Sgr019727.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr019727.1
Type	mRNA
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Histone H2A
Location	tig00153403: 791967 .. 795684 (+)
Sequence length	920
RNA-Seq Expression	Sgr019727.1
Synteny	Sgr019727.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCCACCGACGCGCCGGCTAAGGGCGGCAGAGGCAAGAAATCCGCCGCCAAGTCCGTCTCCAGGTCTCACAAGGCCGGGCTTCAATTTCCCGTCGGCCGAGTCGCTAGGTACCTCAAGAAGGGCCGTTATGCTCAGCGTGTCGGCTCCGGCTCTCCGGTCTACCTCTCCGCCGTCCTTGAATATCTCGCCGCTGAGGTTTGAATTGTTTGATTCACTTTGTTTTCCTCTGCTGTGTTTGATTGTTCGGTTCTTAATGTTCTGATTGTAGAATTTTGTATTGGTTTAGGTTTTGGAGTTGGCTGGTAATGCTGCGAGGGACAACAAGAAGACTAGAATCATCCCGAGGCACATTCAACTTGCGGTGAGGAACGACGAGGAATTGAGCAAGCTTTTGGGATCGGTTACGATTGCCAGTGGAGGAGTGATGCCGAAAATTCATCAGTCTCTTTTGCCAAAGAAGGCCGGAAAGGAGAAAGGCGAAATCGGATCGGTGTCTCAGGAATTTTAAATTACAGAAGAAATCACCATTAGTGAAAAGAAAAAGAAAGTTAGGTTACCTTAGAATATTAGCCTCAGGGAATCCTTCTTCTGGTATATAAATTGGGAAACGAATTTCGCTTAGATTAGCTTCCGTCTTCGTCGATCAATTATTCTATTTAGTGTAAATGCCAATGAAGTTTGCCTCTTATTTGAATCAAAAGAAACAGAGTTGAGTTCTCATTTTCCTGGAATCTGCAAATTTCCTATCAGCCAATCAGAAATAAGAAGTAAATTCCAGAAATCTTAATTATTTACATAGTTGGCCCGATTTTTTTAAATTTTATTATTATTTCTAAAAATGTTAAATATGTTGTCAATTCGTTTCTTTTCCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATCCATTTTGTCCATCACTGTCAATTTCAGATTCTCTAGGGTTCCGATCATCCGCCGGAAAATAATATACAATGACGTCTGCTTAGACCAAGGGCGGCAGAGGAAAACCCAAGGCCGCGAAGTCTGTTTCGCGGTCACAGAAGGCCGGTCTTCAGTTCCCCGTCGAGCGTGTCGGCGCCGGTGCTCCCGTCTACCTTTCCGCCGTCCTTGAATATATCGCCGCTGATGTTAGTGCTCGATCTTCTTATCGGATCTTTTTACTTGTATTCTGAATTTCTGATCTGTTTGTCTATGAAGTGTTTGCGTCTGAATGCTATGAATCAGAATAATGTAGTGCAGTCTTCTGATCACTGAATTGGAATAATTGTTTCTGATTTAGTTGTGTTTCTTCTGCTTTTGCTCTGGAATCGATTCGTAGAAGAGGAATCCGATTTGTTTTTTGGTATTTAGAAGCAAACTGGGCTTTGGGGTTTAGTAAAAGAGTTTTGGGCTGGGCTTGTGGAAGGTTTGTAACAGATATGAGAGAGAGAGAGAGAGTAAACTAAAATCATATCTATTAAGTTAATTAAAAATACTTAGGTTAAATTATAAAATTTAGTCCTTTTAATTTAGGCTGATTTTCAATTTGGATCCTATAGTTTCCTATTGTTTTAGCTTAACTTCAATTGATTCTTATAGTTTTAAAAGTTTTAATTTGATTTTTATGATTTGGTCAAATCTTACAAATCGTCTTTGTTGTTATTCATATGGTTTCAAATTCTTAGTGTGAGTTTGACATGCCTTTACTTATGAATAATTAAAAGTGTTTTTTAAAAATTTATAGTATTTGAATAAAATTTTAAAAAGTATTTTTGATTAATTAAAAGTGCTTTTTAAAATTTCTAATAATGAAGTGTGGTTTGAAAAATTTTAATAATAGATAAAAAGCACTTATAGAGCTTTTAAAAAAAACATTTAATTAATTTTATTTCAAAAGTGTTTATATAATAAGTGCTTCTCTTAAAAATATATATTTTTTTAAAAATACGTGCCAAACACATACTTAATCTCGAAGAATAAAGAATTTTAAAACCCAATACTCTTATCTATTGCAAATGGTTTCAAAATTCTTAATCCAGAGGAACGAAACATATGTGATGTGAGAATCCTACTAAACAATGTATAAGAAATTAATTGTAAAGATTAAAGTAATTTTTTTATACAAAATTTGTATGTTAAAATAAAATATTTGAAAATTTTCTATTAAAAAAAAAGATTAAATATATCAAATGGTTTCTAATCTTTTAAGTAATTTTTAATTTGGTCCTTAATTTTTTAAAATTCTCAATTTTACTCTTAATGTATAGAAAAATTCTCAATTAGGTTATTTTATAAAAGAATTGTTAAAATTTGTTAACAAAAAGTTGATATCATCAAATTATTATTTTATTAATATATTTGGACACGGAAATATATCATTTGGATGTTATTTGACACATGAAATCCAATTTGCTAAAAAAAAAATCCAACTTGCTAATTAACAAAATTTATTTCTTTCAAGCTATATTTAAAGTGACATGTCTATGTGTTCAAATATGTTAACAAAATAATAATTTAATGATACAACAATTTTTAATTAACAAATTTTAATATATTTTTTTTATAGAAAAATTTAATTGAGAATTTTTAATATATTAAAAATAAAAGTAAAAATTTTAAAAGATTAAAAATCAAATTGAGAAAAATTGAAAAGATTAAGAACTAATAAAAAAAAAAAAAAATTACGAAGATAGGTCAAAGTTGTTTTTCCCATCAGTCCGTCGAGAAAAAGCTCCTCGTACGCCCAACCCAAGTTGGAGATCTCTCCTCCGCCGGTATTTCACTTATTTCGCCGGAAATCTGCCACCGTTCGGCCGAAGTATCTAATCAGTCGGTAAAGTTTCGTTGTTCTTCGAAGTTAATAACATTTTTAGTTATTTCGCTTATTCTGGGTCATTCCATTGCGTTTTTCCAAATCTTCCTCTTACTGTGCAAGTTTCAGATCATCGAGCAAAATTCTTCCTTTCAAAGTTCAAGCAATTTCTTTTTTCTTATTCATTTTCTTCCAGACAGGGAGAGTCCCCAACCTGTTTGTAGAAATTACTGAATATGGATTCCGTTTCAGACGTGTTTAATATATACCTCTAAGTTTTAGAAGTGACATGTCCATGATCTATCACGTAAGTATTCTATCGATAGTGTTAATAAAGTAACTAAATATAAATGTAATCCAAAATTTAGAGACAACTAAATTTTTTTTAAAAAATTAGAAACTAAATAGTCATAATCAGCTTCTAATTTATAATTATGTATGGTTTTTCATTCTTTTGGTAATGGCCTTTTTGAAGGTCAATGCCTCCACATTTGAAAACAGAGTATTGGTTGTTTGTTTGTGGCAGTTAAGAAGTACACAAATGATGATATGTCTCAAGGACTTGGTGCCAGCAGCCCAGAACAATGTGAATGCACAGTTCATAGTTTTGGAGAAAGGGAAGGCAACAGTTGAAGGGCAGAACAAGACATGCCTATCGCTGGTGGCCGATGAAACAGCAGCAGTTCACTTCCAGCTATGGGGAGATGAGTGCGACGCGGTCGAGCCGAGCGACATTATCCGCTTGACGAATGGGATATTCTCTTACAGCCGAAACAACCTGGTGCTGAGGGCAGGGAAGAGGGGGAAGATAGGGAAGGTGGGAGAGTTCAACATGGTGTTTGTGGAGATGCCCAATATGAGCGAGATCCATTGGGTTCCCGACGCGACTGACTCGAAGAA

mRNA sequence

ATGAGTTCCACCGACGCGCCGGCTAAGGGCGGCAGAGGCAAGAAATCCGCCGCCAAGTCCGTCTCCAGGTCTCACAAGGCCGGGCTTCAATTTCCCGTCGGCCGAGTCGCTAGGTACCTCAAGAAGGGCCGTTATGCTCAGCGTGTCGGCTCCGGCTCTCCGGTCTACCTCTCCGCCGTCCTTGAATATCTCGCCGCTGAGGTTTTGGAGTTGGCTGGTAATGCTGCGAGGGACAACAAGAAGACTAGAATCATCCCGAGGCACATTCAACTTGCGGTGAGGAACGACGAGGAATTGAGCAAGCTTTTGGGATCGGTTACGATTGCCAGTGGAGGAGTGATGCCGAAAATTCATCAGTCTCTTTTGCCAAAGAAGGCCGGAAAGGAGAAAGGCGAAATCGGATCGACCAAGGGCGGCAGAGGAAAACCCAAGGCCGCGAAGTCTGTTTCGCGGTCACAGAAGGCCGGTCTTCAGTTCCCCGTCGAGCGTGTCGGCGCCGGTGCTCCCGTCTACCTTTCCGCCGTCCTTGAATATATCGCCGCTGATTTAAGAAGTACACAAATGATGATATGTCTCAAGGACTTGGTGCCAGCAGCCCAGAACAATGTGAATGCACAGTTCATAGTTTTGGAGAAAGGGAAGGCAACAGTTGAAGGGCAGAACAAGACATGCCTATCGCTGGTGGCCGATGAAACAGCAGCAGTTCACTTCCAGCTATGGGGAGATGAGTGCGACGCGGTCGAGCCGAGCGACATTATCCGCTTGACGAATGGGATATTCTCTTACAGCCGAAACAACCTGGTGCTGAGGGCAGGGAAGAGGGGGAAGATAGGGAAGGTGGGAGAGTTCAACATGGTGTTTGTGGAGATGCCCAATATGAGCGAGATCCATTGGGTTCCCGACGCGACTGACTCGAAGAA

Coding sequence (CDS)

ATGAGTTCCACCGACGCGCCGGCTAAGGGCGGCAGAGGCAAGAAATCCGCCGCCAAGTCCGTCTCCAGGTCTCACAAGGCCGGGCTTCAATTTCCCGTCGGCCGAGTCGCTAGGTACCTCAAGAAGGGCCGTTATGCTCAGCGTGTCGGCTCCGGCTCTCCGGTCTACCTCTCCGCCGTCCTTGAATATCTCGCCGCTGAGGTTTTGGAGTTGGCTGGTAATGCTGCGAGGGACAACAAGAAGACTAGAATCATCCCGAGGCACATTCAACTTGCGGTGAGGAACGACGAGGAATTGAGCAAGCTTTTGGGATCGGTTACGATTGCCAGTGGAGGAGTGATGCCGAAAATTCATCAGTCTCTTTTGCCAAAGAAGGCCGGAAAGGAGAAAGGCGAAATCGGATCGACCAAGGGCGGCAGAGGAAAACCCAAGGCCGCGAAGTCTGTTTCGCGGTCACAGAAGGCCGGTCTTCAGTTCCCCGTCGAGCGTGTCGGCGCCGGTGCTCCCGTCTACCTTTCCGCCGTCCTTGAATATATCGCCGCTGATTTAAGAAGTACACAAATGATGATATGTCTCAAGGACTTGGTGCCAGCAGCCCAGAACAATGTGAATGCACAGTTCATAGTTTTGGAGAAAGGGAAGGCAACAGTTGAAGGGCAGAACAAGACATGCCTATCGCTGGTGGCCGATGAAACAGCAGCAGTTCACTTCCAGCTATGGGGAGATGAGTGCGACGCGGTCGAGCCGAGCGACATTATCCGCTTGACGAATGGGATATTCTCTTACAGCCGAAACAACCTGGTGCTGAGGGCAGGGAAGAGGGGGAAGATAGGGAAGGTGGGAGAGTTCAACATGGTGTTTGTGGAGATGCCCAATATGAGCGAGATCCATTGGGTTCCCGACGCGACTGACTCGAAGAA

Protein sequence

MSSTDAPAKGGRGKKSAAKSVSRSHKAGLQFPVGRVARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKAGKEKGEIGSTKGGRGKPKAAKSVSRSQKAGLQFPVERVGAGAPVYLSAVLEYIAADLRSTQMMICLKDLVPAAQNNVNAQFIVLEKGKATVEGQNKTCLSLVADETAAVHFQLWGDECDAVEPSDIIRLTNGIFSYSRNNLVLRAGKRGKIGKVGEFNMVFVEMPNMSEIHWVPDATDSKX

Homology

[Close]

BLAST of Sgr019727.1 vs. NCBI nr
Match: KAG8389410.1 (hypothetical protein BUALT_Bualt02G0226300 [Buddleja alternifolia])

HSP 1 Score: 435.3 bits (1118), Expect = 4.5e-118
Identity = 239/333 (71.77%), Postives = 264/333 (79.28%), Query Frame = 0


Query: 3   STDAPAKGGRGKKSAAKSVSRSHKAGLQFPVGRVARYLKKGRYAQRVGSGSPVYLSAVLE 62
           +T      GRGK   +K+VSRS KAGLQFPVGRVAR+LKKGRYAQRVGSGSPVYLSAVLE
Sbjct: 5   TTATSTAAGRGKPK-SKAVSRSSKAGLQFPVGRVARFLKKGRYAQRVGSGSPVYLSAVLE 64

Query: 63  YLAAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLL 122
           YLAAEVLELAGNAARDNKK RI+PRHIQLAVRND+E SKLLGSVTIA+GGV+P IHQ+LL
Sbjct: 65  YLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDDEFSKLLGSVTIANGGVLPNIHQTLL 124

Query: 123 PKK--AGKEKGEIGS-------------TKGGRGKPKAAKSVSRSQKAGLQFPV------ 182
           PKK  AGK K EIGS             TKGGRGKPKA+KSV RS KAGLQFPV      
Sbjct: 125 PKKTGAGKGKSEIGSIRIKVSNAAAAATTKGGRGKPKASKSVFRSSKAGLQFPVGRIARF 184

Query: 183 -------ERVGAGAPVYLSAVLEYIAAD-LRSTQMMICLKDLVPAAQNNVNAQFIVLEKG 242
                  ERVGAGAPVYLSAVLEY+AA+ +    M+  LK +VPAAQNN+N +FI+L+KG
Sbjct: 185 LKAGKYAERVGAGAPVYLSAVLEYLAAENMEPKPMLQPLKHIVPAAQNNINTKFILLDKG 244

Query: 243 KATVEGQNKTCLSLVADETAAVHFQLWGDECDAVEPSDIIRLTNGIFSYSRNNLVLRAGK 302
           K T+EGQ KTCL+LVADETAAVHFQ+WGDEC+A EP DII L NGIFSYSRNNLVLRAGK
Sbjct: 245 KVTLEGQYKTCLALVADETAAVHFQMWGDECNAFEPGDIIHLANGIFSYSRNNLVLRAGK 304

Query: 303 RGKIGKVGEFNMVFVEMPNMSEIHWVPDATDSK 307
           RGK  KVGEF M FVE PN+SEI W PD  DS+
Sbjct: 305 RGKAEKVGEFTMAFVETPNLSEIRWGPDPCDSR 336

[Close]

BLAST of Sgr019727.1 vs. NCBI nr
Match: KDP21535.1 (hypothetical protein JCGZ_22006 [Jatropha curcas])

HSP 1 Score: 272.3 bits (695), Expect = 5.0e-69
Identity = 159/212 (75.00%), Postives = 171/212 (80.66%), Query Frame = 0


Query: 1   MSSTDAP------AKGGRGKKSAAKSVSRSHKAGLQFPVGRVARYLKKGRYAQRVGSGSP 60
           MSST  P      A+GGRG  S AKSVSRSHKAGLQFPVGRVAR+LK+GRYAQRVGSGSP
Sbjct: 1   MSSTTVPSATAKTARGGRG-ISKAKSVSRSHKAGLQFPVGRVARFLKRGRYAQRVGSGSP 60

