Sgr027029.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr027029.1
Type	mRNA
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Clavata3/ESR (CLE) gene family member
Location	tig00153047: 3314278 .. 3314565 (-)
Sequence length	288
RNA-Seq Expression	Sgr027029.1
Synteny	Sgr027029.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGTAGCAAAGTCCAGCATATTGGTGCTTTGGCTTTCAGTTTTAGTCTGCATTGGCTCCATAGCCGGAGCTCGGAAGATGATCTTTCCGGCCAACGGGGATGGCAGAGACAACAACAGCTTGAGGACGACAATGGAAGAAGAGGCACTGAGCACGTGCAAGTCAAAGAACCTCCATTGTTGCGAGTGCTTCTTCTCCAGCTCTGAGAAGATGATCAACAATGGCAGCAGTTCAGAGGAGAAACGGGTCGTTCCCACCGGCCCCAACCCACTTCATAACAAGTAG

mRNA sequence

ATGAGAGTAGCAAAGTCCAGCATATTGGTGCTTTGGCTTTCAGTTTTAGTCTGCATTGGCTCCATAGCCGGAGCTCGGAAGATGATCTTTCCGGCCAACGGGGATGGCAGAGACAACAACAGCTTGAGGACGACAATGGAAGAAGAGGCACTGAGCACGTGCAAGTCAAAGAACCTCCATTGTTGCGAGTGCTTCTTCTCCAGCTCTGAGAAGATGATCAACAATGGCAGCAGTTCAGAGGAGAAACGGGTCGTTCCCACCGGCCCCAACCCACTTCATAACAAGTAG

Coding sequence (CDS)

ATGAGAGTAGCAAAGTCCAGCATATTGGTGCTTTGGCTTTCAGTTTTAGTCTGCATTGGCTCCATAGCCGGAGCTCGGAAGATGATCTTTCCGGCCAACGGGGATGGCAGAGACAACAACAGCTTGAGGACGACAATGGAAGAAGAGGCACTGAGCACGTGCAAGTCAAAGAACCTCCATTGTTGCGAGTGCTTCTTCTCCAGCTCTGAGAAGATGATCAACAATGGCAGCAGTTCAGAGGAGAAACGGGTCGTTCCCACCGGCCCCAACCCACTTCATAACAAGTAG

Protein sequence

MRVAKSSILVLWLSVLVCIGSIAGARKMIFPANGDGRDNNSLRTTMEEEALSTCKSKNLHCCECFFSSSEKMINNGSSSEEKRVVPTGPNPLHNK

Homology

[Close]

BLAST of Sgr027029.1 vs. NCBI nr
Match: KAG6587715.1 (hypothetical protein SDJN03_16280, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 129.4 bits (324), Expect = 1.6e-26
Identity = 71/96 (73.96%), Postives = 76/96 (79.17%), Query Frame = 0


Query: 1  MRVAKSSILVLWLSVLVCIGSIAGARKMIFPANGDGRDNNSLRTTMEEEALSTCKSKNLH 60
          MR+A+SSILVL LSV VCIGS+ GARKM+F A    RDNNSL   ME      CKSK L+
Sbjct: 1  MRLAQSSILVLSLSVFVCIGSVVGARKMLFLAQDSTRDNNSLTIAMESS--RRCKSKKLY 60

Query: 61 CCECFFSSSEKMINNG-SSSEEKRVVPTGPNPLHNK 96
          CCECFFSSSEKMINN  SSSEEKRVVPTGPNPLHNK
Sbjct: 61 CCECFFSSSEKMINNATSSSEEKRVVPTGPNPLHNK 94

[Close]

BLAST of Sgr027029.1 vs. NCBI nr
Match: KGN65507.1 (hypothetical protein Csa_019832 [Cucumis sativus])

HSP 1 Score: 108.2 bits (269), Expect = 3.9e-20
Identity = 64/106 (60.38%), Postives = 78/106 (73.58%), Query Frame = 0


Query: 1   MRVAKSSILVLWLSVL-VCIGSIAGARKMIFPANGDGRDN-NSLRTTMEEEALSTCK-SK 60
           M ++KSSIL+ WLSVL VC+ S+AGARK +F  +   RDN NSL TT+ E  ++ CK SK
Sbjct: 5   MGLSKSSILLFWLSVLVVCVTSVAGARKTLFLDHNGVRDNKNSLTTTLAETTINRCKYSK 64

Query: 61  N-----LHCCECFFSSSEKMI----NNGSSSEEKRVVPTGPNPLHN 95
           N     LHCCECFF SS+KM+    NNG++ EEKRVVPTGPNPLHN
Sbjct: 65  NNDVNDLHCCECFFLSSKKMMMIDNNNGTNFEEKRVVPTGPNPLHN 110

[Close]

BLAST of Sgr027029.1 vs. NCBI nr
Match: KAA0058189.1 (Clavata3/ESR (CLE) protein [Cucumis melo var. makuwa] >TYK28553.1 Clavata3/ESR (CLE) gene family member [Cucumis melo var. makuwa])

HSP 1 Score: 106.7 bits (265), Expect = 1.1e-19
Identity = 64/106 (60.38%), Postives = 77/106 (72.64%), Query Frame = 0


Query: 1   MRVAKSSILVLWLSVL-VCIGSIAGARKMIFPANGDGRDN-NSLRTTMEEEALSTCK-SK 60
           M ++KSSILV WLSVL VC+ S+AGARK +F  +   RDN NSL TT  E  ++ CK SK
Sbjct: 5   MGLSKSSILVFWLSVLVVCVTSVAGARKPLFLGHNGVRDNKNSLTTTPGETTINRCKYSK 64

Query: 61  N----LHCCECFFSSSEKMI-----NNGSSSEEKRVVPTGPNPLHN 95
           N    LHCCECFF SS+KM+     NNG++ E+KRVVPTGPNPLHN
Sbjct: 65  NNANDLHCCECFFLSSKKMMMMINNNNGTNFEDKRVVPTGPNPLHN 110

[Close]

BLAST of Sgr027029.1 vs. NCBI nr
Match: XP_023003872.1 (putative receptor-like protein kinase At4g00960 [Cucurbita maxima])

HSP 1 Score: 94.0 bits (232), Expect = 7.6e-16
Identity = 54/81 (66.67%), Postives = 59/81 (72.84%), Query Frame = 0


Query: 5   KSSILVLWLSVLVCIGSIAGARKMIFPANGDGRDNNSLRTTMEEEALSTCKSKNLHCCEC 64
           +SSILVL LSV VCIGS+ GARKM+F A    RDNNSL   ME      CKSK L+CC C
Sbjct: 113 RSSILVLSLSVFVCIGSVVGARKMLFLAQDSTRDNNSLTIAMENS--RRCKSKKLYCCGC 172

Query: 65  FFSSSEKMINNG-SSSEEKRV 85
           FFSSSEK INN  SSSEEKR+
Sbjct: 173 FFSSSEKTINNATSSSEEKRL 191

[Close]

BLAST of Sgr027029.1 vs. NCBI nr
Match: AES92208.1 (Clavata3/ESR (CLE) gene family member [Medicago truncatula])

HSP 1 Score: 61.2 bits (147), Expect = 5.5e-06
Identity = 37/90 (41.11%), Postives = 48/90 (53.33%), Query Frame = 0


Query: 8  ILVLWLSVLVCIGSIAGARKMIFPAN--GDGRDNNSLRTTMEEEALSTCKSKNLHCCECF 67
          ILV+ +    CIGS   ARK +F  N     +  NS    + ++ +  C  K  H   C+
Sbjct: 7  ILVICILFWACIGSTTVARKTVFVGNLFDGAKKKNSSSVAVLDDDVHKCNHKRKHLSSCY 66

Query: 68 FSSSEKMINNGSSSEEKRVVPTGPNPLHNK 96
                  NN SSSE+KRVVPTGPNPLHN+
Sbjct: 67 --------NNTSSSEDKRVVPTGPNPLHNR 88

[Close]

BLAST of Sgr027029.1 vs. ExPASy TrEMBL
Match: A0A0A0LXI1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G433060 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.9e-20
Identity = 64/106 (60.38%), Postives = 78/106 (73.58%), Query Frame = 0


Query: 1   MRVAKSSILVLWLSVL-VCIGSIAGARKMIFPANGDGRDN-NSLRTTMEEEALSTCK-SK 60
           M ++KSSIL+ WLSVL VC+ S+AGARK +F  +   RDN NSL TT+ E  ++ CK SK
Sbjct: 5   MGLSKSSILLFWLSVLVVCVTSVAGARKTLFLDHNGVRDNKNSLTTTLAETTINRCKYSK 64

Query: 61  N-----LHCCECFFSSSEKMI----NNGSSSEEKRVVPTGPNPLHN 95
           N     LHCCECFF SS+KM+    NNG++ EEKRVVPTGPNPLHN
Sbjct: 65  NNDVNDLHCCECFFLSSKKMMMIDNNNGTNFEEKRVVPTGPNPLHN 110

[Close]

BLAST of Sgr027029.1 vs. ExPASy TrEMBL
Match: A0A5A7UXE2 (Clavata3/ESR (CLE) gene family member OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002000 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 5.5e-20
Identity = 64/106 (60.38%), Postives = 77/106 (72.64%), Query Frame = 0


Query: 1   MRVAKSSILVLWLSVL-VCIGSIAGARKMIFPANGDGRDN-NSLRTTMEEEALSTCK-SK 60
           M ++KSSILV WLSVL VC+ S+AGARK +F  +   RDN NSL TT  E  ++ CK SK
Sbjct: 5   MGLSKSSILVFWLSVLVVCVTSVAGARKPLFLGHNGVRDNKNSLTTTPGETTINRCKYSK 64

Query: 61  N----LHCCECFFSSSEKMI-----NNGSSSEEKRVVPTGPNPLHN 95
           N    LHCCECFF SS+KM+     NNG++ E+KRVVPTGPNPLHN
Sbjct: 65  NNANDLHCCECFFLSSKKMMMMINNNNGTNFEDKRVVPTGPNPLHN 110

[Close]

BLAST of Sgr027029.1 vs. ExPASy TrEMBL
Match: A0A6J1KNU3 (putative receptor-like protein kinase At4g00960 OS=Cucurbita maxima OX=3661 GN=LOC111497330 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.7e-16
Identity = 54/81 (66.67%), Postives = 59/81 (72.84%), Query Frame = 0


Query: 5   KSSILVLWLSVLVCIGSIAGARKMIFPANGDGRDNNSLRTTMEEEALSTCKSKNLHCCEC 64
           +SSILVL LSV VCIGS+ GARKM+F A    RDNNSL   ME      CKSK L+CC C
Sbjct: 113 RSSILVLSLSVFVCIGSVVGARKMLFLAQDSTRDNNSLTIAMENS--RRCKSKKLYCCGC 172

Query: 65  FFSSSEKMINNG-SSSEEKRV 85
           FFSSSEK INN  SSSEEKR+
Sbjct: 173 FFSSSEKTINNATSSSEEKRL 191

[Close]

BLAST of Sgr027029.1 vs. ExPASy TrEMBL
Match: G7JT84 (Clavata3/ESR (CLE) gene family member OS=Medicago truncatula OX=3880 GN=MTR_4g126940 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.6e-06
Identity = 37/90 (41.11%), Postives = 48/90 (53.33%), Query Frame = 0


Query: 8  ILVLWLSVLVCIGSIAGARKMIFPAN--GDGRDNNSLRTTMEEEALSTCKSKNLHCCECF 67
          ILV+ +    CIGS   ARK +F  N     +  NS    + ++ +  C  K  H   C+
Sbjct: 7  ILVICILFWACIGSTTVARKTVFVGNLFDGAKKKNSSSVAVLDDDVHKCNHKRKHLSSCY 66

Query: 68 FSSSEKMINNGSSSEEKRVVPTGPNPLHNK 96
                  NN SSSE+KRVVPTGPNPLHN+
Sbjct: 67 --------NNTSSSEDKRVVPTGPNPLHNR 88

[Close]

BLAST of Sgr027029.1 vs. ExPASy TrEMBL
Match: A0A396IGH6 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr4g0071381 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.6e-06
Identity = 37/90 (41.11%), Postives = 48/90 (53.33%), Query Frame = 0


Query: 8  ILVLWLSVLVCIGSIAGARKMIFPAN--GDGRDNNSLRTTMEEEALSTCKSKNLHCCECF 67
          ILV+ +    CIGS   ARK +F  N     +  NS    + ++ +  C  K  H   C+
Sbjct: 7  ILVICILFWACIGSTTVARKTVFVGNLFDGAKKKNSSSVAVLDDDVHKCNHKRKHLSSCY 66

Query: 68 FSSSEKMINNGSSSEEKRVVPTGPNPLHNK 96
                  NN SSSE+KRVVPTGPNPLHN+
Sbjct: 67 --------NNTSSSEDKRVVPTGPNPLHNR 88

The following BLAST results are available for this feature:

BLAST of Sgr027029.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6587715.1	1.6e-26	73.96	hypothetical protein SDJN03_16280, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KGN65507.1	3.9e-20	60.38	hypothetical protein Csa_019832 [Cucumis sativus]	[more]
KAA0058189.1	1.1e-19	60.38	Clavata3/ESR (CLE) protein [Cucumis melo var. makuwa] >TYK28553.1 Clavata3/ESR (...	[more]
XP_023003872.1	7.6e-16	66.67	putative receptor-like protein kinase At4g00960 [Cucurbita maxima]	[more]
AES92208.1	5.5e-06	41.11	Clavata3/ESR (CLE) gene family member [Medicago truncatula]	[more]

BLAST of Sgr027029.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr027029.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXI1	1.9e-20	60.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G433060 PE=4 SV=1	[more]
A0A5A7UXE2	5.5e-20	60.38	Clavata3/ESR (CLE) gene family member OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1KNU3	3.7e-16	66.67	putative receptor-like protein kinase At4g00960 OS=Cucurbita maxima OX=3661 GN=L...	[more]
G7JT84	2.6e-06	41.11	Clavata3/ESR (CLE) gene family member OS=Medicago truncatula OX=3880 GN=MTR_4g12...	[more]
A0A396IGH6	2.6e-06	41.11	Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr4g0071381 ...	[more]

BLAST of Sgr027029.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..95

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sgr027029	Sgr027029	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sgr027029.1.exon1	Sgr027029.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Sgr027029.1	cds.Sgr027029.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sgr027029.1	Sgr027029.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity