Sgr018227.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr018227.1
Type	mRNA
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	33 kDa ribonucleoprotein, chloroplastic
Location	tig00153145: 492119 .. 494338 (-)
Sequence length	1062
RNA-Seq Expression	Sgr018227.1
Synteny	Sgr018227.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGCTTCTGCTGTCTCAATGGCTGCTGCAGCTTCAGTTCCCTCTTCTTCACTCTGCAAGAGAGTCTTGAGCCTCTCGTTCACCCAACATTCCAGCCAAATTCCCTCCCATTTCTCTCCGAAACAGAAACCATTGAAGTTTCTCGAGCTCAGAATTCATTTACCCAACTTTTTCCCTCTTTCTTTCGCCTCTGCTTCTCATCTTTACAGTGCTCCACCTGCATTCGACGGGCTCGAAGTCTCCGACCCTGAAAAAGAAGACGCAGAGGTAGAAGAAGAAAGCCAAGAGGAAGAGGAGCAAAAGGCATCGGTATCTCGCGAAGCAGGGAGGCTTTATATCGGAAATTTACCATATGCTATGACCTCTTCCCAATTGACTGAGGTCTTCGCCGAAGCCGGTCGTGTGGTTTCTGTAGAGGTTTGATCTCTAGCCCTTGGTCCGAGTTTCCGATTGAAGTAACTTTTTCCTTTATCTTTCTGAGTGGCTTCTTTTAGGGCTGATGAAAACTGCTTAGCCATTGTTGTTTTCTCTTATCTTCCGAATCTTCTGTTAGGTTATATATGACAAAGTTACAGATAGGAGCAGGGGATTTGCATTTGTGACAATGGCAACTCTGGAGGAAGCTAAAGAAGCAATTCGGATGTTTGATGGCTCTGTAAACCACTTCACTCTTTCTCTCTTCATTTCATTTGGTTTTAAGTTTTAACTTACCAATTTTTGAGATTTGTGCCTAATTTCTAACATTGAAGTTGATAGAAGTGGTAAAAAACTATGGGTATGCAGTTTGTCCTAGCTGAATCTCTCTCTCTCTCTCTCTCTCTCGGGCTGAGAGAGAGTAATTGCCTCTCAACAGAGAATTTTCAGAGAGATGTTTTGCTCTTCCTGTTTTTGGTACAGGGTTTAATAAAGGGGCTAAATAAATCATTATTACAGGAAACAAAACTTTGGAGGAAGTCTAATAGTTGCTTTTTACCTGAAGGGAAATCTAATGTTTGGTTGGTTGAACATTTGAAAATTGAAAAATGATGGTAGTGCTTTCCCATTAAATGAATGGAAGCTTTTGCATATTATGGTGTCTCTATAAACGTTTTGATACTACATTGTTGGTGGCTTTGCAGGAATGGATAATATGATGTTAGTGTTAGGCATTGAAGGGTTCTACTGATTGATTCTAATGCAAAATAGAGTTTACAAATGCTCAGTCTTCCAATAGTTTTGATATCACATTTTGGTGTCTCTATATGATTGAGAAATACATTGTTAGTGTTAGATATTGAAGATTACTCTAATGTTGCTAATGGTTGAATTAATATCAGCAAATTGGCGGTCGAACTGTTCGGGTGAACTTCCCTGAAGTTCCTAGGGGAGGAGAAAAGGAAGTCATGGGACCAAAGATAAGAAGCAGCTATAACAAATTTGTAGATAGTCCTCATAAGATATATGCAGGAAATCTCGGTTGGGGCCTTAATTCTCAGAGTCTTAGAGATGCTTTTGCAGAGCAGCCAGGGTTATTGAGTGCTAAGGTCATCTATGATAGAGCATCTGGAAGAAGTCGAGGTTTTGGGTTTGTATCTTTTGAAACTGCTCAGGATGCAGAGTCTGCTTTGGATTCCATGAATGGAGTGGTAAGAAAGTGGAGTTATTTTTTAATGGATGAGAATCTAAAATTAATTATTCAAATAGAATACTTGGCAACATGATTCTAGAGATTGGACAACTTGAACTTGTGACGGAATTTATTAATGTGATAGATCACTGCTACATAGTTATTTCTTAACTACCTCAAAATGCTCTCTGTACATGTATCGTGCAAACCAGATTTACATTATTTTTAGAAATAGCCATAAGAAAATGTACCTGCATTTTGTACATTCAAGCCTGAGTAATAGATACAAGTCATACATTGACCTCTTCCTATGCAAATATGAATCAGGAAGTTGAAGGGCGGCCACTTCGGTTGAACATGGCTGCAGGACGGGCTCCAACTTCTCCAGCAGCGTTCGAGAGAACTGAGAGTACCCTTAACAGTAGTCAATTGCTTACCAGTATCAGTGCCTGAAATCTGATGTTAATACTTGAGTTGGCTTGGAAATTGAACTGAAGCTGAAGGCTAGGGAAATTGTTCCGCAAATTGCATACCCTCAGGATTTCCCTAGCAATTCTCTTTCATTCCCTGCTCAGCCACCAATGTCTAGGAAGCCTAGATCTTTTGAATGA

mRNA sequence

ATGTCAGCTTCTGCTGTCTCAATGGCTGCTGCAGCTTCAGTTCCCTCTTCTTCACTCTGCAAGAGAGTCTTGAGCCTCTCGTTCACCCAACATTCCAGCCAAATTCCCTCCCATTTCTCTCCGAAACAGAAACCATTGAAGTTTCTCGAGCTCAGAATTCATTTACCCAACTTTTTCCCTCTTTCTTTCGCCTCTGCTTCTCATCTTTACAGTGCTCCACCTGCATTCGACGGGCTCGAAGTCTCCGACCCTGAAAAAGAAGACGCAGAGGTAGAAGAAGAAAGCCAAGAGGAAGAGGAGCAAAAGGCATCGGTATCTCGCGAAGCAGGGAGGCTTTATATCGGAAATTTACCATATGCTATGACCTCTTCCCAATTGACTGAGGTCTTCGCCGAAGCCGGTCGTGTGGTTTCTGTAGAGGTTATATATGACAAAGTTACAGATAGGAGCAGGGGATTTGCATTTGTGACAATGGCAACTCTGGAGGAAGCTAAAGAAGCAATTCGGATGTTTGATGGCTCTCAAATTGGCGGTCGAACTGTTCGGGTGAACTTCCCTGAAGTTCCTAGGGGAGGAGAAAAGGAAGTCATGGGACCAAAGATAAGAAGCAGCTATAACAAATTTGTAGATAGTCCTCATAAGATATATGCAGGAAATCTCGGTTGGGGCCTTAATTCTCAGAGTCTTAGAGATGCTTTTGCAGAGCAGCCAGGGTTATTGAGTGCTAAGGTCATCTATGATAGAGCATCTGGAAGAAGTCGAGGTTTTGGGTTTGTATCTTTTGAAACTGCTCAGGATGCAGAGTCTGCTTTGGATTCCATGAATGGAGTGGAAGTTGAAGGGCGGCCACTTCGGTTGAACATGGCTGCAGGACGGGCTCCAACTTCTCCAGCAGCGTTCGAGAGAACTGAGAGTACCCTTAACATTGGCTTGGAAATTGAACTGAAGCTGAAGGCTAGGGAAATTGTTCCGCAAATTGCATACCCTCAGGATTTCCCTAGCAATTCTCTTTCATTCCCTGCTCAGCCACCAATGTCTAGGAAGCCTAGATCTTTTGAATGA