Query: 61  VYLSAVLEYLAAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVM 120
           VYLSAVLEYLAAEVLELAGNAARDNKK RIIPRHIQLAVRNDEELSKLLGSVTIA+GGV+
Sbjct: 61  VYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIANGGVL 120

Query: 121 PKIHQSLLPKKAGKEKG----------EIGSTKGGRGKPKAAKSVSRSQKAGLQFPV--- 180
           P IHQ+LLPKK  K KG            GSTKGGRGKPK++KSVSRSQKAGLQFPV   
Sbjct: 121 PNIHQNLLPKKTAKGKGLGINRKPAMSSGGSTKGGRGKPKSSKSVSRSQKAGLQFPVGRI 180

Query: 181 ----------ERVGAGAPVYLSAVLEYIAADL 184
                     +RVGAGAPVYLSAVLEY+AA++
Sbjct: 181 ARFLKAGKYADRVGAGAPVYLSAVLEYLAAEV 211

[Close]

BLAST of Sgr019727.1 vs. NCBI nr
Match: KAF4368296.1 (hypothetical protein G4B88_008600 [Cannabis sativa])

HSP 1 Score: 269.6 bits (688), Expect = 3.3e-68
Identity = 157/221 (71.04%), Postives = 170/221 (76.92%), Query Frame = 0


Query: 1   MSSTDAPA--KGGRGKKSAAKSVSRSHKAGLQFPVGRVARYLKKGRYAQRVGSGSPVYLS 60
           M ST A    KGGRGK  A KSVSRS KAGLQFPVGR+AR+LKKGRYAQRVGSGSPVYLS
Sbjct: 536 MDSTAAATTKKGGRGKPKANKSVSRSSKAGLQFPVGRIARFLKKGRYAQRVGSGSPVYLS 595

Query: 61  AVLEYLAAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIH 120
           AVLEYLAAE+LELAGNAARDNKK+RIIPRHIQLAVRNDEELSKLLG+VTIA+GGV+P IH
Sbjct: 596 AVLEYLAAELLELAGNAARDNKKSRIIPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIH 655

Query: 121 QSLLPKKAGKEKGEIGS-----------------------TKGGRGKPKAAKSVSRSQKA 180
           Q+LLPKK GK K EIGS                       TKGGRGKPK++KSVSRS KA
Sbjct: 656 QTLLPKKVGKGKDEIGSASQEVYLYFDPDSKTLKMSTAATTKGGRGKPKSSKSVSRSSKA 715

Query: 181 GLQFPV-------------ERVGAGAPVYLSAVLEYIAADL 184
           GLQFPV             ERVGAGAPVYLSAVLEY+AA++
Sbjct: 716 GLQFPVGRIARFLKNGKYAERVGAGAPVYLSAVLEYLAAEV 756

[Close]

BLAST of Sgr019727.1 vs. NCBI nr
Match: GAY40811.1 (hypothetical protein CUMW_054740 [Citrus unshiu])

HSP 1 Score: 269.6 bits (688), Expect = 3.3e-68
Identity = 154/223 (69.06%), Postives = 166/223 (74.44%), Query Frame = 0


Query: 1   MSSTDAPAKGGRGKKSAAKSVSRSHKAGLQFPVGRVARYLKKGRYAQRVGSGSPVYLSAV 60
           MSS  A  KGGRG+    K VSRSHKAGLQFPVGRVAR+LKKGRYAQRVGSGSPVYLSAV
Sbjct: 1   MSSEAAATKGGRGRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120
           LEYLAAEVLELAGNAARDNKK RIIPRHIQLAV+NDEE SKLLGSVTIA+GGV+P IHQ+
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQN 120

Query: 121 LLPKKAGKEKGEI---------------------------GSTKGGRGKPKAAKSVSRSQ 180
           LLPKKA   KGEI                           GSTKGGRGKPK+ KS+SRS 
Sbjct: 121 LLPKKAAARKGEIGSVSQEASPESASKRAFALFCQSMSSAGSTKGGRGKPKSTKSISRSH 180

Query: 181 KAGLQFPV-------------ERVGAGAPVYLSAVLEYIAADL 184
           KAGLQFPV             +RVGAGAPVYLSAVLEY+AA++
Sbjct: 181 KAGLQFPVGRIARFLKAGKYADRVGAGAPVYLSAVLEYLAAEV 223

[Close]

BLAST of Sgr019727.1 vs. NCBI nr
Match: KAF4357682.1 (hypothetical protein F8388_007218 [Cannabis sativa])

HSP 1 Score: 256.5 bits (654), Expect = 2.9e-64
Identity = 157/255 (61.57%), Postives = 170/255 (66.67%), Query Frame = 0


Query: 1   MSSTDAPA--KGGRGKKSAAKSVSRSHKAGLQFPVGRVARYLKKGRYAQRVGSGSPVYLS 60
           M ST A    KGGRGK  A KSVSRS KAGLQFPVGR+AR+LKKGRYAQRVGSGSPVYLS
Sbjct: 80  MDSTAAATTKKGGRGKPKANKSVSRSSKAGLQFPVGRIARFLKKGRYAQRVGSGSPVYLS 139

Query: 61  AVLEYLAAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIH 120
           AVLEYLAAE+LELAGNAARDNKK+RIIPRHIQLAVRNDEELSKLLG+VTIA+GGV+P IH
Sbjct: 140 AVLEYLAAELLELAGNAARDNKKSRIIPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIH 199

Query: 121 QSLLPKKAGKEKGEIGS------------------------------------------- 180
           Q+LLPKK GK K EIGS                                           
Sbjct: 200 QTLLPKKVGKGKDEIGSASQDLVEEVGLLCKHSLSLQYVSFSLSCRSSCSITFPRVYLYF 259

Query: 181 --------------TKGGRGKPKAAKSVSRSQKAGLQFPV-------------ERVGAGA 184
                         TKGGRGKPK++KSVSRS KAGLQFPV             ERVGAGA
Sbjct: 260 DPDSKTLKMSTAATTKGGRGKPKSSKSVSRSSKAGLQFPVGRIARFLKNGKYAERVGAGA 319

[Close]

BLAST of Sgr019727.1 vs. ExPASy Swiss-Prot
Match: O65759 (Histone H2AX OS=Cicer arietinum OX=3827 GN=HIS2A PE=2 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 8.1e-54
Identity = 112/135 (82.96%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 1   MSSTDAPAKGGRGKKSAAKSVSRSHKAGLQFPVGRVARYLKKGRYAQRVGSGSPVYLSAV 60
           MSST A  KGGRGK  A+KSVSRS KAGLQFPVGR+AR+LK G+YA+RVG+G+PVYLSAV
Sbjct: 1   MSST-ATTKGGRGKPKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120
           LEYLAAEVLELAGNAARDNK  RI+PRHIQLAVRNDEELSKLLGSVTIA+GGV+P IHQ+
Sbjct: 61  LEYLAAEVLELAGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 121 LLPKKAGKEKGEIGS 136
           LLPKK GK KGEIGS
Sbjct: 121 LLPKKVGKGKGEIGS 134

[Close]

BLAST of Sgr019727.1 vs. ExPASy Swiss-Prot
Match: O04848 (Probable histone H2AXa OS=Arabidopsis thaliana OX=3702 GN=At1g08880 PE=1 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.4e-53
Identity = 107/127 (84.25%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 9   KGGRGKKSAAKSVSRSHKAGLQFPVGRVARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEV 68
           KGGRGK  A KSVSRS KAGLQFPVGR+AR+LK G+YA+RVG+G+PVYLSAVLEYLAAEV
Sbjct: 11  KGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEV 70

Query: 69  LELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKAGK 128
           LELAGNAARDNKKTRI+PRHIQLAVRNDEELSKLLGSVTIA+GGV+P IHQ+LLP K GK
Sbjct: 71  LELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVGK 130

Query: 129 EKGEIGS 136
            KG+IGS
Sbjct: 131 NKGDIGS 137

[Close]

BLAST of Sgr019727.1 vs. ExPASy Swiss-Prot
Match: Q9S9K7 (Probable histone H2AXb OS=Arabidopsis thaliana OX=3702 GN=At1g54690 PE=1 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.8e-53
Identity = 107/127 (84.25%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 9   KGGRGKKSAAKSVSRSHKAGLQFPVGRVARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEV 68
           KGGRGK  A KSVSRS KAGLQFPVGR+AR+LK G+YA+RVG+G+PVYLSAVLEYLAAEV
Sbjct: 11  KGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 70

Query: 69  LELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKAGK 128
           LELAGNAARDNKKTRI+PRHIQLAVRNDEELSKLLGSVTIA+GGV+P IHQ+LLP K GK
Sbjct: 71  LELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVGK 130

Query: 129 EKGEIGS 136
            KG+IGS
Sbjct: 131 NKGDIGS 137

[Close]

BLAST of Sgr019727.1 vs. ExPASy Swiss-Prot
Match: P35063 (Histone H2AX OS=Picea abies OX=3329 PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.4e-53
Identity = 106/128 (82.81%), Postives = 120/128 (93.75%), Query Frame = 0


Query: 8   AKGGRGKKSAAKSVSRSHKAGLQFPVGRVARYLKKGRYAQRVGSGSPVYLSAVLEYLAAE 67
           AKGGRGK  + KSVSRS KAGLQFPVGR+AR+LK G+YA+RVG+G+PVYL+AVLEYLAAE
Sbjct: 6   AKGGRGKAKSTKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAE 65

Query: 68  VLELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKAG 127
           VLELAGNAARDNKK RI+PRHIQLAVRNDEELSKLLG+VTIA+GGV+P IHQ LLPKK+G
Sbjct: 66  VLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQVLLPKKSG 125

Query: 128 KEKGEIGS 136
           K+KGEIGS
Sbjct: 126 KDKGEIGS 133

[Close]

BLAST of Sgr019727.1 vs. ExPASy Swiss-Prot
Match: A2ZL69 (Probable histone H2AXb OS=Oryza sativa subsp. indica OX=39946 GN=OsI_037312 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 5.8e-52
Identity = 104/132 (78.79%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 4   TDAPAKGGRGKKSAAKSVSRSHKAGLQFPVGRVARYLKKGRYAQRVGSGSPVYLSAVLEY 63
           + A   GGRGK   +KSVSRS KAGLQFPVGR+ARYLK G+YA+RVG+G+PVYLSAVLEY
Sbjct: 2   SSAGGGGGRGKSKGSKSVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEY 61

Query: 64  LAAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLP 123
           LAAEVLELAGNAARDNKK RI+PRHIQLAVRNDEELS+LLG+VTIA+GGV+P IHQ+LLP
Sbjct: 62  LAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLP 121

Query: 124 KKAGKEKGEIGS 136
           KK GK+K +IGS
Sbjct: 122 KKGGKDKADIGS 133

[Close]

BLAST of Sgr019727.1 vs. ExPASy TrEMBL
Match: A0A067JNE6 (Histone H2A OS=Jatropha curcas OX=180498 GN=JCGZ_22006 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 2.4e-69
Identity = 159/212 (75.00%), Postives = 171/212 (80.66%), Query Frame = 0


Query: 1   MSSTDAP------AKGGRGKKSAAKSVSRSHKAGLQFPVGRVARYLKKGRYAQRVGSGSP 60
           MSST  P      A+GGRG  S AKSVSRSHKAGLQFPVGRVAR+LK+GRYAQRVGSGSP
Sbjct: 1   MSSTTVPSATAKTARGGRG-ISKAKSVSRSHKAGLQFPVGRVARFLKRGRYAQRVGSGSP 60

Query: 61  VYLSAVLEYLAAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVM 120
           VYLSAVLEYLAAEVLELAGNAARDNKK RIIPRHIQLAVRNDEELSKLLGSVTIA+GGV+
Sbjct: 61  VYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIANGGVL 120

Query: 121 PKIHQSLLPKKAGKEKG----------EIGSTKGGRGKPKAAKSVSRSQKAGLQFPV--- 180
           P IHQ+LLPKK  K KG            GSTKGGRGKPK++KSVSRSQKAGLQFPV   
Sbjct: 121 PNIHQNLLPKKTAKGKGLGINRKPAMSSGGSTKGGRGKPKSSKSVSRSQKAGLQFPVGRI 180

Query: 181 ----------ERVGAGAPVYLSAVLEYIAADL 184
                     +RVGAGAPVYLSAVLEY+AA++
Sbjct: 181 ARFLKAGKYADRVGAGAPVYLSAVLEYLAAEV 211

[Close]

BLAST of Sgr019727.1 vs. ExPASy TrEMBL
Match: A0A7J6FC78 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_008600 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 1.6e-68
Identity = 157/221 (71.04%), Postives = 170/221 (76.92%), Query Frame = 0


Query: 1   MSSTDAPA--KGGRGKKSAAKSVSRSHKAGLQFPVGRVARYLKKGRYAQRVGSGSPVYLS 60
           M ST A    KGGRGK  A KSVSRS KAGLQFPVGR+AR+LKKGRYAQRVGSGSPVYLS
Sbjct: 536 MDSTAAATTKKGGRGKPKANKSVSRSSKAGLQFPVGRIARFLKKGRYAQRVGSGSPVYLS 595

Query: 61  AVLEYLAAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIH 120
           AVLEYLAAE+LELAGNAARDNKK+RIIPRHIQLAVRNDEELSKLLG+VTIA+GGV+P IH
Sbjct: 596 AVLEYLAAELLELAGNAARDNKKSRIIPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIH 655

Query: 121 QSLLPKKAGKEKGEIGS-----------------------TKGGRGKPKAAKSVSRSQKA 180
           Q+LLPKK GK K EIGS                       TKGGRGKPK++KSVSRS KA
Sbjct: 656 QTLLPKKVGKGKDEIGSASQEVYLYFDPDSKTLKMSTAATTKGGRGKPKSSKSVSRSSKA 715

Query: 181 GLQFPV-------------ERVGAGAPVYLSAVLEYIAADL 184
           GLQFPV             ERVGAGAPVYLSAVLEY+AA++
Sbjct: 716 GLQFPVGRIARFLKNGKYAERVGAGAPVYLSAVLEYLAAEV 756

[Close]

BLAST of Sgr019727.1 vs. ExPASy TrEMBL
Match: A0A2H5NLL6 (Histone H2A OS=Citrus unshiu OX=55188 GN=CUMW_054740 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 1.6e-68
Identity = 154/223 (69.06%), Postives = 166/223 (74.44%), Query Frame = 0


Query: 1   MSSTDAPAKGGRGKKSAAKSVSRSHKAGLQFPVGRVARYLKKGRYAQRVGSGSPVYLSAV 60
           MSS  A  KGGRG+    K VSRSHKAGLQFPVGRVAR+LKKGRYAQRVGSGSPVYLSAV
Sbjct: 1   MSSEAAATKGGRGRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120
           LEYLAAEVLELAGNAARDNKK RIIPRHIQLAV+NDEE SKLLGSVTIA+GGV+P IHQ+
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQN 120

Query: 121 LLPKKAGKEKGEI---------------------------GSTKGGRGKPKAAKSVSRSQ 180
           LLPKKA   KGEI                           GSTKGGRGKPK+ KS+SRS 
Sbjct: 121 LLPKKAAARKGEIGSVSQEASPESASKRAFALFCQSMSSAGSTKGGRGKPKSTKSISRSH 180

Query: 181 KAGLQFPV-------------ERVGAGAPVYLSAVLEYIAADL 184
           KAGLQFPV             +RVGAGAPVYLSAVLEY+AA++
Sbjct: 181 KAGLQFPVGRIARFLKAGKYADRVGAGAPVYLSAVLEYLAAEV 223

[Close]

BLAST of Sgr019727.1 vs. ExPASy TrEMBL
Match: A0A7J6EH34 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_007218 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 1.4e-64
Identity = 157/255 (61.57%), Postives = 170/255 (66.67%), Query Frame = 0


Query: 1   MSSTDAPA--KGGRGKKSAAKSVSRSHKAGLQFPVGRVARYLKKGRYAQRVGSGSPVYLS 60
           M ST A    KGGRGK  A KSVSRS KAGLQFPVGR+AR+LKKGRYAQRVGSGSPVYLS
Sbjct: 80  MDSTAAATTKKGGRGKPKANKSVSRSSKAGLQFPVGRIARFLKKGRYAQRVGSGSPVYLS 139

Query: 61  AVLEYLAAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIH 120
           AVLEYLAAE+LELAGNAARDNKK+RIIPRHIQLAVRNDEELSKLLG+VTIA+GGV+P IH
Sbjct: 140 AVLEYLAAELLELAGNAARDNKKSRIIPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIH 199

