Sgr022275.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr022275.1
Type	mRNA
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Unknown protein
Location	tig00154107: 74461 .. 77640 (+)
Sequence length	921
RNA-Seq Expression	Sgr022275.1
Synteny	Sgr022275.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGGCAAGCTTTTGACTACTTTATACAGAAGAACAACCCAAGGCAAACACTGGTGGGTTCAGAAGAATATGTGGCCACGTAGGATTGACTTCTCCAAAGAATACTTGTGGGCCCTAGTTCCGACTTCTGCCAATTTACAAAGTTGGTAAAAATTAGTAACTGCTGTATATATATATATTTTTAGTTTAACCAATCGAGCTATATTTTTGTCAACGTAAGTGTTGCATTGCAGCGTATTGTATTATATTTTTCAAATATTCTTACAGACAAACTAATTAAAATTATGGTTCAGATATACAACTTTATCACCTTTCTCATATTAAAAATACTTGATTGCTTCTTTTTTCTATATTCATTTTTCTTGTTGTGATTTTTGTCAAAGTTAGGTGTAGGATTGAAGACTTAAAGCGTTTCAAAGCTTCTATTTTATTTGACTACATCAATTTAAATACAAGATTCTACCTAAGTGCAAGGAAAAGAAACAGAATCACTAAGTTTGGAAGCATTAATTATCTAAGTTTGAGCAGGTTGAATTTACGGCATATATTAACGTAAATATGATTTGACTGTAGACATCTAGAATAAAATAGACACAAATTTTTGAAATCCGACTTCTCTTTAAAGCTAGAATCAAATGAATAAACAAAGATAAAGTTTTGAATTGATAACTTGGGCTTCATTTTCAAAACCTTCGAGGTTAAACAAAGGGTGCAACCTAAAAAAGAGAGATTCCCCACTTGACTTGGACTTTTTGGGCCAAGCATTTCGTAAACTAACCAACCCATTAAACAATCCAAGATTATGATAAATAGAACATCTCTTAAGTAGCATGTAATTCTACATACAGTAGTAAAGTAAATCAAAATATCAAATTTTAAATAACTGTTTCAAGATTGCATTGACAAAGTTTCGAAGAGTATATCTTGCAAGAAAGAAACAATTGAGCTAACCTAACATAGTTAATGGTTAAGGCATGTCTACAAGAGGTCGTCTTCATCCCATATTTATAATGTAATATTATAGAAAAAAAAAATCTGAATTTGAAAATTTGATTATTTTTCTGCATTATTACTGAGATAGGAATTTATTGGTCTTGCAATATTTTATCAAATATGCAAAATGAAGTACTCTTATTTCGGTCTGCTTAAAGTGTTAGGTAACCTTGGTGGGAAGCAATGGAATCTTTGGGCGTCTGACACTTAAAAAGAGAAGGGTTCAATTTGAAAGGATGTGAGAAATAAGTGAAATGGTTTAACGCAAGGTGAAGTGAGGAATATGGAAAGGGAAATGAGGGCAGGGCAAATTGGTTGGAAGAGCAGTAAGACCCAGTGGAGTGGCGACTGTTTTGAAGTCCGAAGTCGGAAGGAACCCATTTCCATTTCATATGAATTTCAGGCGCAGCGCAGTGCAGCAGAGCGAGCCCTGTTGGAAAAGTGAAAGCCCATTGCGGCCACTGCCTGCCTTTGTCAATTTATCAAACAGGTAAACTGCAACTCTCTCTATTCTATTCTATTCTATCTGTGTTTCATAAAATATCAAATTCTCTCTCACAACTCAATCATTGAAAAAGTTTACCAGCTCACGTTAGCAGAGCAGAGGCCACAAGTCGAACAGTGCCTCGAGTTTTTAAAGAAAGGAAAAAAAAAAACCCTGCCACTGCGCTCTGCCCTCTCTGCCCTCTGCGGCTGTGTCTGGTGAATGGTGATGGTGGCAGAGCGGTGTGTGAAGTGAACCCCACCTCCATTACCACGAGTCCACTCACCGCAAAAACGTCTCCTGTTCCGACAGTACTATAGTTCGGAAAACGCTTCGGTAGATCGACGGAGATGATGATGACGCCATGTCCTTTTTGTTTTTCCATCGAAACTGGGGTCCTCCTAGTCGTCCCTTCCCTTCCCTTCCAATTCATTTCAATTTGAAGGTCCCATCCTTTGGGATTTGTGCCCATTTCTTCAATTTCATTGCGGTTTCTTTTCTTTTTCTCAAGTTGAGGTCTGCGTCTGCGTCTGCTTCTGCAGCCAGATTACACTCCTCCTCATTGCTAGTTTATGATCCCCATCTTTACACTTGGGGTTGGGGCCTTTCTAGGTTTGCTTTATTTCTTAATTCTTGAGCAACAAATTAGTTCTTAGGCATAATGTAGGAAAGGGTATTAAAAGGACACAAACTTCTCTTTTTTCAAGATCATCTTCCTGAACTGCAACTGCGAGGCAACCCCACAGAGTTATGGCCATTTGTCCATACATCTGAAGGTTGGGACCATTTCAGTCTACCTCAATGCATTCAAGCCCCCAACCTCTTCCTTTATGTTAGAATTCAACAGCTTGCTTAAATGAATGATCAGGTTCATACTGGAAACACATGTTACGAAGTTTCAGTTCTTTTTTAATATGCTTCTTTTAAAGAAATGAGAAAGGTTTTAGCTTAGTTAGAAAGTTTAGCGATTAATAAAGAATGGTTGTTGTGTATCTAAGATTGTGCCAACTATAAGAAAAAGTTTTTTTTTTTTTTTTTAAGCTTGCATTTTCCACAAGAAAGCTGGACAAAGGAGAGTGAAAGAATATAGAAGAAGAAGAAGAAGAAGTTGCCCAGAAAACGAAACAAAGAACAAAATATAGTAACAATGTCGGAAAGGCCTTTATTTCTGCTGATTTGTTGTTGGCACAGACTCCGGACTTTGATGCAAGAATTTGTTTAATAATAAAAAGAAATTTCTCCTCCCAGAGAGAGAGGGAGGATGAGTGGTGTGTCGTTGAAAACTTTGTGAATGACTGTGTTAGTTGTAGACTGCTGTAGTCTCTCTCTCTCTCCTACGTAGTGCTCACGTGGGATCTGAGATTGTTGCTTCCATCGTGCTTTTCGCTCTTTCCTCTGCATAGCAGTGGGTGGAGTGGTGAGTCACCAGGGCAGGGCAGCGCCTCTCTCCACCCTACGCAGTTGCAGAGGCAGACCCAGAGAAGGCAAAGACAAAAATCACTGAAAGATCCACACACGCATCCACATGGCTTTCTTACTCCAAATTCTCACCCTCAACTCAACTCCTCTCACCCATCTACTCATCAGACGCCTTAAATTTTGCTAAATGGGTTCGTACAAAACAGACACTCCCATATGGCCATTTCAGAGCAGCCTTTTTCACCTGCCGTCTTTACCTTTACTATTACCGCCTCCCATAA

