Sgr021896.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr021896.1
Type	mRNA
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	selenoprotein F-like
Location	tig00153841: 840642 .. 845750 (-)
Sequence length	594
RNA-Seq Expression	Sgr021896.1
Synteny	Sgr021896.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGATTTTCAGGGACCTAAAGAAGACGGCTACGGCGGTGACGGTGGCGGCGGCGATAATTTTTATTGCGTCGGTGCCGTTGGCTTGGTCAAAGGAGCAACTCAGCTCCAGGGAATGTGAGGATCTAGGTTTCACAGGGCTTGCTCTCTGTTCTGATTGCCACACTTTAGCTGAATACATCAAAGATCAAGGTGACGGCATTTTGATTCACTCCTCACGGTTTCTCTCTACTCATTCTTTATTAGGTTTTGAATTTATATCTTTGCGGATGCATTTCTTCCCTTTTCTGGCTATTTCTCATGAATTCACCGCAGCGTAATGGATTTTCTTCATTTCTTTTATCAATTCTCCACGTTTCGTTTGTTTTTGAACGGTTGATTATTCGTCTTGTGGTCGGTTTCGATTATAGATTTTTGCTTGATTTGGATTTTGGGTTTCCAGATTACTTTTTTATAGTCTGATGTGTGAAGTGTTGGTATTAATTTCAATATCTTATATCAATTTCTTAGTGATTGTGGATAGAGTTTCCTGATGTTAGTTCTTATTTTGTTCGAAGATGCGGTAGTAATGAGTTCAGAGACCTATACCTAGTACCTACTTCTGGGATTGCCTGGAAATTTTGTTAGGGAAGAAGATGGTTTCTGAAATTATGATGTAATCATTCATCATTTTTTCAGATTTGCTCAATAGATTACAAAACTTGCAAAGAACAAATAAGGGCAAGAAAAAAGTCCTTTAGGTTTTAAATTAATAGATCATCTTAGTCCTGTGATATGTTGATGATGTTTTTCAGAAATCAGGTACCATGTTTTTCAGATAAGTTTCGATTCGAATGCAATTTGTGATTGTTAGTCCTTTTGGTGAATAAGTTTATTTTCAATTCTGGCAATTACTTCTTGTCCAACCCCCACTGACCATAATATCTTTTGATTGATTAAATCTTTCTCTGTGAAAAGGGATACACTCCTGTTTGATTGCTAAGCCCCAGCATAATTTTAGAGGACAAAGATCTAAGGGGGTTTTTTGGAACTATGTTGAGAAACAATTGTTTGTGTTTTAGAGCAAAATTTTTGTGAAAGCATTTAAGCAACCGTTTTTGAAAAGTTGTACACTTGTTCTTTTTTAGTTCTGTTTTCATATACATCTATTTTTTTTTAGCTATTTCGAAGATTTTCTCTCTTTAAAAATCATGTACTTGTGAATAGTAATTCTAAGTGCACAATAAACTTAATTATTACAAGTCATCCCATCACAACTCTTAACAACAATTTTGAAAATAAGAATAGGAAGCTGTTTTTCAAGACAGTGTCCAAATAGCCATATTTGCGTGAATGTAAAAAATCACACTATTTTAAAGGCACTTTCTAAAATCCTACATACCCCCTCCTCTTCTCCCAATCACAGTTCTTAAAAAGAAACTGTTTTACTAAATAGAACCCGGACAGCAATTTTTTGCAGAAATAAGAAAATGCTTAGGCACTTGGCTGAAGGAAAACTTTTTCCATGCATCAAACTAGCTTTATTAATTGAATATCATTCTTTGAAAAGCAGATCCCCCCCCCCCCCCCTATGTTAATGCTTTTTGAAACAAGAGATGGACGAGTTAAGATAACCTCTTGCCTTTTAGTGTCCTAGTTAAAGGATTTGTGAGTGTACAATTGAGCACTGCAGAAACGTAGTAAAAAATGTTGTAATACTAAATGATGAATACAGTGAAGGTTGCACTGGCTATTCTGGCAACACTGGATTTGTGAAGGCAACATAATGACTTCAAATATTCTTTATCCAAAATCCATAGGAAGAAGAGTAGTGATAGTATGCAAAATCTGCAACTGTCTCATGTCAGCTTTATATTTTTGAAGTATGCATTGTTTTTAATATGCGTGGCATTCTCAAGTCCAAATTTTGTATCGCAGAATTAGTATCAGACTGTTTGAAGTGTTGCGCAGAGGATTCTGATGATGCCACGAGTAAGGTACACAAAATGTAATAAATGTGCTGATTTCTGGAGGCTGGATTTCATCGACTTACTATTCCATTTGAGAATAATGTATCATGCTTCTATACTGAATGCGTCTACATCCCTGTGGTAGACATGCCAACTGAAAACACATTAGCTTAATCTATTATACAGTACAAACAATTTATGCCTGCATGTAATTATCACAAGTCACAACTAAGATCCAAAATTAGGTTTCAGTAAATGAAGAAAACGTCATCTTTAGAAAAAGGTGAAGAGAGAGATGTGCAACGAATATATCAGTGCATATTACAACCCTGTTGAACATGGGTGGTTTGAAATATTTGGCTCGTCAATGAGCAAGTATTATCTATTAATTCCCCATTTGTAAATTACCATAGAATTTTGAGATTCTTATATATCATAGTGTTTCTGAAGCTTCTTGACGGATATTCCTCACTCATTATCAGACAATTACTTATTCACAAACCTCATGTGGATCTAGTAACTTTCATTTTCTATCTCATGTAAAATCCTTTTTGTTCTACTTAGCCCTTTCCCCCTCTAGGGGTATTTTAGTGATAGGTTCTATAAGAACTAGACAATGCTATAGGGTCAAATACCTAGCGACAAACTCCTATCTTTCTTTCATTCCAGTAGTTCTAAACAAATTACTGGTTCCTAAATTTTGTCCATCATGGTTGTGGTTTAAGGGAAGTGACTGATATATATCCAGAAAGCAGAATCTCTCCAGGAGAATGAGTTTTGAGTTCCACTCTCCCCCTAATTCAGTACTCTGTTATTGGTTGTATTTCATAACTATTTGCATTTGTCTGTCTTTTCATTTATTTTGACAAAGGATGAAAGGCAATTATCCGAACTCATTAACTGCAGATAACTTATTCTGGTGCTGTGCTGGAGGTCTGCATGAGGAAACTAGTTTTCTATCCTGAAATTGTTGGCTTCATTGAAGAAGAAAAGGATCAATTCCCTTCAGTTAAGGTTCAATATATCTTCAACTCTCCGCCAAAGCTGGTCATGCTGGATGATGAGGGCCAACACAAAGAAAGCATCAGGTAACTTTTAAATGACCAAAAATTGCTCGCTATAGTACTTTTGGAGAGACCCTATTAAGATCGTAAATGTTGATGTTTTTTTTTATGAGAACCATAACTTTTATTAAGATAAACAAAATAATACAAATAGATATAACGAAAAGAAGAGTCTATACAAAAAACCAAAACTAGAGTCTACAAAAAGGCTCTAGTTGTTAAGAATAAAAATAAAGGATAGTTACAAATAAGGGTGTCAACGAAGCAGGACGGGAAAGTGAATGTTTGTCCATCCCTATCTTCGCTCCCCAAATCATTCTCCATCCCCACAAAAGTTCCTGTCAGATTGATCGGGGATCGGGGATCGGGGGTTTCCCACGGGAAAAGTCGCGGGGGTCGGGTTCTCTGCTGAAAATTTTTCCCAGTTTAGTTTTACATTTTTGCTTGTTGGGCTTTATTTAGTTATTTTGGGCTATATATATATATATATGACTAAAAATTATATAATTAAAATATTATTTTTAGGGATCGGACTCGGAGCATTTTTCCATCCTCGTCCCTGTCCCCAAAATTAAAATGGAAAAAAAAAATTCCATCCCTGTCCCCATTTAAAACGGGGAATTCTAGTAGGAAATTTGACACCTCTAGTTACAACAGGGCAACTAGCGGGTTGTCATAGGAAATTTTGACACTTTTGATTTAGAGAATAAGATACTCAAAGGAGAGACTTTAAATGTAGCCAAAGACCGCATCTTCCTCAATAACACTCGACACCTCTAAAATCCTCCTAATGACTTGTAATATTGTCTAGAAGAATGCTTGCATCCATAACTTAGAATTCATATAATATGTAAGAGCAAAATCAAGTGAATGCAGAATATGTTGAGTTTAAGATGGTGTATAGAGCGATATAGATTTTTCTTTGGCTTGTGGGTAGTGGCCATTGATAATTGATATTGCTTATAAGTTGGCATTGAAAATTTGACCAACTTTTTTTTTTTTTTTTTCCAGGATTGACAATTGGAAACGTGAACATATTTTGCAGTTTCTGCAAGAGAAGGTTAAGCGTTCTTCAGCAGTTTAAGGTTTTTTTTTTCCTTTTTTTAATCTCTCTGTAAAAAACTTTATGCAGAAGTCGAATGAAACAGTTGTCAACCAAAAACTTGGGGAAAACATTGATTTTGTCAATTTGAAGGATAGTTGGAAAGATAACTCATTTATTTGTCTAAATTTTTTCACTTTTTAAAAATAGTAAAATATTTTTTAAAAAATTTTAACTAATCCTTCAAAAACAATAAAGTATATTTTCAAAATTTTATTTTTTAAATTTTTAAAAGTTAACTATGATTTCAACACAGTTTTCCTTTCATCATATAAGTATAATAATTAAATAATTTAAATCGTTATTAACATTGGTTAATATTGCAATACATCTTACATTCTTTTTTTAATAAAGTATTAATAAAAAATAGTCGATCACTTGGGTTTAGATAAATTTTATTGGTTTTGATCAATTCAATTTGATTCTGTCAGTTTCGATTGATTTAGATAAAAAAAACAACTCGAATCAATTGTAAAACCACTCAAATCAATTGTTTACACCTCTGAGAACCATAGAAAAGTGACAGAAAAGAAAAAGTTAAATTTTATGTGAATCGATGCATTTAGTTTACTTGCCATGAAACAAAAGGCAAATAGAATCCAAAACATTTTTTTTACTTTCATCTCCTGAAAGAGTTAAGAAAATGAGAAAGTAAAGATCATCTAATTACTCATGTCTGAATGAACCTCAGGCTTGTACAGGTCTAATGTAAAAGAAAAAAATGATACAATCGAACTGCTTTTATAACACCAATTTGATGATGCAATGGCGTATGATTGACTATCTAAAGTTCAAAAAACTGACCATTTGGGCAGAGCTACAAATTTTTGCAGTGAATTAGACGAAGAAAACGATTACCCTTTTAAACCAGAAGATCTCCCGACTTCGATCGACCCGACTGCATCATTGTGTTGCGAAACATTCTTCTCAGAGTTGGAGGAAGAAGTCTTGACAGGAGCCCAGATGTCTGCTCCATTGCAGCGAGCTATTTGA

