Sgr021044.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr021044.1
Type	mRNA
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	U3 small nucleolar ribonucleoprotein protein IMP3
Location	tig00153639: 388118 .. 394432 (+)
Sequence length	552
RNA-Seq Expression	Sgr021044.1
Synteny	Sgr021044.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAAGCTAAAATTCCACGAGCAGAAGCTGTTGAAGAAGGTCAACTTCTTAGAATGGAAGAGAGAAGGAGGTCACAGAGAAGCCCAGGTCATGCATCGTTATCACGTCACCGGACGGGACGATTACAAAAAGTAACTTCCCTATCTTCTAATTCCTTTGTTTTTCTCCTATTTTCTTCCTTTTTTTGGCGCTTTGGATTTGATTGTGGGGGGAACGAATTTGATTTGATTTAGGTATTCGAGCTTGTGCCGGTCGGTTCAGAAGCTGGTTAACATGTTGAAGAAGATGAACGAGAAAGACCCTTTTCGATTGGAAATGACTGAGAAGCTCCTCGAAAAGCTGTGAGTTCTTCTGCCTTCTTTTTGGTATTTGGTTTTCTTCTCTCTTTCGACTTCTTCACAATATGCGTACAGTTTAATTCCCAAACTTTCAGTGTTGTTTTATAGGGCGGGATTGATTAGGCACAAAATTAAATGTTTAGGGCTTATTAGATATTTTTTAAGTTTATAGACCTACTAAACACAAAATTAAAAGTTTAGAGACCTATTAGATGTTTTTTAAGTTCACCGACCTATTAGATACAAAATTGAAAGCTTAAGTGCCTATTAGACACATTGTAAAGTTAAGGGACATTTGACACAATCCTGAAAGTTTAGGGACAAAACTTGTAATTTACTCTAATAATATATGATTTACATGAAGCTAGTTTCCCATCTATTTGTGTAGAAAAGGATTTTAAAATTTATTTTCTTGTGTGCCTCGTTCCATCTTATTGCCCAACTGACTATTTTCTTTTTAGTTTCCAAAAATGCAGTAAAGTCTTTTAATTTTGGTTCAAGCTATTGAGTTCTTTGTCTTCATGAAATGTATATTGTGATATTTATCTACAATATTAATGATGAGAAGAAAGTTATGTTATGGGCATATTGTAAGACTGCTCATGATGATCACCACCAACATCTCTTCCCTCTATTTAATGCAAGGAAACTGTTGGTATGTTTTTTTTTGTCTAATTTGAAACGAGAAGCTTATTTTCTCCTAGCAAAGAGGCTCTAACAATTCAAGAGCTAGTTATTAGATTGAGATGTTGCTTTTGAGATCAAAAGTTGGTATGCAATATAAAAGATGATTAAAAGGGTAAAATAACTAAGCCAATTCTACATTTTTGTCTCATAGGATAGCTTAACTGACAAAGACTAGTTGGTTTAAAATACCTATGTTGAGAACGAATCCTCTCACCCCAATTGCCTTTGTAAAAAAAAAAAAAAAAAAAAACAAGGAAAATCCACATTCTTTGTAGAGAGTACGAATCAATTACCGATCATGTTTCTCTTATTGCCCGATGTTCTCAGGGTTTCTAGAATGAAAGGTCTAGTTTTTTTTTTTTTTTTTTGAACAAGAAACAAACTCTTCATTGATATAATGAAAAGAAGGAAAATGTTCAAAGAAACAAACTCCAAAAGGAGTGAGAATAAAAGTACTTAGAACTAACTATCAAAGATAAATGCATCCCAATTATTACATAAGTTAGATATCGAGTAATTAACAAAAAGCTTAGATAAAGAGCTCCAATATGAGGCTTTAATCATAGATAGATCAGCTCGCTCGTGCCACACTTTGAACTTATCTTCAAAAACCCTTTGGTTGCGTTTAAACCAAATTTCATAGATAATAGCTTTGATACCATTTACCCAAAGTAATCTAGCCTTAGGAGGGAGAATCGGCCCCGCCCCACAAGAAGTTGAGAAATATTGATACCGGAATCATTGAAGAAAACCCACTGCATCTTGAACTGTTGAAAAAAGAAATTCCAGTAAATAAGTGAATATGAACACCTAAAAAATAAGTGATTCTGATTTTCCACTTCCTGGAAGCAGAGAAAGCAGATAGAGGGCTGAAGATAGTTTGAGGACAGCTTCTTTTGAAGGACTTCAGCTGAATTAACCCCATTTTTTATAAAATCCACAAAAGAACGTTCACTTTTCTGGGACTTTTTTGACTTCCATAAAGCTGAAAGCAAGTCCTTATGCATGGGAGTTGAATCTGCTAGGTGGTTAACCAAGGAATTGACAGTGAATAACCCTGAAGAAGCAAGCTGCCAATTTTTTCTATCATCCCTCTCATTCAAAGTAAGAGCATTCAAAGCCGACAACAACATAGAGAAGTCATTAATCTCTTCTTCCTTTAGATTTCTCGTTATTATTTTGCATGAGTGGCTGCTTTTATCCCAACGATCTGAGACCAAACAATTTGGATAAGCAGCAACCATAAAGAGACGAGGAAACCTTGATTTTAATGAGACTGATCCACACCAGACATCATGCCATAAAAGAACCTGCGTATCATTGCCAATTTTGAAAGAGCAATGTTTTTCCACCCCTTTCCTGTGCTTTGAAATGTTGACCCAAAGACTACGAAGACAAAGATTTCTCTTGCCCAAAGTGTGCCAACCAAACTGTGTTGAACCATAAATACTGACAATTACTTGCTGCCAAAGAGAAGGTGGATCATGGAAGAATCGCCATCCCCACTTTGCAAGAAGAGCCGAATTCATTGATTGCAGACCTCCTAGCCCAAGACCCCCTTTGTCAATTGCTTTTGTGGTCAAATTCCACCTAACAAGATGCTTTAGCTTGCTAGATTCATTTCCTTTCCAAAAGAAGTCTCTCATCTTCTTTTCTATCTCAAGACAAAATTTTCAGAAATAGGAAGCCAAAAGGTGTCCTTCCTTGCATTTCCTCCCAACGGCATGCCTAGATAATTGATGGGCAGAGCCTCCACCTTGCAAAGCAGCTTTGAAGCAACAAGGGAGAGCTTTGAAACTTCCAGATTAGTGCCACTGATGGCTGATTTCTCCCAATTAACTTTTGACCCTGATATCATCTCATATGCTCCAATGGTTTTGAATAAAAAATTCAGCATATTTTCATCATCCTTGTCTTAGCCCTCTTGAATCAATAATTCTAACTCTTGGTCTACCATTGATGAAGATCGAGAACTTGGTATTCCGAATGCAACCCATAATCCATTGAATCCATCTTCTTCCGAATTTCTTAAACTTCATAACTTTTTCAATAAAATCCCAATCCACTCTATCAAAAGCCTTTTCGATATCCAGTTTGATGATCCAACCTTTCTTTTTATTTGATCTATAATATTCATCAACTTCATTTGCAACTAGAGTGCGATCTAAGATTTGCCTTCCTCCAATGAAGGCACTTTGCGAGGGAGATATTGTGGAAGAGATAACTTTCTTTAAACGTTCTGCTAGGACTTTGGCCAGCTACTTGTAAACTGAAGTGGTAAGACTAATTGGACGAAAATCTTTGACGTGACAGTAATATCCTTCTTCTGAATCAAGCAAATGAAGTTTTCTTTAAGACAAGCATTCAAATCCCCATTCTTAAAGAATTCTCTGAATAATCCGCTGAAATCCGGCTTGAAGATATGCCAAAATTTGATTAGAAGTTCAATTGTATACCCGTCTGGACCAGGTGCTTTGTTTTTCCCCAAACCTTTAAGAGCTGACCAAATTTCCTCTTCATCAAACTGTCTTTCTAACCATTCTTTGCTGCTTTCTGATATTGGTCTCCAATATATATCTTTAGGAACAAAATGGTTGCCTTGTTCCTTCTGATAAAGGTTTGAGAAAAACTCTAAAATTTCTGCTTCAATTTCATTGAAATTAATAAGAGTAGACCTATTCACTAATTGCAAACTCGACATAAGCATCTTTCTTTTCTTTGCTGCCAAAAATCTGTGGAAGAAGCTGGAGTTTTCATCCCCCTCCTTTAGCCAATTAATCTTACATTTCTGGATGAGGTCACTTTCTTCTTGAACATTTATTTGCATCAGATTACCTTTCAACAATCTTCTTCTATTGATATCTTCCCCAGTGATTAAACCATCTGCTTCCTTGGAGTCAATTTCTGAAATTTCTGCTATAATGGACTAGGGGTGATCATCGGTTCGGTTTTCTAGATTTTTTCCTAAACCGAGAACCGAACCAATGATCTCGGTTTGCGAGATGTTAAAACCGAACCAATGTCTAGTATGGAGTAAAACTGATTTTCAACCGAACCGGTTGGTTTGGTTTTCTCGGTTCGGTTCCATCGGTTTGAGAACAAAATCATGCACCATCTTTAAAGATAGAGATCTGAAACTTAAAAGAGAGAAAAGATTGAGGAGTATTTGAGATCGAGAGAGGAAGAAGAAGAAGATAAGTGAGGAATGGAAGCGGCACGACTAGGCGACTAAGGAGAGAGGGAAAGAGGCTCGAAAGAGGAGCGGCAGCGGCACTGAGCACGAGGGAAGGAACGACGCGACAGTCGAACTGTGAGGTAGAGGCCGCACGACGGTGCTACTAAGCAAAGAGGATGGGGGAGCATGGGAAGAGGGAGACCAGGCGTGAAGGGGAAGAGGGAGAGAGGGATAGGCATGAAACAAGAGAGGGGCGGCTAGGGTTTGTTACAAAAGACAAACTGGCTTTTTTTCTTTCCTTTTTTCTTTTCTAAAATAAAGTGGAGAGTATGGAGACTAGTGGGCTGGGCTTGGTAAGTTGGATGAATTGGGCTACTAAATGGATAAGTAGGAGTTGGGGTCGGGGGAATATTTTTTCTCTTTTATAATAATAGGATGTCGGTTTTTCTAATTTTTTTAGCTTACAAACTGAACCAAACCGAAGATATTCGGTTTTTCCAATTTTCAAACCGAGGAGTCCAAATTTTTTTGAATAACCGAACCAAACCTGTCGGTTCAGTTCTCGGTTTATCGGTTCGGTCGGTTTTTTGAGCACCCCTAAATGGACTGTTCTTTCAATTTTCTTTGCTTTTCAATATTGGCATTCCATTCCTTTAGATGAATTTTCAAATTCCTCAATTTAGAAGAGATAGAAAACCCTGCCCAACCGTAGGAAGTGTCTTCTAATAATTTCTTCTCTATGAGTTGCACACAATCCTTATTTCTAAGCCAGGAATTGAAGAAACGGAATGGAGTTGGACCCCAAATAAAACTTCCAGCTTCGAAGAGTAAGGAAAAATGGTCTGAAACAAATCTCTCCAATTTGAAACCCTTGAGTTGTCAAAACTATCATCCCAATCTTTGGAAATGAAGAATCTATCAAGTAAAGATTGAGTTGGATTTTCCTCCATACTTGACCAAGATATTTGCCATTTGAGAGAGGGATTTCCAGAATTTCTAATTTTCCAATAAGTGCATTGAACTTCTTCATATTGCGAGTTCTTCTTCCTCCGCTTGACCTTTCTAATGCCCATCTAATAATATTGAAATTCCCTCCAATACACCAAGGACTGTCGACTTAGTTACCCATTTTTCTCCTACTCCTACCATTTTCATAAAACTATCAACATTTCCCATGAGTTATTATCTATGCTATATTTTTTTAATGGTTAAGCCATTTTAAACTTAATATCTTTTGACCTTTTGATTCAAGAACCTAAATATTGTTTTACATCGTCAAAGATTCTGATTGAATAATGGCACAAGAAGTATCAATATTTCTCATGAGTTATCTATACTATATTTTTCTAATCCTAAAGCCATTTTAAACTTGTTAATATTTTTTTGCCCACTGTTTCAAAGACCCAACTCTTTTTTAAATTGTCTGAGACTCTGACTGAATGATGGATGGCACATCAATCTGGCTAAACTGAGCTGAAGAATTATATAGGCAGATGATGTGTAACCATTTCAACTATTTTTTTGATAAGATTAACCATTTCAACTATTATTTGATACATTATCTGATTGCTTACTCATTCTCCCTTGCTTCTCTCCTGAAAACCAATATGACAGGTACAATATTGGTGTGATACCGACCCGACAGAGCTTGAATTTATGTGACCGCTTGTCAGTGTCATCCTTTTGCAGGTAAAAGGAACAACCTGCAGCAAAGAGTTCATTTCCGCTTTGCAATGTTACATATTTTCTACTGCGAATATAACCAATCCTTGAACTCTGAAGATAACAACTCCAAGTACAGACGGTTGTTTACATTGTTATTGCTTTTGCTGCATATTGTTTCTTCTTCAAGCTTGTTTCTCTCTTTCTCTTTGCAGACGGAGGCTATCGACTGTGTTGGTACGTTTGAAGTTTGCCGAGCACTTGAGGGAAGCTGTAACATACATTGAGCAAGGGCACATCCGAGTTGGTCCGGAGACAGTTACTGACCCAGCATTTCTAGTTACAAGGAATATGGAGGACTTTATAACATGGGTAGATTCATCAAAGATAAAGAGAAAGGTTCTACAATACAATGATAAGCTGGATGATTATGATGCCATGAACTGCTGA