mRNA sequence

ATGTTGGGCAAGCTTTTGACTACTTTATACAGAAGAACAACCCAAGGCAAACACTGGTGGGTTCAGAAGAATATGTGGCCACGTAGGATTGACTTCTCCAAAGAATACTTGTGGGCCCTAGTTCCGACTTCTGCCAATTTACAAAGTTGGCGCAGCGCAGTGCAGCAGAGCGAGCCCTGTTGGAAAAGTGAAAGCCCATTGCGGCCACTGCCTGCCTTTGTCAATTTATCAAACAGCAGAGCAGAGGCCACAAGTCGAACAGTGCCTCGAGTTTTTAAAGAAAGGAAAAAAAAAAACCCTGCCACTGCGCTCTGCCCTCTCTGCCCTCTGCGGCTGTGTCTGGTGAATGGTGATGGTGGCAGAGCGGTGTGTGAAGTGAACCCCACCTCCATTACCACGAGTCCACTCACCGCAAAAACGTCTCCTGTTCCGACAGTACTATATCGTCCCTTCCCTTCCCTTCCAATTCATTTCAATTTGAAGGTCCCATCCTTTGGGATTTGTGCCCATTTCTTCAATTTCATTGCGGTTTCTTTTCTTTTTCTCAAGTTGAGGTCTGCGTCTGCGTCTGCTTCTGCAGCCAGATTACACTCCTCCTCATTGCTAGTTTATGATCCCCATCTTTACACTTGGGGTTGGGGCCTTTCTAGGGCAGGGCAGCGCCTCTCTCCACCCTACGCAGTTGCAGAGGCAGACCCAGAGAAGGCAAAGACAAAAATCACTGAAAGATCCACACACGCATCCACATGGCTTTCTTACTCCAAATTCTCACCCTCAACTCAACTCCTCTCACCCATCTACTCATCAGACGCCTTAAATTTTGCTAAATGGGTTCGTACAAAACAGACACTCCCATATGGCCATTTCAGAGCAGCCTTTTTCACCTGCCGTCTTTACCTTTACTATTACCGCCTCCCATAA

Coding sequence (CDS)

ATGTTGGGCAAGCTTTTGACTACTTTATACAGAAGAACAACCCAAGGCAAACACTGGTGGGTTCAGAAGAATATGTGGCCACGTAGGATTGACTTCTCCAAAGAATACTTGTGGGCCCTAGTTCCGACTTCTGCCAATTTACAAAGTTGGCGCAGCGCAGTGCAGCAGAGCGAGCCCTGTTGGAAAAGTGAAAGCCCATTGCGGCCACTGCCTGCCTTTGTCAATTTATCAAACAGCAGAGCAGAGGCCACAAGTCGAACAGTGCCTCGAGTTTTTAAAGAAAGGAAAAAAAAAAACCCTGCCACTGCGCTCTGCCCTCTCTGCCCTCTGCGGCTGTGTCTGGTGAATGGTGATGGTGGCAGAGCGGTGTGTGAAGTGAACCCCACCTCCATTACCACGAGTCCACTCACCGCAAAAACGTCTCCTGTTCCGACAGTACTATATCGTCCCTTCCCTTCCCTTCCAATTCATTTCAATTTGAAGGTCCCATCCTTTGGGATTTGTGCCCATTTCTTCAATTTCATTGCGGTTTCTTTTCTTTTTCTCAAGTTGAGGTCTGCGTCTGCGTCTGCTTCTGCAGCCAGATTACACTCCTCCTCATTGCTAGTTTATGATCCCCATCTTTACACTTGGGGTTGGGGCCTTTCTAGGGCAGGGCAGCGCCTCTCTCCACCCTACGCAGTTGCAGAGGCAGACCCAGAGAAGGCAAAGACAAAAATCACTGAAAGATCCACACACGCATCCACATGGCTTTCTTACTCCAAATTCTCACCCTCAACTCAACTCCTCTCACCCATCTACTCATCAGACGCCTTAAATTTTGCTAAATGGGTTCGTACAAAACAGACACTCCCATATGGCCATTTCAGAGCAGCCTTTTTCACCTGCCGTCTTTACCTTTACTATTACCGCCTCCCATAA

Protein sequence

MLGKLLTTLYRRTTQGKHWWVQKNMWPRRIDFSKEYLWALVPTSANLQSWRSAVQQSEPCWKSESPLRPLPAFVNLSNSRAEATSRTVPRVFKERKKKNPATALCPLCPLRLCLVNGDGGRAVCEVNPTSITTSPLTAKTSPVPTVLYRPFPSLPIHFNLKVPSFGICAHFFNFIAVSFLFLKLRSASASASAARLHSSSLLVYDPHLYTWGWGLSRAGQRLSPPYAVAEADPEKAKTKITERSTHASTWLSYSKFSPSTQLLSPIYSSDALNFAKWVRTKQTLPYGHFRAAFFTCRLYLYYYRLP

Homology

[Close]

BLAST of Sgr022275.1 vs. NCBI nr
Match: XP_022946453.1 (uncharacterized protein LOC111450506 [Cucurbita moschata])

HSP 1 Score: 95.1 bits (235), Expect = 1.1e-15
Identity = 50/66 (75.76%), Postives = 52/66 (78.79%), Query Frame = 0


