------------VAA 120
DASKP S A AA
Sbjct: 130 DASKPSSSAGKVSPSHDTSKLSSPAGKGKVSPSHDTSKPSSPAGKAFPSRDASQPSSSAA 189
Query: 121 AAPRSRVASKPPSPSQTSSRNHLHSKLTSQLRLKADSPPSSSSQSAFPPQASSTLRSPSQ 180
AAPRS++ SKPPSPSQTSS+NH SK TSQ RLKADS PSS S+ AF PQASS RSPS
Sbjct: 190 AAPRSQIRSKPPSPSQTSSKNHPQSKPTSQSRLKADSQPSSPSRPAFSPQASSIPRSPSH 249
Query: 181 ENSRQQPLKKTSRVQSPSHLSSKPTGQSTSQHIA-SPAAIEDQTTNGIISHPANQLPQAK 240
ENSRQQP KK SRVQSPSHLSSKPT QSTSQ + SPA I DQTT ++SHPA+Q P+A+
Sbjct: 250 ENSRQQPSKKASRVQSPSHLSSKPTAQSTSQQLTESPATIGDQTTKRVVSHPADQSPRAR 309
Query: 241 SKSKE------------------------------------------------------- 300
K +E
Sbjct: 310 CKRRENQVQTKSKQSPKPDLKPVEFKASKHQPETMEEFISKNTSYPHSDQDFSEIPIIID 369
Query: 301 ----------------------------------------------------------KD 360
++
Sbjct: 370 ETIENGPETSLESQTESQESKEIKSYEEDLEKTTNALQINASKSKLITSAEITSPFEPEN 429
Query: 361 RDSEEKEIMEGISKAFQKLNIKCSGEENPKSFVSLIGDNKGASMHLVS------------ 363
DS+++ ME +SKAFQ LNIK EENPKSF +L GDNKGASMHL+S
Sbjct: 430 SDSQQEGTMEDLSKAFQTLNIKYP-EENPKSFTTLTGDNKGASMHLLSGEATKESSIHIH 489
BLAST of Sgr028519.1 vs. NCBI nr
Match:
KAG7020502.1 (hypothetical protein SDJN02_17187, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 343.2 bits (879), Expect = 2.8e-90
Identity = 253/555 (45.59%), Postives = 288/555 (51.89%), Query Frame = 0
Query: 1 MPPSQSQKEAQVHSQPSSHSRAKNQTRMASKPPSPSKSTPPHSSVASKSPSPSGIASPLH 60
M PS+S K+A+VHSQPSSHSRAK QTR A+KPPS SK TP S ++KSP+ S ASP H
Sbjct: 70 MLPSKSHKKAKVHSQPSSHSRAKKQTRTATKPPSASKVTPQSSVSSNKSPTTSAKASPSH 129
Query: 61 DASKPLSPA------------------------------------------------VAA 120
DASKP S A AA
Sbjct: 130 DASKPSSSAGKVSPSHDTSKLSSPAGKGKVSPSHDTSKPSSPAGKAFPSRDASQPSSSAA 189
Query: 121 AAPRSRVASKPPSPSQTSSRNHLHSKLTSQLRLKADSPPSSS-SQSAFPPQASSTLRSPS 180
AAPRS++ SKPPSPSQTSS+NH SK TSQ RLKADSP SSS S+ AF PQASS RSPS
Sbjct: 190 AAPRSQIRSKPPSPSQTSSKNHPQSKPTSQSRLKADSPQSSSPSRPAFSPQASSIPRSPS 249
Query: 181 QENSRQQPLKKTSRVQSPSHLSSKPTGQSTSQHIA-SPAAIEDQTTNGIISHPANQLPQA 240
ENSRQQP KK S VQSPSHLSSKPT QSTSQ + SPA I DQTT ++SHPA+Q P A
Sbjct: 250 HENSRQQPSKKASLVQSPSHLSSKPTAQSTSQQLTESPATIGDQTTKRVVSHPADQSPGA 309
Query: 241 KSKSKE------------------------------------------------------ 300
+ K +E