mRNA sequence

ATGCAGATTTTCAGGGACCTAAAGAAGACGGCTACGGCGGTGACGGTGGCGGCGGCGATAATTTTTATTGCGTCGGTGCCGTTGGCTTGGTCAAAGGAGCAACTCAGCTCCAGGGAATGTGAGGATCTAGGTTTCACAGGGCTTGCTCTCTGTTCTGATTGCCACACTTTAGCTGAATACATCAAAGATCAAGAATTAGTATCAGACTGTTTGAAGTGTTGCGCAGAGGATTCTGATGATGCCACGAGTAAGATAACTTATTCTGGTGCTGTGCTGGAGGTCTGCATGAGGAAACTAGTTTTCTATCCTGAAATTGTTGGCTTCATTGAAGAAGAAAAGGATCAATTCCCTTCAGTTAAGGTTCAATATATCTTCAACTCTCCGCCAAAGCTGGTCATGCTGGATGATGAGGGCCAACACAAAGAAAGCATCAGTGAATTAGACGAAGAAAACGATTACCCTTTTAAACCAGAAGATCTCCCGACTTCGATCGACCCGACTGCATCATTGTGTTGCGAAACATTCTTCTCAGAGTTGGAGGAAGAAGTCTTGACAGGAGCCCAGATGTCTGCTCCATTGCAGCGAGCTATTTGA

Coding sequence (CDS)