Coding sequence (CDS)

ATGTCAGCTTCTGCTGTCTCAATGGCTGCTGCAGCTTCAGTTCCCTCTTCTTCACTCTGCAAGAGAGTCTTGAGCCTCTCGTTCACCCAACATTCCAGCCAAATTCCCTCCCATTTCTCTCCGAAACAGAAACCATTGAAGTTTCTCGAGCTCAGAATTCATTTACCCAACTTTTTCCCTCTTTCTTTCGCCTCTGCTTCTCATCTTTACAGTGCTCCACCTGCATTCGACGGGCTCGAAGTCTCCGACCCTGAAAAAGAAGACGCAGAGGTAGAAGAAGAAAGCCAAGAGGAAGAGGAGCAAAAGGCATCGGTATCTCGCGAAGCAGGGAGGCTTTATATCGGAAATTTACCATATGCTATGACCTCTTCCCAATTGACTGAGGTCTTCGCCGAAGCCGGTCGTGTGGTTTCTGTAGAGGTTATATATGACAAAGTTACAGATAGGAGCAGGGGATTTGCATTTGTGACAATGGCAACTCTGGAGGAAGCTAAAGAAGCAATTCGGATGTTTGATGGCTCTCAAATTGGCGGTCGAACTGTTCGGGTGAACTTCCCTGAAGTTCCTAGGGGAGGAGAAAAGGAAGTCATGGGACCAAAGATAAGAAGCAGCTATAACAAATTTGTAGATAGTCCTCATAAGATATATGCAGGAAATCTCGGTTGGGGCCTTAATTCTCAGAGTCTTAGAGATGCTTTTGCAGAGCAGCCAGGGTTATTGAGTGCTAAGGTCATCTATGATAGAGCATCTGGAAGAAGTCGAGGTTTTGGGTTTGTATCTTTTGAAACTGCTCAGGATGCAGAGTCTGCTTTGGATTCCATGAATGGAGTGGAAGTTGAAGGGCGGCCACTTCGGTTGAACATGGCTGCAGGACGGGCTCCAACTTCTCCAGCAGCGTTCGAGAGAACTGAGAGTACCCTTAACATTGGCTTGGAAATTGAACTGAAGCTGAAGGCTAGGGAAATTGTTCCGCAAATTGCATACCCTCAGGATTTCCCTAGCAATTCTCTTTCATTCCCTGCTCAGCCACCAATGTCTAGGAAGCCTAGATCTTTTGAATGA

Protein sequence

MSASAVSMAAAASVPSSSLCKRVLSLSFTQHSSQIPSHFSPKQKPLKFLELRIHLPNFFPLSFASASHLYSAPPAFDGLEVSDPEKEDAEVEEESQEEEEQKASVSREAGRLYIGNLPYAMTSSQLTEVFAEAGRVVSVEVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLNSQSLRDAFAEQPGLLSAKVIYDRASGRSRGFGFVSFETAQDAESALDSMNGVEVEGRPLRLNMAAGRAPTSPAAFERTESTLNIGLEIELKLKAREIVPQIAYPQDFPSNSLSFPAQPPMSRKPRSFE

Homology

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BLAST of Sgr018227.1 vs. NCBI nr
Match: XP_038904039.1 (33 kDa ribonucleoprotein, chloroplastic [Benincasa hispida])

HSP 1 Score: 491.5 bits (1264), Expect = 6.1e-135
Identity = 260/313 (83.07%), Postives = 281/313 (89.78%), Query Frame = 0


Query: 1   MSASAVSMAAAASVPSSSLCKRVLSLSFTQHSSQIPSHFSPKQKPLKFLELRIHLPNFFP 60
           MSAS+VSMAAAA+   SS       L FTQH +QIPSHFSPKQ PLK L L IHLPNF+P
Sbjct: 1   MSASSVSMAAAAAPSVSSSSPLSKKLFFTQHPNQIPSHFSPKQNPLKLLNLTIHLPNFYP 60

Query: 61  LSFASASHLYSAPPAFDGLEVSDPEKEDAEV-----EEESQEEEEQKASVSREAGRLYIG 120
           LSF+S SHL+S PPAFDGLEVSDPE E AE+     EEE+QEE+EQK SVSREAG+LYIG
Sbjct: 61  LSFSSPSHLHSVPPAFDGLEVSDPETEYAEIQESDAEEETQEEDEQKVSVSREAGKLYIG 120

Query: 121 NLPYAMTSSQLTEVFAEAGRVVSVEVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 180
           NLPYAMTSSQL+EVFAEAG VVSV+VIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ
Sbjct: 121 NLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 180

Query: 181 IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLNSQSLRDAFAE 240
           IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGL SQSLR+AF  
Sbjct: 181 IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLREAFEN 240

Query: 241 QPGLLSAKVIYDRASGRSRGFGFVSFETAQDAESALDSMNGVEVEGRPLRLNMAAGRAPT 300
           QPG+LSAKVIYDRASG+SRGFGFVSFETA+DAE AL+SMNGVEVEGRPLRLN+AAGRAPT
Sbjct: 241 QPGILSAKVIYDRASGKSRGFGFVSFETAEDAEFALESMNGVEVEGRPLRLNIAAGRAPT 300

Query: 301 SPAAFERTESTLN 309
           SPAAF RTE+T++
Sbjct: 301 SPAAFPRTENTID 313

[Close]

BLAST of Sgr018227.1 vs. NCBI nr
Match: XP_022151379.1 (RNA-binding protein CP33, chloroplastic [Momordica charantia])

HSP 1 Score: 488.0 bits (1255), Expect = 6.7e-134
Identity = 259/309 (83.82%), Postives = 282/309 (91.26%), Query Frame = 0


Query: 1   MSASAVSMAAAASVPSSSLCKRVLSLSF-TQHSSQIPSHFSPKQKPLKFLELRIHLPNFF 60
           MSASAVSMAAAASV SS  CK+V +LS   QHS+QIP HFSPKQKPLK LEL+I LPNF 
Sbjct: 1   MSASAVSMAAAASVSSSPXCKKVFNLSLPQQHSTQIPPHFSPKQKPLKLLELKIRLPNFH 60

Query: 61  PLSFASASHLYSAPPAFDGLEVSDPEKEDAEVEEESQEEEEQKASVSREAGRLYIGNLPY 120
           PLSF+SASHLY++PPAFD  E  + E E+ + + ESQEEEEQ  S SREAG+LYIGNLPY
Sbjct: 61  PLSFSSASHLYTSPPAFD--EEENAEDEELDGKSESQEEEEQTVSASREAGKLYIGNLPY 120

Query: 121 AMTSSQLTEVFAEAGRVVSVEVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGR 180
           AMTS QLTEVFAEAGRVVSV+VIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGR
Sbjct: 121 AMTSYQLTEVFAEAGRVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGR 180

Query: 181 TVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLNSQSLRDAFAEQPGL 240
           TVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGL SQSLR+AF +QPG+
Sbjct: 181 TVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLREAFEDQPGI 240

Query: 241 LSAKVIYDRASGRSRGFGFVSFETAQDAESALDSMNGVEVEGRPLRLNMAAGRAPTSPAA 300
           L AKVIYDRASGRSRGFGFVSFETA+DAESA++SMNGVEVEGRPLRLN+AAG+APTSPAA
Sbjct: 241 LGAKVIYDRASGRSRGFGFVSFETAEDAESAMNSMNGVEVEGRPLRLNIAAGQAPTSPAA 300

Query: 301 FERTESTLN 309
           FERT+STL+
Sbjct: 301 FERTKSTLD 307

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BLAST of Sgr018227.1 vs. NCBI nr
Match: XP_022934919.1 (33 kDa ribonucleoprotein, chloroplastic [Cucurbita moschata] >XP_022934920.1 33 kDa ribonucleoprotein, chloroplastic [Cucurbita moschata])

HSP 1 Score: 487.6 bits (1254), Expect = 8.8e-134
Identity = 257/313 (82.11%), Postives = 282/313 (90.10%), Query Frame = 0


Query: 1   MSASAVSMAAAASVPSSSLCKRVLSLSFTQHSSQIPSHFSPKQKPLKFLELRIHLPNFFP 60
           M+A+A S+++++S  SSS CK+   L F QH ++IPSHFSPKQKPLK LELRIHLPN +P
Sbjct: 8   MAAAAASVSSSSSSSSSSPCKK---LFFAQHLNRIPSHFSPKQKPLKLLELRIHLPNIYP 67

Query: 61  LSFASASHLYSAPPAFDGLEVSDPEKEDAEVE-----EESQEEEEQKASVSREAGRLYIG 120
           L+F+SASHLY APPAF+GLEVSDP  EDAE E     EES+EE+EQK S SR+AG+LYIG
Sbjct: 68  LAFSSASHLYCAPPAFEGLEVSDPITEDAETEESDGSEESREEDEQKVSASRDAGKLYIG 127

Query: 121 NLPYAMTSSQLTEVFAEAGRVVSVEVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 180
           NLPYAMTSSQLTEVFAEAG VVSV+VIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGS 
Sbjct: 128 NLPYAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSL 187

Query: 181 IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLNSQSLRDAFAE 240
           IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGL SQSLR+AF  
Sbjct: 188 IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLREAFEN 247

Query: 241 QPGLLSAKVIYDRASGRSRGFGFVSFETAQDAESALDSMNGVEVEGRPLRLNMAAGRAPT 300
           QPG+LSAKVIYDR SGRSRGFGFVSFETA+DAESALDSMNGVEVEGRPLRLNMAA RAPT
Sbjct: 248 QPGILSAKVIYDRESGRSRGFGFVSFETAEDAESALDSMNGVEVEGRPLRLNMAADRAPT 307

Query: 301 SPAAFERTESTLN 309
           SPAAF RTE+T++
Sbjct: 308 SPAAFTRTENTID 317

[Close]

BLAST of Sgr018227.1 vs. NCBI nr
Match: KAG6580756.1 (hypothetical protein SDJN03_20758, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 486.9 bits (1252), Expect = 1.5e-133
Identity = 262/321 (81.62%), Postives = 283/321 (88.16%), Query Frame = 0


Query: 1   MSASAVSMAAAA--------SVPSSSLCKRVLSLSFTQHSSQIPSHFSPKQKPLKFLELR 60
           MSAS+++MAAAA        S  SSS CK+   L F QH ++IPSHFSPKQKPLK LELR
Sbjct: 1   MSASSLTMAAAAASVSSSSSSSSSSSPCKK---LFFAQHLNRIPSHFSPKQKPLKLLELR 60

Query: 61  IHLPNFFPLSFASASHLYSAPPAFDGLEVSDPEKEDAEVE-----EESQEEEEQKASVSR 120
           IHLPN +PL+F+SASHLY APPAF+GLEVSDP  EDAE E     EES+EE+EQK S SR
Sbjct: 61  IHLPNIYPLAFSSASHLYCAPPAFEGLEVSDPITEDAETEESDGGEESREEDEQKVSASR 120

Query: 121 EAGRLYIGNLPYAMTSSQLTEVFAEAGRVVSVEVIYDKVTDRSRGFAFVTMATLEEAKEA 180
           +AG+LYIGNLPYAMTSSQLTEVFAEAG VVSV+VIYDKVTDRSRGFAFVTMATLEEAKEA
Sbjct: 121 DAGKLYIGNLPYAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEA 180

Query: 181 IRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLNSQ 240
           IRMFDGS IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGL SQ
Sbjct: 181 IRMFDGSLIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQ 240

Query: 241 SLRDAFAEQPGLLSAKVIYDRASGRSRGFGFVSFETAQDAESALDSMNGVEVEGRPLRLN 300
           SLR+AF  QPG+LSAKVIYDR SGRSRGFGFVSFETA+DAESALDSMNGVEVEGRPLRLN
Sbjct: 241 SLREAFENQPGILSAKVIYDRESGRSRGFGFVSFETAEDAESALDSMNGVEVEGRPLRLN 300

Query: 301 MAAGRAPTSPAAFERTESTLN 309
           MAA RAPTSPAAF RTE+T++
Sbjct: 301 MAADRAPTSPAAFTRTENTID 318

[Close]

BLAST of Sgr018227.1 vs. NCBI nr
Match: XP_023527627.1 (33 kDa ribonucleoprotein, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 485.7 bits (1249), Expect = 3.3e-133
Identity = 262/324 (80.86%), Postives = 283/324 (87.35%), Query Frame = 0


Query: 1   MSASAVSMAAAA-----------SVPSSSLCKRVLSLSFTQHSSQIPSHFSPKQKPLKFL 60
           MSAS+++MAAAA           S  SSS CK+   L F QH ++IPSHFSPKQKPLK L
Sbjct: 1   MSASSLTMAAAAASVSSSSSSSSSSSSSSPCKK---LFFAQHLNRIPSHFSPKQKPLKLL 60