mRNA sequence

ATGAGGAAGCTAAAATTCCACGAGCAGAAGCTGTTGAAGAAGGTCAACTTCTTAGAATGGAAGAGAGAAGGAGGTCACAGAGAAGCCCAGGTCATGCATCGTTATCACGTCACCGGACGGGACGATTACAAAAAGTATTCGAGCTTGTGCCGGTCGGTTCAGAAGCTGGTTAACATGTTGAAGAAGATGAACGAGAAAGACCCTTTTCGATTGGAAATGACTGAGAAGCTCCTCGAAAAGCTGTACAATATTGGTGTGATACCGACCCGACAGAGCTTGAATTTATGTGACCGCTTGTCAGTGTCATCCTTTTGCAGACGGAGGCTATCGACTGTGTTGGTACGTTTGAAGTTTGCCGAGCACTTGAGGGAAGCTGTAACATACATTGAGCAAGGGCACATCCGAGTTGGTCCGGAGACAGTTACTGACCCAGCATTTCTAGTTACAAGGAATATGGAGGACTTTATAACATGGGTAGATTCATCAAAGATAAAGAGAAAGGTTCTACAATACAATGATAAGCTGGATGATTATGATGCCATGAACTGCTGA

Coding sequence (CDS)

ATGAGGAAGCTAAAATTCCACGAGCAGAAGCTGTTGAAGAAGGTCAACTTCTTAGAATGGAAGAGAGAAGGAGGTCACAGAGAAGCCCAGGTCATGCATCGTTATCACGTCACCGGACGGGACGATTACAAAAAGTATTCGAGCTTGTGCCGGTCGGTTCAGAAGCTGGTTAACATGTTGAAGAAGATGAACGAGAAAGACCCTTTTCGATTGGAAATGACTGAGAAGCTCCTCGAAAAGCTGTACAATATTGGTGTGATACCGACCCGACAGAGCTTGAATTTATGTGACCGCTTGTCAGTGTCATCCTTTTGCAGACGGAGGCTATCGACTGTGTTGGTACGTTTGAAGTTTGCCGAGCACTTGAGGGAAGCTGTAACATACATTGAGCAAGGGCACATCCGAGTTGGTCCGGAGACAGTTACTGACCCAGCATTTCTAGTTACAAGGAATATGGAGGACTTTATAACATGGGTAGATTCATCAAAGATAAAGAGAAAGGTTCTACAATACAATGATAAGCTGGATGATTATGATGCCATGAACTGCTGA

Protein sequence

MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHVTGRDDYKKYSSLCRSVQKLVNMLKKMNEKDPFRLEMTEKLLEKLYNIGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

Homology

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BLAST of Sgr021044.1 vs. NCBI nr
Match: XP_038880355.1 (U3 small nucleolar ribonucleoprotein protein IMP3 [Benincasa hispida])

HSP 1 Score: 360.5 bits (924), Expect = 8.4e-96
Identity = 177/183 (96.72%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 1   MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHVTGRDDYKKYSSLCRSVQKLVNML 60
           MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYH+TGRDDYKKYSSLCR VQKLVNML
Sbjct: 1   MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVNML 60

Query: 61  KKMNEKDPFRLEMTEKLLEKLYNIGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE 120
           KKMN+KDPFRLEMTEKLLEKLYN+GVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE
Sbjct: 61  KKMNDKDPFRLEMTEKLLEKLYNMGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE 120

Query: 121 HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDA 180
           HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDA
Sbjct: 121 HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDQLDDYDA 180

Query: 181 MNC 184
           +NC
Sbjct: 181 INC 183

[Close]

BLAST of Sgr021044.1 vs. NCBI nr
Match: KAA0041194.1 (U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 [Cucumis melo var. makuwa] >KAA0046137.1 U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 [Cucumis melo var. makuwa] >TYK02423.1 U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 358.2 bits (918), Expect = 4.2e-95
Identity = 176/183 (96.17%), Postives = 181/183 (98.91%), Query Frame = 0


Query: 1   MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHVTGRDDYKKYSSLCRSVQKLVNML 60
           MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYH+TGRDDYKKYSSLCR VQKLV ML
Sbjct: 1   MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTML 60

Query: 61  KKMNEKDPFRLEMTEKLLEKLYNIGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE 120
           KKMNEKDPFRLE+TEKLLEKLYN+GVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE
Sbjct: 61  KKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE 120

Query: 121 HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDA 180
           HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDA
Sbjct: 121 HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDQLDDYDA 180

Query: 181 MNC 184
           +NC
Sbjct: 181 INC 183

[Close]

BLAST of Sgr021044.1 vs. NCBI nr
Match: XP_022155080.1 (U3 small nucleolar ribonucleoprotein protein IMP3 [Momordica charantia])

HSP 1 Score: 358.2 bits (918), Expect = 4.2e-95
Identity = 178/183 (97.27%), Postives = 181/183 (98.91%), Query Frame = 0


Query: 1   MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHVTGRDDYKKYSSLCRSVQKLVNML 60
           MR+LKFHEQKLLKKVNFLEWKREGGHREAQVM RYHVTGRDDYKKYSSLCR VQKLV+ML
Sbjct: 1   MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSML 60

Query: 61  KKMNEKDPFRLEMTEKLLEKLYNIGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE 120
           KKMNEKDPFRLE+TEKLLEKLYNIGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE
Sbjct: 61  KKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE 120

Query: 121 HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDA 180
           HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDA
Sbjct: 121 HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDA 180

Query: 181 MNC 184
           MNC
Sbjct: 181 MNC 183

[Close]

BLAST of Sgr021044.1 vs. NCBI nr
Match: XP_004153543.1 (U3 small nucleolar ribonucleoprotein protein IMP3 [Cucumis sativus] >KGN53772.1 hypothetical protein Csa_015405 [Cucumis sativus])

HSP 1 Score: 357.8 bits (917), Expect = 5.4e-95
Identity = 175/183 (95.63%), Postives = 181/183 (98.91%), Query Frame = 0


Query: 1   MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHVTGRDDYKKYSSLCRSVQKLVNML 60
           MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYH+TGRDDYKKYSSLCR VQKLV ML
Sbjct: 1   MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTML 60

Query: 61  KKMNEKDPFRLEMTEKLLEKLYNIGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE 120
           KKMNEKDPFRLE+TEKLLEKLYN+GVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE
Sbjct: 61  KKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE 120

Query: 121 HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDA 180
           HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRK+LQYND+LDDYDA
Sbjct: 121 HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDA 180

Query: 181 MNC 184
           +NC
Sbjct: 181 INC 183

[Close]

BLAST of Sgr021044.1 vs. NCBI nr
Match: TYK23826.1 (U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 355.9 bits (912), Expect = 2.1e-94
Identity = 175/183 (95.63%), Postives = 180/183 (98.36%), Query Frame = 0


Query: 1   MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHVTGRDDYKKYSSLCRSVQKLVNML 60
           MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYH+TGRDDYKKYSSLCR VQKLV ML
Sbjct: 1   MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTML 60

Query: 61  KKMNEKDPFRLEMTEKLLEKLYNIGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE 120
           KKMNEKDPFR E+TEKLLEKLYN+GVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE
Sbjct: 61  KKMNEKDPFRSELTEKLLEKLYNMGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE 120

Query: 121 HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDA 180
           HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDA
Sbjct: 121 HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDQLDDYDA 180

Query: 181 MNC 184
           +NC
Sbjct: 181 INC 183

[Close]

BLAST of Sgr021044.1 vs. ExPASy Swiss-Prot
Match: Q921Y2 (U3 small nucleolar ribonucleoprotein protein IMP3 OS=Mus musculus OX=10090 GN=Imp3 PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 8.8e-56
Identity = 103/180 (57.22%), Postives = 144/180 (80.00%), Query Frame = 0


Query: 1   MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHVTGRDDYKKYSSLCRSVQKLVNM 60
           +RKLKFHEQKLLK+V+FL W+  +    E +V+ RY +  R++Y +Y+ L R+V++L   
Sbjct: 2   VRKLKFHEQKLLKQVDFLNWEVTDHNLHELRVLRRYRLQRREEYTRYNQLSRAVRELARR 61

Query: 61  LKKMNEKDPFRLEMTEKLLEKLYNIGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFA 120
           L+ + E+DPFR+  +  LL+KLY +G++PTR SL LCD +S SSFCRRRL T+L++L+ A
Sbjct: 62  LRDLPERDPFRVRASAALLDKLYAMGLVPTRGSLELCDSVSASSFCRRRLPTLLLKLRMA 121

Query: 121 EHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD 180
           +HL+ AV ++EQGH+RVGP+ VTDPAFLVTR+MEDF+TWVDSSKIKR VL+YN++ DD+D
Sbjct: 122 QHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSSKIKRHVLEYNEERDDFD 181

[Close]

BLAST of Sgr021044.1 vs. ExPASy Swiss-Prot
Match: Q3T0M3 (U3 small nucleolar ribonucleoprotein protein IMP3 OS=Bos taurus OX=9913 GN=IMP3 PE=2 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.0e-55
Identity = 103/180 (57.22%), Postives = 143/180 (79.44%), Query Frame = 0


Query: 1   MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHVTGRDDYKKYSSLCRSVQKLVNM 60
           +RKLKFHEQKLLK+V+FL W+  +    E +V+ RY +  R+DY +Y+ L R+V++L   
Sbjct: 2   VRKLKFHEQKLLKQVDFLNWEVTDHNLHELRVLRRYRLQRREDYTRYNQLSRAVRELARR 61

Query: 61  LKKMNEKDPFRLEMTEKLLEKLYNIGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFA 120
           L+ + E+DPFR+  +  LL+KLY +G++PTR S  LCD ++ SSFCRRRL TVL++L+ A
Sbjct: 62  LRDLPERDPFRVRSSAALLDKLYALGLVPTRGSQELCDFVTASSFCRRRLPTVLLKLRMA 121

Query: 121 EHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD 180
           +HL+ AV ++EQGH+RVGP+ VTDPAFLVTR+MEDF+TWVDSSKIKR VL+YN++ DD+D
Sbjct: 122 QHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSSKIKRHVLEYNEERDDFD 181

[Close]

BLAST of Sgr021044.1 vs. ExPASy Swiss-Prot
Match: Q9NV31 (U3 small nucleolar ribonucleoprotein protein IMP3 OS=Homo sapiens OX=9606 GN=IMP3 PE=1 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.3e-55
Identity = 103/180 (57.22%), Postives = 143/180 (79.44%), Query Frame = 0


Query: 1   MRKLKFHEQKLLKKVNFLEWK-REGGHREAQVMHRYHVTGRDDYKKYSSLCRSVQKLVNM 60
           +RKLKFHEQKLLK+V+FL W+  +    E +V+ RY +  R+DY +Y+ L R+V++L   
Sbjct: 2   VRKLKFHEQKLLKQVDFLNWEVTDHNLHELRVLRRYRLQRREDYTRYNQLSRAVRELARR 61

Query: 61  LKKMNEKDPFRLEMTEKLLEKLYNIGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFA 120
           L+ + E+D FR+  +  LL+KLY +G++PTR SL LCD ++ SSFCRRRL TVL++L+ A
Sbjct: 62  LRDLPERDQFRVRASAALLDKLYALGLVPTRGSLELCDFVTASSFCRRRLPTVLLKLRMA 121

Query: 121 EHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD 180
           +HL+ AV ++EQGH+RVGP+ VTDPAFLVTR+MEDF+TWVDSSKIKR VL+YN++ DD+D
Sbjct: 122 QHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSSKIKRHVLEYNEERDDFD 181

[Close]

BLAST of Sgr021044.1 vs. ExPASy Swiss-Prot
Match: P32899 (U3 small nucleolar ribonucleoprotein protein IMP3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=IMP3 PE=1 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 2.0e-52
Identity = 95/180 (52.78%), Postives = 140/180 (77.78%), Query Frame = 0


Query: 1   MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHVTGRDDYKKYSSLCRSVQKLVNML 60
           +RKLK HEQKLLKKV+FLEWK++ GHR+ QVM  YH+  R+DY KY+ +C  +++L N L
Sbjct: 2   VRKLKHHEQKLLKKVDFLEWKQDQGHRDTQVMRTYHIQNREDYHKYNRICGDIRRLANKL 61

Query: 61  KKMNEKDPFRLEMTEKLLEKLYNIGVIPTRQSL-NLCDRLSVSSFCRRRLSTVLVRLKFA 120
             +   DPFR +  + LL+KLY +GV+ T+  + +L ++++VS+ CRRRL  ++ RLK A
Sbjct: 62  SLLPPTDPFRRKHEQLLLDKLYAMGVLTTKSKISDLENKVTVSAICRRRLPVIMHRLKMA 121

Query: 121 EHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD 180
           E +++AV +IEQGH+RVGP  + DPA+LVTRNMED++TWVD+SKIK+ +L+Y +++DD+D
Sbjct: 122 ETIQDAVKFIEQGHVRVGPNLINDPAYLVTRNMEDYVTWVDNSKIKKTLLRYRNQIDDFD 181

[Close]

BLAST of Sgr021044.1 vs. ExPASy Swiss-Prot
Match: O13835 (U3 small nucleolar ribonucleoprotein protein imp3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=imp3 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 6.8e-48
Identity = 88/183 (48.09%), Postives = 137/183 (74.86%), Query Frame = 0


Query: 1   MRKLKFHEQKLLKKVNFLEWKR-EGGHREAQVMHRYHVTGRDDYKKYSSLCRSVQKLVNM 60
           MR LK HEQKLL+KV+FL +K  +  HR+  VM RYH++ R++Y+KY+ +C   ++L + 
Sbjct: 1   MRILKHHEQKLLRKVDFLNYKNDDNNHRDVMVMRRYHISKREEYQKYNIICGKFRQLAHR 60

Query: 61  LKKMNEKDPFRLEMTEKLLEKLYNIGVIPTRQSL-NLCDRLSVSSFCRRRLSTVLVRLKF 120
           L  ++  DPFRL+    LLEKL+++G++P++  + ++ ++ +VS+ CRRRL  ++ +L+ 
Sbjct: 61  LSLLDPTDPFRLQYENLLLEKLFDMGILPSKSKMSDIENKANVSAICRRRLPVIMCKLRM 120

Query: 121 AEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDY 180
           ++ + EA   IEQGH+RVGP  +TDPA+LVTR++EDF+TW D+SKIKR + +YNDKLDDY
Sbjct: 121 SQVVSEATRLIEQGHVRVGPHVITDPAYLVTRSLEDFVTWTDTSKIKRTIAKYNDKLDDY 180

Query: 181 DAM 182
           D +
Sbjct: 181 DLL 183

[Close]

BLAST of Sgr021044.1 vs. ExPASy TrEMBL
Match: A0A5D3BRX0 (U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1738G00220 PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.0e-95
Identity = 176/183 (96.17%), Postives = 181/183 (98.91%), Query Frame = 0


Query: 1   MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHVTGRDDYKKYSSLCRSVQKLVNML 60
           MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYH+TGRDDYKKYSSLCR VQKLV ML
Sbjct: 1   MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTML 60

Query: 61  KKMNEKDPFRLEMTEKLLEKLYNIGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE 120
           KKMNEKDPFRLE+TEKLLEKLYN+GVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE
Sbjct: 61  KKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE 120

Query: 121 HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDA 180
           HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDA
Sbjct: 121 HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDQLDDYDA 180

Query: 181 MNC 184
           +NC
Sbjct: 181 INC 183

[Close]

BLAST of Sgr021044.1 vs. ExPASy TrEMBL
Match: A0A6J1DLF0 (U3 small nucleolar ribonucleoprotein protein IMP3 OS=Momordica charantia OX=3673 GN=LOC111022212 PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.0e-95
Identity = 178/183 (97.27%), Postives = 181/183 (98.91%), Query Frame = 0


Query: 1   MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHVTGRDDYKKYSSLCRSVQKLVNML 60
           MR+LKFHEQKLLKKVNFLEWKREGGHREAQVM RYHVTGRDDYKKYSSLCR VQKLV+ML
Sbjct: 1   MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSML 60

Query: 61  KKMNEKDPFRLEMTEKLLEKLYNIGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE 120
           KKMNEKDPFRLE+TEKLLEKLYNIGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE
Sbjct: 61  KKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE 120

Query: 121 HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDA 180
           HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDA
Sbjct: 121 HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDA 180

Query: 181 MNC 184
           MNC
Sbjct: 181 MNC 183

[Close]

BLAST of Sgr021044.1 vs. ExPASy TrEMBL
Match: A0A0A0KZG3 (S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G126420 PE=3 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 2.6e-95
Identity = 175/183 (95.63%), Postives = 181/183 (98.91%), Query Frame = 0


Query: 1   MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHVTGRDDYKKYSSLCRSVQKLVNML 60
           MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYH+TGRDDYKKYSSLCR VQKLV ML
Sbjct: 1   MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTML 60

Query: 61  KKMNEKDPFRLEMTEKLLEKLYNIGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE 120
           KKMNEKDPFRLE+TEKLLEKLYN+GVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE
Sbjct: 61  KKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE 120

Query: 121 HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDA 180
           HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRK+LQYND+LDDYDA
Sbjct: 121 HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKILQYNDQLDDYDA 180

Query: 181 MNC 184
           +NC
Sbjct: 181 INC 183

[Close]

BLAST of Sgr021044.1 vs. ExPASy TrEMBL
Match: A0A5D3DJI4 (U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold162G00290 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.0e-94
Identity = 175/183 (95.63%), Postives = 180/183 (98.36%), Query Frame = 0


Query: 1   MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHVTGRDDYKKYSSLCRSVQKLVNML 60
           MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYH+TGRDDYKKYSSLCR VQKLV ML
Sbjct: 1   MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHITGRDDYKKYSSLCRGVQKLVTML 60

Query: 61  KKMNEKDPFRLEMTEKLLEKLYNIGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE 120
           KKMNEKDPFR E+TEKLLEKLYN+GVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE
Sbjct: 61  KKMNEKDPFRSELTEKLLEKLYNMGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE 120

Query: 121 HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDA 180
           HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDA
Sbjct: 121 HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDQLDDYDA 180

Query: 181 MNC 184
           +NC
Sbjct: 181 INC 183

[Close]

BLAST of Sgr021044.1 vs. ExPASy TrEMBL
Match: A0A6J1GW22 (U3 small nucleolar ribonucleoprotein protein IMP3 OS=Cucurbita moschata OX=3662 GN=LOC111457412 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.0e-94
Identity = 174/183 (95.08%), Postives = 180/183 (98.36%), Query Frame = 0


Query: 1   MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHVTGRDDYKKYSSLCRSVQKLVNML 60
           MRKLKFHEQKLLKKVNFLEWKREGGHRE QVMHRYH+TGRDDYKKYSS+CR VQKLV+ML
Sbjct: 1   MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSML 60

Query: 61  KKMNEKDPFRLEMTEKLLEKLYNIGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE 120
           KKMNEKDPFRLE+TEKLLEKLYN+GVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE
Sbjct: 61  KKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE 120

Query: 121 HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDA 180
           HLREAVTYIEQGHIRVGPETV DPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDD+DA
Sbjct: 121 HLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDA 180

Query: 181 MNC 184
           MNC
Sbjct: 181 MNC 183

[Close]

BLAST of Sgr021044.1 vs. TAIR 10
Match: AT5G15750.1 (Alpha-L RNA-binding motif/Ribosomal protein S4 family protein )

HSP 1 Score: 297.4 bits (760), Expect = 8.1e-81
Identity = 142/181 (78.45%), Postives = 164/181 (90.61%), Query Frame = 0


Query: 1   MRKLKFHEQKLLKKVNFLEWKREGGHREAQVMHRYHVTGRDDYKKYSSLCRSVQKLVNML 60
           MRKLK+HE+KL+KKVNFLEWKREG HRE ++ +RYH+  RDDYKKYS LCR VQKL N++
Sbjct: 1   MRKLKYHEKKLIKKVNFLEWKREGNHRENEITYRYHMGSRDDYKKYSGLCRMVQKLTNIM 60

Query: 61  KKMNEKDPFRLEMTEKLLEKLYNIGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAE 120
           K+M+  DPFR++MT+ LLEKLYN+GVIPTR+SL L +RLSVSSFCRRRLSTVLV LKFAE
Sbjct: 61  KQMDPADPFRIQMTDMLLEKLYNMGVIPTRKSLTLTERLSVSSFCRRRLSTVLVHLKFAE 120

Query: 121 HLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDA 180
           H +EAVTYIEQGH+RVGPET+TDPAFLVTRNMEDFITWVDSSKIKRKVL+YND LDDYD 
Sbjct: 121 HHKEAVTYIEQGHVRVGPETITDPAFLVTRNMEDFITWVDSSKIKRKVLEYNDTLDDYDM 180

Query: 181 M 182
           +
Sbjct: 181 L 181

[Close]

BLAST of Sgr021044.1 vs. TAIR 10
Match: AT5G39850.1 (Ribosomal protein S4 )

HSP 1 Score: 51.2 bits (121), Expect = 1.0e-06
Identity = 34/130 (26.15%), Postives = 66/130 (50.77%), Query Frame = 0


Query: 20  WKREGGHREAQVMHRYHVTGRDDYKKYSSLCRSVQKLVNMLKKMNEKDPFRLEMTEKLLE 79
           +++E    E +++  Y +  + +  +       ++     L  ++EK+P R+   E LL 
Sbjct: 21  YEKERLDAELKLVGEYGLRCKRELWRVQYTLSRIRNAARELLTLDEKNPRRIFEGEALLR 80

Query: 80  KLYNIGVI-PTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGP 139
           ++   G++  T+  L+    L+V +F  RRL T++ +   A+ +  A   I Q HIRVG 
Sbjct: 81  RMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGMAKSIHHARVLIRQRHIRVGR 140

Query: 140 ETVTDPAFLV 149
           + V  P+F+V
Sbjct: 141 QLVNIPSFMV 150

[Close]

BLAST of Sgr021044.1 vs. TAIR 10
Match: AT5G15200.1 (Ribosomal protein S4 )

HSP 1 Score: 50.8 bits (120), Expect = 1.3e-06
Identity = 35/144 (24.31%), Postives = 71/144 (49.31%), Query Frame = 0


Query: 20  WKREGGHREAQVMHRYHVTGRDDYKKYSSLCRSVQKLVNMLKKMNEKDPFRLEMTEKLLE 79
           +++E    E +++  Y +  + +  +       ++     L  ++EK P R+   E LL 
Sbjct: 21  YEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARDLLTLDEKSPRRIFEGEALLR 80