Sbjct: 310 RCKIRENQVQTKSKQSPKPDLKPVEFKASKHQPETMEEFISKNTSYPHSDQDFSEIPIII 369
Query: 301 -----------------------------------------------------------K 360
+
Sbjct: 370 DETNENGPEPSLESQTESQESKEIKSYEEDLEKTTNALQINASKSKLITSAEITSPFEPE 429
Query: 361 DRDSEEKEIMEGISKAFQKLNIKCSGEENPKSFVSLIGDNKGASMHLVS----------- 363
+ DS+++ ME +SKAFQ LNIK EENPKSF +L GDNKGASMHL+S
Sbjct: 430 NSDSQQEGTMEDLSKAFQTLNIKYP-EENPKSFTTLTGDNKGASMHLLSGEATKESAIHI 489
BLAST of Sgr028519.1 vs. ExPASy TrEMBL
Match:
A0A6J1CRH0 (cell wall protein RBR3 OS=Momordica charantia OX=3673 GN=LOC111013918 PE=4 SV=1)
HSP 1 Score: 382.9 bits (982), Expect = 1.6e-102
Identity = 264/504 (52.38%), Postives = 299/504 (59.33%), Query Frame = 0
Query: 1 MPPSQSQKEAQVHSQPSSHSRAKNQTRMASKPPSPSKSTPPHSSVASKSPSPSGIASPLH 60
MPPSQS+KE+QVHS S+SRAKNQ R+ASK PS K++P +S S S SG ASP
Sbjct: 1 MPPSQSKKESQVHSHSPSYSRAKNQPRIASKSPSLLKASPTVASNKSPSSPASGKASPSK 60
Query: 61 DASKPLSPAVAAAAPRSRVASKPPSPSQTSSRNHLHSKLTS-QLRLKADSPPSSSSQSAF 120
DASKP SPAV AAPR R++S PPSPSQTSSRNHL+ K TS Q +LKADS PSSSS+SAF
Sbjct: 61 DASKPSSPAV--AAPRPRISSVPPSPSQTSSRNHLNPKPTSKQSKLKADSQPSSSSRSAF 120
Query: 121 PPQASSTLRSPSQENSRQQPLKKTSRVQSPSHLSSKPTGQSTS-QHIASPAAIEDQTTNG 180
PQASST RSPSQ NS+QQP KKT T QSTS QH A AA EDQTTNG
Sbjct: 121 RPQASSTARSPSQANSKQQPSKKT-------------TAQSTSLQHTAFSAATEDQTTNG 180
Query: 181 IISHPANQLPQAKSKSKE------------------------------------------ 240
+ SH AN+ QA+ K +E
Sbjct: 181 VTSHSANKSSQARPKGRESQSQTKSKQSPKSKASKNQPQIKEELTSKNTSNPQSNQNSSE 240
Query: 241 -------------------------------------------------------KDRDS 300
+DRDS
Sbjct: 241 NPTRSDQSIENGQDPSLESQAESKEDEETKEKATNASATSTLISSSESSSPYEEPEDRDS 300
Query: 301 EEKEIM-EG-ISKAFQKLNIKCSGEENPKSFVSLIGDNKGASMHLVS------------- 360
++KE+M EG ISKAF KL I SGEENPKSF++LIGDNKG SM+L+S
Sbjct: 301 QKKELMGEGDISKAFPKLKINYSGEENPKSFITLIGDNKGTSMNLLSGKGNRESSIHIRR 360
Query: 361 -----------------GNFKHKTPKDSRSEEDPPLRLCINNNLQGINNSILSNSSITER 374
GNF HKT +DSR+ EDPPLRL INNN QGINNSILSNSS TER
Sbjct: 361 EYQSNPDQSPKSSTEIEGNFNHKTTEDSRTVEDPPLRLYINNNTQGINNSILSNSSFTER 420
BLAST of Sgr028519.1 vs. ExPASy TrEMBL
Match:
A0A6J1KJ10 (cell wall protein RBR3-like OS=Cucurbita maxima OX=3661 GN=LOC111496164 PE=4 SV=1)
HSP 1 Score: 350.1 bits (897), Expect = 1.1e-92