Query: 121 QSLLPKKAGKEKGEIGS------------------------------------------- 180
           Q+LLPKK GK K EIGS                                           
Sbjct: 200 QTLLPKKVGKGKDEIGSASQDLVEEVGLLCKHSLSLQYVSFSLSCRSSCSITFPRVYLYF 259

Query: 181 --------------TKGGRGKPKAAKSVSRSQKAGLQFPV-------------ERVGAGA 184
                         TKGGRGKPK++KSVSRS KAGLQFPV             ERVGAGA
Sbjct: 260 DPDSKTLKMSTAATTKGGRGKPKSSKSVSRSSKAGLQFPVGRIARFLKNGKYAERVGAGA 319

[Close]

BLAST of Sgr019727.1 vs. ExPASy TrEMBL
Match: A0A6J1DA92 (Histone H2A OS=Momordica charantia OX=3673 GN=LOC111018467 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.1e-60
Identity = 130/137 (94.89%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MSSTDAPAKGGRGKKSAAKSVSRSHKAGLQFPVGRVARYLKKGRYAQRVGSGSPVYLSAV 60
           MSSTDAPAKGGRGKKS++KSVSRS+KAGLQFPVGR+ARYLKKGRYAQRVGSGSPVYLSAV
Sbjct: 1   MSSTDAPAKGGRGKKSSSKSVSRSYKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120
           LEYLAAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS
Sbjct: 61  LEYLAAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120

Query: 121 LLPKK--AGKEKGEIGS 136
           LLPKK  AGKEK EIGS
Sbjct: 121 LLPKKAAAGKEKAEIGS 137

[Close]

BLAST of Sgr019727.1 vs. TAIR 10
Match: AT1G08880.1 (Histone superfamily protein )

HSP 1 Score: 211.5 bits (537), Expect = 9.8e-55
Identity = 107/127 (84.25%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 9   KGGRGKKSAAKSVSRSHKAGLQFPVGRVARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEV 68
           KGGRGK  A KSVSRS KAGLQFPVGR+AR+LK G+YA+RVG+G+PVYLSAVLEYLAAEV
Sbjct: 11  KGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEV 70

Query: 69  LELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKAGK 128
           LELAGNAARDNKKTRI+PRHIQLAVRNDEELSKLLGSVTIA+GGV+P IHQ+LLP K GK
Sbjct: 71  LELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVGK 130

Query: 129 EKGEIGS 136
            KG+IGS
Sbjct: 131 NKGDIGS 137

[Close]

BLAST of Sgr019727.1 vs. TAIR 10
Match: AT1G54690.1 (gamma histone variant H2AX )

HSP 1 Score: 211.1 bits (536), Expect = 1.3e-54
Identity = 107/127 (84.25%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 9   KGGRGKKSAAKSVSRSHKAGLQFPVGRVARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEV 68
           KGGRGK  A KSVSRS KAGLQFPVGR+AR+LK G+YA+RVG+G+PVYLSAVLEYLAAEV
Sbjct: 11  KGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 70

Query: 69  LELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKAGK 128
           LELAGNAARDNKKTRI+PRHIQLAVRNDEELSKLLGSVTIA+GGV+P IHQ+LLP K GK
Sbjct: 71  LELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVGK 130

Query: 129 EKGEIGS 136
            KG+IGS
Sbjct: 131 NKGDIGS 137

[Close]

BLAST of Sgr019727.1 vs. TAIR 10
Match: AT4G27230.1 (histone H2A 2 )

HSP 1 Score: 189.9 bits (481), Expect = 3.1e-48
Identity = 99/124 (79.84%), Postives = 110/124 (88.71%), Query Frame = 0


Query: 11  GRGKK----SAAKSVSRSHKAGLQFPVGRVARYLKKGRYAQRVGSGSPVYLSAVLEYLAA 70
           GRGK+    +A KS SRS KAGLQFPVGR+AR+LK G+YA+RVG+G+PVYL+AVLEYLAA
Sbjct: 3   GRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62

Query: 71  EVLELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKA 130
           EVLELAGNAARDNKKTRI+PRHIQLAVRNDEELSKLLG VTIA+GGVMP IH  LLPKKA
Sbjct: 63  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKA 122

[Close]

BLAST of Sgr019727.1 vs. TAIR 10
Match: AT4G27230.2 (histone H2A 2 )

HSP 1 Score: 189.9 bits (481), Expect = 3.1e-48
Identity = 99/124 (79.84%), Postives = 110/124 (88.71%), Query Frame = 0


Query: 11  GRGKK----SAAKSVSRSHKAGLQFPVGRVARYLKKGRYAQRVGSGSPVYLSAVLEYLAA 70
           GRGK+    +A KS SRS KAGLQFPVGR+AR+LK G+YA+RVG+G+PVYL+AVLEYLAA
Sbjct: 3   GRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62

Query: 71  EVLELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKA 130
           EVLELAGNAARDNKKTRI+PRHIQLAVRNDEELSKLLG VTIA+GGVMP IH  LLPKKA
Sbjct: 63  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKA 122

[Close]

BLAST of Sgr019727.1 vs. TAIR 10
Match: AT1G51060.1 (histone H2A 10 )

HSP 1 Score: 188.3 bits (477), Expect = 8.9e-48
Identity = 98/124 (79.03%), Postives = 109/124 (87.90%), Query Frame = 0


Query: 11  GRGKK----SAAKSVSRSHKAGLQFPVGRVARYLKKGRYAQRVGSGSPVYLSAVLEYLAA 70
           GRGK     SA K+ +RS KAGLQFPVGR+AR+LKKG+YA+RVG+G+PVYL+AVLEYLAA
Sbjct: 3   GRGKTLGSGSAKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAA 62

Query: 71  EVLELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKA 130
           EVLELAGNAARDNKKTRI+PRHIQLAVRNDEELSKLLG VTIA+GGVMP IH  LLPKK 
Sbjct: 63  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKT 122

The following BLAST results are available for this feature:

BLAST of Sgr019727.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG8389410.1	4.5e-118	71.77	hypothetical protein BUALT_Bualt02G0226300 [Buddleja alternifolia]	[more]
KDP21535.1	5.0e-69	75.00	hypothetical protein JCGZ_22006 [Jatropha curcas]	[more]
KAF4368296.1	3.3e-68	71.04	hypothetical protein G4B88_008600 [Cannabis sativa]	[more]
GAY40811.1	3.3e-68	69.06	hypothetical protein CUMW_054740 [Citrus unshiu]	[more]
KAF4357682.1	2.9e-64	61.57	hypothetical protein F8388_007218 [Cannabis sativa]	[more]

BLAST of Sgr019727.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65759	8.1e-54	82.96	Histone H2AX OS=Cicer arietinum OX=3827 GN=HIS2A PE=2 SV=1	[more]
O04848	1.4e-53	84.25	Probable histone H2AXa OS=Arabidopsis thaliana OX=3702 GN=At1g08880 PE=1 SV=1	[more]
Q9S9K7	1.8e-53	84.25	Probable histone H2AXb OS=Arabidopsis thaliana OX=3702 GN=At1g54690 PE=1 SV=1	[more]
P35063	2.4e-53	82.81	Histone H2AX OS=Picea abies OX=3329 PE=2 SV=1	[more]
A2ZL69	5.8e-52	78.79	Probable histone H2AXb OS=Oryza sativa subsp. indica OX=39946 GN=OsI_037312 PE=3...	[more]

BLAST of Sgr019727.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A067JNE6	2.4e-69	75.00	Histone H2A OS=Jatropha curcas OX=180498 GN=JCGZ_22006 PE=3 SV=1	[more]
A0A7J6FC78	1.6e-68	71.04	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_008600 PE=3 SV=1	[more]
A0A2H5NLL6	1.6e-68	69.06	Histone H2A OS=Citrus unshiu OX=55188 GN=CUMW_054740 PE=3 SV=1	[more]
A0A7J6EH34	1.4e-64	61.57	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_007218 PE=3 SV=1	[more]
A0A6J1DA92	2.1e-60	94.89	Histone H2A OS=Momordica charantia OX=3673 GN=LOC111018467 PE=3 SV=1	[more]

BLAST of Sgr019727.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08880.1	9.8e-55	84.25	Histone superfamily protein	[more]
AT1G54690.1	1.3e-54	84.25	gamma histone variant H2AX	[more]
AT4G27230.1	3.1e-48	79.84	histone H2A 2	[more]
AT4G27230.2	3.1e-48	79.84	histone H2A 2	[more]
AT1G51060.1	8.9e-48	79.03	histone H2A 10	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002119	Histone H2A	PRINTS	PR00620	HISTONEH2A	coord: 63..76 score: 89.46 coord: 105..123 score: 63.11 coord: 77..91 score: 81.4 coord: 48..63 score: 75.0 coord: 19..41 score: 69.69
IPR002119	Histone H2A	SMART	SM00414	h2a4	coord: 136..214 e-value: 4.9E-5 score: 28.0 coord: 8..128 e-value: 1.0E-77 score: 274.2
IPR002119	Histone H2A	CDD	cd00074	H2A	coord: 9..125 e-value: 4.3245E-70 score: 211.04
IPR032454	Histone H2A, C-terminal domain	PFAM	PF16211	Histone_H2A_C	coord: 97..130 e-value: 1.6E-17 score: 63.0
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 121..189 e-value: 7.0E-5 score: 25.3
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 4..120 e-value: 2.3E-59 score: 200.7
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 10..129
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 135..184
None	No IPR available	GENE3D	2.40.50.140		coord: 190..296 e-value: 1.3E-22 score: 82.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR23430:SF322	HISTONE H2A	coord: 135..183
None	No IPR available	PANTHER	PTHR23430:SF322	HISTONE H2A	coord: 7..136
None	No IPR available	PANTHER	PTHR23430	HISTONE H2A	coord: 7..136
None	No IPR available	PANTHER	PTHR23430	HISTONE H2A	coord: 135..183
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 3..94 e-value: 6.1E-15 score: 55.7
IPR032458	Histone H2A conserved site	PROSITE	PS00046	HISTONE_H2A	coord: 27..33
IPR032458	Histone H2A conserved site	PROSITE	PS00046	HISTONE_H2A	coord: 155..161
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 186..300

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sgr019727	Sgr019727	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sgr019727.1.exon1	Sgr019727.1.exon1	exon
Sgr019727.1.exon2	Sgr019727.1.exon2	exon
Sgr019727.1.exon3	Sgr019727.1.exon3	exon
Sgr019727.1.exon4	Sgr019727.1.exon4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Sgr019727.1	cds.Sgr019727.1	CDS
cds.Sgr019727.1	cds.Sgr019727.1_2	CDS
cds.Sgr019727.1	cds.Sgr019727.1_3	CDS
cds.Sgr019727.1	cds.Sgr019727.1_4	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sgr019727.1	Sgr019727.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031507	heterochromatin assembly
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity