Sgr028385.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr028385.1
Type	mRNA
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Unknown protein
Location	tig00153145: 1391455 .. 1395567 (+)
Sequence length	930
RNA-Seq Expression	Sgr028385.1
Synteny	Sgr028385.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGAGCATCTACAACCTCATAATCTGTCGATGTCACCAGTGGCAGATAGACAAGTAACAGAGCTCTCTAGAAGCAATTTGACTTGCTTGAACTTGGACTCGTATACGTAAAAGTGTCTAGCCAACTGATGTTCATATATTAATTTTCTGGTAATATTCTATTTGTCAAGATCAATTCTAAATTAATGTTAGACCAACTGATATCCATCTATATAACTTTCTCAACTAAACATTCAGAACTTTTAGCTAACAGAATTCTCTCTTAGAAGTTAAATAAAGAAAAAAAATACTTAATAATGTTTAGGCTAAATATATGTTTTAGTATTTTTATAATTTAGTCTCTATTATTTAAAAAGTTTCAATTTAGTTCTTTATGTTTTAAAAATTTTCAATTATACCTTTCACATCGGTGAATATTAAAATTGGTTGATGACAAGCTTATATTATATGATATTTATTGAATTGGCCAAAATTTGACAATCTAAAAGAAGAAAAAATCGAAATTTCTACCAATTTCTTAAAAATTTGAAAGAGGAATTAGAAAGTTTCCTCTTTTAGGTAGTCTACTTTCTTCTTTAAATTTATGTCAACTCACTACGTATCATGTCATGTAAGTTTACTATTAGCCAATTTTAATATTCACCAACATGAAGAATATAACTGAAAAATGTTAAAACATAAAGGACTGAATTTAAATTTTTAAACAATAGAGACTAAATTAAAAAAATACTAAAATTAGAAACTAAAACATATATTTAGCATAATGTCTAGGATATTTGAAATAATAAGTTGCAAGTAAATTTATTCTAGTTTCTTAGATGCCGACTAATCCTAATGTTGGCTCAAATACCCCACAATAATAGAAGTCTATATATTCACTATTTTTTATTTCTTATTTTGACCCATTAAATTAAATAGTCATAAAGTAATTATTAAGAACATGTTGCCCATGTGGATTAGAACTAAAATTTTAACAATAACTTATTCAGCCTACATATTAATCTTGAAATAATTGTATAAAAACATGTTGCCCACTCCTTATGATTAGGATTCAAGTGTTTTAGATGAATTGGGCTTTTGTTAAGCTCATTAGCGTGGCTTTACTCTCACTTCCTCCAAAGCACCGCACTTTTTAACTCCAAGAGGAGTTTGATACCTCATCCTTGATTTAATCCTATCCAAATTTTGAACAAGGTTCTATTTTCCTTTTTATCAAGTAATTTCTTTTTTTTTTTTTAGTTCAATAATTGTGAGGTAGGGGATTGAACCATCGACCTTAAGGATGGTAATAGATACCTTATTCATTAACCTAGGTTCGAATCGACCATTTTTATCAAGTGATTATGTCTAGGCATATGCCAGAGTTGGGACACTCTTATTTTTTATCAAGTAATTTTCAATAACCAATTCAAATATTTTCAACCACGATCAAATTGTAGTATTTTGATAGACTTACCAAATCTCTTTTTCATTCTAGCCATGAAGTTCTTAACAAGTAAATCAATACTATGTTGGTGATTCAAACCTCGTAGATAGTATAACACTATCTTTACTTGTAAGATTGACTATGAGACGAAACAACATATTTTTCTTCCACTAGCCTTGGCCGAAATTAAGAGGAGATGAAGAGAGAATTTTAGTTATAAATACTTAAAATCTTCTGAAATGAGCATTGAAGGCTTTAACCCCAAGAACCATCCTTCTTTTATAAACCTTTGAAAAGCTTTTGGTAAAGTAGAAATCAAATTCCCACCAGAATAAAATAATAATAATAAGTAAATAAATAAAAATAAAAAAACTTCCCTCATTAAACTCTTATTTTGAAAAATCATTTCCCATAAAATTCCTTAAGTTGGCTGGCCATGAAAAGAGATAGGAAAGATAAATTTTAGTTGGTCATGGCTTAATTTCTTTGCCTATCAAGGACTCTTTCATGATCCACATCACACATCTAAGCCCATTTTTTACTTGACCCACTTTCCTCTCTAATTGACTCATCCAAACCTTATTCAATTTTGGATTTATTTAATTCACCTTTTCAGATTAAATTTTCTAAGTTTTAAAATGTAATTTTGTGGGCTAGCAGTGCATCTAATTAGCTTATTAGATTATGAACTCCCTCAGCCAATTGTTCATAGGAGAAGAAAATTTTTCTCCTTTCATATTTTTAAGTACTCACAACTTTGTTTAAAAGAAAGTGCTCACACGTTTGAGGAAGAAACCTAAAAAAAGAAAATATATTTAGGCCTATAATGGAGGAAATCTCGTAATTTTGACGAAGCCTAAAATGCCAAAAAAGGGAGAAACTTTTTAGATCACAAAATGTAAAAACTAGAACAAATGCCAATCCATTTTCAGGGAAAATGCATTTGGAGTGGAGAAGAAAGGCCATGATGAAGTTAAGAGCTGCAAAGTCCACTTATATAGGAAATAAACAATAATGGGAAAAAATGCAACCAATCAAACAAAATAGTGGCGGCAGAATACGAAATGGGAGAAAAAGACCGAACAGAAGAGAGAAAAAAAAAAAAGCCAAAACTTTAAAGAGTGGTTGGTTGAAAAGTGCGAAGTCCTTGTCCCACACATTGGTGGTAGTCTAGTGCTTCTTAGTTATTGGTTGAAAAGTGCAAATTCCTTTTCCCACACATTGGTGGTAGTGCCTCTTAAGTCTTATCAGCCATAAAACACCAAAAACTAATAACTCCAATTTTATGCACCAATCATCAATCATTCACAAAGGAAAAGAAATAGTTCATTCATCGACCTCATCTTCTCTTTTCTACTTAATTATTCATGAACAAACTGCAGAACGTTTCAAGGGCTAGAGAACTTTTTCTATCCATGAAACATTATTCGGCATGGGTGGCTATCATGCCATAGCTACTTAAGTATCTTTTCACAGTTGTTAGGTGCACGGTCTATTGAAAGAGTGACCACATGCATTTAATATTTTCATAATTGATTCAGCATACCTAGTAATTTCTTGTGATCTAGAGTCGAGCACACATTACAGAGCAAACCAACCAAGAAAACTTGACTGACCTAACACAAGGTTGGCATTTTAGTAAAACTTACCCATAATAGAACTAAAGATCCAAGGTTTTAATAAAGAAAACAAACAGCTCTTCTAGAGTACCAGAATCAGGATAGAGAAAGGGCTAAAAGTCCCCCAAAAGCAAACACTTTCTCTCTGCTCCCACATATTACAGCTTGTTCCTATACCAGAAAACGCCTTTATTCTTATCACCTTCATCAGGCTCAACGTAAACGCACTCCTTTGCCTCCCTCCACATGGCCTTGAAAATTGGAGTCCCATCAAAGTGATAATACTGACCCAAGATTGGCTTTATGGCTTTGGTTGCCTCCATGGCGTGGTAATGTGGCATGGTGGAGACCAAATGGTGGGCCACGTGAGTATCTGTGATGTTGTGGAAGACCTTGTTCAAGAAGCCATAGTCTCTGTCCACCGTCGCCAGAGCGCCCCTCAGCCAATCCCACTCGGAGGAATCGTAATGTGGCAATGCGAGGTGAGTGTGCTGCAAGAATGTGATCAGGACCAGAAACCCGTTCACCACCAGCAGTGGCACCCCATACACACACAACACCCAGGCAAGGCCTTTGGCCAGGACAAGGCGGTAGAGCCCGTACGTGACGGCCAGCAACCCAGCGTCGGAAATGAATATCTGCAACCGCTCTCGGTCGGAGTAGATAGGCCCGTATGGGTCGTAGTGGCATGCGAAACGGTCGTAGGGCCTGCCGGAGACGTTGAAGGCCAAGTACAGAGGCCAGCCTAGGACAAGTTGGACGGTGAGGGTGAAGACTCGGCCGGGTGGGTTGTTAAGGTACTTGGAGTACCATTTGATGCCGGATCTCTGTTTAGGGACAAAGACTTCATCTCGCTCAAGAGAACCGGTGTTGGAATGGTGTCTGCGGTGGCTGTACTTCCAAGAGAAGTAAGGGACCATTAGGGAAGAGTGGAGGATAAGGCCAACGGTGTCATCGAGCCACTGGTAATCACTGAAGGCGTGGTGGCCGCACTCGTGGGCAATGACCCATACGCCGGTTAGGACGCAGCCTTGGGCGGCCCAGTATAAAGCCCAGGCTGGATAG