Identity = 253/554 (45.67%), Postives = 288/554 (51.99%), Query Frame = 0
Query: 1 MPPSQSQKEAQVHSQPSSHSRAKNQTRMASKPPSPSKSTPPHSSVASKSPSPSGIASPLH 60
M PS+S K+A+VHSQPSSHSRAK QTR A+KPPS SK TP S ++KSP+ S ASP H
Sbjct: 78 MLPSKSHKKAKVHSQPSSHSRAKKQTRTATKPPSASKVTPQSSVSSNKSPTTSAKASPSH 137
Query: 61 DASKPLSPA------------------------------------------------VAA 120
DASKP S A AA
Sbjct: 138 DASKPSSSAGKVSPSHDTSKLSSPAGKGKVSPSRDTSMPSPPAGKAFPSRDASQPSSAAA 197
Query: 121 AAPRSRVASKPPSPSQTSSRNHLHSKLTSQLRLKADSPPSSSSQSAFPPQASSTLRSPSQ 180
AAPRS + SKPPSPSQTSS+NHLHSK TSQ RLKADS PSS S+ AF PQASS RSPS
Sbjct: 198 AAPRSHIRSKPPSPSQTSSKNHLHSKQTSQSRLKADSQPSSPSRPAFSPQASSIPRSPSH 257
Query: 181 ENSRQQPLKKTSRVQSPSHLSSKPTGQSTSQHIA-SPAAIEDQTTNGIISHPANQLPQAK 240
ENSRQQP KK SRVQSPSHLSSK T QSTSQ + SPA I DQTT ++SHPA+Q P+A+
Sbjct: 258 ENSRQQPSKKASRVQSPSHLSSKATAQSTSQQLTESPATIGDQTTKRVVSHPADQSPRAR 317
Query: 241 SKSKE------------------------------------------------------- 300
KSKE
Sbjct: 318 CKSKENQVQTKSKQSPKPDLKPVEFKASKHQPETMEEFISKNTSYPLSNEDFSEIPIIID 377
Query: 301 ----------------------------------------------------------KD 360
++
Sbjct: 378 ETIENGPEPSLESQTESQESKEIKSYEEDLEKTTNALQINASKSKLITSAEITSPFEPEN 437
Query: 361 RDSEEKEIMEGISKAFQKLNIKCSGEENPKSFVSLIGDNKGASMHLVS------------ 363
DS+++ ME + KAFQ LNIK EENPKSF +L GDNKGASMHL+S
Sbjct: 438 SDSQQEGTMEDLPKAFQTLNIKYP-EENPKSFTTLTGDNKGASMHLISGEATKESSIHIH 497
BLAST of Sgr028519.1 vs. ExPASy TrEMBL
Match:
A0A6J1GK50 (cell wall protein RBR3-like OS=Cucurbita moschata OX=3662 GN=LOC111454611 PE=4 SV=1)
HSP 1 Score: 348.6 bits (893), Expect = 3.2e-92
Identity = 253/554 (45.67%), Postives = 289/554 (52.17%), Query Frame = 0
Query: 1 MPPSQSQKEAQVHSQPSSHSRAKNQTRMASKPPSPSKSTPPHSSVASKSPSPSGIASPLH 60
M PS+S K+A+VHSQPSSHSRAK QTR A+KPPS SK TP S ++KSP+ S ASP H
Sbjct: 70 MLPSKSHKKAKVHSQPSSHSRAKKQTRTATKPPSASKVTPQSSVSSNKSPTTSAKASPSH 129
Query: 61 DASKPLSPA------------------------------------------------VAA 120
DASKP S A AA
Sbjct: 130 DASKPSSSAGKVSPSHDTSKLSSPAGKGKVSPSHDTSKPSSPAGKAFPSRDASQPSSSAA 189
Query: 121 AAPRSRVASKPPSPSQTSSRNHLHSKLTSQLRLKADSPPSSSSQSAFPPQASSTLRSPSQ 180
AAPRS++ SKPPSPSQTSS+NH SK TSQ RLKADS PSS S+ AF PQASS RSPS