Query: 61  ELRIHLPNFFPLSFASASHLYSAPPAFDGLEVSDPEKEDAEVE-----EESQEEEEQKAS 120
           ELRIHLPN +PL+F+SASHLY APPAF+GLEVSDP  EDAE E     EES+EE+EQK S
Sbjct: 61  ELRIHLPNIYPLAFSSASHLYCAPPAFEGLEVSDPITEDAETEESDGSEESREEDEQKVS 120

Query: 121 VSREAGRLYIGNLPYAMTSSQLTEVFAEAGRVVSVEVIYDKVTDRSRGFAFVTMATLEEA 180
            SR+AG+LYIGNLPYAMTSSQLTEVFAEAG VVSV+VIYDKVTDRSRGFAFVTMATLEEA
Sbjct: 121 ASRDAGKLYIGNLPYAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEA 180

Query: 181 KEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGL 240
           KEAIRMFDGS IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGL
Sbjct: 181 KEAIRMFDGSLIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGL 240

Query: 241 NSQSLRDAFAEQPGLLSAKVIYDRASGRSRGFGFVSFETAQDAESALDSMNGVEVEGRPL 300
            SQSLR+AF  QPG+LSAKVIYDR SGRSRGFGFVSFETA+DAESALDSMNGVEVEGRPL
Sbjct: 241 TSQSLREAFENQPGILSAKVIYDRESGRSRGFGFVSFETAEDAESALDSMNGVEVEGRPL 300

Query: 301 RLNMAAGRAPTSPAAFERTESTLN 309
           RLNMAA RAPTSPAAF RTE+T++
Sbjct: 301 RLNMAADRAPTSPAAFTRTENTID 321

[Close]

BLAST of Sgr018227.1 vs. ExPASy Swiss-Prot
Match: P19684 (33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 2.8e-82
Identity = 178/306 (58.17%), Postives = 218/306 (71.24%), Query Frame = 0


Query: 1   MSASAVSMAAAASVPSSSLCKRVLSLSFTQHSSQIPSHFSPKQKPLKFLELRIH---LPN 60
           MS    S AA AS  S+SL        FTQ       H S       F   +I+   L  
Sbjct: 1   MSGCCFSFAATASTSSTSLL-----YLFTQKPKFSVDHLSLSTYNTHF-NFKINSTKLKA 60

Query: 61  FFPLS--FASASHLYSAPPAFDGLEV--SDPEKE---DAEVEEESQEEEEQKASVSREAG 120
            FP+S  + S+  L +     DG+EV   D E+E    AE EEE +E+EE+  S S E G
Sbjct: 61  HFPISSLYRSSIFLSTCASVSDGVEVVQEDDEEEVALSAEEEEEIEEKEERVESESVEGG 120

Query: 121 RLYIGNLPYAMTSSQLTEVFAEAGRVVSVEVIYDKVTDRSRGFAFVTMATLEEAKEAIRM 180
           RLY+GNLP++MTSSQL+E+FAEAG V +VE++YD+VTDRSRGFAFVTM ++EEAKEAIR+
Sbjct: 121 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 180

Query: 181 FDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLNSQSLR 240
           FDGSQ+GGRTV+VNFPEVPRGGE+EVM  KIRS+Y  FVDSPHK+Y  NL W L SQ LR
Sbjct: 181 FDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLR 240

Query: 241 DAFAEQPGLLSAKVIYDRASGRSRGFGFVSFETAQDAESALDSMNGVEVEGRPLRLNMAA 297
           DAFA+QPG +SAKVIYDR+SGRSRGFGF++F +A+   SALD+MN VE+EGRPLRLN+A 
Sbjct: 241 DAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVAG 300

[Close]

BLAST of Sgr018227.1 vs. ExPASy Swiss-Prot
Match: Q39061 (RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP33 PE=2 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 4.2e-78
Identity = 172/337 (51.04%), Postives = 231/337 (68.55%), Query Frame = 0


Query: 3   ASAVSMAAAASVPSSSLCKRVLSLSFTQHSSQIPSHFSPKQKPLKFLELRIHLPNFFPLS 62
           +SAV+++AAA+  S++    +LS   +  +SQ+   F+PK       +L  + PN   L 
Sbjct: 7   SSAVAVSAAATASSAATFNPLLS---SHSNSQLFYRFTPKS-----FKLVANCPNPLILH 66

Query: 63  FASASHLY------SAPPAFDGLEVSDPEKEDAEVE----EESQEEEEQKASVSREAGRL 122
                H +       A  A D ++ S  E+E+ E E    EE  EEE+Q    S E GRL
Sbjct: 67  SNIRRHRFFCAAETEASSADDEIQASVEEEEEVEEEGDEGEEEVEEEKQTTQASGEEGRL 126

Query: 123 YIGNLPYAMTSSQLTEVFAEAGRVVSVEVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFD 182
           Y+GNLPY +TSS+L+++F EAG VV V+++YDKVTDRSRGF FVTM ++EEAKEA++MF+
Sbjct: 127 YVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFN 186

Query: 183 GSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLNSQSLRDA 242
            SQIGGRTV+VNFPEVPRGGE EVM  KIR +   +VDSPHK+YAGNLGW L SQ L+DA
Sbjct: 187 SSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLKDA 246

Query: 243 FAEQPGLLSAKVIYDRASGRSRGFGFVSFETAQDAESALDSMNGVEVEGRPLRLNMAAGR 302
           F +QPG+L AKVIY+R +GRSRGFGF+SFE+A++ +SAL +MNGVEVEGR LRLN+A+ R
Sbjct: 247 FGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLASER 306

Query: 303 -APT-SPAAFERTESTLNIGLEIELKLKAREIVPQIA 328
             PT SP + E  E+        E  L++ E++  ++
Sbjct: 307 EKPTVSPPSVEEGETE-------EASLESNEVLSNVS 328

[Close]

BLAST of Sgr018227.1 vs. ExPASy Swiss-Prot
Match: P49314 (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia OX=4092 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.8e-41
Identity = 113/293 (38.57%), Postives = 165/293 (56.31%), Query Frame = 0


Query: 23  VLSLSFTQHSSQIPSHFSPKQKPLKFLELRIHLPNFFPLSFASASHLYSAPP---AFD-- 82
           V SL F   +SQ PS   P    L F  L     N   LS +S  H  S  P   +F   
Sbjct: 6   VSSLQFLFVTSQTPSSLKP-NSTLSFFSLPSSSLN-LSLSSSSIGHSASIKPFESSFSTR 65

Query: 83  -GLEVSDPEKEDAEVEEESQEEEEQKASVSREAGRLYIGNLPYAMTSSQLTEVFAEAGRV 142
             L   D  ++D EV E+ +  E+ K         L++GNLP+++ S+ L  +F  AG V
Sbjct: 66  VALSDFDQLEDDVEVAEQPRFSEDLK---------LFVGNLPFSVDSAALAGLFERAGNV 125

Query: 143 VSVEVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVP------- 202
             VEVIYDK++ RSRGF FVTM+T EE + A + F+G +I GR +RVN    P       
Sbjct: 126 EIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSS 185

Query: 203 ----RGGEKEVMGPKIRSSY------NKFVDSPHKIYAGNLGWGLNSQSLRDAFAEQPGL 262
               RGG     G +  +S        + VDS +++Y GNL WG++  +L++ F+EQ  +
Sbjct: 186 FGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNV 245

Query: 263 LSAKVIYDRASGRSRGFGFVSFETAQDAESALDSMNGVEVEGRPLRLNMAAGR 293
           + AKV+YDR SGRSRGFGFV++ +A++   A+DS+NG++++GR +R++ A  R
Sbjct: 246 VDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEER 287

[Close]

BLAST of Sgr018227.1 vs. ExPASy Swiss-Prot
Match: Q08937 (29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.5e-40
Identity = 111/294 (37.76%), Postives = 164/294 (55.78%), Query Frame = 0


Query: 23  VLSLSFTQHSSQIPSHFSPKQKPLKFLELRIHLPNFFPLSFASASHLYSAPPAFD----- 82
           V SL F   + Q PS   P    L F  L     N   LS +S+S    +   F+     
Sbjct: 6   VSSLQFLFVTPQTPSSLKP-NSTLSFFSLPSSSLN---LSLSSSSTGLCSIKPFESSFST 65

Query: 83  --GLEVSDPEKEDAEVEEESQEEEEQKASVSREAGRLYIGNLPYAMTSSQLTEVFAEAGR 142
              L   D  ++D EV E+ +  E+ K         L++GNLP+++ S+ L  +F  AG 
Sbjct: 66  RVALSGFDQLEDDVEVAEQPRFSEDLK---------LFVGNLPFSVDSAALAGLFERAGN 125

Query: 143 VVSVEVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVP------ 202
           V  VEVIYDK+T RSRGF FVTM+T EE + A + F+G +I GR +RVN    P      
Sbjct: 126 VEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENS 185

Query: 203 -----RGGEKEVMGPKIRSSY------NKFVDSPHKIYAGNLGWGLNSQSLRDAFAEQPG 262
                RGG     G +  +S        + VDS +++Y GNL WG++  +L++ F+EQ  
Sbjct: 186 SFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGN 245

Query: 263 LLSAKVIYDRASGRSRGFGFVSFETAQDAESALDSMNGVEVEGRPLRLNMAAGR 293
           ++ AKV+YDR SGRSRGFGFV++ ++++   A+DS+NGV+++GR +R++ A  R
Sbjct: 246 VVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEER 286

[Close]

BLAST of Sgr018227.1 vs. ExPASy Swiss-Prot
Match: Q08935 (29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.0e-39
Identity = 103/274 (37.59%), Postives = 156/274 (56.93%), Query Frame = 0


Query: 26  LSFTQHSSQIPSHFSPKQKPLKFLELRIHLPNFFPLSFASASHLYSA-----PPAFDGLE 85
           LS T  +  +P   S +   L F  L    P+   LS +S+S  +S+         D  +
Sbjct: 11  LSLTPQTLPLPKPTS-QTTSLSFFSLP---PSSLNLSLSSSSSCFSSRFVRKVTLSDFDQ 70

Query: 86  VSDPEKEDAEVEEESQEEEEQKASVSREAGRLYIGNLPYAMTSSQLTEVFAEAGRVVSVE 145
           + D E  D  VEEE     + K         +++GNLP++  S+ L E+F  AG V  VE
Sbjct: 71  IEDVEDGDDGVEEERNFSPDLK---------IFVGNLPFSADSAALAELFERAGNVEMVE 130

Query: 146 VIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPK 205
           VIYDK+T RSRGF FVTM++ EE + A + F+G ++ GR +RVN    P   E       
Sbjct: 131 VIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGG 190

Query: 206 IRSSYNKFVDSPHKIYAGNLGWGLNSQSLRDAFAEQPGLLSAKVIYDRASGRSRGFGFVS 265
            R   +   DS +++Y GNL WG++  +L   F+EQ  ++ AKV+YDR SGRSRGFGFV+
Sbjct: 191 SRGGGS--FDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVT 250

Query: 266 FETAQDAESALDSMNGVEVEGRPLRLNMAAGRAP 295
           + +A++  +A++S++GV++ GR +R++ A  R P
Sbjct: 251 YSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPP 269

[Close]

BLAST of Sgr018227.1 vs. ExPASy TrEMBL
Match: A0A6J1DCX3 (RNA-binding protein CP33, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111019332 PE=4 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 3.2e-134
Identity = 259/309 (83.82%), Postives = 282/309 (91.26%), Query Frame = 0


Query: 1   MSASAVSMAAAASVPSSSLCKRVLSLSF-TQHSSQIPSHFSPKQKPLKFLELRIHLPNFF 60
           MSASAVSMAAAASV SS  CK+V +LS   QHS+QIP HFSPKQKPLK LEL+I LPNF 
Sbjct: 1   MSASAVSMAAAASVSSSPXCKKVFNLSLPQQHSTQIPPHFSPKQKPLKLLELKIRLPNFH 60

Query: 61  PLSFASASHLYSAPPAFDGLEVSDPEKEDAEVEEESQEEEEQKASVSREAGRLYIGNLPY 120
           PLSF+SASHLY++PPAFD  E  + E E+ + + ESQEEEEQ  S SREAG+LYIGNLPY
Sbjct: 61  PLSFSSASHLYTSPPAFD--EEENAEDEELDGKSESQEEEEQTVSASREAGKLYIGNLPY 120

Query: 121 AMTSSQLTEVFAEAGRVVSVEVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGR 180
           AMTS QLTEVFAEAGRVVSV+VIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGR
Sbjct: 121 AMTSYQLTEVFAEAGRVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGR 180

Query: 181 TVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLNSQSLRDAFAEQPGL 240
           TVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGL SQSLR+AF +QPG+
Sbjct: 181 TVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLREAFEDQPGI 240

Query: 241 LSAKVIYDRASGRSRGFGFVSFETAQDAESALDSMNGVEVEGRPLRLNMAAGRAPTSPAA 300
           L AKVIYDRASGRSRGFGFVSFETA+DAESA++SMNGVEVEGRPLRLN+AAG+APTSPAA
Sbjct: 241 LGAKVIYDRASGRSRGFGFVSFETAEDAESAMNSMNGVEVEGRPLRLNIAAGQAPTSPAA 300

Query: 301 FERTESTLN 309
           FERT+STL+
Sbjct: 301 FERTKSTLD 307

[Close]