Query: 232 DPEKAKTKITERSTHASTWLSYSK--FSPSTQLLSPIYSSDALNFAKWVRTKQTLPYGHF 291
           DPEKAKTKITERSTHASTW S+S     P  QL      +DALNFAKWVRTKQTLPYGHF
Sbjct: 60  DPEKAKTKITERSTHASTWASHSSKILPPPLQLHLLKLITDALNFAKWVRTKQTLPYGHF 119

Query: 292 RAAFFT 296
           RAAFFT
Sbjct: 120 RAAFFT 125

[Close]

BLAST of Sgr022275.1 vs. NCBI nr
Match: KAG6599540.1 (hypothetical protein SDJN03_09318, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 82.0 bits (201), Expect = 9.6e-12
Identity = 51/85 (60.00%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 81  AEATSRTVPRVFKERKKKNPAT-------ALCPLCPLRLCLVNGDGGRAVCEVNPTSITT 140
           AEATS TVPR FK  K +NPAT       ALCPLCPL LCLVNGDGGRA CEVNPT + T
Sbjct: 54  AEATSGTVPRAFK--KMENPATALCALRSALCPLCPLWLCLVNGDGGRAGCEVNPTYVVT 113

Query: 141 SPLTAKTSPV--PTVLYRPFPSLPI 157
           SPL+   +     T L+R F S  I
Sbjct: 114 SPLSPPLNKQINKTPLFRRFYSSEI 136

[Close]

BLAST of Sgr022275.1 vs. NCBI nr
Match: KAG7030518.1 (hypothetical protein SDJN02_08866, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 67.0 bits (162), Expect = 3.2e-07
Identity = 37/52 (71.15%), Postives = 38/52 (73.08%), Query Frame = 0


Query: 81  AEATSRTVPRVFKERKKKNPAT-------ALCPLCPLRLCLVNGDGGRAVCE 126
           AEATS TVPR FK  K +NPAT       ALCPLCPL LCLVNGDGGRA CE
Sbjct: 54  AEATSGTVPRAFK--KMENPATALCALRSALCPLCPLWLCLVNGDGGRAGCE 103

[Close]

BLAST of Sgr022275.1 vs. ExPASy TrEMBL
Match: A0A6J1G3V0 (uncharacterized protein LOC111450506 OS=Cucurbita moschata OX=3662 GN=LOC111450506 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.3e-16
Identity = 50/66 (75.76%), Postives = 52/66 (78.79%), Query Frame = 0


Query: 232 DPEKAKTKITERSTHASTWLSYSK--FSPSTQLLSPIYSSDALNFAKWVRTKQTLPYGHF 291
           DPEKAKTKITERSTHASTW S+S     P  QL      +DALNFAKWVRTKQTLPYGHF
Sbjct: 60  DPEKAKTKITERSTHASTWASHSSKILPPPLQLHLLKLITDALNFAKWVRTKQTLPYGHF 119

Query: 292 RAAFFT 296
           RAAFFT
Sbjct: 120 RAAFFT 125

The following BLAST results are available for this feature:

BLAST of Sgr022275.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946453.1	1.1e-15	75.76	uncharacterized protein LOC111450506 [Cucurbita moschata]	[more]
KAG6599540.1	9.6e-12	60.00	hypothetical protein SDJN03_09318, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7030518.1	3.2e-07	71.15	hypothetical protein SDJN02_08866, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Sgr022275.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr022275.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G3V0	5.3e-16	75.76	uncharacterized protein LOC111450506 OS=Cucurbita moschata OX=3662 GN=LOC1114505...	[more]

BLAST of Sgr022275.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sgr022275	Sgr022275	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sgr022275.1.exon1	Sgr022275.1.exon1	exon
Sgr022275.1.exon2	Sgr022275.1.exon2	exon
Sgr022275.1.exon3	Sgr022275.1.exon3	exon
Sgr022275.1.exon4	Sgr022275.1.exon4	exon
Sgr022275.1.exon5	Sgr022275.1.exon5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Sgr022275.1	cds.Sgr022275.1	CDS
cds.Sgr022275.1	cds.Sgr022275.1_2	CDS
cds.Sgr022275.1	cds.Sgr022275.1_3	CDS
cds.Sgr022275.1	cds.Sgr022275.1_4	CDS
cds.Sgr022275.1	cds.Sgr022275.1_5	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sgr022275.1	Sgr022275.1-protein	polypeptide