Sbjct: 190 AAPRSQIRSKPPSPSQTSSKNHPQSKPTSQSRLKADSQPSSPSRPAFSPQASSIPRSPSH 249
Query: 181 ENSRQQPLKKTSRVQSPSHLSSKPTGQSTSQHIA-SPAAIEDQTTNGIISHPANQLPQAK 240
ENSRQQP KK SRVQSPSHLSSKPT QSTSQ + SPA I DQTT ++SHPA+Q P+A+
Sbjct: 250 ENSRQQPSKKASRVQSPSHLSSKPTAQSTSQQLTESPATIGDQTTKRVVSHPADQSPRAR 309
Query: 241 SKSKE------------------------------------------------------- 300
K +E
Sbjct: 310 CKRRENQVQTKSKQSPKPDLKPVEFKASKHQPETMEEFISKNTSYPHSDQDFSEIPIIID 369
Query: 301 ----------------------------------------------------------KD 360
++
Sbjct: 370 ETIENGPETSLESQTESQESKEIKSYEEDLEKTTNALQINASKSKLITSAEITSPFEPEN 429
Query: 361 RDSEEKEIMEGISKAFQKLNIKCSGEENPKSFVSLIGDNKGASMHLVS------------ 363
DS+++ ME +SKAFQ LNIK EENPKSF +L GDNKGASMHL+S
Sbjct: 430 SDSQQEGTMEDLSKAFQTLNIKYP-EENPKSFTTLTGDNKGASMHLLSGEATKESSIHIH 489
BLAST of Sgr028519.1 vs. ExPASy TrEMBL
Match:
A0A6J1HD15 (pollen-specific leucine-rich repeat extensin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111462498 PE=4 SV=1)
HSP 1 Score: 283.9 bits (725), Expect = 9.8e-73
Identity = 204/406 (50.25%), Postives = 251/406 (61.82%), Query Frame = 0
Query: 1 MPPSQSQKEAQVHSQPSSHSRAKNQTRMASKPPSPSKSTPPHSSVASKSPSPSGIASPLH 60
MPP A V S+ SHSRAKNQTR+ SKPPSPSK+TP S ++KSP SG ASP
Sbjct: 72 MPP-----PANVRSKSPSHSRAKNQTRLVSKPPSPSKTTPQSSVDSNKSPLVSGKASPSQ 131
Query: 61 DA-SKPLSPAVAAAAPRSRVASKPPSPSQTSSRNHLHSKLTSQLRLKADSPPSSSSQSAF 120
+A SKP SP AA APR R+ SK PSPS + SQ R ADS P SSS+SAF
Sbjct: 132 EASSKPPSP--AATAPRRRIVSKSPSPSSQA----------SQSRFTADSQPPSSSRSAF 191
Query: 121 PPQASSTLRSPSQENSRQQPLKKTSRVQSPSHLSSKPTGQSTSQHIASPAAIEDQT-TNG 180
PQ S EN + TS+ S H S+K + ++ Q DQT NG
Sbjct: 192 SPQT-------SLENQPETKEDLTSKNNSNPH-SNKNSSKTPIQ--------SDQTIENG 251
Query: 181 IISHPANQLPQAKSKSKEKDRDSEEKEIMEGISKAFQKLNIKCSGEENPKSFVSLIGDNK 240
+ + P +Q Q+K + ++DS+++E ME ++KAFQKLNIK S +ENPKSF +LIG+NK
Sbjct: 252 LETSPESQ-EQSKETKENLEKDSKQEESMEDLAKAFQKLNIKYSDKENPKSFTTLIGNNK 311
Query: 241 GASMHLVS------------------------------GNFKHKTPKDSRSEEDPPLRLC 300
GASMHL+S GNF HKTP+DSR+EE+P +LC
Sbjct: 312 GASMHLLSGEPKADSSIHIHRQYKNNPVQIAKSFTEIEGNFNHKTPQDSRTEENPVQKLC 371
Query: 301 INNNLQGINNSILSNSSITERNPGVKLKFFREPTKSEDKSQPLHARKAKYTAKPAERLTY 360
IN N+Q +NNSI+ +SS TE +PG+ LKF RE TKS+D+ Q AKPA+R+T+
Sbjct: 372 ININVQDMNNSIMLDSSFTENDPGINLKFPRESTKSKDELQ---------VAKPAQRVTH 431
Query: 361 EPTVRRRCLRGLFMESSDSELDNPEKPRRHGCRYS-NCKGKEVEIL 374
EP VRRRCLRGL MESSDSE+DNPEKPRRHGCRYS CKGK VE L
Sbjct: 432 EPAVRRRCLRGLLMESSDSEVDNPEKPRRHGCRYSRGCKGKNVETL 434
BLAST of Sgr028519.1 vs. ExPASy TrEMBL
Match:
A0A6J1K9X9 (probable serine/threonine-protein kinase samkC OS=Cucurbita maxima OX=3661 GN=LOC111492428 PE=4 SV=1)
HSP 1 Score: 283.1 bits (723), Expect = 1.7e-72
Identity = 206/406 (50.74%), Postives = 252/406 (62.07%), Query Frame = 0
Query: 1 MPPSQSQKEAQVHSQPSSHSRAKNQTRMASKPPSPSKSTPPHSSVASKSPSPSGIASPLH 60
MPP A V S+ S SRAKNQTR SKPPSPSK+TP S ++KSP G ASP
Sbjct: 72 MPP-----PANVRSKSPSQSRAKNQTRPVSKPPSPSKTTPQSSVDSNKSPLVLGKASPSQ 131
Query: 61 DA-SKPLSPAVAAAAPRSRVASKPPSPSQTSSRNHLHSKLTSQLRLKADSPPSSSSQSAF 120
+A SKP SP AA APR R+ASK PSPS + SQ R KADS P SSS+SAF
Sbjct: 132 EASSKPPSP--AATAPRRRIASKSPSPSSQA----------SQSRFKADSQPPSSSRSAF 191
Query: 121 PPQASSTLRSPSQENSRQQPLKKTSRVQSPSHLSSKPTGQSTSQHIASPAAIEDQT-TNG 180
PQ S EN + TS+ S H S+K + ++ Q DQT NG
Sbjct: 192 SPQT-------SLENQPETKEDLTSKNNSNPH-SNKNSSKTPIQ--------SDQTIENG 251
Query: 181 IISHPANQLPQAKSKSKEKDRDSEEKEIMEGISKAFQKLNIKCSGEENPKSFVSLIGDNK 240
+ + P +Q Q+K + ++DS+++E MEG++KAFQKLNIK S +ENPKSF +LIG+NK
Sbjct: 252 LETSPESQ-EQSKETKENLEKDSKQEESMEGLAKAFQKLNIKYSDKENPKSFTTLIGNNK 311
Query: 241 GASMHL------------------------------VSGNFKHKTPKDSRSEEDPPLRLC 300
GASM L + GNFKHKTP+DSR+EE+P +L
Sbjct: 312 GASMLLHSGEPKADSSIHIHRQYKNNPGQIAKSFTEMEGNFKHKTPQDSRTEENPAQKLY 371
Query: 301 INNNLQGINNSILSNSSITERNPGVKLKFFREPTKSEDKSQPLHARKAKYTAKPAERLTY 360
IN N+QG+NNSI+ +SS TE +PG+ LKF REPTKS+D+ Q AKPAER+T+
Sbjct: 372 ININVQGMNNSIMLDSSFTENDPGINLKFPREPTKSKDELQ---------VAKPAERVTH 431
Query: 361 EPTVRRRCLRGLFMESSDSELDNPEKPRRHGCRYS-NCKGKEVEIL 374
EP VRRRCLRGL MESSDSE+DNPEKPRRHGCRYS CKGK+VE L
Sbjct: 432 EPAVRRRCLRGLLMESSDSEVDNPEKPRRHGCRYSRGCKGKKVETL 434
BLAST of Sgr028519.1 vs. TAIR 10
Match:
AT1G75260.1 (oxidoreductases, acting on NADH or NADPH )
HSP 1 Score: 102.4 bits (254), Expect = 7.8e-22
Identity = 97/309 (31.39%), Postives = 141/309 (45.63%), Query Frame = 0
Query: 95 LHSKLTSQLRLKADSPPSSSSQSAFPPQASSTLRSPSQENSRQQPLKK-----TSRVQSP 154
LH +L S ++ + +L++ +E++ + + + + P