ATGCAGATTTTCAGGGACCTAAAGAAGACGGCTACGGCGGTGACGGTGGCGGCGGCGATAATTTTTATTGCGTCGGTGCCGTTGGCTTGGTCAAAGGAGCAACTCAGCTCCAGGGAATGTGAGGATCTAGGTTTCACAGGGCTTGCTCTCTGTTCTGATTGCCACACTTTAGCTGAATACATCAAAGATCAAGAATTAGTATCAGACTGTTTGAAGTGTTGCGCAGAGGATTCTGATGATGCCACGAGTAAGATAACTTATTCTGGTGCTGTGCTGGAGGTCTGCATGAGGAAACTAGTTTTCTATCCTGAAATTGTTGGCTTCATTGAAGAAGAAAAGGATCAATTCCCTTCAGTTAAGGTTCAATATATCTTCAACTCTCCGCCAAAGCTGGTCATGCTGGATGATGAGGGCCAACACAAAGAAAGCATCAGTGAATTAGACGAAGAAAACGATTACCCTTTTAAACCAGAAGATCTCCCGACTTCGATCGACCCGACTGCATCATTGTGTTGCGAAACATTCTTCTCAGAGTTGGAGGAAGAAGTCTTGACAGGAGCCCAGATGTCTGCTCCATTGCAGCGAGCTATTTGA

Protein sequence

MQIFRDLKKTATAVTVAAAIIFIASVPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESISELDEENDYPFKPEDLPTSIDPTASLCCETFFSELEEEVLTGAQMSAPLQRAI

Homology

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BLAST of Sgr021896.1 vs. NCBI nr
Match: XP_023004122.1 (selenoprotein F-like [Cucurbita maxima])

HSP 1 Score: 265.4 bits (677), Expect = 3.9e-67
Identity = 131/147 (89.12%), Postives = 138/147 (93.88%), Query Frame = 0


Query: 1   MQIFRDLKKTATAVTVA---AAIIFIASVPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60
           MQ+F D+KK AT V +A   AAIIFIAS+PLAWSKEQLSSRECEDLGFTGLALCSDCHTL
Sbjct: 1   MQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60

Query: 61  AEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFP 120
           AEYIKDQELV+DCLKCC EDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKD+FP
Sbjct: 61  AEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDKFP 120

Query: 121 SVKVQYIFNSPPKLVMLDDEGQHKESI 145
           SVKVQYIFNSPPKL +LDDEGQHKESI
Sbjct: 121 SVKVQYIFNSPPKLTLLDDEGQHKESI 147

[Close]

BLAST of Sgr021896.1 vs. NCBI nr
Match: XP_022960129.1 (selenoprotein F-like [Cucurbita moschata])

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-66
Identity = 129/147 (87.76%), Postives = 138/147 (93.88%), Query Frame = 0


Query: 1   MQIFRDLKKTATAVTV---AAAIIFIASVPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60
           MQ+F D+KK AT V +   AAAIIF+AS+PLAWSKEQLSSRECEDLGFTGLALCSDCHTL
Sbjct: 1   MQLFADVKKPATVVAMAAWAAAIIFMASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60

Query: 61  AEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFP 120
           AEYIKDQELV+DCLKCC EDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKD+FP
Sbjct: 61  AEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDKFP 120

Query: 121 SVKVQYIFNSPPKLVMLDDEGQHKESI 145
           SVK+QYIFNSPPKL +LDDEGQHKESI
Sbjct: 121 SVKIQYIFNSPPKLTLLDDEGQHKESI 147

[Close]

BLAST of Sgr021896.1 vs. NCBI nr
Match: XP_023513576.1 (selenoprotein F-like [Cucurbita pepo subsp. pepo] >XP_023513577.1 selenoprotein F-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 263.5 bits (672), Expect = 1.5e-66
Identity = 129/147 (87.76%), Postives = 138/147 (93.88%), Query Frame = 0


Query: 1   MQIFRDLKKTATAVTV---AAAIIFIASVPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60
           MQ+F D+K+ AT V +   AAAIIFIAS+PLAWSKEQLSSRECEDLGFTGLALCSDCHTL
Sbjct: 1   MQVFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60

Query: 61  AEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFP 120
           AEYIKDQELV+DCLKCC EDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKD+FP
Sbjct: 61  AEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDKFP 120

Query: 121 SVKVQYIFNSPPKLVMLDDEGQHKESI 145
           SVK+QYIFNSPPKL +LDDEGQHKESI
Sbjct: 121 SVKIQYIFNSPPKLTLLDDEGQHKESI 147

[Close]

BLAST of Sgr021896.1 vs. NCBI nr
Match: KAG6592972.1 (Selenoprotein F, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 263.1 bits (671), Expect = 2.0e-66
Identity = 129/147 (87.76%), Postives = 138/147 (93.88%), Query Frame = 0


Query: 1   MQIFRDLKKTATAVTV---AAAIIFIASVPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60
           MQ+F D+K+ AT V +   AAAIIFIAS+PLAWSKEQLSSRECEDLGFTGLALCSDCHTL
Sbjct: 32  MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 91

Query: 61  AEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFP 120
           AEYIKDQELV+DCLKCC EDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKD+FP
Sbjct: 92  AEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDKFP 151

Query: 121 SVKVQYIFNSPPKLVMLDDEGQHKESI 145
           SVK+QYIFNSPPKL +LDDEGQHKESI
Sbjct: 152 SVKIQYIFNSPPKLTLLDDEGQHKESI 178

[Close]

BLAST of Sgr021896.1 vs. NCBI nr
Match: KAG7025384.1 (Selenoprotein F [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 263.1 bits (671), Expect = 2.0e-66
Identity = 129/147 (87.76%), Postives = 138/147 (93.88%), Query Frame = 0


Query: 1   MQIFRDLKKTATAVTV---AAAIIFIASVPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60
           MQ+F D+K+ AT V +   AAAIIFIAS+PLAWSKEQLSSRECEDLGFTGLALCSDCHTL
Sbjct: 1   MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60

Query: 61  AEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFP 120
           AEYIKDQELV+DCLKCC EDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKD+FP
Sbjct: 61  AEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDKFP 120

Query: 121 SVKVQYIFNSPPKLVMLDDEGQHKESI 145
           SVK+QYIFNSPPKL +LDDEGQHKESI
Sbjct: 121 SVKIQYIFNSPPKLTLLDDEGQHKESI 147

[Close]

BLAST of Sgr021896.1 vs. ExPASy Swiss-Prot
Match: A8YXY3 (Selenoprotein F OS=Bos taurus OX=9913 GN=SELENOF PE=2 SV=2)

HSP 1 Score: 82.4 bits (202), Expect = 6.2e-15
Identity = 44/120 (36.67%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 34  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLE 93
           + SS  C +LGF+   LCS C  L ++    +L  DC  CC E++   T K+ Y+GA+LE
Sbjct: 32  EFSSESCRELGFSSNLLCSSCDLLGQF-NLLQLDPDCRGCCQEEAQFETKKL-YAGAILE 91

Query: 94  VCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLVMLDDEGQHKESISELDEEND 153
           VC  KL  +P++  F+  +K + F  ++++Y+  S P L +LDD G   E +S L    D
Sbjct: 92  VCGXKLGRFPQVQAFVRSDKPKLFKGLQIKYVRGSDPVLKLLDDSGNIAEELSILKWNTD 149

[Close]

BLAST of Sgr021896.1 vs. ExPASy Swiss-Prot
Match: O60613 (Selenoprotein F OS=Homo sapiens OX=9606 GN=SELENOF PE=1 SV=4)

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-14
Identity = 44/120 (36.67%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 34  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLE 93
           + SS  C +LGF+   LCS C  L ++    +L  DC  CC E++   T K+ Y+GA+LE
Sbjct: 35  EFSSEACRELGFSSNLLCSSCDLLGQF-NLLQLDPDCRGCCQEEAQFETKKL-YAGAILE 94

Query: 94  VCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLVMLDDEGQHKESISELDEEND 153
           VC  KL  +P++  F+  +K + F  ++++Y+  S P L +LDD G   E +S L    D
Sbjct: 95  VCGXKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTD 152

[Close]

BLAST of Sgr021896.1 vs. ExPASy Swiss-Prot
Match: Q802F3 (Selenoprotein F OS=Danio rerio OX=7955 GN=selenof PE=2 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 2.4e-14
Identity = 44/120 (36.67%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 34  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLE 93
           +LSS  C +LGF+   LCS C  L ++  +Q L   C +CC E++     K+ Y GA+LE
Sbjct: 23  ELSSEACRELGFSSNLLCSSCELLGQFSLNQ-LDLPCRQCCQEEAQLENRKL-YPGAILE 82

Query: 94  VCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLVMLDDEGQHKESISELDEEND 153
           VC  KL  +P++  F+  +K + F  ++++Y+  S P L +LDD G   E +S L    D
Sbjct: 83  VCGXKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTD 140

[Close]

BLAST of Sgr021896.1 vs. ExPASy Swiss-Prot
Match: A1Z623 (Selenoprotein F OS=Sus scrofa OX=9823 GN=SELENOF PE=2 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 2.4e-14
Identity = 44/120 (36.67%), Postives = 67/120 (55.83%), Query Frame = 0


Query: 34  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLE 93
           + SS  C +LGF+   LC  C  L ++   Q L  DC  CC E++   T K+ Y+GA+LE
Sbjct: 32  EFSSESCRELGFSSNLLCGSCDLLGQFDLLQ-LDPDCRGCCQEEAQFETKKL-YAGAILE 91

Query: 94  VCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLVMLDDEGQHKESISELDEEND 153
           VC  KL  +P++  F+  +K + F  ++++Y+  S P L +LDD G   E +S L    D
Sbjct: 92  VCGXKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTD 149

[Close]

BLAST of Sgr021896.1 vs. ExPASy Swiss-Prot
Match: Q923V8 (Selenoprotein F OS=Rattus norvegicus OX=10116 GN=Selenof PE=1 SV=3)

HSP 1 Score: 77.0 bits (188), Expect = 2.6e-13
Identity = 43/120 (35.83%), Postives = 66/120 (55.00%), Query Frame = 0


Query: 34  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLE 93
           + SS  C +LGF+   LCS C  L ++     L   C  CC E++   T K+ Y+GA+LE
Sbjct: 32  EFSSEACRELGFSSNLLCSSCDLLGQF-NLLPLDPVCRGCCQEEAQFETKKL-YAGAILE 91

Query: 94  VCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLVMLDDEGQHKESISELDEEND 153
           VC  KL  +P++  F+  +K + F  ++++Y+  S P L +LDD G   E +S L    D
Sbjct: 92  VCGXKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTD 149

[Close]

BLAST of Sgr021896.1 vs. ExPASy TrEMBL
Match: A0A6J1KPJ2 (selenoprotein F-like OS=Cucurbita maxima OX=3661 GN=LOC111497549 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.9e-67
Identity = 131/147 (89.12%), Postives = 138/147 (93.88%), Query Frame = 0


Query: 1   MQIFRDLKKTATAVTVA---AAIIFIASVPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60
           MQ+F D+KK AT V +A   AAIIFIAS+PLAWSKEQLSSRECEDLGFTGLALCSDCHTL
Sbjct: 1   MQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60

Query: 61  AEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFP 120
           AEYIKDQELV+DCLKCC EDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKD+FP
Sbjct: 61  AEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDKFP 120

Query: 121 SVKVQYIFNSPPKLVMLDDEGQHKESI 145
           SVKVQYIFNSPPKL +LDDEGQHKESI
Sbjct: 121 SVKVQYIFNSPPKLTLLDDEGQHKESI 147

[Close]

BLAST of Sgr021896.1 vs. ExPASy TrEMBL
Match: A0A6J1HA08 (selenoprotein F-like OS=Cucurbita moschata OX=3662 GN=LOC111460968 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 5.6e-67
Identity = 129/147 (87.76%), Postives = 138/147 (93.88%), Query Frame = 0


Query: 1   MQIFRDLKKTATAVTV---AAAIIFIASVPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60
           MQ+F D+KK AT V +   AAAIIF+AS+PLAWSKEQLSSRECEDLGFTGLALCSDCHTL
Sbjct: 1   MQLFADVKKPATVVAMAAWAAAIIFMASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60

Query: 61  AEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFP 120
           AEYIKDQELV+DCLKCC EDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKD+FP
Sbjct: 61  AEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDKFP 120

Query: 121 SVKVQYIFNSPPKLVMLDDEGQHKESI 145
           SVK+QYIFNSPPKL +LDDEGQHKESI
Sbjct: 121 SVKIQYIFNSPPKLTLLDDEGQHKESI 147

[Close]

BLAST of Sgr021896.1 vs. ExPASy TrEMBL
Match: A0A6J1GQK6 (selenoprotein F-like OS=Cucurbita moschata OX=3662 GN=LOC111456577 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.8e-66
Identity = 126/144 (87.50%), Postives = 134/144 (93.06%), Query Frame = 0


Query: 1   MQIFRDLKKTATAVTVAAAIIFIASVPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEY 60
           MQ+   +K  AT VT+A AIIFIAS+PLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEY
Sbjct: 1   MQLLTGVKNPATMVTMATAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEY 60

Query: 61  IKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFPSVK 120
           IKDQELV+DCLKCC EDSDDATSKITYSGA+LEVCMRKLVFYPEIVGFIEEEKDQFPSV 
Sbjct: 61  IKDQELVTDCLKCCTEDSDDATSKITYSGAMLEVCMRKLVFYPEIVGFIEEEKDQFPSVN 120

Query: 121 VQYIFNSPPKLVMLDDEGQHKESI 145
           VQY FNSPPKL++LDDEGQHKESI
Sbjct: 121 VQYTFNSPPKLILLDDEGQHKESI 144

[Close]

BLAST of Sgr021896.1 vs. ExPASy TrEMBL
Match: A0A1S3CC00 (15 kDa selenoprotein OS=Cucumis melo OX=3656 GN=LOC103498956 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.0e-65
Identity = 129/147 (87.76%), Postives = 137/147 (93.20%), Query Frame = 0


Query: 1   MQIFRDLKKTATAVTV---AAAIIFIASVPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60
           MQ+   +   ATAVTV   AAAIIFI+S+PLAWSKEQLSSRECEDLGFTGLALCSDCHTL
Sbjct: 1   MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60

Query: 61  AEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFP 120
           AEYIKDQELV+DCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEE+KDQFP
Sbjct: 61  AEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEDKDQFP 120

Query: 121 SVKVQYIFNSPPKLVMLDDEGQHKESI 145
           SVKVQY FNSPPKL++LDDEGQHKESI
Sbjct: 121 SVKVQYTFNSPPKLILLDDEGQHKESI 147

[Close]

BLAST of Sgr021896.1 vs. ExPASy TrEMBL
Match: A0A6J1JXH9 (selenoprotein F-like OS=Cucurbita maxima OX=3661 GN=LOC111488731 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 3.1e-65
Identity = 125/144 (86.81%), Postives = 133/144 (92.36%), Query Frame = 0


Query: 1   MQIFRDLKKTATAVTVAAAIIFIASVPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEY 60
           MQ+   +K  AT VT+A AIIFIAS+PLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEY
Sbjct: 1   MQLLTGVKNPATMVTMATAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEY 60

Query: 61  IKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFPSVK 120
           IKDQELV+DCLKCC EDSDDATSKITYSGA+LEVCMRKLVFYPEIVGFIEEEK QFPSV 
Sbjct: 61  IKDQELVTDCLKCCTEDSDDATSKITYSGAMLEVCMRKLVFYPEIVGFIEEEKYQFPSVN 120

Query: 121 VQYIFNSPPKLVMLDDEGQHKESI 145
           VQY FNSPPKL++LDDEGQHKESI
Sbjct: 121 VQYTFNSPPKLILLDDEGQHKESI 144

[Close]

BLAST of Sgr021896.1 vs. TAIR 10
Match: AT1G05720.1 (selenoprotein family protein )

HSP 1 Score: 216.1 bits (549), Expect = 2.6e-56
Identity = 100/137 (72.99%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 8   KKTATAVTVAAAIIFIASVPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV 67
           ++ A  V ++A +I I +  ++ +KEQLS++ECEDLGF+GLALCSDCH+L+EY+KDQELV
Sbjct: 4   REMAKMVVLSAMMILILASTIS-AKEQLSTKECEDLGFSGLALCSDCHSLSEYVKDQELV 63