Query: 80  KLYNIGVIPTRQS-LNLCDRLSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGP 139
           ++   G++   Q+ L+    L+V +F  RRL T++ +   A+ +  +   I Q HIRVG 
Sbjct: 81  RMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGMAKSIHHSRVLIRQRHIRVGK 140

Query: 140 ETVTDPAFLVTRNMEDFITWVDSS 163
           + V  P+F+V  + +  I +  +S
Sbjct: 141 QLVNIPSFMVRLDSQKHIDFALTS 164

The following BLAST results are available for this feature:

BLAST of Sgr021044.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880355.1	8.4e-96	96.72	U3 small nucleolar ribonucleoprotein protein IMP3 [Benincasa hispida]	[more]
KAA0041194.1	4.2e-95	96.17	U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 [Cucumis melo var. mak...	[more]
XP_022155080.1	4.2e-95	97.27	U3 small nucleolar ribonucleoprotein protein IMP3 [Momordica charantia]	[more]
XP_004153543.1	5.4e-95	95.63	U3 small nucleolar ribonucleoprotein protein IMP3 [Cucumis sativus] >KGN53772.1 ...	[more]
TYK23826.1	2.1e-94	95.63	U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 [Cucumis melo var. mak...	[more]

BLAST of Sgr021044.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q921Y2	8.8e-56	57.22	U3 small nucleolar ribonucleoprotein protein IMP3 OS=Mus musculus OX=10090 GN=Im...	[more]
Q3T0M3	2.0e-55	57.22	U3 small nucleolar ribonucleoprotein protein IMP3 OS=Bos taurus OX=9913 GN=IMP3 ...	[more]
Q9NV31	3.3e-55	57.22	U3 small nucleolar ribonucleoprotein protein IMP3 OS=Homo sapiens OX=9606 GN=IMP...	[more]
P32899	2.0e-52	52.78	U3 small nucleolar ribonucleoprotein protein IMP3 OS=Saccharomyces cerevisiae (s...	[more]
O13835	6.8e-48	48.09	U3 small nucleolar ribonucleoprotein protein imp3 OS=Schizosaccharomyces pombe (...	[more]

BLAST of Sgr021044.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BRX0	2.0e-95	96.17	U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 OS=Cucumis melo var. m...	[more]
A0A6J1DLF0	2.0e-95	97.27	U3 small nucleolar ribonucleoprotein protein IMP3 OS=Momordica charantia OX=3673...	[more]
A0A0A0KZG3	2.6e-95	95.63	S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G126...	[more]
A0A5D3DJI4	1.0e-94	95.63	U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 OS=Cucumis melo var. m...	[more]
A0A6J1GW22	1.0e-94	95.08	U3 small nucleolar ribonucleoprotein protein IMP3 OS=Cucurbita moschata OX=3662 ...	[more]

BLAST of Sgr021044.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15750.1	8.1e-81	78.45	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein	[more]
AT5G39850.1	1.0e-06	26.15	Ribosomal protein S4	[more]
AT5G15200.1	1.3e-06	24.31	Ribosomal protein S4	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001912	Ribosomal protein S4/S9, N-terminal	SMART	SM01390	Ribosomal_S4_2	coord: 3..106 e-value: 4.0E-27 score: 106.1
IPR001912	Ribosomal protein S4/S9, N-terminal	PFAM	PF00163	Ribosomal_S4	coord: 3..62 e-value: 6.1E-9 score: 36.6
IPR002942	RNA-binding S4 domain	SMART	SM00363	s4_6	coord: 107..170 e-value: 2.3E-8 score: 43.8
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 107..153 e-value: 2.2E-11 score: 43.3
IPR002942	RNA-binding S4 domain	CDD	cd00165	S4	coord: 107..175 e-value: 3.33024E-8 score: 46.4738
IPR036986	RNA-binding S4 domain superfamily	GENE3D	3.10.290.10		coord: 107..182 e-value: 7.1E-8 score: 34.6
IPR022801	Ribosomal protein S4/S9	PANTHER	PTHR11831	30S 40S RIBOSOMAL PROTEIN	coord: 1..181
None	No IPR available	PANTHER	PTHR11831:SF1	U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP3	coord: 1..181
None	No IPR available	PROSITE	PS50889	S4	coord: 107..173 score: 11.77329
None	No IPR available	SUPERFAMILY	55174	Alpha-L RNA-binding motif	coord: 26..175

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sgr021044	Sgr021044	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sgr021044.1.exon1	Sgr021044.1.exon1	exon
Sgr021044.1.exon2	Sgr021044.1.exon2	exon
Sgr021044.1.exon3	Sgr021044.1.exon3	exon
Sgr021044.1.exon4	Sgr021044.1.exon4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Sgr021044.1	cds.Sgr021044.1	CDS
cds.Sgr021044.1	cds.Sgr021044.1_2	CDS
cds.Sgr021044.1	cds.Sgr021044.1_3	CDS
cds.Sgr021044.1	cds.Sgr021044.1_4	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sgr021044.1	Sgr021044.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0034457	Mpp10 complex
cellular_component	GO:0005840	ribosome
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0030515	snoRNA binding
molecular_function	GO:0003735	structural constituent of ribosome