Sbjct: 210 LHDDGVQKLEADQGQQKSKETEKLALQETKRSLQAVGREDATRSKTTRHMAAASETTRGP 269
Query: 155 SHLSSKPTGQSTSQHIASPAAIEDQTTNG-IISHPANQLPQAKSKSKEKDRDSEEKEIME 214
L K T T P Q T G + S+ N + S R +E +I +
Sbjct: 270 RDLPEKKT--ETQNRTEIPTDDNHQKTKGALTSNLGNPRVTNREGSSSMSRKIKE-DIRD 329
Query: 215 GISKAFQKLNIKCSGEENPKSFVSLIGDNKGASMHLVSGNFKH----------------- 274
GISK K +G++ S +L G+NKGA+M + S K
Sbjct: 330 GISKLTWG---KSNGDDKSVSVYTLTGENKGATMGIGSEKDKKDGEVHIRRGYRSNPDES 389
Query: 275 --------KTPKDSRSEEDPPLRLCINNNLQGINNSILSNSSITERNPGVKLKFFREPTK 334
+ PKD +EE+ IN N QGINNSI+ SS++E +PGV + F E K
Sbjct: 390 SNTTATETENPKDDEAEEEASFTAYINGNTQGINNSIVVESSVSENDPGVHMSFKFEILK 449
Query: 335 SEDKSQPLHARKAK-YTAKPAERLTYEPTVRRRCLRGLFMESSDSELDNPEKPRRHGCRY 372
E P + + K T ++L EP VRRRCLRGL ESS+SE DNP KPRRHGCR+
Sbjct: 450 KEVIYPPENVEEKKPETVTVTKKLKNEPRVRRRCLRGLLAESSESEPDNPLKPRRHGCRF 509
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022144159.1 | 3.2e-102 | 52.38 | cell wall protein RBR3 [Momordica charantia] | [more] |
XP_023002262.1 | 2.3e-92 | 45.67 | cell wall protein RBR3-like [Cucurbita maxima] | [more] |
KAG6585587.1 | 3.0e-92 | 46.13 | hypothetical protein SDJN03_18320, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022951875.1 | 6.7e-92 | 45.67 | cell wall protein RBR3-like [Cucurbita moschata] | [more] |
KAG7020502.1 | 2.8e-90 | 45.59 | hypothetical protein SDJN02_17187, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CRH0 | 1.6e-102 | 52.38 | cell wall protein RBR3 OS=Momordica charantia OX=3673 GN=LOC111013918 PE=4 SV=1 | [more] |
A0A6J1KJ10 | 1.1e-92 | 45.67 | cell wall protein RBR3-like OS=Cucurbita maxima OX=3661 GN=LOC111496164 PE=4 SV=... | [more] |
A0A6J1GK50 | 3.2e-92 | 45.67 | cell wall protein RBR3-like OS=Cucurbita moschata OX=3662 GN=LOC111454611 PE=4 S... | [more] |
A0A6J1HD15 | 9.8e-73 | 50.25 | pollen-specific leucine-rich repeat extensin-like protein 2 OS=Cucurbita moschat... | [more] |
A0A6J1K9X9 | 1.7e-72 | 50.74 | probable serine/threonine-protein kinase samkC OS=Cucurbita maxima OX=3661 GN=LO... | [more] |
Match Name | E-value | Identity | Description | |
AT1G75260.1 | 7.8e-22 | 31.39 | oxidoreductases, acting on NADH or NADPH | [more] |