Query: 68  SDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFPSVKVQYIFNS 127
           SDCLKCCA+DS+D+ SK+TYSGA+LEVCMRKLVFYPEIVGFIEEEK++FPSVKVQYIFNS
Sbjct: 64  SDCLKCCADDSEDSMSKVTYSGAILEVCMRKLVFYPEIVGFIEEEKEKFPSVKVQYIFNS 123

Query: 128 PPKLVMLDDEGQHKESI 145
           PPKL+MLD++G+HKESI
Sbjct: 124 PPKLIMLDEDGEHKESI 139

The following BLAST results are available for this feature:

BLAST of Sgr021896.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023004122.1	3.9e-67	89.12	selenoprotein F-like [Cucurbita maxima]	[more]
XP_022960129.1	1.1e-66	87.76	selenoprotein F-like [Cucurbita moschata]	[more]
XP_023513576.1	1.5e-66	87.76	selenoprotein F-like [Cucurbita pepo subsp. pepo] >XP_023513577.1 selenoprotein ...	[more]
KAG6592972.1	2.0e-66	87.76	Selenoprotein F, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7025384.1	2.0e-66	87.76	Selenoprotein F [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Sgr021896.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8YXY3	6.2e-15	36.67	Selenoprotein F OS=Bos taurus OX=9913 GN=SELENOF PE=2 SV=2	[more]
O60613	1.1e-14	36.67	Selenoprotein F OS=Homo sapiens OX=9606 GN=SELENOF PE=1 SV=4	[more]
Q802F3	2.4e-14	36.67	Selenoprotein F OS=Danio rerio OX=7955 GN=selenof PE=2 SV=2	[more]
A1Z623	2.4e-14	36.67	Selenoprotein F OS=Sus scrofa OX=9823 GN=SELENOF PE=2 SV=2	[more]
Q923V8	2.6e-13	35.83	Selenoprotein F OS=Rattus norvegicus OX=10116 GN=Selenof PE=1 SV=3	[more]

BLAST of Sgr021896.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KPJ2	1.9e-67	89.12	selenoprotein F-like OS=Cucurbita maxima OX=3661 GN=LOC111497549 PE=3 SV=1	[more]
A0A6J1HA08	5.6e-67	87.76	selenoprotein F-like OS=Cucurbita moschata OX=3662 GN=LOC111460968 PE=3 SV=1	[more]
A0A6J1GQK6	2.8e-66	87.50	selenoprotein F-like OS=Cucurbita moschata OX=3662 GN=LOC111456577 PE=3 SV=1	[more]
A0A1S3CC00	1.0e-65	87.76	15 kDa selenoprotein OS=Cucumis melo OX=3656 GN=LOC103498956 PE=3 SV=1	[more]
A0A6J1JXH9	3.1e-65	86.81	selenoprotein F-like OS=Cucurbita maxima OX=3661 GN=LOC111488731 PE=3 SV=1	[more]

BLAST of Sgr021896.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05720.1	2.6e-56	72.99	selenoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014912	Selenoprotein F/M domain	PFAM	PF08806	Sep15_SelM	coord: 90..145 e-value: 3.4E-19 score: 68.7
IPR038219	Selenoprotein F/M, thioredoxin-like domain superfamily	GENE3D	3.40.30.50		coord: 89..151 e-value: 8.1E-18 score: 66.5
IPR039992	Selenoprotein F/M	PANTHER	PTHR13077	SELENOPROTEIN F	coord: 14..145
None	No IPR available	PANTHER	PTHR13077:SF8	BNAANNG25340D PROTEIN	coord: 14..145
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 73..145

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sgr021896	Sgr021896	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sgr021896.1.exon4	Sgr021896.1.exon4	exon
Sgr021896.1.exon3	Sgr021896.1.exon3	exon
Sgr021896.1.exon2	Sgr021896.1.exon2	exon
Sgr021896.1.exon1	Sgr021896.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Sgr021896.1	cds.Sgr021896.1_4	CDS
cds.Sgr021896.1	cds.Sgr021896.1_3	CDS
cds.Sgr021896.1	cds.Sgr021896.1_2	CDS
cds.Sgr021896.1	cds.Sgr021896.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sgr021896.1	Sgr021896.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005788	endoplasmic reticulum lumen
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016491	oxidoreductase activity