Sgr028501.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr028501.1
Type	mRNA
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Unknown protein
Location	tig00153204: 1693250 .. 1694469 (-)
Sequence length	285
RNA-Seq Expression	Sgr028501.1
Synteny	Sgr028501.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGGAGGGTGGTGGGGAGCGGCGGAGAAAAGTGGGTGGCGGTGGTGGTGGCGGTGTTGCATGGGAAGGAAACAGAGAACAAAATCTTGGTTGCACAAGGCTGCGTCTTGGAAGTAACGTAAGACTGGGGATTGCGCTTTAAAGATTTTCGTACGCAAAAACATGCAGCTAACAGATTCTATCTTTTCTCTCTTTCTATGATTCTGCGTTTTTTTCTTGGGAGAGAGAGATTTTCCCAGAAGACAAACACAAAAGTGCGACTTGGAAATCCAAGAACTTAAAAAAAAAAAAAAAAAACCAGTGCCTCAGTTTCTCTGTCTGAAAATTTTTTTCCCACAGAAACACGAGAGGGGGGGCTGAGTGACTTCTTGTCGCTCTTTTATGTCTAGGATATAACGTGCAGGTTCTTGATTTATAAGACAAAACAATACTAGGGTTTTTTTTTCCATTTCTTTTTAATTTTTATGTTTAAACATCTCTAAAATTTTTTTTCTTTTCAACTAATTTCAAATATCATATTTTAATATTTAAATTTTGCATAAAAATTATTGTAATTCTCACCATCAATTTTTCAAAATTTTATATTTTTGTATGTAAACTACATATAATAAATAGGTTGTGTGTCGAATTGTATAATAAAATTGAATTTTTTGTTAAACAAAAAAGACTGATTTTTTTATGAAAATTGTAATAAAACATTTGAAACTTTATGTTTTATAATAAAATATTAAAAATTTAATAATTAAAAATCAATATGAATATAGCTCAATTGATTAAGGTATTATATATTTGTCATAAACGTTATGTTTGAATCTCTACCTCTACATTGTTGAAGTAGAGATGTGCCTTAACTATGTTCACGACAGAAATTCTTACTTATTTTTCTAATATAATTCATCTTTAATGGATAAAAAAAATAATAAAATTCACTTATTTATTAAATAAAACACAAAAGACATAAATTGGTCAATACAAATCGATTACTTCTAAAATGGAACGAGCTCTTATTTACCAATAATTAATGCAAATTTTGGTCTAAGATAAATTCAAAAGTTGATGAGTTTAGTTGAGAGCGAGGGCGCGACACGTGGCTTTTCACGTGCCAGGATGAGGGAGACACGTGTGAGGTCGAGGAAACTGTATGAAAAGGGCGCTGCTCCGGGCCCCACTCCTGGATACGGAGGATCTGCGTTGGGACACGAGCAGGGGGAGTGA

mRNA sequence

ATGGAGGAGGAGGGTGGTGGGGAGCGGCGGAGAAAAGTGGGTGGCGGTGGTGGTGGCGGTGTTGCATGGGAAGGAAACAGAGAACAAAATCTTGGTTGCACAAGGCTGCGTCTTGGAAGTAACTTGATGAGTTTAGTTGAGAGCGAGGGCGCGACACGTGGCTTTTCACGTGCCAGGATGAGGGAGACACGTGTGAGGTCGAGGAAACTGTATGAAAAGGGCGCTGCTCCGGGCCCCACTCCTGGATACGGAGGATCTGCGTTGGGACACGAGCAGGGGGAGTGA

Coding sequence (CDS)

ATGGAGGAGGAGGGTGGTGGGGAGCGGCGGAGAAAAGTGGGTGGCGGTGGTGGTGGCGGTGTTGCATGGGAAGGAAACAGAGAACAAAATCTTGGTTGCACAAGGCTGCGTCTTGGAAGTAACTTGATGAGTTTAGTTGAGAGCGAGGGCGCGACACGTGGCTTTTCACGTGCCAGGATGAGGGAGACACGTGTGAGGTCGAGGAAACTGTATGAAAAGGGCGCTGCTCCGGGCCCCACTCCTGGATACGGAGGATCTGCGTTGGGACACGAGCAGGGGGAGTGA

Protein sequence

MEEEGGGERRRKVGGGGGGGVAWEGNREQNLGCTRLRLGSNLMSLVESEGATRGFSRARMRETRVRSRKLYEKGAAPGPTPGYGGSALGHEQGE

Homology

The following BLAST results are available for this feature:

BLAST of Sgr028501.1 vs.


Match Name	E-value	Identity	Description

BLAST of Sgr028501.1 vs.


Match Name	E-value	Identity	Description

BLAST of Sgr028501.1 vs.


Match Name	E-value	Identity	Description

BLAST of Sgr028501.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..71

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sgr028501	Sgr028501	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sgr028501.1.exon2	Sgr028501.1.exon2	exon
Sgr028501.1.exon1	Sgr028501.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Sgr028501.1	cds.Sgr028501.1_2	CDS
cds.Sgr028501.1	cds.Sgr028501.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sgr028501.1	Sgr028501.1-protein	polypeptide