Sgr019759.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr019759.1
Type	mRNA
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Nuclear transcription factor Y subunit B
Location	tig00153403: 1108154 .. 1108465 (+)
Sequence length	312
RNA-Seq Expression	Sgr019759.1
Synteny	Sgr019759.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCAAATTCTGCCGCCGAACGCCAAAATCTCGAAAGAAGCGAAAGAAACGATGCAGGAATGTGTGTCAGAGTTCATCAGCTTCGTCACCGGCGAAGCCTCCGACAAGTGCCATAAAGAGAAGAGGAAGACCGTCAATGGCGACGACATTTGCTGCGCCTTGGCCACCCTCGGCTTCGACGATTATGCTGAGCCATTGAGAAGGTATCTGCTTAAGTTTCGGGAAATGGAAGGAGAGAGAGCTCAACAGAGCAAGGGCTGCTGCAATGACATCATGATGCAAGAGAGAGAGAGAGAGAGAGATCGATGA

mRNA sequence

ATGAAGCAAATTCTGCCGCCGAACGCCAAAATCTCGAAAGAAGCGAAAGAAACGATGCAGGAATGTGTGTCAGAGTTCATCAGCTTCGTCACCGGCGAAGCCTCCGACAAGTGCCATAAAGAGAAGAGGAAGACCGTCAATGGCGACGACATTTGCTGCGCCTTGGCCACCCTCGGCTTCGACGATTATGCTGAGCCATTGAGAAGGTATCTGCTTAAGTTTCGGGAAATGGAAGGAGAGAGAGCTCAACAGAGCAAGGGCTGCTGCAATGACATCATGATGCAAGAGAGAGAGAGAGAGAGAGATCGATGA

Coding sequence (CDS)

ATGAAGCAAATTCTGCCGCCGAACGCCAAAATCTCGAAAGAAGCGAAAGAAACGATGCAGGAATGTGTGTCAGAGTTCATCAGCTTCGTCACCGGCGAAGCCTCCGACAAGTGCCATAAAGAGAAGAGGAAGACCGTCAATGGCGACGACATTTGCTGCGCCTTGGCCACCCTCGGCTTCGACGATTATGCTGAGCCATTGAGAAGGTATCTGCTTAAGTTTCGGGAAATGGAAGGAGAGAGAGCTCAACAGAGCAAGGGCTGCTGCAATGACATCATGATGCAAGAGAGAGAGAGAGAGAGAGATCGATGA

Protein sequence

MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGFDDYAEPLRRYLLKFREMEGERAQQSKGCCNDIMMQERERERDR

Homology

[Close]

BLAST of Sgr019759.1 vs. NCBI nr
Match: XP_038876756.1 (nuclear transcription factor Y subunit B-1-like [Benincasa hispida])

HSP 1 Score: 184.9 bits (468), Expect = 3.5e-43
Identity = 86/91 (94.51%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1   MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 60
           MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF
Sbjct: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120

Query: 61  DDYAEPLRRYLLKFREMEGERAQQSKGCCND 92
           DDYAEPLRRYL+++REMEGERAQQ+KGCCN+
Sbjct: 121 DDYAEPLRRYLVRYREMEGERAQQNKGCCNN 151

[Close]

BLAST of Sgr019759.1 vs. NCBI nr
Match: XP_008451614.1 (PREDICTED: nuclear transcription factor Y subunit B-1 [Cucumis melo])

HSP 1 Score: 183.7 bits (465), Expect = 7.9e-43
Identity = 85/91 (93.41%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1   MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 60
           MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF
Sbjct: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120

Query: 61  DDYAEPLRRYLLKFREMEGERAQQSKGCCND 92
           DDYAEPLRRYL+++R+MEGERAQQ+KGCCN+
Sbjct: 121 DDYAEPLRRYLVRYRDMEGERAQQNKGCCNN 151

[Close]

BLAST of Sgr019759.1 vs. NCBI nr
Match: XP_011659350.1 (nuclear transcription factor Y subunit B-5 [Cucumis sativus])

HSP 1 Score: 183.7 bits (465), Expect = 7.9e-43
Identity = 85/91 (93.41%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1   MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 60
           MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF
Sbjct: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120

Query: 61  DDYAEPLRRYLLKFREMEGERAQQSKGCCND 92
           DDYAEPLRRYL+++R+MEGERAQQ+KGCCN+
Sbjct: 121 DDYAEPLRRYLVRYRDMEGERAQQNKGCCNN 151

[Close]

BLAST of Sgr019759.1 vs. NCBI nr
Match: XP_022953161.1 (nuclear transcription factor Y subunit B-1-like [Cucurbita moschata])