BLAST of Sgr018227.1 vs. ExPASy TrEMBL
Match: A0A6J1F948 (33 kDa ribonucleoprotein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441950 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 4.2e-134
Identity = 257/313 (82.11%), Postives = 282/313 (90.10%), Query Frame = 0


Query: 1   MSASAVSMAAAASVPSSSLCKRVLSLSFTQHSSQIPSHFSPKQKPLKFLELRIHLPNFFP 60
           M+A+A S+++++S  SSS CK+   L F QH ++IPSHFSPKQKPLK LELRIHLPN +P
Sbjct: 8   MAAAAASVSSSSSSSSSSPCKK---LFFAQHLNRIPSHFSPKQKPLKLLELRIHLPNIYP 67

Query: 61  LSFASASHLYSAPPAFDGLEVSDPEKEDAEVE-----EESQEEEEQKASVSREAGRLYIG 120
           L+F+SASHLY APPAF+GLEVSDP  EDAE E     EES+EE+EQK S SR+AG+LYIG
Sbjct: 68  LAFSSASHLYCAPPAFEGLEVSDPITEDAETEESDGSEESREEDEQKVSASRDAGKLYIG 127

Query: 121 NLPYAMTSSQLTEVFAEAGRVVSVEVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 180
           NLPYAMTSSQLTEVFAEAG VVSV+VIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGS 
Sbjct: 128 NLPYAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSL 187

Query: 181 IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLNSQSLRDAFAE 240
           IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGL SQSLR+AF  
Sbjct: 188 IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLREAFEN 247

Query: 241 QPGLLSAKVIYDRASGRSRGFGFVSFETAQDAESALDSMNGVEVEGRPLRLNMAAGRAPT 300
           QPG+LSAKVIYDR SGRSRGFGFVSFETA+DAESALDSMNGVEVEGRPLRLNMAA RAPT
Sbjct: 248 QPGILSAKVIYDRESGRSRGFGFVSFETAEDAESALDSMNGVEVEGRPLRLNMAADRAPT 307

Query: 301 SPAAFERTESTLN 309
           SPAAF RTE+T++
Sbjct: 308 SPAAFTRTENTID 317

[Close]

BLAST of Sgr018227.1 vs. ExPASy TrEMBL
Match: A0A6J1J651 (33 kDa ribonucleoprotein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481694 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 8.0e-133
Identity = 255/313 (81.47%), Postives = 282/313 (90.10%), Query Frame = 0


Query: 1   MSASAVSMAAAASVPSSSLCKRVLSLSFTQHSSQIPSHFSPKQKPLKFLELRIHLPNFFP 60
           M+A+A S+++++S  SSS CK++    FTQ  ++IPSHFSPK KPLK LELRIHLPNF+P
Sbjct: 8   MAAAAASVSSSSSSSSSSPCKKL--FFFTQLPNRIPSHFSPKPKPLKLLELRIHLPNFYP 67

Query: 61  LSFASASHLYSAPPAFDGLEVSDPEKEDAEVE-----EESQEEEEQKASVSREAGRLYIG 120
           L+F+SASHLY APPAF+GLEVSDP  E+AE E     EES+EE+EQK S SR+AG+LYIG
Sbjct: 68  LAFSSASHLYCAPPAFEGLEVSDPISENAETEESDGKEESREEDEQKVSASRDAGKLYIG 127

Query: 121 NLPYAMTSSQLTEVFAEAGRVVSVEVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 180
           NLPYAMTSSQLTEVFAEAG VVSV+VIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGS 
Sbjct: 128 NLPYAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSL 187

Query: 181 IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLNSQSLRDAFAE 240
           IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGL SQSLR+AF  
Sbjct: 188 IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLREAFEN 247

Query: 241 QPGLLSAKVIYDRASGRSRGFGFVSFETAQDAESALDSMNGVEVEGRPLRLNMAAGRAPT 300
           QPG+LSAKVIYDR SGRSRGFGFVSFETA+DAESALDSMNGVEVEGRPLRLNMAA RAPT
Sbjct: 248 QPGILSAKVIYDRESGRSRGFGFVSFETAEDAESALDSMNGVEVEGRPLRLNMAADRAPT 307

Query: 301 SPAAFERTESTLN 309
           SPAAF RTE+T++
Sbjct: 308 SPAAFTRTENTID 318

[Close]

BLAST of Sgr018227.1 vs. ExPASy TrEMBL
Match: A0A1S3B7N1 (33 kDa ribonucleoprotein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486688 PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 8.3e-130
Identity = 249/310 (80.32%), Postives = 274/310 (88.39%), Query Frame = 0


Query: 4   SAVSMAAAASVPSSSLCKRVLSLSFTQHSSQIPSHFSPKQKPLKFLELRIHLPNFFPLSF 63
           SA S+AAAA+  S+S         FTQH +QIPSHFSPK   LK L L IHLPNF+PLSF
Sbjct: 2   SAYSLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPKHNKLKLLNLTIHLPNFYPLSF 61

Query: 64  ASASHLYSAPPAFDGLEVSDPEKEDAEV-----EEESQEEEEQKASVSREAGRLYIGNLP 123
           +S SH++ APPAFD LE+SDPE E  +V     EE++QEE+EQK SVSREAG+LYIGNLP
Sbjct: 62  SSVSHIHCAPPAFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSREAGKLYIGNLP 121

Query: 124 YAMTSSQLTEVFAEAGRVVSVEVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG 183
           YAMTSSQL+EVFAEAG+VVSV+VIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG
Sbjct: 122 YAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG 181

Query: 184 RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLNSQSLRDAFAEQPG 243
           RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGL SQSLRDAF  QPG
Sbjct: 182 RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPG 241

Query: 244 LLSAKVIYDRASGRSRGFGFVSFETAQDAESALDSMNGVEVEGRPLRLNMAAGRAPTSPA 303
           +LSAKVIYDRASG+SRGFGFVSFETA+DAESAL+SMNGVEVEGRPLRLN+AA RAPTSPA
Sbjct: 242 ILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAERAPTSPA 301

Query: 304 AFERTESTLN 309
           AF RTE+T++
Sbjct: 302 AFPRTENTID 311

[Close]

BLAST of Sgr018227.1 vs. ExPASy TrEMBL
Match: A0A5D3DPZ1 (33 kDa ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004690 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 1.1e-129
Identity = 249/310 (80.32%), Postives = 274/310 (88.39%), Query Frame = 0


Query: 4   SAVSMAAAASVPSSSLCKRVLSLSFTQHSSQIPSHFSPKQKPLKFLELRIHLPNFFPLSF 63
           SA S+AAAA+  S+S         FTQH +QIPSHFSPK   LK L L IHLPNF+PLSF
Sbjct: 2   SAYSLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPKHNKLKLLNLTIHLPNFYPLSF 61

Query: 64  ASASHLYSAPPAFDGLEVSDPEKEDAEV-----EEESQEEEEQKASVSREAGRLYIGNLP 123
           +S SH++ APPAFD LE+SDPE E  +V     EE++QEE+EQK SVSREAG+LYIGNLP
Sbjct: 62  SSVSHVHCAPPAFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSREAGKLYIGNLP 121

Query: 124 YAMTSSQLTEVFAEAGRVVSVEVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG 183
           YAMTSSQL+EVFAEAG+VVSV+VIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG
Sbjct: 122 YAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG 181

Query: 184 RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLNSQSLRDAFAEQPG 243
           RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGL SQSLRDAF  QPG
Sbjct: 182 RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPG 241

Query: 244 LLSAKVIYDRASGRSRGFGFVSFETAQDAESALDSMNGVEVEGRPLRLNMAAGRAPTSPA 303
           +LSAKVIYDRASG+SRGFGFVSFETA+DAESAL+SMNGVEVEGRPLRLN+AA RAPTSPA
Sbjct: 242 ILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAERAPTSPA 301

Query: 304 AFERTESTLN 309
           AF RTE+T++
Sbjct: 302 AFPRTENTID 311

[Close]

BLAST of Sgr018227.1 vs. TAIR 10
Match: AT3G52380.1 (chloroplast RNA-binding protein 33 )

HSP 1 Score: 293.1 bits (749), Expect = 3.0e-79
Identity = 172/337 (51.04%), Postives = 231/337 (68.55%), Query Frame = 0


Query: 3   ASAVSMAAAASVPSSSLCKRVLSLSFTQHSSQIPSHFSPKQKPLKFLELRIHLPNFFPLS 62
           +SAV+++AAA+  S++    +LS   +  +SQ+   F+PK       +L  + PN   L 
Sbjct: 7   SSAVAVSAAATASSAATFNPLLS---SHSNSQLFYRFTPKS-----FKLVANCPNPLILH 66

Query: 63  FASASHLY------SAPPAFDGLEVSDPEKEDAEVE----EESQEEEEQKASVSREAGRL 122
                H +       A  A D ++ S  E+E+ E E    EE  EEE+Q    S E GRL
Sbjct: 67  SNIRRHRFFCAAETEASSADDEIQASVEEEEEVEEEGDEGEEEVEEEKQTTQASGEEGRL 126

Query: 123 YIGNLPYAMTSSQLTEVFAEAGRVVSVEVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFD 182
           Y+GNLPY +TSS+L+++F EAG VV V+++YDKVTDRSRGF FVTM ++EEAKEA++MF+
Sbjct: 127 YVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFN 186

Query: 183 GSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLNSQSLRDA 242
            SQIGGRTV+VNFPEVPRGGE EVM  KIR +   +VDSPHK+YAGNLGW L SQ L+DA
Sbjct: 187 SSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLKDA 246

Query: 243 FAEQPGLLSAKVIYDRASGRSRGFGFVSFETAQDAESALDSMNGVEVEGRPLRLNMAAGR 302
           F +QPG+L AKVIY+R +GRSRGFGF+SFE+A++ +SAL +MNGVEVEGR LRLN+A+ R
Sbjct: 247 FGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLASER 306

Query: 303 -APT-SPAAFERTESTLNIGLEIELKLKAREIVPQIA 328
             PT SP + E  E+        E  L++ E++  ++
Sbjct: 307 EKPTVSPPSVEEGETE-------EASLESNEVLSNVS 328

[Close]

BLAST of Sgr018227.1 vs. TAIR 10
Match: AT2G37220.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 157.9 bits (398), Expect = 1.5e-38
Identity = 87/218 (39.91%), Postives = 138/218 (63.30%), Query Frame = 0


Query: 90  EVEEESQEEEEQKASVSREAG-RLYIGNLPYAMTSSQLTEVFAEAGRVVSVEVIYDKVTD 149
           EVEE+   +       S  A  +L++GNLP+ + S+QL ++F  AG V  VEVIYDK+T 
Sbjct: 70  EVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITG 129

Query: 150 RSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNF-PEVPRGGEKEVMGPKIRSSYNK 209
           RSRGF FVTM+++ E + A + F+G ++ GR +RVN  P  P+  +    GP  RSS+  
Sbjct: 130 RSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGP--RSSFGS 189

Query: 210 F-----------VDSPHKIYAGNLGWGLNSQSLRDAFAEQPGLLSAKVIYDRASGRSRGF 269
                         S +++Y GNL WG++  +L   F+EQ  ++ A+VIYDR SGRS+GF
Sbjct: 190 SGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGF 249

Query: 270 GFVSFETAQDAESALDSMNGVEVEGRPLRLNMAAGRAP 295
           GFV+++++Q+ ++A+ S++G +++GR +R++ A  R P
Sbjct: 250 GFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPP 285

[Close]

BLAST of Sgr018227.1 vs. TAIR 10
Match: AT3G53460.1 (chloroplast RNA-binding protein 29 )

HSP 1 Score: 142.9 bits (359), Expect = 4.9e-34
Identity = 107/331 (32.33%), Postives = 162/331 (48.94%), Query Frame = 0


Query: 37  SHFSPKQKPL------------KFLELRIHLPNFFPLSFASASHLYSAPPAFDGLEVSD- 96
           S F+PK  PL              L  ++H  +   + FAS++   S+P  +    V + 
Sbjct: 9   SAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSI-FASSALKCSSPAEYPSRFVRNV 68

Query: 97  PEKEDAEVEEESQ-EEEEQKASVSREAG----RLYIGNLPYAMTSSQLTEVFAEAGRVVS 156
               D EVEE+    + +  A V R +     +L++GNL + + S+QL ++F  AG V  
Sbjct: 69  AVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEM 128

Query: 157 VEVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNF-PEVPRGGEKEVM 216
           VEVIYDKVT RSRGF FVTM+T  E + A + F+G +  GR +RVN  P  P+  E    
Sbjct: 129 VEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREESFSR 188

Query: 217 GPKI------------------------------------------------RSSY---- 276
           GP+                                                 RSSY    
Sbjct: 189 GPRSGGYGSERGGGYGSERGGGYGSERGGGYGSERGGGYGSQRSGGGYGGSQRSSYGSGS 248

Query: 277 --NKFVDSPHKIYAGNLGWGLNSQSLRDAFAEQPGLLSAKVIYDRASGRSRGFGFVSFET 295
                  S +++Y GNL WG++  +L + F EQ  ++ A+VIYDR SGRS+GFGFV+  +
Sbjct: 249 GSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSS 308

[Close]

BLAST of Sgr018227.1 vs. TAIR 10
Match: AT3G53460.2 (chloroplast RNA-binding protein 29 )

HSP 1 Score: 142.9 bits (359), Expect = 4.9e-34
Identity = 107/331 (32.33%), Postives = 162/331 (48.94%), Query Frame = 0


Query: 37  SHFSPKQKPL------------KFLELRIHLPNFFPLSFASASHLYSAPPAFDGLEVSD- 96
           S F+PK  PL              L  ++H  +   + FAS++   S+P  +    V + 
Sbjct: 9   SAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSI-FASSALKCSSPAEYPSRFVRNV 68

Query: 97  PEKEDAEVEEESQ-EEEEQKASVSREAG----RLYIGNLPYAMTSSQLTEVFAEAGRVVS 156
               D EVEE+    + +  A V R +     +L++GNL + + S+QL ++F  AG V  
Sbjct: 69  AVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEM 128

Query: 157 VEVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNF-PEVPRGGEKEVM 216
           VEVIYDKVT RSRGF FVTM+T  E + A + F+G +  GR +RVN  P  P+  E    
Sbjct: 129 VEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREESFSR 188

Query: 217 GPKI------------------------------------------------RSSY---- 276
           GP+                                                 RSSY    
Sbjct: 189 GPRSGGYGSERGGGYGSERGGGYGSERGGGYGSERGGGYGSQRSGGGYGGSQRSSYGSGS 248

Query: 277 --NKFVDSPHKIYAGNLGWGLNSQSLRDAFAEQPGLLSAKVIYDRASGRSRGFGFVSFET 295
                  S +++Y GNL WG++  +L + F EQ  ++ A+VIYDR SGRS+GFGFV+  +
Sbjct: 249 GSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSS 308

[Close]

BLAST of Sgr018227.1 vs. TAIR 10
Match: AT3G53460.3 (chloroplast RNA-binding protein 29 )

HSP 1 Score: 142.9 bits (359), Expect = 4.9e-34
Identity = 107/331 (32.33%), Postives = 162/331 (48.94%), Query Frame = 0


Query: 37  SHFSPKQKPL------------KFLELRIHLPNFFPLSFASASHLYSAPPAFDGLEVSD- 96
           S F+PK  PL              L  ++H  +   + FAS++   S+P  +    V + 
Sbjct: 9   SAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSI-FASSALKCSSPAEYPSRFVRNV 68

Query: 97  PEKEDAEVEEESQ-EEEEQKASVSREAG----RLYIGNLPYAMTSSQLTEVFAEAGRVVS 156
               D EVEE+    + +  A V R +     +L++GNL + + S+QL ++F  AG V  
Sbjct: 69  AVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEM 128

Query: 157 VEVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNF-PEVPRGGEKEVM 216
           VEVIYDKVT RSRGF FVTM+T  E + A + F+G +  GR +RVN  P  P+  E    
Sbjct: 129 VEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREESFSR 188

Query: 217 GPKI------------------------------------------------RSSY---- 276
           GP+                                                 RSSY    
Sbjct: 189 GPRSGGYGSERGGGYGSERGGGYGSERGGGYGSERGGGYGSQRSGGGYGGSQRSSYGSGS 248

Query: 277 --NKFVDSPHKIYAGNLGWGLNSQSLRDAFAEQPGLLSAKVIYDRASGRSRGFGFVSFET 295
                  S +++Y GNL WG++  +L + F EQ  ++ A+VIYDR SGRS+GFGFV+  +
Sbjct: 249 GSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSS 308

The following BLAST results are available for this feature:

BLAST of Sgr018227.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904039.1	6.1e-135	83.07	33 kDa ribonucleoprotein, chloroplastic [Benincasa hispida]	[more]
XP_022151379.1	6.7e-134	83.82	RNA-binding protein CP33, chloroplastic [Momordica charantia]	[more]
XP_022934919.1	8.8e-134	82.11	33 kDa ribonucleoprotein, chloroplastic [Cucurbita moschata] >XP_022934920.1 33 ...	[more]
KAG6580756.1	1.5e-133	81.62	hypothetical protein SDJN03_20758, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023527627.1	3.3e-133	80.86	33 kDa ribonucleoprotein, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sgr018227.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P19684	2.8e-82	58.17	33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=...	[more]
Q39061	4.2e-78	51.04	RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP33 ...	[more]
P49314	1.8e-41	38.57	31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia OX=4092 PE=...	[more]
Q08937	1.5e-40	37.76	29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=2 S...	[more]
Q08935	5.0e-39	37.59	29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=2 S...	[more]

BLAST of Sgr018227.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DCX3	3.2e-134	83.82	RNA-binding protein CP33, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1F948	4.2e-134	82.11	33 kDa ribonucleoprotein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1J651	8.0e-133	81.47	33 kDa ribonucleoprotein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481...	[more]
A0A1S3B7N1	8.3e-130	80.32	33 kDa ribonucleoprotein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486688 ...	[more]
A0A5D3DPZ1	1.1e-129	80.32	33 kDa ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of Sgr018227.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52380.1	3.0e-79	51.04	chloroplast RNA-binding protein 33	[more]
AT2G37220.1	1.5e-38	39.91	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G53460.1	4.9e-34	32.33	chloroplast RNA-binding protein 29	[more]
AT3G53460.2	4.9e-34	32.33	chloroplast RNA-binding protein 29	[more]
AT3G53460.3	4.9e-34	32.33	chloroplast RNA-binding protein 29	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 88..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 333..353
None	No IPR available	PANTHER	PTHR48025	OS02G0815200 PROTEIN	coord: 1..302
None	No IPR available	PANTHER	PTHR48025:SF11	RNA-BINDING PROTEIN CP33, CHLOROPLASTIC	coord: 1..302
None	No IPR available	CDD	cd12399	RRM_HP0827_like	coord: 111..187 e-value: 3.67242E-34 score: 118.87
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 111..184 e-value: 1.3E-27 score: 107.7 coord: 214..287 e-value: 1.2E-23 score: 94.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 215..285 e-value: 6.7E-17 score: 61.1 coord: 112..182 e-value: 4.2E-20 score: 71.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 110..188 score: 19.570105
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 213..291 score: 18.222727
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 77..194 e-value: 1.9E-30 score: 107.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 195..301 e-value: 3.2E-23 score: 84.2
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 208..296
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 104..186

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sgr018227	Sgr018227	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sgr018227.1.exon5	Sgr018227.1.exon5	exon
Sgr018227.1.exon4	Sgr018227.1.exon4	exon
Sgr018227.1.exon3	Sgr018227.1.exon3	exon
Sgr018227.1.exon2	Sgr018227.1.exon2	exon
Sgr018227.1.exon1	Sgr018227.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Sgr018227.1	cds.Sgr018227.1_5	CDS
cds.Sgr018227.1	cds.Sgr018227.1_4	CDS
cds.Sgr018227.1	cds.Sgr018227.1_3	CDS
cds.Sgr018227.1	cds.Sgr018227.1_2	CDS
cds.Sgr018227.1	cds.Sgr018227.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sgr018227.1	Sgr018227.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1901259	chloroplast rRNA processing
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003729	mRNA binding