Sgr019721.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr019721.1
Type	mRNA
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	autophagy-related protein 18g isoform X2
Location	tig00153403: 732032 .. 732583 (+)
Sequence length	461
RNA-Seq Expression	Sgr019721.1
Synteny	Sgr019721.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCATCAAGAAGGATGGAAAATTTGATTGATTTTGATCAAGCAAGCTGCGAGAAGTCTTGTACTCTCCTTTGTCAGCATCTAAATGAGATGTATTGGGAAAAAAGAGCAAGTGATTCTTGCATTTTGAGTCCGAAATCCTCAAATATTCTATCTACTCAAGCTGTAGGTTTGAGGATCGATGGTTCCCCTAGTGATTTATACTTCTCAAACAGCGATTTTGATTTTCCTTCCATCGAACAAGTTTCTTCCGAAAGACCATGTTTCAACAAAGGTGCAACTAATGTCTCCATTTTGAGCTGTGAATCATATGCTCGAAAGTAGCCGTATTGTTGCCATTAGGCCTGCTAACTTTGAAATTGCAGTTACTTTTGGACAGATTTGCCAGGAGGAACCCTGCAAGGCATTGGAGGGTGATAATGGTTGCCAAGTGATTAATGATACTTCAACTGATCATGTTGAGTCCAACCGTAATAGCCATTTCGAGTACGAAAACATATGTGGGGATGAGAATGAAAAATTTTTGGTGGCATGTTCACCTCTTCTGAAGAAG

mRNA sequence

GTTCATCAAGAAGGATGGAAAATTTGATTGATTTTGATCAAGCAAGCTGCGAGAAGTCTTGTACTCTCCTTTGTCAGCATCTAAATGAGATGTATTGGGAAAAAAGAGCAAGTGATTCTTGCATTTTGAGTCCGAAATCCTCAAATATTCTATCTACTCAAGCTGTAGGTTTGAGGATCGATGGTTCCCCTAGTGATTTATACTTCTCAAACAGCGATTTTGATTTTCCTTCCATCGAACAAGTTTCTTCCGAAAGACCATGTTTCAACAAAGTTACTTTTGGACAGATTTGCCAGGAGGAACCCTGCAAGGCATTGGAGGGTGATAATGGTTGCCAAGTGATTAATGATACTTCAACTGATCATGTTGAGTCCAACCGTAATAGCCATTTCGAGTACGAAAACATATGTGGGGATGAGAATGAAAAATTTTTGGTGGCATGTTCACCTCTTCTGAAGAAG

Coding sequence (CDS)

GTTCATCAAGAAGGATGGAAAATTTGATTGATTTTGATCAAGCAAGCTGCGAGAAGTCTTGTACTCTCCTTTGTCAGCATCTAAATGAGATGTATTGGGAAAAAAGAGCAAGTGATTCTTGCATTTTGAGTCCGAAATCCTCAAATATTCTATCTACTCAAGCTGTAGGTTTGAGGATCGATGGTTCCCCTAGTGATTTATACTTCTCAAACAGCGATTTTGATTTTCCTTCCATCGAACAAGTTTCTTCCGAAAGACCATGTTTCAACAAAGTTACTTTTGGACAGATTTGCCAGGAGGAACCCTGCAAGGCATTGGAGGGTGATAATGGTTGCCAAGTGATTAATGATACTTCAACTGATCATGTTGAGTCCAACCGTAATAGCCATTTCGAGTACGAAAACATATGTGGGGATGAGAATGAAAAATTTTTGGTGGCATGTTCACCTCTTCTGAAGAAG

Protein sequence

SSRRMENLIDFDQASCEKSCTLLCQHLNEMYWEKRASDSCILSPKSSNILSTQAVGLRIDGSPSDLYFSNSDFDFPSIEQVSSERPCFNKVTFGQICQEEPCKALEGDNGCQVINDTSTDHVESNRNSHFEYENICGDENEKFLVACSPLLKK

Homology

[Close]

BLAST of Sgr019721.1 vs. NCBI nr
Match: XP_022150195.1 (autophagy-related protein 18g isoform X4 [Momordica charantia])

HSP 1 Score: 237.3 bits (604), Expect = 8.9e-59
Identity = 117/142 (82.39%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   SSRRMENLIDFDQASCEKSCTLLCQHLNEMYWEKRASDSCILSPKSSNILSTQAVGLRID 60
           SSRRMENLIDFDQA CEKSCT LCQHLNEMYWEKRA+DSC+LSPKSSNI STQAV  RID
Sbjct: 715 SSRRMENLIDFDQAGCEKSCTPLCQHLNEMYWEKRANDSCMLSPKSSNIPSTQAVDSRID 774

Query: 61  GSPSDLYFSNSDFDFPSIEQVSSERPCFNKVTFGQICQEEPCKALEGDNGCQVINDTSTD 120
           GS +DLYFSNS+FDFPS+E VSSERP F+K TFGQI QEEPCKALEGD+GCQ+IND STD
Sbjct: 775 GSCNDLYFSNSNFDFPSVEHVSSERPPFDKDTFGQIFQEEPCKALEGDDGCQIINDISTD 834

Query: 121 HVESNRNSHFEYENICGDENEK 143
           HVE NRNS  EYENI  DEN K
Sbjct: 835 HVEPNRNSDVEYENISIDENVK 856

[Close]

BLAST of Sgr019721.1 vs. NCBI nr
Match: XP_022150192.1 (autophagy-related protein 18g isoform X2 [Momordica charantia])

HSP 1 Score: 237.3 bits (604), Expect = 8.9e-59
Identity = 117/142 (82.39%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   SSRRMENLIDFDQASCEKSCTLLCQHLNEMYWEKRASDSCILSPKSSNILSTQAVGLRID 60
           SSRRMENLIDFDQA CEKSCT LCQHLNEMYWEKRA+DSC+LSPKSSNI STQAV  RID
Sbjct: 822 SSRRMENLIDFDQAGCEKSCTPLCQHLNEMYWEKRANDSCMLSPKSSNIPSTQAVDSRID 881

Query: 61  GSPSDLYFSNSDFDFPSIEQVSSERPCFNKVTFGQICQEEPCKALEGDNGCQVINDTSTD 120
           GS +DLYFSNS+FDFPS+E VSSERP F+K TFGQI QEEPCKALEGD+GCQ+IND STD
Sbjct: 882 GSCNDLYFSNSNFDFPSVEHVSSERPPFDKDTFGQIFQEEPCKALEGDDGCQIINDISTD 941

Query: 121 HVESNRNSHFEYENICGDENEK 143
           HVE NRNS  EYENI  DEN K
Sbjct: 942 HVEPNRNSDVEYENISIDENVK 963

[Close]

BLAST of Sgr019721.1 vs. NCBI nr
Match: XP_022150196.1 (autophagy-related protein 18g isoform X5 [Momordica charantia])

HSP 1 Score: 237.3 bits (604), Expect = 8.9e-59
Identity = 117/142 (82.39%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   SSRRMENLIDFDQASCEKSCTLLCQHLNEMYWEKRASDSCILSPKSSNILSTQAVGLRID 60
           SSRRMENLIDFDQA CEKSCT LCQHLNEMYWEKRA+DSC+LSPKSSNI STQAV  RID
Sbjct: 617 SSRRMENLIDFDQAGCEKSCTPLCQHLNEMYWEKRANDSCMLSPKSSNIPSTQAVDSRID 676

Query: 61  GSPSDLYFSNSDFDFPSIEQVSSERPCFNKVTFGQICQEEPCKALEGDNGCQVINDTSTD 120
           GS +DLYFSNS+FDFPS+E VSSERP F+K TFGQI QEEPCKALEGD+GCQ+IND STD
Sbjct: 677 GSCNDLYFSNSNFDFPSVEHVSSERPPFDKDTFGQIFQEEPCKALEGDDGCQIINDISTD 736

Query: 121 HVESNRNSHFEYENICGDENEK 143
           HVE NRNS  EYENI  DEN K
Sbjct: 737 HVEPNRNSDVEYENISIDENVK 758

[Close]

BLAST of Sgr019721.1 vs. NCBI nr
Match: XP_022150194.1 (autophagy-related protein 18g isoform X3 [Momordica charantia])

HSP 1 Score: 237.3 bits (604), Expect = 8.9e-59
Identity = 117/142 (82.39%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   SSRRMENLIDFDQASCEKSCTLLCQHLNEMYWEKRASDSCILSPKSSNILSTQAVGLRID 60
           SSRRMENLIDFDQA CEKSCT LCQHLNEMYWEKRA+DSC+LSPKSSNI STQAV  RID
Sbjct: 789 SSRRMENLIDFDQAGCEKSCTPLCQHLNEMYWEKRANDSCMLSPKSSNIPSTQAVDSRID 848

Query: 61  GSPSDLYFSNSDFDFPSIEQVSSERPCFNKVTFGQICQEEPCKALEGDNGCQVINDTSTD 120
           GS +DLYFSNS+FDFPS+E VSSERP F+K TFGQI QEEPCKALEGD+GCQ+IND STD
Sbjct: 849 GSCNDLYFSNSNFDFPSVEHVSSERPPFDKDTFGQIFQEEPCKALEGDDGCQIINDISTD 908

Query: 121 HVESNRNSHFEYENICGDENEK 143
           HVE NRNS  EYENI  DEN K
Sbjct: 909 HVEPNRNSDVEYENISIDENVK 930

[Close]

BLAST of Sgr019721.1 vs. NCBI nr
Match: XP_022150191.1 (autophagy-related protein 18g isoform X1 [Momordica charantia])

HSP 1 Score: 237.3 bits (604), Expect = 8.9e-59
Identity = 117/142 (82.39%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   SSRRMENLIDFDQASCEKSCTLLCQHLNEMYWEKRASDSCILSPKSSNILSTQAVGLRID 60
           SSRRMENLIDFDQA CEKSCT LCQHLNEMYWEKRA+DSC+LSPKSSNI STQAV  RID
Sbjct: 828 SSRRMENLIDFDQAGCEKSCTPLCQHLNEMYWEKRANDSCMLSPKSSNIPSTQAVDSRID 887

Query: 61  GSPSDLYFSNSDFDFPSIEQVSSERPCFNKVTFGQICQEEPCKALEGDNGCQVINDTSTD 120
           GS +DLYFSNS+FDFPS+E VSSERP F+K TFGQI QEEPCKALEGD+GCQ+IND STD
Sbjct: 888 GSCNDLYFSNSNFDFPSVEHVSSERPPFDKDTFGQIFQEEPCKALEGDDGCQIINDISTD 947

Query: 121 HVESNRNSHFEYENICGDENEK 143
           HVE NRNS  EYENI  DEN K
Sbjct: 948 HVEPNRNSDVEYENISIDENVK 969

[Close]

BLAST of Sgr019721.1 vs. ExPASy TrEMBL
Match: A0A6J1DAR0 (autophagy-related protein 18g isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018424 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 4.3e-59
Identity = 117/142 (82.39%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   SSRRMENLIDFDQASCEKSCTLLCQHLNEMYWEKRASDSCILSPKSSNILSTQAVGLRID 60
           SSRRMENLIDFDQA CEKSCT LCQHLNEMYWEKRA+DSC+LSPKSSNI STQAV  RID
Sbjct: 828 SSRRMENLIDFDQAGCEKSCTPLCQHLNEMYWEKRANDSCMLSPKSSNIPSTQAVDSRID 887

Query: 61  GSPSDLYFSNSDFDFPSIEQVSSERPCFNKVTFGQICQEEPCKALEGDNGCQVINDTSTD 120
           GS +DLYFSNS+FDFPS+E VSSERP F+K TFGQI QEEPCKALEGD+GCQ+IND STD
Sbjct: 888 GSCNDLYFSNSNFDFPSVEHVSSERPPFDKDTFGQIFQEEPCKALEGDDGCQIINDISTD 947

Query: 121 HVESNRNSHFEYENICGDENEK 143
           HVE NRNS  EYENI  DEN K
Sbjct: 948 HVEPNRNSDVEYENISIDENVK 969

[Close]

BLAST of Sgr019721.1 vs. ExPASy TrEMBL
Match: A0A6J1D997 (autophagy-related protein 18g isoform X3 OS=Momordica charantia OX=3673 GN=LOC111018424 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 4.3e-59
Identity = 117/142 (82.39%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   SSRRMENLIDFDQASCEKSCTLLCQHLNEMYWEKRASDSCILSPKSSNILSTQAVGLRID 60
           SSRRMENLIDFDQA CEKSCT LCQHLNEMYWEKRA+DSC+LSPKSSNI STQAV  RID
Sbjct: 789 SSRRMENLIDFDQAGCEKSCTPLCQHLNEMYWEKRANDSCMLSPKSSNIPSTQAVDSRID 848

Query: 61  GSPSDLYFSNSDFDFPSIEQVSSERPCFNKVTFGQICQEEPCKALEGDNGCQVINDTSTD 120
           GS +DLYFSNS+FDFPS+E VSSERP F+K TFGQI QEEPCKALEGD+GCQ+IND STD
Sbjct: 849 GSCNDLYFSNSNFDFPSVEHVSSERPPFDKDTFGQIFQEEPCKALEGDDGCQIINDISTD 908

Query: 121 HVESNRNSHFEYENICGDENEK 143
           HVE NRNS  EYENI  DEN K
Sbjct: 909 HVEPNRNSDVEYENISIDENVK 930

[Close]

BLAST of Sgr019721.1 vs. ExPASy TrEMBL
Match: A0A6J1DA30 (autophagy-related protein 18g isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018424 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 4.3e-59
Identity = 117/142 (82.39%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   SSRRMENLIDFDQASCEKSCTLLCQHLNEMYWEKRASDSCILSPKSSNILSTQAVGLRID 60
           SSRRMENLIDFDQA CEKSCT LCQHLNEMYWEKRA+DSC+LSPKSSNI STQAV  RID
Sbjct: 822 SSRRMENLIDFDQAGCEKSCTPLCQHLNEMYWEKRANDSCMLSPKSSNIPSTQAVDSRID 881

Query: 61  GSPSDLYFSNSDFDFPSIEQVSSERPCFNKVTFGQICQEEPCKALEGDNGCQVINDTSTD 120
           GS +DLYFSNS+FDFPS+E VSSERP F+K TFGQI QEEPCKALEGD+GCQ+IND STD
Sbjct: 882 GSCNDLYFSNSNFDFPSVEHVSSERPPFDKDTFGQIFQEEPCKALEGDDGCQIINDISTD 941

Query: 121 HVESNRNSHFEYENICGDENEK 143
           HVE NRNS  EYENI  DEN K
Sbjct: 942 HVEPNRNSDVEYENISIDENVK 963

[Close]

BLAST of Sgr019721.1 vs. ExPASy TrEMBL
Match: A0A6J1DAR6 (autophagy-related protein 18g isoform X5 OS=Momordica charantia OX=3673 GN=LOC111018424 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 4.3e-59
Identity = 117/142 (82.39%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   SSRRMENLIDFDQASCEKSCTLLCQHLNEMYWEKRASDSCILSPKSSNILSTQAVGLRID 60
           SSRRMENLIDFDQA CEKSCT LCQHLNEMYWEKRA+DSC+LSPKSSNI STQAV  RID
Sbjct: 617 SSRRMENLIDFDQAGCEKSCTPLCQHLNEMYWEKRANDSCMLSPKSSNIPSTQAVDSRID 676

Query: 61  GSPSDLYFSNSDFDFPSIEQVSSERPCFNKVTFGQICQEEPCKALEGDNGCQVINDTSTD 120
           GS +DLYFSNS+FDFPS+E VSSERP F+K TFGQI QEEPCKALEGD+GCQ+IND STD
Sbjct: 677 GSCNDLYFSNSNFDFPSVEHVSSERPPFDKDTFGQIFQEEPCKALEGDDGCQIINDISTD 736

Query: 121 HVESNRNSHFEYENICGDENEK 143
           HVE NRNS  EYENI  DEN K
Sbjct: 737 HVEPNRNSDVEYENISIDENVK 758

[Close]

BLAST of Sgr019721.1 vs. ExPASy TrEMBL
Match: A0A6J1D7T7 (autophagy-related protein 18g isoform X4 OS=Momordica charantia OX=3673 GN=LOC111018424 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 4.3e-59
Identity = 117/142 (82.39%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   SSRRMENLIDFDQASCEKSCTLLCQHLNEMYWEKRASDSCILSPKSSNILSTQAVGLRID 60
           SSRRMENLIDFDQA CEKSCT LCQHLNEMYWEKRA+DSC+LSPKSSNI STQAV  RID
Sbjct: 715 SSRRMENLIDFDQAGCEKSCTPLCQHLNEMYWEKRANDSCMLSPKSSNIPSTQAVDSRID 774

Query: 61  GSPSDLYFSNSDFDFPSIEQVSSERPCFNKVTFGQICQEEPCKALEGDNGCQVINDTSTD 120
           GS +DLYFSNS+FDFPS+E VSSERP F+K TFGQI QEEPCKALEGD+GCQ+IND STD
Sbjct: 775 GSCNDLYFSNSNFDFPSVEHVSSERPPFDKDTFGQIFQEEPCKALEGDDGCQIINDISTD 834

Query: 121 HVESNRNSHFEYENICGDENEK 143
           HVE NRNS  EYENI  DEN K
Sbjct: 835 HVEPNRNSDVEYENISIDENVK 856

The following BLAST results are available for this feature:

BLAST of Sgr019721.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150195.1	8.9e-59	82.39	autophagy-related protein 18g isoform X4 [Momordica charantia]	[more]
XP_022150192.1	8.9e-59	82.39	autophagy-related protein 18g isoform X2 [Momordica charantia]	[more]
XP_022150196.1	8.9e-59	82.39	autophagy-related protein 18g isoform X5 [Momordica charantia]	[more]
XP_022150194.1	8.9e-59	82.39	autophagy-related protein 18g isoform X3 [Momordica charantia]	[more]
XP_022150191.1	8.9e-59	82.39	autophagy-related protein 18g isoform X1 [Momordica charantia]	[more]

BLAST of Sgr019721.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr019721.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DAR0	4.3e-59	82.39	autophagy-related protein 18g isoform X1 OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1D997	4.3e-59	82.39	autophagy-related protein 18g isoform X3 OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1DA30	4.3e-59	82.39	autophagy-related protein 18g isoform X2 OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1DAR6	4.3e-59	82.39	autophagy-related protein 18g isoform X5 OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1D7T7	4.3e-59	82.39	autophagy-related protein 18g isoform X4 OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of Sgr019721.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sgr019721	Sgr019721	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sgr019721.1.exon1	Sgr019721.1.exon1	exon
Sgr019721.1.exon2	Sgr019721.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Sgr019721.1	cds.Sgr019721.1	CDS
cds.Sgr019721.1	cds.Sgr019721.1_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sgr019721.1	Sgr019721.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0042594	response to starvation