HSP 1 Score: 183.7 bits (465), Expect = 7.9e-43
Identity = 85/91 (93.41%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1   MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 60
           MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF
Sbjct: 62  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 121

Query: 61  DDYAEPLRRYLLKFREMEGERAQQSKGCCND 92
           DDYAEPLRRYL+++RE+EGERAQQ+KGCCN+
Sbjct: 122 DDYAEPLRRYLIRYREIEGERAQQNKGCCNN 152

[Close]

BLAST of Sgr019759.1 vs. NCBI nr
Match: KAG6575846.1 (Nuclear transcription factor Y subunit B-5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 183.7 bits (465), Expect = 7.9e-43
Identity = 85/91 (93.41%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1   MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 60
           MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF
Sbjct: 64  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 123

Query: 61  DDYAEPLRRYLLKFREMEGERAQQSKGCCND 92
           DDYAEPLRRYL+++RE+EGERAQQ+KGCCN+
Sbjct: 124 DDYAEPLRRYLIRYREIEGERAQQNKGCCNN 154

[Close]

BLAST of Sgr019759.1 vs. ExPASy Swiss-Prot
Match: O82248 (Nuclear transcription factor Y subunit B-5 OS=Arabidopsis thaliana OX=3702 GN=NFYB5 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 3.8e-32
Identity = 65/81 (80.25%), Postives = 73/81 (90.12%), Query Frame = 0


Query: 1   MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 60
           MK ILP NAK+SKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDIC A+A LGF
Sbjct: 65  MKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWAMANLGF 124

Query: 61  DDYAEPLRRYLLKFREMEGER 82
           DDYA  L++YL ++R +EGE+
Sbjct: 125 DDYAAQLKKYLHRYRVLEGEK 145

[Close]

BLAST of Sgr019759.1 vs. ExPASy Swiss-Prot
Match: Q9FGJ3 (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NFYB2 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 9.4e-31
Identity = 63/81 (77.78%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 1   MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 60
           MK+ LP NAKISK+AKETMQECVSEFISFVTGEASDKC KEKRKT+NGDD+  A+ TLGF
Sbjct: 41  MKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGF 100

Query: 61  DDYAEPLRRYLLKFREMEGER 82
           +DY EPL+ YL +FRE+EGER
Sbjct: 101 EDYVEPLKVYLQRFREIEGER 121

[Close]

BLAST of Sgr019759.1 vs. ExPASy Swiss-Prot
Match: Q75IZ7 (Nuclear transcription factor Y subunit B-8 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB8 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 9.4e-31
Identity = 62/85 (72.94%), Postives = 74/85 (87.06%), Query Frame = 0


Query: 1   MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 60
           MK+ LP NAKISK+AKET+QECVSEFISF+TGEASDKC +EKRKT+NGDD+  A+ TLGF
Sbjct: 38  MKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGF 97

Query: 61  DDYAEPLRRYLLKFREMEGERAQQS 86
           +DY +PL+ YL KFRE+EGERA  S
Sbjct: 98  EDYVDPLKHYLHKFREIEGERAAAS 122

[Close]

BLAST of Sgr019759.1 vs. ExPASy Swiss-Prot
Match: Q69J40 (Nuclear transcription factor Y subunit B-10 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB10 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 6.1e-30
Identity = 61/87 (70.11%), Postives = 75/87 (86.21%), Query Frame = 0


Query: 1   MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 60
           MK+ LP NAKISK+AKET+QECVSEFISF+TGEASDKC +EKRKT+NGDD+  A+ TLGF
Sbjct: 36  MKRALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGF 95

Query: 61  DDYAEPLRRYLLKFREMEGERAQQSKG 88
           +DY +PL+ YL KFRE+EGE+A  + G
Sbjct: 96  EDYIDPLKLYLHKFRELEGEKAIGAAG 122

[Close]

BLAST of Sgr019759.1 vs. ExPASy Swiss-Prot
Match: O23310 (Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NFYB3 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.8e-29
Identity = 59/81 (72.84%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 1   MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 60
           MK+ LP NAKISK+AKET+QECVSEFISF+TGEASDKC +EKRKT+NGDD+  A+ TLGF
Sbjct: 35  MKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGF 94

Query: 61  DDYAEPLRRYLLKFREMEGER 82
           +DY EPL+ YL K+RE+EGE+
Sbjct: 95  EDYVEPLKVYLQKYREVEGEK 115

[Close]

BLAST of Sgr019759.1 vs. ExPASy TrEMBL
Match: A0A6J1JM11 (nuclear transcription factor Y subunit B-1 OS=Cucurbita maxima OX=3661 GN=LOC111488106 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.8e-43
Identity = 85/91 (93.41%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1   MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 60
           MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF
Sbjct: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120

Query: 61  DDYAEPLRRYLLKFREMEGERAQQSKGCCND 92
           DDYAEPLRRYL+++RE+EGERAQQ+KGCCN+
Sbjct: 121 DDYAEPLRRYLIRYREIEGERAQQNKGCCNN 151

[Close]

BLAST of Sgr019759.1 vs. ExPASy TrEMBL
Match: A0A5A7VLD2 (Nuclear transcription factor Y subunit B-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G002260 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.8e-43
Identity = 85/91 (93.41%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1   MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 60
           MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF
Sbjct: 55  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 114

Query: 61  DDYAEPLRRYLLKFREMEGERAQQSKGCCND 92
           DDYAEPLRRYL+++R+MEGERAQQ+KGCCN+
Sbjct: 115 DDYAEPLRRYLVRYRDMEGERAQQNKGCCNN 145

[Close]

BLAST of Sgr019759.1 vs. ExPASy TrEMBL
Match: A0A0A0K954 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G395250 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.8e-43
Identity = 85/91 (93.41%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1   MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 60
           MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF
Sbjct: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120

Query: 61  DDYAEPLRRYLLKFREMEGERAQQSKGCCND 92
           DDYAEPLRRYL+++R+MEGERAQQ+KGCCN+
Sbjct: 121 DDYAEPLRRYLVRYRDMEGERAQQNKGCCNN 151

[Close]

BLAST of Sgr019759.1 vs. ExPASy TrEMBL
Match: A0A6J1GM85 (nuclear transcription factor Y subunit B-1-like OS=Cucurbita moschata OX=3662 GN=LOC111455784 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.8e-43
Identity = 85/91 (93.41%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1   MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 60
           MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF
Sbjct: 62  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 121

Query: 61  DDYAEPLRRYLLKFREMEGERAQQSKGCCND 92
           DDYAEPLRRYL+++RE+EGERAQQ+KGCCN+
Sbjct: 122 DDYAEPLRRYLIRYREIEGERAQQNKGCCNN 152

[Close]

BLAST of Sgr019759.1 vs. ExPASy TrEMBL
Match: A0A1S3BT19 (nuclear transcription factor Y subunit B-1 OS=Cucumis melo OX=3656 GN=LOC103492848 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.8e-43
Identity = 85/91 (93.41%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1   MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 60
           MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF
Sbjct: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120

Query: 61  DDYAEPLRRYLLKFREMEGERAQQSKGCCND 92
           DDYAEPLRRYL+++R+MEGERAQQ+KGCCN+
Sbjct: 121 DDYAEPLRRYLVRYRDMEGERAQQNKGCCNN 151

[Close]

BLAST of Sgr019759.1 vs. TAIR 10
Match: AT2G47810.1 (nuclear factor Y, subunit B5 )

HSP 1 Score: 138.7 bits (348), Expect = 2.7e-33
Identity = 65/81 (80.25%), Postives = 73/81 (90.12%), Query Frame = 0


Query: 1   MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 60
           MK ILP NAK+SKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDIC A+A LGF
Sbjct: 65  MKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWAMANLGF 124

Query: 61  DDYAEPLRRYLLKFREMEGER 82
           DDYA  L++YL ++R +EGE+
Sbjct: 125 DDYAAQLKKYLHRYRVLEGEK 145

[Close]

BLAST of Sgr019759.1 vs. TAIR 10
Match: AT5G47640.1 (nuclear factor Y, subunit B2 )

HSP 1 Score: 134.0 bits (336), Expect = 6.7e-32
Identity = 63/81 (77.78%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 1   MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 60
           MK+ LP NAKISK+AKETMQECVSEFISFVTGEASDKC KEKRKT+NGDD+  A+ TLGF
Sbjct: 41  MKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGF 100

Query: 61  DDYAEPLRRYLLKFREMEGER 82
           +DY EPL+ YL +FRE+EGER
Sbjct: 101 EDYVEPLKVYLQRFREIEGER 121

[Close]

BLAST of Sgr019759.1 vs. TAIR 10
Match: AT4G14540.1 (nuclear factor Y, subunit B3 )

HSP 1 Score: 129.8 bits (325), Expect = 1.3e-30
Identity = 59/81 (72.84%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 1   MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 60
           MK+ LP NAKISK+AKET+QECVSEFISF+TGEASDKC +EKRKT+NGDD+  A+ TLGF
Sbjct: 35  MKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGF 94

Query: 61  DDYAEPLRRYLLKFREMEGER 82
           +DY EPL+ YL K+RE+EGE+
Sbjct: 95  EDYVEPLKVYLQKYREVEGEK 115

[Close]