mRNA sequence

ATGGGAGAGCATCTACAACCTCATAATCTGTCGATGTCACCAGTGGCAGATAGACAAGTAACAGAGCTCTCTAGAAGCAATTTGACTTGCTTGAACTTGGACTCGTATACGGAAAATGCATTTGGAGTGGAGAAGAAAGGCCATGATGAAGTTAAGAGCTGCAAACTTGTTCCTATACCAGAAAACGCCTTTATTCTTATCACCTTCATCAGGCTCAACGTAAACGCACTCCTTTGCCTCCCTCCACATGGCCTTGAAAATTGGAGTCCCATCAAAGTGATAATACTGACCCAAGATTGGCTTTATGGCTTTGGTTGCCTCCATGGCGTGGTAATGTGGCATGGTGGAGACCAAATGGTGGGCCACGTGAGTATCTGTGATGTTGTGGAAGACCTTGTTCAAGAAGCCATAGTCTCTGTCCACCGTCGCCAGAGCGCCCCTCAGCCAATCCCACTCGGAGGAATCGTAATGTGGCAATGCGAGGTGAGTGTGCTGCAAGAATGTGATCAGGACCAGAAACCCGTTCACCACCAGCAGTGGCACCCCATACACACACAACACCCAGGCAAGGCCTTTGGCCAGGACAAGGCGGTAGAGCCCGTACGTGACGGCCAGCAACCCAGCGTCGGAAATGAATATCTGCAACCGCTCTCGGTCGGAGTAGATAGGCCCGTATGGGTCGTAGTGGCATGCGAAACGGTCGTAGGGCCTGCCGGAGACGTTGAAGGCCAAGTACTTGGAGTACCATTTGATGCCGGATCTCTGTTTAGGGACAAAGACTTCATCTCGCTCAAGAGAACCGGTGTTGGAATGGTGTCTGCGGTGGCTGTACTTCCAAGAGAAGCGTGGTGGCCGCACTCGTGGGCAATGACCCATACGCCGGTTAGGACGCAGCCTTGGGCGGCCCAGTATAAAGCCCAGGCTGGATAG

Coding sequence (CDS)

ATGGGAGAGCATCTACAACCTCATAATCTGTCGATGTCACCAGTGGCAGATAGACAAGTAACAGAGCTCTCTAGAAGCAATTTGACTTGCTTGAACTTGGACTCGTATACGGAAAATGCATTTGGAGTGGAGAAGAAAGGCCATGATGAAGTTAAGAGCTGCAAACTTGTTCCTATACCAGAAAACGCCTTTATTCTTATCACCTTCATCAGGCTCAACGTAAACGCACTCCTTTGCCTCCCTCCACATGGCCTTGAAAATTGGAGTCCCATCAAAGTGATAATACTGACCCAAGATTGGCTTTATGGCTTTGGTTGCCTCCATGGCGTGGTAATGTGGCATGGTGGAGACCAAATGGTGGGCCACGTGAGTATCTGTGATGTTGTGGAAGACCTTGTTCAAGAAGCCATAGTCTCTGTCCACCGTCGCCAGAGCGCCCCTCAGCCAATCCCACTCGGAGGAATCGTAATGTGGCAATGCGAGGTGAGTGTGCTGCAAGAATGTGATCAGGACCAGAAACCCGTTCACCACCAGCAGTGGCACCCCATACACACACAACACCCAGGCAAGGCCTTTGGCCAGGACAAGGCGGTAGAGCCCGTACGTGACGGCCAGCAACCCAGCGTCGGAAATGAATATCTGCAACCGCTCTCGGTCGGAGTAGATAGGCCCGTATGGGTCGTAGTGGCATGCGAAACGGTCGTAGGGCCTGCCGGAGACGTTGAAGGCCAAGTACTTGGAGTACCATTTGATGCCGGATCTCTGTTTAGGGACAAAGACTTCATCTCGCTCAAGAGAACCGGTGTTGGAATGGTGTCTGCGGTGGCTGTACTTCCAAGAGAAGCGTGGTGGCCGCACTCGTGGGCAATGACCCATACGCCGGTTAGGACGCAGCCTTGGGCGGCCCAGTATAAAGCCCAGGCTGGATAG

Protein sequence

MGEHLQPHNLSMSPVADRQVTELSRSNLTCLNLDSYTENAFGVEKKGHDEVKSCKLVPIPENAFILITFIRLNVNALLCLPPHGLENWSPIKVIILTQDWLYGFGCLHGVVMWHGGDQMVGHVSICDVVEDLVQEAIVSVHRRQSAPQPIPLGGIVMWQCEVSVLQECDQDQKPVHHQQWHPIHTQHPGKAFGQDKAVEPVRDGQQPSVGNEYLQPLSVGVDRPVWVVVACETVVGPAGDVEGQVLGVPFDAGSLFRDKDFISLKRTGVGMVSAVAVLPREAWWPHSWAMTHTPVRTQPWAAQYKAQAG

Homology

[Close]

BLAST of Sgr028385.1 vs. NCBI nr
Match: ACL52983.1 (unknown [Zea mays] >ACL53151.1 unknown [Zea mays] >ACL53170.1 unknown [Zea mays] >ACL53198.1 unknown [Zea mays] >ACN35830.1 unknown [Zea mays])

HSP 1 Score: 134.0 bits (336), Expect = 2.2e-27
Identity = 93/255 (36.47%), Postives = 134/255 (52.55%), Query Frame = 0


Query: 50  EVKSCKLVPIPENAFILITFIRLNVNALLCLPPHGLENWSPIKVIILTQDWLYGFGCLHG 109
           E +  +L+ +PE+A   +  + L+V+AL  L P  L N   ++V+++ +D     G LHG
Sbjct: 9   ERRRLELLVVPEDA---LAVLGLDVDALPGLAPGRLGNRGRVEVVVVPEDGPDRLGGLHG 68

Query: 110 VVMWHGGDQMVGHVSICDVVEDLVQEAIVSVHRRQSAPQPIPLGGIVMWQCEVSVLQECD 169
           VV+ HGG+++V  V + DVVE  V++A+V+VH  Q A QP+PL  +V+ +  V VLQ  D
Sbjct: 69  VVVRHGGEEVVRDVRVRDVVEHAVEDAVVAVHGGQRAAQPVPLARVVVGERRVGVLQVGD 128

Query: 170 QDQKPVHHQQWHPIHTQHPGKAFGQDKAVEPVRDGQQPSVGNEYLQPLSVGVDRPVWVVV 229
           + Q  VH QQ H +H  HP     + + V+P R G    V +E L  L V VD  V V V
Sbjct: 129 EHQPRVHDQQRHGVHAHHPPDPERRRQLVQPERHGHDAGVRDEDLGALPVVVDGAVGVEV 188

Query: 230 ACETVVGPAGDV--------EGQ---------------VLGVPFDAGSLFRDKDFISLKR 282
           A E  V P   V        EG+               V GVP     L   +  ++L+ 
Sbjct: 189 AGEARVRPPRRVGRQVQRPPEGELHHDVHHPADRVVVHVRGVPRQRLLLLGHEHLVALQG 248

[Close]

BLAST of Sgr028385.1 vs. ExPASy TrEMBL
Match: B7ZYI4 (Uncharacterized protein OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.0e-27
Identity = 93/255 (36.47%), Postives = 134/255 (52.55%), Query Frame = 0


Query: 50  EVKSCKLVPIPENAFILITFIRLNVNALLCLPPHGLENWSPIKVIILTQDWLYGFGCLHG 109
           E +  +L+ +PE+A   +  + L+V+AL  L P  L N   ++V+++ +D     G LHG
Sbjct: 9   ERRRLELLVVPEDA---LAVLGLDVDALPGLAPGRLGNRGRVEVVVVPEDGPDRLGGLHG 68

Query: 110 VVMWHGGDQMVGHVSICDVVEDLVQEAIVSVHRRQSAPQPIPLGGIVMWQCEVSVLQECD 169
           VV+ HGG+++V  V + DVVE  V++A+V+VH  Q A QP+PL  +V+ +  V VLQ  D
Sbjct: 69  VVVRHGGEEVVRDVRVRDVVEHAVEDAVVAVHGGQRAAQPVPLARVVVGERRVGVLQVGD 128

Query: 170 QDQKPVHHQQWHPIHTQHPGKAFGQDKAVEPVRDGQQPSVGNEYLQPLSVGVDRPVWVVV 229
           + Q  VH QQ H +H  HP     + + V+P R G    V +E L  L V VD  V V V
Sbjct: 129 EHQPRVHDQQRHGVHAHHPPDPERRRQLVQPERHGHDAGVRDEDLGALPVVVDGAVGVEV 188

Query: 230 ACETVVGPAGDV--------EGQ---------------VLGVPFDAGSLFRDKDFISLKR 282
           A E  V P   V        EG+               V GVP     L   +  ++L+ 
Sbjct: 189 AGEARVRPPRRVGRQVQRPPEGELHHDVHHPADRVVVHVRGVPRQRLLLLGHEHLVALQG 248

[Close]

BLAST of Sgr028385.1 vs. ExPASy TrEMBL
Match: A0A251V4E0 (Uncharacterized protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr04g0127931 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 6.8e-11
Identity = 38/85 (44.71%), Postives = 55/85 (64.71%), Query Frame = 0


Query: 59  IPENAFILITFIRLNVNALLCLPPHGLENWSPIKVIILTQDWLYGFGCLHGVVMWHGGDQ 118
           +P  AF+   FI  +V+A L L PH LEN  PI +I L QDWL    CL  ++MW+ GDQ
Sbjct: 2   VPICAFVFAIFIWFDVDAFLGLSPHRLENRGPIDLIKLAQDWLDCVSCLLCMIMWNIGDQ 61

Query: 119 MVGHVSICDVVEDLVQEAIVSVHRR 144
           M+ HVS+ D++E+ +QE  + ++ R
Sbjct: 62  MMQHVSVGDIMENPIQEPEIPINCR 86

[Close]

BLAST of Sgr028385.1 vs. ExPASy TrEMBL
Match: A0A0E0HZH0 (Uncharacterized protein OS=Oryza nivara OX=4536 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.9e-06
Identity = 34/92 (36.96%), Postives = 60/92 (65.22%), Query Frame = 0


Query: 51  VKSCKLVPIPENAFILITFIRLNVNALLCLPPHGLENWSPIKVIILTQDWLYGFGCLHGV 110
           ++  +LV +PE+A ++   + L+V+ALL L P+ L +   I++++L +D     G LH V
Sbjct: 73  LQELELVAVPEDALVV---LGLDVDALLSLAPYRLNDGCGIELVVLAKDGADRLGRLHRV 132

Query: 111 VMWHGGDQ-MVGHVSICDVVEDLVQEAIVSVH 142
           V+  G ++ +V  V ICD+VE  ++EA+V+VH
Sbjct: 133 VVRDGREEVVVRDVRICDIVEHSIEEAVVAVH 161

The following BLAST results are available for this feature:

BLAST of Sgr028385.1 vs. NCBI nr


Match Name	E-value	Identity	Description
ACL52983.1	2.2e-27	36.47	unknown [Zea mays] >ACL53151.1 unknown [Zea mays] >ACL53170.1 unknown [Zea mays]...	[more]

BLAST of Sgr028385.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr028385.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
B7ZYI4	1.0e-27	36.47	Uncharacterized protein OS=Zea mays OX=4577 PE=2 SV=1	[more]
A0A251V4E0	6.8e-11	44.71	Uncharacterized protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr04g0127931 PE...	[more]
A0A0E0HZH0	3.9e-06	36.96	Uncharacterized protein OS=Oryza nivara OX=4536 PE=4 SV=1	[more]

BLAST of Sgr028385.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sgr028385	Sgr028385	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sgr028385.1.exon1	Sgr028385.1.exon1	exon
Sgr028385.1.exon2	Sgr028385.1.exon2	exon
Sgr028385.1.exon3	Sgr028385.1.exon3	exon
Sgr028385.1.exon4	Sgr028385.1.exon4	exon
Sgr028385.1.exon5	Sgr028385.1.exon5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Sgr028385.1	cds.Sgr028385.1	CDS
cds.Sgr028385.1	cds.Sgr028385.1_2	CDS
cds.Sgr028385.1	cds.Sgr028385.1_3	CDS
cds.Sgr028385.1	cds.Sgr028385.1_4	CDS
cds.Sgr028385.1	cds.Sgr028385.1_5	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sgr028385.1	Sgr028385.1-protein	polypeptide