Sgr025068.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview
NameSgr025068.1
TypemRNA
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionGlycine-rich cell wall structural protein 1
Locationtig00003412: 1091046 .. 1092068 (-)
Sequence length1023
RNA-Seq ExpressionSgr025068.1
SyntenySgr025068.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGCTCTCCAAAATGGTTTACTCTCGGTCTAATCGTCCTCTGCAGTGTGCTCCATTTGAGTGCTATCGCTCTTGGAGATGACAAGCTTGATAAGAATGGATTTGGGGACGATGATTGTTGGGGTAGGCGTTGTGGTGGCAGATTTGGAGGACGGGGACCGGGCTTCGGTAGGGGAGGGCCAGGACGTGAGGGAGGTCTTGGTGGTGGAGGTGGAGGTGGTTTTGGTGGCGGTGGCGGTCGTGGTGGAGGGTTTGGAGCTGGGGGTGGAGTAGGTGGTGGCGCTGGAGGTGGCGTTGGTGGAGGTGGTGGTTTTGGAGGCGGTGGAGGAGGTGGGTTGGGAGGTGGGTCTGGCCATGGTGGGGGATTTGGAGCCGGGGGTGGAGTTGGAGGAGGTGCTGGAGGAGGAGTGGGTGGTGGAGGTGGATTTGGCGGTGGAGGAGGAGGCGGCGTTGGCGGTGGGTCAGGTCATGGCGGAGGTTTTGGAGCTGGAGGAGGTGTAGGTGGTGGTGTTGGTGGAGGTGCAGGAGGAGGAGGTGGAGGGGGAGGCGGAGGCGGAGGAGGTGGCGGCGTTGGTGGTGGGTCAGGTCATGGTGGAGGTTTTGGAGCTGGAGGAGGTTTAGGGGGTGGTGTCGGCGGAGGTACTGGAGGTGGAGGTGGAGGAGGAGGAGGAGGAGGTGGTGGTGGTCTAGGTGGGGGTTCCGGTCATGGAGGTGGATTTGGAGCAGGTGGTGGCGTAGGAGGTGGAGCAGGTGGAGGAATTGGAGGTGGCGGAGGAGCCGGAGGAGGAGGAGGTGGTGGTATAGGTGGAGGGTCTGGGCATGGGAGTGGTTTTGGCGCAGGTGGAGGTATTGGAGGAGGTGCTGGAGGTGGCTTAGGAGGAGGTGGTGGTGCTGGAGGGGCGGCGGTGGGGCGGTGGAGGATTGGGATCGGAGTAGGGATTGGAATAGGAGTTGGTGCCGGAGCTGGTCATGGCGTCGGTGTCGGCTCTGGATCCGGTGGAGGAGGTGGTGGCCATTAA

mRNA sequence

ATGGGTGGCTCTCCAAAATGGTTTACTCTCGGTCTAATCGTCCTCTGCAGTGTGCTCCATTTGAGTGCTATCGCTCTTGGAGATGACAAGCTTGATAAGAATGGATTTGGGGACGATGATTGTTGGGGTAGGCGTTGTGGTGGCAGATTTGGAGGACGGGGACCGGGCTTCGGTAGGGGAGGGCCAGGACGTGAGGGAGGTCTTGGTGGTGGAGGTGGAGGTGGTTTTGGTGGCGGTGGCGGTCGTGGTGGAGGGTTTGGAGCTGGGGGTGGAGTAGGTGGTGGCGCTGGAGGTGGCGTTGGTGGAGGTGGTGGTTTTGGAGGCGGTGGAGGAGGTGGGTTGGGAGGTGGGTCTGGCCATGGTGGGGGATTTGGAGCCGGGGGTGGAGTTGGAGGAGGTGCTGGAGGAGGAGTGGGTGGTGGAGGTGGATTTGGCGGTGGAGGAGGAGGCGGCGTTGGCGGTGGGTCAGGTCATGGCGGAGGTTTTGGAGCTGGAGGAGGTGTAGGTGGTGGTGTTGGTGGAGGTGCAGGAGGAGGAGGTGGAGGGGGAGGCGGAGGCGGAGGAGGTGGCGGCGTTGGTGGTGGGTCAGGTCATGGTGGAGGTTTTGGAGCTGGAGGAGGTTTAGGGGGTGGTGTCGGCGGAGGTACTGGAGGTGGAGGTGGAGGAGGAGGAGGAGGAGGTGGTGGTGGTCTAGGTGGGGGTTCCGGTCATGGAGGTGGATTTGGAGCAGGTGGTGGCGTAGGAGGTGGAGCAGGTGGAGGAATTGGAGGTGGCGGAGGAGCCGGAGGAGGAGGAGGTGGTGGTATAGGTGGAGGGTCTGGGCATGGGAGTGGTTTTGGCGCAGGTGGAGGTATTGGAGGAGGTGCTGGAGGTGGCTTAGGAGGAGGTGGTGGTGCTGGAGGGGCGGCGGTGGGGCGGTGGAGGATTGGGATCGGAGTAGGGATTGGAATAGGAGTTGGTGCCGGAGCTGGTCATGGCGTCGGTGTCGGCTCTGGATCCGGTGGAGGAGGTGGTGGCCATTAA

Coding sequence (CDS)

ATGGGTGGCTCTCCAAAATGGTTTACTCTCGGTCTAATCGTCCTCTGCAGTGTGCTCCATTTGAGTGCTATCGCTCTTGGAGATGACAAGCTTGATAAGAATGGATTTGGGGACGATGATTGTTGGGGTAGGCGTTGTGGTGGCAGATTTGGAGGACGGGGACCGGGCTTCGGTAGGGGAGGGCCAGGACGTGAGGGAGGTCTTGGTGGTGGAGGTGGAGGTGGTTTTGGTGGCGGTGGCGGTCGTGGTGGAGGGTTTGGAGCTGGGGGTGGAGTAGGTGGTGGCGCTGGAGGTGGCGTTGGTGGAGGTGGTGGTTTTGGAGGCGGTGGAGGAGGTGGGTTGGGAGGTGGGTCTGGCCATGGTGGGGGATTTGGAGCCGGGGGTGGAGTTGGAGGAGGTGCTGGAGGAGGAGTGGGTGGTGGAGGTGGATTTGGCGGTGGAGGAGGAGGCGGCGTTGGCGGTGGGTCAGGTCATGGCGGAGGTTTTGGAGCTGGAGGAGGTGTAGGTGGTGGTGTTGGTGGAGGTGCAGGAGGAGGAGGTGGAGGGGGAGGCGGAGGCGGAGGAGGTGGCGGCGTTGGTGGTGGGTCAGGTCATGGTGGAGGTTTTGGAGCTGGAGGAGGTTTAGGGGGTGGTGTCGGCGGAGGTACTGGAGGTGGAGGTGGAGGAGGAGGAGGAGGAGGTGGTGGTGGTCTAGGTGGGGGTTCCGGTCATGGAGGTGGATTTGGAGCAGGTGGTGGCGTAGGAGGTGGAGCAGGTGGAGGAATTGGAGGTGGCGGAGGAGCCGGAGGAGGAGGAGGTGGTGGTATAGGTGGAGGGTCTGGGCATGGGAGTGGTTTTGGCGCAGGTGGAGGTATTGGAGGAGGTGCTGGAGGTGGCTTAGGAGGAGGTGGTGGTGCTGGAGGGGCGGCGGTGGGGCGGTGGAGGATTGGGATCGGAGTAGGGATTGGAATAGGAGTTGGTGCCGGAGCTGGTCATGGCGTCGGTGTCGGCTCTGGATCCGGTGGAGGAGGTGGTGGCCATTAA

Protein sequence

MGGSPKWFTLGLIVLCSVLHLSAIALGDDKLDKNGFGDDDCWGRRCGGRFGGRGPGFGRGGPGREGGLGGGGGGGFGGGGGRGGGFGAGGGVGGGAGGGVGGGGGFGGGGGGGLGGGSGHGGGFGAGGGVGGGAGGGVGGGGGFGGGGGGGVGGGSGHGGGFGAGGGVGGGVGGGAGGGGGGGGGGGGGGGVGGGSGHGGGFGAGGGLGGGVGGGTGGGGGGGGGGGGGGLGGGSGHGGGFGAGGGVGGGAGGGIGGGGGAGGGGGGGIGGGSGHGSGFGAGGGIGGGAGGGLGGGGGAGGAAVGRWRIGIGVGIGIGVGAGAGHGVGVGSGSGGGGGGH
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011659702.14.2e-4883.48glycine-rich cell wall structural protein 1 [Cucumis sativus] >KGN43514.1 hypoth... [more]
XP_023511646.17.3e-4580.52glycine-rich cell wall structural protein 1-like [Cucurbita pepo subsp. pepo][more]
CAB4274184.12.4e-4382.42unnamed protein product [Prunus armeniaca][more]
KAG7011907.19.0e-4380.00hypothetical protein SDJN02_26814, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6572290.12.2e-4180.00hypothetical protein SDJN03_29018, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
P097895.5e-3572.32Glycine-rich cell wall structural protein 1 OS=Petunia hybrida OX=4102 GN=GRP-1 ... [more]
Match NameE-valueIdentityDescription
A0A0A0K3J82.0e-4883.48Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043560 PE=4 SV=1[more]
A0A6J5UFK51.1e-4382.42Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS22601 PE=4 S... [more]
A0A6J5WSF62.0e-4079.94Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS22343 PE=... [more]
A0A5E4EQA01.4e-3878.95PREDICTED: glycine-rich cell wall structural OS=Prunus dulcis OX=3755 GN=ALMOND_... [more]
A0A5N5NQZ72.3e-3674.06Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_003432 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01228EGGSHELLcoord: 139..149
score: 45.45
coord: 38..49
score: 31.25
coord: 180..198
score: 50.0
coord: 108..123
score: 54.69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..74
NoneNo IPR availablePANTHERPTHR40903GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1-LIKEcoord: 4..61
coord: 50..192
coord: 183..339

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Sgr025068Sgr025068gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sgr025068.1.exon1Sgr025068.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Sgr025068.1cds.Sgr025068.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Sgr025068.1Sgr025068.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071555 cell wall organization
cellular_component GO:0005576 extracellular region