BLAST of Sgr019759.1 vs. TAIR 10
Match: AT2G38880.2 (nuclear factor Y, subunit B1 )

HSP 1 Score: 127.1 bits (318), Expect = 8.2e-30
Identity = 58/86 (67.44%), Postives = 71/86 (82.56%), Query Frame = 0


Query: 1   MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 60
           MK+ LPPN KI K+AK+T+QECVSEFISF+T EASDKC KEKRKTVNGDD+  A+ATLGF
Sbjct: 35  MKKALPPNGKIGKDAKDTVQECVSEFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGF 94

Query: 61  DDYAEPLRRYLLKFREMEGERAQQSK 87
           +DY EPL+ YL ++RE+EG+     K
Sbjct: 95  EDYLEPLKIYLARYRELEGDNKGSGK 120

[Close]

BLAST of Sgr019759.1 vs. TAIR 10
Match: AT2G38880.3 (nuclear factor Y, subunit B1 )

HSP 1 Score: 127.1 bits (318), Expect = 8.2e-30
Identity = 58/86 (67.44%), Postives = 71/86 (82.56%), Query Frame = 0


Query: 1   MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 60
           MK+ LPPN KI K+AK+T+QECVSEFISF+T EASDKC KEKRKTVNGDD+  A+ATLGF
Sbjct: 35  MKKALPPNGKIGKDAKDTVQECVSEFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGF 94

Query: 61  DDYAEPLRRYLLKFREMEGERAQQSK 87
           +DY EPL+ YL ++RE+EG+     K
Sbjct: 95  EDYLEPLKIYLARYRELEGDNKGSGK 120

The following BLAST results are available for this feature:

BLAST of Sgr019759.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876756.1	3.5e-43	94.51	nuclear transcription factor Y subunit B-1-like [Benincasa hispida]	[more]
XP_008451614.1	7.9e-43	93.41	PREDICTED: nuclear transcription factor Y subunit B-1 [Cucumis melo]	[more]
XP_011659350.1	7.9e-43	93.41	nuclear transcription factor Y subunit B-5 [Cucumis sativus]	[more]
XP_022953161.1	7.9e-43	93.41	nuclear transcription factor Y subunit B-1-like [Cucurbita moschata]	[more]
KAG6575846.1	7.9e-43	93.41	Nuclear transcription factor Y subunit B-5, partial [Cucurbita argyrosperma subs...	[more]

BLAST of Sgr019759.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82248	3.8e-32	80.25	Nuclear transcription factor Y subunit B-5 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9FGJ3	9.4e-31	77.78	Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q75IZ7	9.4e-31	72.94	Nuclear transcription factor Y subunit B-8 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q69J40	6.1e-30	70.11	Nuclear transcription factor Y subunit B-10 OS=Oryza sativa subsp. japonica OX=3...	[more]
O23310	1.8e-29	72.84	Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Sgr019759.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JM11	3.8e-43	93.41	nuclear transcription factor Y subunit B-1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A5A7VLD2	3.8e-43	93.41	Nuclear transcription factor Y subunit B-1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0K954	3.8e-43	93.41	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G3952...	[more]
A0A6J1GM85	3.8e-43	93.41	nuclear transcription factor Y subunit B-1-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A1S3BT19	3.8e-43	93.41	nuclear transcription factor Y subunit B-1 OS=Cucumis melo OX=3656 GN=LOC1034928...	[more]

BLAST of Sgr019759.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47810.1	2.7e-33	80.25	nuclear factor Y, subunit B5	[more]
AT5G47640.1	6.7e-32	77.78	nuclear factor Y, subunit B2	[more]
AT4G14540.1	1.3e-30	72.84	nuclear factor Y, subunit B3	[more]
AT2G38880.2	8.2e-30	67.44	nuclear factor Y, subunit B1	[more]
AT2G38880.3	8.2e-30	67.44	nuclear factor Y, subunit B1	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00615	CCAATSUBUNTA	coord: 19..37 score: 51.32 coord: 38..56 score: 34.21 coord: 57..75 score: 36.84
None	No IPR available	PANTHER	PTHR11064:SF106	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-5	coord: 1..97
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 1..55 e-value: 1.9E-20 score: 72.9
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 1..103 e-value: 2.4E-36 score: 126.6
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 1..88
IPR027113	Transcription factor NFYB/HAP3	PANTHER	PTHR11064	CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED	coord: 1..97
IPR003956	Transcription factor, NFYB/HAP3, conserved site	PROSITE	PS00685	NFYB_HAP3	coord: 22..38

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sgr019759	Sgr019759	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sgr019759.1.exon1	Sgr019759.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Sgr019759.1	cds.Sgr019759.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sgr019759.1	Sgr019759.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding