Sgr019342.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr019342.1
Type	mRNA
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	LOB domain-containing protein
Location	tig00153346: 429528 .. 430378 (+)
Sequence length	633
RNA-Seq Expression	Sgr019342.1
Synteny	Sgr019342.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCCTCTGCTTCTGCTGCTTCTTCATCTTCTTCTTCTCCCTGTGGAGCTTGTAGGTTTCTCAGAAGAAAATGTGTCAATGGCTGCATCTTCGCTCCCTACTTCCACCACGAACACGCTGCCTCTCACTTCTCCGCCATTCACAAAGTATTCGGGGCCAGCAACGCTTCCAAGCTTCTTGCTCACCTTCCGATCTCCCACCGCTGCGAAGCGGCGGTGACGATCTCGTACGAAGCTCAAGCTCGGATGCAAGATCCGATCTATGGCTGCGTCTCGCATATTTTCGCTCTCCAGCAACAGGTTCTCTCTTCTTTCGAGTGATCGTGTTAAGAATACGTGTAAAAGATTAAATTACCCTAACTTACTAGCTTAACTTTTTAGAGTGTTAAAGTATATGAATAAAGGATTAAATTCATCGTAATCTATCAGTTTAAACGTTTACGGGTCGTGAAACCATCTGAAACCCTAATTTTCTAGATCGATTTTGATCATTGTTTGGATTGTTCAAAAAATGGCAGGTTCTGAATCTGCGAGCTCAGGTGGCTTATCTGAGAGAACAAGCAGCTCAAATCCTTCTCAACAGCTATGCTACAAGAAACCCTAGCGAATTACTGTACGGTAAACCACCACTTTATTCCGACGAGCCATTACAGGATCTTCAAAGTTGGCTTCTGGCGGAGAACTGGAGCGCCGCCGTGCCGGAATTCGAGCCTGCAGCGGTGCCGGAAGTTGAGATGAGCTTCGCCGATTCAAATCTCATGGGATACGCCGGAGATTTCTGCTGCGAAGAGATCGTCGCCGGTTCCATTTCATTCTCTTCTCTAGATGTTCAGATCGACCAACTATAA

mRNA sequence

ATGGCGGCCTCTGCTTCTGCTGCTTCTTCATCTTCTTCTTCTCCCTGTGGAGCTTGTAGGTTTCTCAGAAGAAAATGTGTCAATGGCTGCATCTTCGCTCCCTACTTCCACCACGAACACGCTGCCTCTCACTTCTCCGCCATTCACAAAGTATTCGGGGCCAGCAACGCTTCCAAGCTTCTTGCTCACCTTCCGATCTCCCACCGCTGCGAAGCGGCGGTGACGATCTCGTACGAAGCTCAAGCTCGGATGCAAGATCCGATCTATGGCTGCGTCTCGCATATTTTCGCTCTCCAGCAACAGGTTCTGAATCTGCGAGCTCAGGTGGCTTATCTGAGAGAACAAGCAGCTCAAATCCTTCTCAACAGCTATGCTACAAGAAACCCTAGCGAATTACTGTACGGTAAACCACCACTTTATTCCGACGAGCCATTACAGGATCTTCAAAGTTGGCTTCTGGCGGAGAACTGGAGCGCCGCCGTGCCGGAATTCGAGCCTGCAGCGGTGCCGGAAGTTGAGATGAGCTTCGCCGATTCAAATCTCATGGGATACGCCGGAGATTTCTGCTGCGAAGAGATCGTCGCCGGTTCCATTTCATTCTCTTCTCTAGATGTTCAGATCGACCAACTATAA

Coding sequence (CDS)

ATGGCGGCCTCTGCTTCTGCTGCTTCTTCATCTTCTTCTTCTCCCTGTGGAGCTTGTAGGTTTCTCAGAAGAAAATGTGTCAATGGCTGCATCTTCGCTCCCTACTTCCACCACGAACACGCTGCCTCTCACTTCTCCGCCATTCACAAAGTATTCGGGGCCAGCAACGCTTCCAAGCTTCTTGCTCACCTTCCGATCTCCCACCGCTGCGAAGCGGCGGTGACGATCTCGTACGAAGCTCAAGCTCGGATGCAAGATCCGATCTATGGCTGCGTCTCGCATATTTTCGCTCTCCAGCAACAGGTTCTGAATCTGCGAGCTCAGGTGGCTTATCTGAGAGAACAAGCAGCTCAAATCCTTCTCAACAGCTATGCTACAAGAAACCCTAGCGAATTACTGTACGGTAAACCACCACTTTATTCCGACGAGCCATTACAGGATCTTCAAAGTTGGCTTCTGGCGGAGAACTGGAGCGCCGCCGTGCCGGAATTCGAGCCTGCAGCGGTGCCGGAAGTTGAGATGAGCTTCGCCGATTCAAATCTCATGGGATACGCCGGAGATTTCTGCTGCGAAGAGATCGTCGCCGGTTCCATTTCATTCTCTTCTCTAGATGTTCAGATCGACCAACTATAA

Protein sequence

MAASASAASSSSSSPCGACRFLRRKCVNGCIFAPYFHHEHAASHFSAIHKVFGASNASKLLAHLPISHRCEAAVTISYEAQARMQDPIYGCVSHIFALQQQVLNLRAQVAYLREQAAQILLNSYATRNPSELLYGKPPLYSDEPLQDLQSWLLAENWSAAVPEFEPAAVPEVEMSFADSNLMGYAGDFCCEEIVAGSISFSSLDVQIDQL

Homology

[Close]

BLAST of Sgr019342.1 vs. NCBI nr
Match: XP_022156602.1 (LOB domain-containing protein 29-like [Momordica charantia])

HSP 1 Score: 313.2 bits (801), Expect = 1.8e-81
Identity = 162/203 (79.80%), Postives = 178/203 (87.68%), Query Frame = 0


Query: 6   SAASSSSSSPCGACRFLRRKCVNGCIFAPYFHHEHAASHFSAIHKVFGASNASKLLAHLP 65
           +A++SSSSSPCGAC+FLRRKCVNGCIFAPYF HE   SHFSA+HKVFGASNASKLLAHLP
Sbjct: 2   AASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHLP 61

Query: 66  ISHRCEAAVTISYEAQARMQDPIYGCVSHIFALQQQVLNLRAQVAYLREQAAQILLNSYA 125
           +SHRCEAA+TISYEAQAR+QDPIYGCVSHIF LQQQVLNLRAQVAYLREQAAQILLN+Y 
Sbjct: 62  VSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILLNNYT 121

Query: 126 TRNPSELLYGKPPLYSDEPLQDLQSWLLAENWSAAVPEFEPAAVPEVEMSFADSNLMGYA 185
            RNP+ELLYGK P +S +PLQDLQSWLLAE+ SAA PEFEPAAVP VEMS AD N+   A
Sbjct: 122 IRNPNELLYGKSP-FSGDPLQDLQSWLLAEDRSAAAPEFEPAAVPFVEMSLADPNV---A 181

Query: 186 GDFCCEEIVAGSISFSSLDVQID 209
           GD CCEEI+    S  SLDVQI+
Sbjct: 182 GDCCCEEIIVDR-SIFSLDVQIN 199

[Close]

BLAST of Sgr019342.1 vs. NCBI nr
Match: XP_038896394.1 (LOB domain-containing protein 29-like [Benincasa hispida])

HSP 1 Score: 299.7 bits (766), Expect = 2.0e-77
Identity = 152/184 (82.61%), Postives = 165/184 (89.67%), Query Frame = 0


Query: 6   SAASSSSSSPCGACRFLRRKCVNGCIFAPYFHHEHAASHFSAIHKVFGASNASKLLAHLP 65
           +A+SSSSS PCGAC+FLRRKCVNGCIFAP+F HE  ASHFSAIHKVFGASNASKLLAHLP
Sbjct: 2   AASSSSSSPPCGACKFLRRKCVNGCIFAPHFRHELGASHFSAIHKVFGASNASKLLAHLP 61

Query: 66  ISHRCEAAVTISYEAQARMQDPIYGCVSHIFALQQQVLNLRAQVAYLREQAAQILLNSYA 125
           +SHRC+AAVTISYEAQAR+QDPIYGCVSHIFALQQQV+NLRAQVAYLREQAAQILLN+Y 
Sbjct: 62  VSHRCDAAVTISYEAQARLQDPIYGCVSHIFALQQQVMNLRAQVAYLREQAAQILLNNYT 121

Query: 126 TRNPSELLYGKPPLYSDEPLQDLQSWLLAENWSAAVPEFEPAAVPEVEMSFADSNLMGYA 185
           TRNP EL Y K P YSD+PL DLQ+WLLAE+ SAA PEFEPAAVP VEMS  DSNL   A
Sbjct: 122 TRNPIELPYEKSPFYSDDPLLDLQTWLLAESCSAAAPEFEPAAVPYVEMSVVDSNL---A 181

Query: 186 GDFC 190
           G+FC
Sbjct: 182 GNFC 182

[Close]

BLAST of Sgr019342.1 vs. NCBI nr
Match: XP_004150342.1 (LOB domain-containing protein 29 [Cucumis sativus] >KGN44703.1 hypothetical protein Csa_015971 [Cucumis sativus])

HSP 1 Score: 295.4 bits (755), Expect = 3.8e-76
Identity = 151/186 (81.18%), Postives = 162/186 (87.10%), Query Frame = 0


Query: 6   SAASSSSSSPCGACRFLRRKCVNGCIFAPYFHHEHAASHFSAIHKVFGASNASKLLAHLP 65
           +A+SSSS+ PCGAC+FLRRKCVNGCIFAPYF HE  ASHFSAIHKVFGASNASKLLAHLP
Sbjct: 2   AASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLP 61

Query: 66  ISHRCEAAVTISYEAQARMQDPIYGCVSHIFALQQQVLNLRAQVAYLREQAAQILLNSYA 125
           +SHRCEAAVTISYEAQAR+QDPIYGCVSHI ALQQQV+NLRAQVAYLREQAAQILLN+Y 
Sbjct: 62  VSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNYT 121

Query: 126 TRNPSELLYGKPPL-YSDEPLQDLQSWLLAENWSAAVPEFEPAAVPEVEMSFADSNLMGY 185
           TRNP+ELLY K P  YSD+P  DLQSWLLAE+ SA  PE EPAAVP  EMS  DS L   
Sbjct: 122 TRNPTELLYEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKL--- 181

Query: 186 AGDFCC 191
           AGDFCC
Sbjct: 182 AGDFCC 184

[Close]

BLAST of Sgr019342.1 vs. NCBI nr
Match: KAA0042058.1 (LOB domain-containing protein 29 [Cucumis melo var. makuwa] >TYK18001.1 LOB domain-containing protein 29 [Cucumis melo var. makuwa])

HSP 1 Score: 292.7 bits (748), Expect = 2.5e-75
Identity = 150/186 (80.65%), Postives = 163/186 (87.63%), Query Frame = 0


Query: 6   SAASSSSSSPCGACRFLRRKCVNGCIFAPYFHHEHAASHFSAIHKVFGASNASKLLAHLP 65
           +A+SSSSSSPCGAC+FLRRKCVNGCIFAPYF HE  ASHFSAIHKVFGASNASKLLAHLP
Sbjct: 2   AASSSSSSSPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLP 61

Query: 66  ISHRCEAAVTISYEAQARMQDPIYGCVSHIFALQQQVLNLRAQVAYLREQAAQILLNSYA 125
           +SHRCEAAVTISYEAQAR+QDPIYGCVSHI ALQQQV+NLRAQVA LREQAAQILLN+Y 
Sbjct: 62  VSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVACLREQAAQILLNNYT 121

Query: 126 TRNPSELLYGKPPL-YSDEPLQDLQSWLLAENWSAAVPEFEPAAVPEVEMSFADSNLMGY 185
           TRNP+EL Y K PL YSD+P  DLQSWLLAE+ + A PEFEPAA+P  EMS  +S L   
Sbjct: 122 TRNPTELPYEKSPLYYSDDPFLDLQSWLLAESCTVAAPEFEPAAIPYFEMSVVNSKL--- 181

Query: 186 AGDFCC 191
           AGDFCC
Sbjct: 182 AGDFCC 184

[Close]

BLAST of Sgr019342.1 vs. NCBI nr
Match: XP_008447245.1 (PREDICTED: LOB domain-containing protein 29 [Cucumis melo])

HSP 1 Score: 290.0 bits (741), Expect = 1.6e-74
Identity = 150/186 (80.65%), Postives = 161/186 (86.56%), Query Frame = 0


Query: 6   SAASSSSSSPCGACRFLRRKCVNGCIFAPYFHHEHAASHFSAIHKVFGASNASKLLAHLP 65
           +A+SSSSSSPCGAC+FLRRKCVNGCIFAPYF HE  ASHFSAIHKVFGASNASKLLAHLP
Sbjct: 2   AASSSSSSSPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLP 61

Query: 66  ISHRCEAAVTISYEAQARMQDPIYGCVSHIFALQQQVLNLRAQVAYLREQAAQILLNSYA 125
           +SHRCEAAVTISYEAQAR+QDPIYGCVSHI ALQQQV+NLRAQVA LREQAAQILLN+Y 
Sbjct: 62  VSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVACLREQAAQILLNNYT 121

Query: 126 TRNPSELLYGKPPL-YSDEPLQDLQSWLLAENWSAAVPEFEPAAVPEVEMSFADSNLMGY 185
           TRN +EL Y K P  YSD+P  DLQSWLL E+ +AA PEFEPAAVP  EMS  DS L   
Sbjct: 122 TRNSTELPYEKSPFYYSDDPFLDLQSWLLTESCTAAAPEFEPAAVPYFEMSVIDSKL--- 181

Query: 186 AGDFCC 191
           AGDFCC
Sbjct: 182 AGDFCC 184

[Close]

BLAST of Sgr019342.1 vs. ExPASy Swiss-Prot
Match: Q9M2J7 (LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 6.6e-47
Identity = 98/142 (69.01%), Postives = 117/142 (82.39%), Query Frame = 0


Query: 6   SAASSSSSSPCGACRFLRRKCVNGCIFAPYFHHEHAASHFSAIHKVFGASNASKLLAHLP 65
           +++SSSS SPCGAC+FLRRKC  GC+FAPYF HE  ASHF+AIHKVFGASNASKLL+HLP
Sbjct: 2   TSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLP 61

Query: 66  ISHRCEAAVTISYEAQARMQDPIYGCVSHIFALQQQVLNLRAQVAYLREQAAQ--ILLNS 125
           IS RCEAA+TISYEAQAR+QDPIYGCVSHIFALQQQV+NL+A++  L++QAAQ  I  +S
Sbjct: 62  ISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADS 121

Query: 126 YATRNPSELLYG---KPPLYSD 143
             + NP+   YG   K P + D
Sbjct: 122 PTSENPNS-YYGDTTKAPYHHD 142

[Close]

BLAST of Sgr019342.1 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 5.4e-41
Identity = 81/105 (77.14%), Postives = 94/105 (89.52%), Query Frame = 0


Query: 14  SPCGACRFLRRKCVNGCIFAPYFHHEHAASHFSAIHKVFGASNASKLLAHLPISHRCEAA 73
           SPCGAC+FLRRKCV GC+FAPYF HE  A+HF+AIHKVFGASN SKLLAHLP++ R EAA
Sbjct: 6   SPCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLADRPEAA 65

Query: 74  VTISYEAQARMQDPIYGCVSHIFALQQQVLNLRAQVAYLREQAAQ 119
           VTISYEAQAR++DPIYGCV+HIFALQQQV+ L+AQ+A L+  AAQ
Sbjct: 66  VTISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAAAAQ 110

[Close]

BLAST of Sgr019342.1 vs. ExPASy Swiss-Prot
Match: Q9SLB6 (LOB domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=LBD17 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.6e-40
Identity = 84/130 (64.62%), Postives = 103/130 (79.23%), Query Frame = 0


Query: 10  SSSSSPCGACRFLRRKCVNGCIFAPYFHHEHAASHFSAIHKVFGASNASKLLAHLPISHR 69
           + S SPCGAC+FLRR+CV GC+FAPYF HE  ASHF+AIH+VFGASNASKLL+HLP+  R
Sbjct: 2   TGSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMEDR 61

Query: 70  CEAAVTISYEAQARMQDPIYGCVSHIFALQQQVLNLRAQVAYLREQAAQ--ILLNSYATR 129
            EAA TI YEAQAR QDPIYGCVSHIF+LQQQV+NL+ Q+  L++QA Q  + ++S +  
Sbjct: 62  REAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMMAIDSPSIE 121

Query: 130 NPSELLYGKP 138
           NP+     KP
Sbjct: 122 NPNYYQDTKP 131

[Close]

BLAST of Sgr019342.1 vs. ExPASy Swiss-Prot
Match: O22131 (LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 SV=2)

HSP 1 Score: 155.6 bits (392), Expect = 6.2e-37
Identity = 78/142 (54.93%), Postives = 100/142 (70.42%), Query Frame = 0


Query: 2   AASASAASSSSSSPCGACRFLRRKCVNGCIFAPYFHHEHAASHFSAIHKVFGASNASKLL 61
           +    ++      PCGAC+FLRRKCV GCIFAPYF  E  +++F+A+HKVFGASN SKLL
Sbjct: 24  SGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLL 83

Query: 62  AHLPISHRCEAAVTISYEAQARMQDPIYGCVSHIFALQQQVLNLRAQVAYLREQAAQILL 121
            H+P+  R +A VTI YEAQAR++DPIYGCV+HIFALQQQV+NL+A+V+YL+   A + L
Sbjct: 84  LHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLASLEL 143

Query: 122 NSYATR-----NPSELLYGKPP 139
               TR      P  L +  PP
Sbjct: 144 PQPQTRPQPMPQPQPLFFTPPP 165

[Close]

BLAST of Sgr019342.1 vs. ExPASy Swiss-Prot
Match: Q9SJW5 (LOB domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=LBD14 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.8e-36
Identity = 76/138 (55.07%), Postives = 102/138 (73.91%), Query Frame = 0


Query: 14  SPCGACRFLRRKCVNGCIFAPYFHHEHAASHFSAIHKVFGASNASKLLAHLPISHRCEAA 73
           SPCG C+FLRRKCV GC+FAPYF +E  +S+F+AIHKVFGASN SKL++HLP   RC+A 
Sbjct: 6   SPCGGCKFLRRKCVEGCVFAPYFCYEEGSSNFAAIHKVFGASNFSKLISHLPDHDRCDAV 65

Query: 74  VTISYEAQARMQDPIYGCVSHIFALQQQVLNLRAQVAYLREQAAQILLNSYATRNPSELL 133
            TISYEA +R+ DPIYGCVS IF+LQQQV++L+AQV  LRE+A++     +   +P   +
Sbjct: 66  RTISYEAHSRLHDPIYGCVSQIFSLQQQVVSLQAQVVLLREEASR----RFPQDDPGCNM 125

Query: 134 YGKPPLYSDEPLQDLQSW 152
             +  + + +  QDL +W
Sbjct: 126 KQQEKVLAQQMPQDLHNW 139

[Close]

BLAST of Sgr019342.1 vs. ExPASy TrEMBL
Match: A0A6J1DSE8 (LOB domain-containing protein 29-like OS=Momordica charantia OX=3673 GN=LOC111023473 PE=3 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 8.5e-82
Identity = 162/203 (79.80%), Postives = 178/203 (87.68%), Query Frame = 0


Query: 6   SAASSSSSSPCGACRFLRRKCVNGCIFAPYFHHEHAASHFSAIHKVFGASNASKLLAHLP 65
           +A++SSSSSPCGAC+FLRRKCVNGCIFAPYF HE   SHFSA+HKVFGASNASKLLAHLP
Sbjct: 2   AASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHLP 61

Query: 66  ISHRCEAAVTISYEAQARMQDPIYGCVSHIFALQQQVLNLRAQVAYLREQAAQILLNSYA 125
           +SHRCEAA+TISYEAQAR+QDPIYGCVSHIF LQQQVLNLRAQVAYLREQAAQILLN+Y 
Sbjct: 62  VSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILLNNYT 121

Query: 126 TRNPSELLYGKPPLYSDEPLQDLQSWLLAENWSAAVPEFEPAAVPEVEMSFADSNLMGYA 185
            RNP+ELLYGK P +S +PLQDLQSWLLAE+ SAA PEFEPAAVP VEMS AD N+   A
Sbjct: 122 IRNPNELLYGKSP-FSGDPLQDLQSWLLAEDRSAAAPEFEPAAVPFVEMSLADPNV---A 181

Query: 186 GDFCCEEIVAGSISFSSLDVQID 209
           GD CCEEI+    S  SLDVQI+
Sbjct: 182 GDCCCEEIIVDR-SIFSLDVQIN 199

[Close]

BLAST of Sgr019342.1 vs. ExPASy TrEMBL
Match: A0A0A0K5D4 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G373460 PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.8e-76
Identity = 151/186 (81.18%), Postives = 162/186 (87.10%), Query Frame = 0


Query: 6   SAASSSSSSPCGACRFLRRKCVNGCIFAPYFHHEHAASHFSAIHKVFGASNASKLLAHLP 65
           +A+SSSS+ PCGAC+FLRRKCVNGCIFAPYF HE  ASHFSAIHKVFGASNASKLLAHLP
Sbjct: 2   AASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLP 61

Query: 66  ISHRCEAAVTISYEAQARMQDPIYGCVSHIFALQQQVLNLRAQVAYLREQAAQILLNSYA 125
           +SHRCEAAVTISYEAQAR+QDPIYGCVSHI ALQQQV+NLRAQVAYLREQAAQILLN+Y 
Sbjct: 62  VSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNYT 121

Query: 126 TRNPSELLYGKPPL-YSDEPLQDLQSWLLAENWSAAVPEFEPAAVPEVEMSFADSNLMGY 185
           TRNP+ELLY K P  YSD+P  DLQSWLLAE+ SA  PE EPAAVP  EMS  DS L   
Sbjct: 122 TRNPTELLYEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKL--- 181

Query: 186 AGDFCC 191
           AGDFCC
Sbjct: 182 AGDFCC 184

[Close]

BLAST of Sgr019342.1 vs. ExPASy TrEMBL
Match: A0A5D3D179 (LOB domain-containing protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003110 PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.2e-75
Identity = 150/186 (80.65%), Postives = 163/186 (87.63%), Query Frame = 0


Query: 6   SAASSSSSSPCGACRFLRRKCVNGCIFAPYFHHEHAASHFSAIHKVFGASNASKLLAHLP 65
           +A+SSSSSSPCGAC+FLRRKCVNGCIFAPYF HE  ASHFSAIHKVFGASNASKLLAHLP
Sbjct: 2   AASSSSSSSPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLP 61

Query: 66  ISHRCEAAVTISYEAQARMQDPIYGCVSHIFALQQQVLNLRAQVAYLREQAAQILLNSYA 125
           +SHRCEAAVTISYEAQAR+QDPIYGCVSHI ALQQQV+NLRAQVA LREQAAQILLN+Y 
Sbjct: 62  VSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVACLREQAAQILLNNYT 121

Query: 126 TRNPSELLYGKPPL-YSDEPLQDLQSWLLAENWSAAVPEFEPAAVPEVEMSFADSNLMGY 185
           TRNP+EL Y K PL YSD+P  DLQSWLLAE+ + A PEFEPAA+P  EMS  +S L   
Sbjct: 122 TRNPTELPYEKSPLYYSDDPFLDLQSWLLAESCTVAAPEFEPAAIPYFEMSVVNSKL--- 181

Query: 186 AGDFCC 191
           AGDFCC
Sbjct: 182 AGDFCC 184

[Close]

BLAST of Sgr019342.1 vs. ExPASy TrEMBL
Match: A0A1S3BGZ5 (LOB domain-containing protein 29 OS=Cucumis melo OX=3656 GN=LOC103489736 PE=3 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 7.7e-75
Identity = 150/186 (80.65%), Postives = 161/186 (86.56%), Query Frame = 0


Query: 6   SAASSSSSSPCGACRFLRRKCVNGCIFAPYFHHEHAASHFSAIHKVFGASNASKLLAHLP 65
           +A+SSSSSSPCGAC+FLRRKCVNGCIFAPYF HE  ASHFSAIHKVFGASNASKLLAHLP
Sbjct: 2   AASSSSSSSPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLP 61

Query: 66  ISHRCEAAVTISYEAQARMQDPIYGCVSHIFALQQQVLNLRAQVAYLREQAAQILLNSYA 125
           +SHRCEAAVTISYEAQAR+QDPIYGCVSHI ALQQQV+NLRAQVA LREQAAQILLN+Y 
Sbjct: 62  VSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVACLREQAAQILLNNYT 121

Query: 126 TRNPSELLYGKPPL-YSDEPLQDLQSWLLAENWSAAVPEFEPAAVPEVEMSFADSNLMGY 185
           TRN +EL Y K P  YSD+P  DLQSWLL E+ +AA PEFEPAAVP  EMS  DS L   
Sbjct: 122 TRNSTELPYEKSPFYYSDDPFLDLQSWLLTESCTAAAPEFEPAAVPYFEMSVIDSKL--- 181

Query: 186 AGDFCC 191
           AGDFCC
Sbjct: 182 AGDFCC 184

[Close]

BLAST of Sgr019342.1 vs. ExPASy TrEMBL
Match: A0A6J1KRG7 (LOB domain-containing protein 29-like OS=Cucurbita maxima OX=3661 GN=LOC111498009 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.2e-74
Identity = 146/187 (78.07%), Postives = 160/187 (85.56%), Query Frame = 0


Query: 4   SASAASSSSSSPCGACRFLRRKCVNGCIFAPYFHHEHAASHFSAIHKVFGASNASKLLAH 63
           +AS++SSSSS PCGAC+FLRRKCVNGCIFAPYF H+  ASHFSA+HKVFGASNASKLLAH
Sbjct: 2   AASSSSSSSSPPCGACKFLRRKCVNGCIFAPYFRHDLGASHFSAVHKVFGASNASKLLAH 61

Query: 64  LPISHRCEAAVTISYEAQARMQDPIYGCVSHIFALQQQVLNLRAQVAYLREQAAQILLNS 123
           LP+SHR +AAVTISYEAQAR+QDPIYGC+S IFALQ QV+NLRAQVAYLREQAAQILLN 
Sbjct: 62  LPVSHRSQAAVTISYEAQARLQDPIYGCISQIFALQHQVMNLRAQVAYLREQAAQILLNG 121

Query: 124 YATRNPSELLYGKPPLYSDEPLQDLQSWLLAENWSAAVPEFEPAAVPEVEMSFADSNLMG 183
           Y TRNP+ELLYG    YSDE L DLQ+WLL E+ S A PEFEP A P VEM  ADSNL  
Sbjct: 122 YITRNPNELLYGNSLSYSDEQLLDLQTWLLEESCSTAAPEFEPTAAPYVEMGIADSNL-- 181

Query: 184 YAGDFCC 191
            AGDFCC
Sbjct: 182 -AGDFCC 185

[Close]

BLAST of Sgr019342.1 vs. TAIR 10
Match: AT3G58190.1 (lateral organ boundaries-domain 29 )

HSP 1 Score: 188.7 bits (478), Expect = 4.7e-48
Identity = 98/142 (69.01%), Postives = 117/142 (82.39%), Query Frame = 0


Query: 6   SAASSSSSSPCGACRFLRRKCVNGCIFAPYFHHEHAASHFSAIHKVFGASNASKLLAHLP 65
           +++SSSS SPCGAC+FLRRKC  GC+FAPYF HE  ASHF+AIHKVFGASNASKLL+HLP
Sbjct: 2   TSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLP 61

Query: 66  ISHRCEAAVTISYEAQARMQDPIYGCVSHIFALQQQVLNLRAQVAYLREQAAQ--ILLNS 125
           IS RCEAA+TISYEAQAR+QDPIYGCVSHIFALQQQV+NL+A++  L++QAAQ  I  +S
Sbjct: 62  ISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADS 121

Query: 126 YATRNPSELLYG---KPPLYSD 143
             + NP+   YG   K P + D
Sbjct: 122 PTSENPNS-YYGDTTKAPYHHD 142

[Close]

BLAST of Sgr019342.1 vs. TAIR 10
Match: AT2G42440.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 167.5 bits (423), Expect = 1.1e-41
Identity = 84/130 (64.62%), Postives = 103/130 (79.23%), Query Frame = 0


Query: 10  SSSSSPCGACRFLRRKCVNGCIFAPYFHHEHAASHFSAIHKVFGASNASKLLAHLPISHR 69
           + S SPCGAC+FLRR+CV GC+FAPYF HE  ASHF+AIH+VFGASNASKLL+HLP+  R
Sbjct: 2   TGSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMEDR 61

Query: 70  CEAAVTISYEAQARMQDPIYGCVSHIFALQQQVLNLRAQVAYLREQAAQ--ILLNSYATR 129
            EAA TI YEAQAR QDPIYGCVSHIF+LQQQV+NL+ Q+  L++QA Q  + ++S +  
Sbjct: 62  REAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMMAIDSPSIE 121

Query: 130 NPSELLYGKP 138
           NP+     KP
Sbjct: 122 NPNYYQDTKP 131

[Close]

BLAST of Sgr019342.1 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 155.6 bits (392), Expect = 4.4e-38
Identity = 78/142 (54.93%), Postives = 100/142 (70.42%), Query Frame = 0


Query: 2   AASASAASSSSSSPCGACRFLRRKCVNGCIFAPYFHHEHAASHFSAIHKVFGASNASKLL 61
           +    ++      PCGAC+FLRRKCV GCIFAPYF  E  +++F+A+HKVFGASN SKLL
Sbjct: 24  SGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLL 83

Query: 62  AHLPISHRCEAAVTISYEAQARMQDPIYGCVSHIFALQQQVLNLRAQVAYLREQAAQILL 121
            H+P+  R +A VTI YEAQAR++DPIYGCV+HIFALQQQV+NL+A+V+YL+   A + L
Sbjct: 84  LHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLASLEL 143

Query: 122 NSYATR-----NPSELLYGKPP 139
               TR      P  L +  PP
Sbjct: 144 PQPQTRPQPMPQPQPLFFTPPP 165

[Close]

BLAST of Sgr019342.1 vs. TAIR 10
Match: AT2G31310.1 (LOB domain-containing protein 14 )

HSP 1 Score: 154.1 bits (388), Expect = 1.3e-37
Identity = 76/138 (55.07%), Postives = 102/138 (73.91%), Query Frame = 0


Query: 14  SPCGACRFLRRKCVNGCIFAPYFHHEHAASHFSAIHKVFGASNASKLLAHLPISHRCEAA 73
           SPCG C+FLRRKCV GC+FAPYF +E  +S+F+AIHKVFGASN SKL++HLP   RC+A 
Sbjct: 6   SPCGGCKFLRRKCVEGCVFAPYFCYEEGSSNFAAIHKVFGASNFSKLISHLPDHDRCDAV 65

Query: 74  VTISYEAQARMQDPIYGCVSHIFALQQQVLNLRAQVAYLREQAAQILLNSYATRNPSELL 133
            TISYEA +R+ DPIYGCVS IF+LQQQV++L+AQV  LRE+A++     +   +P   +
Sbjct: 66  RTISYEAHSRLHDPIYGCVSQIFSLQQQVVSLQAQVVLLREEASR----RFPQDDPGCNM 125

Query: 134 YGKPPLYSDEPLQDLQSW 152
             +  + + +  QDL +W
Sbjct: 126 KQQEKVLAQQMPQDLHNW 139

[Close]

BLAST of Sgr019342.1 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 )

HSP 1 Score: 152.1 bits (383), Expect = 4.8e-37
Identity = 75/117 (64.10%), Postives = 93/117 (79.49%), Query Frame = 0


Query: 1   MAASASAASSSSSSPCGACRFLRRKCVNGCIFAPYFHHEHAASHFSAIHKVFGASNASKL 60
           MA+S +  ++ + SPCGAC+FLRRKC + CIFAPYF  E  A+ F+AIHKVFGASN SKL
Sbjct: 1   MASSGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKL 60

Query: 61  LAHLPISHRCEAAVTISYEAQARMQDPIYGCVSHIFALQQQVLNLRAQVAYLREQAA 118
           L ++PI  RCEA VTI+YEAQAR+ DP+YGCVSHIFALQQQV  L++QV  ++ Q A
Sbjct: 61  LLNVPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIA 117

The following BLAST results are available for this feature:

BLAST of Sgr019342.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156602.1	1.8e-81	79.80	LOB domain-containing protein 29-like [Momordica charantia]	[more]
XP_038896394.1	2.0e-77	82.61	LOB domain-containing protein 29-like [Benincasa hispida]	[more]
XP_004150342.1	3.8e-76	81.18	LOB domain-containing protein 29 [Cucumis sativus] >KGN44703.1 hypothetical prot...	[more]
KAA0042058.1	2.5e-75	80.65	LOB domain-containing protein 29 [Cucumis melo var. makuwa] >TYK18001.1 LOB doma...	[more]
XP_008447245.1	1.6e-74	80.65	PREDICTED: LOB domain-containing protein 29 [Cucumis melo]	[more]

BLAST of Sgr019342.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2J7	6.6e-47	69.01	LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 S...	[more]
Q5UG13	5.4e-41	77.14	LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=C...	[more]
Q9SLB6	1.6e-40	64.62	LOB domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=LBD17 PE=2 S...	[more]
O22131	6.2e-37	54.93	LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 S...	[more]
Q9SJW5	1.8e-36	55.07	LOB domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=LBD14 PE=1 S...	[more]

BLAST of Sgr019342.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DSE8	8.5e-82	79.80	LOB domain-containing protein 29-like OS=Momordica charantia OX=3673 GN=LOC11102...	[more]
A0A0A0K5D4	1.8e-76	81.18	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G373460 PE=3 SV...	[more]
A0A5D3D179	1.2e-75	80.65	LOB domain-containing protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3BGZ5	7.7e-75	80.65	LOB domain-containing protein 29 OS=Cucumis melo OX=3656 GN=LOC103489736 PE=3 SV...	[more]
A0A6J1KRG7	2.2e-74	78.07	LOB domain-containing protein 29-like OS=Cucurbita maxima OX=3661 GN=LOC11149800...	[more]

BLAST of Sgr019342.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58190.1	4.7e-48	69.01	lateral organ boundaries-domain 29	[more]
AT2G42440.1	1.1e-41	64.62	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G45420.1	4.4e-38	54.93	LOB domain-containing protein 18	[more]
AT2G31310.1	1.3e-37	55.07	LOB domain-containing protein 14	[more]
AT2G42430.1	4.8e-37	64.10	lateral organ boundaries-domain 16	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 15..112 e-value: 9.8E-34 score: 115.9
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 14..116 score: 21.865377
None	No IPR available	PANTHER	PTHR31529	LOB DOMAIN CONTAINING PROTEIN	coord: 11..131
None	No IPR available	PANTHER	PTHR31529:SF26	LOB DOMAIN-CONTAINING PROTEIN 17-RELATED	coord: 11..131

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sgr019342	Sgr019342	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sgr019342.1.exon1	Sgr019342.1.exon1	exon
Sgr019342.1.exon2	Sgr019342.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Sgr019342.1	cds.Sgr019342.1	CDS
cds.Sgr019342.1	cds.Sgr019342.1_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sgr019342.1	Sgr019342.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus