Sed0027656.1 (mRNA) Chayote v1

Overview


Name	Sed0027656.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	S-protein homolog
Location	LG01: 12474287 .. 12474721 (-)
Sequence length	435
RNA-Seq Expression	Sed0027656.1
Synteny	Sed0027656.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCCTCTAAACGTAATTTGTTACATCTTATTGTTTGGTTTGGAATCAAACATTATGAAGCCATGTTTTGCAGCATCAAAAATACAAGCTCCATTTTCCCAATGGCAAGTGACCATTGTGAATGAGATGAGAGATTCGAATATGGTGGTTCACTGCAAGTCGAAAGACGACGATTTGGGCAAGCGCAATCTCGGTGCTGCAGCCAAATTCAACTGGACGTTTCGAGAAAATATTTTGCAATCAACACTATTTTGGTGCAATTTTAAGAGCAAACATGGAAAAGCTTCTGGTATTGTTTTCTGGCCAGAGAAAGGAAAATGGCTTAGTGAAAAATGTGATGATAAGAACTGTATTTGGGTTGGTGGAGATCAAGGAATTTATTTGCATCTTGGTCCTCAAAGAGGCTTTAAATTCGTGTACCCATGGAAATGA

mRNA sequence

ATGAAGCCTCTAAACGTAATTTGTTACATCTTATTGTTTGGTTTGGAATCAAACATTATGAAGCCATGTTTTGCAGCATCAAAAATACAAGCTCCATTTTCCCAATGGCAAGTGACCATTGTGAATGAGATGAGAGATTCGAATATGGTGGTTCACTGCAAGTCGAAAGACGACGATTTGGGCAAGCGCAATCTCGGTGCTGCAGCCAAATTCAACTGGACGTTTCGAGAAAATATTTTGCAATCAACACTATTTTGGTGCAATTTTAAGAGCAAACATGGAAAAGCTTCTGGTATTGTTTTCTGGCCAGAGAAAGGAAAATGGCTTAGTGAAAAATGTGATGATAAGAACTGTATTTGGGTTGGTGGAGATCAAGGAATTTATTTGCATCTTGGTCCTCAAAGAGGCTTTAAATTCGTGTACCCATGGAAATGA

Coding sequence (CDS)

ATGAAGCCTCTAAACGTAATTTGTTACATCTTATTGTTTGGTTTGGAATCAAACATTATGAAGCCATGTTTTGCAGCATCAAAAATACAAGCTCCATTTTCCCAATGGCAAGTGACCATTGTGAATGAGATGAGAGATTCGAATATGGTGGTTCACTGCAAGTCGAAAGACGACGATTTGGGCAAGCGCAATCTCGGTGCTGCAGCCAAATTCAACTGGACGTTTCGAGAAAATATTTTGCAATCAACACTATTTTGGTGCAATTTTAAGAGCAAACATGGAAAAGCTTCTGGTATTGTTTTCTGGCCAGAGAAAGGAAAATGGCTTAGTGAAAAATGTGATGATAAGAACTGTATTTGGGTTGGTGGAGATCAAGGAATTTATTTGCATCTTGGTCCTCAAAGAGGCTTTAAATTCGTGTACCCATGGAAATGA

Protein sequence

MKPLNVICYILLFGLESNIMKPCFAASKIQAPFSQWQVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDKNCIWVGGDQGIYLHLGPQRGFKFVYPWK

Homology

[Close]

BLAST of Sed0027656.1 vs. NCBI nr
Match: XP_023001658.1 (S-protein homolog 74-like [Cucurbita maxima])

HSP 1 Score: 172.6 bits (436), Expect = 2.5e-39
Identity = 77/148 (52.03%), Postives = 104/148 (70.27%), Query Frame = 0


Query: 1   MKPLNVICYILLFGLESN-IMKPCFA---ASKIQAPFSQWQVTIVNEMRDSNMVVHCKSK 60
           M+ +N +C+ILL GL SN +MKPCFA    SK+Q PFS+WQVTI N M DS ++VHCKSK
Sbjct: 1   MESVNPLCFILLLGLGSNMLMKPCFAQPTESKVQLPFSRWQVTIYNHMIDSTLMVHCKSK 60

Query: 61  DDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDK 120
           D+DLG+  +     +   F+ENI Q+T FWC+F SK+G+ +G VFWPE+G  LS++C+D 
Sbjct: 61  DNDLGRHEIKQGDNYFLKFKENIWQTTQFWCHFSSKYGQVTGDVFWPEEGSRLSDECNDH 120

Query: 121 NCIWVGGDQGIYLHLGPQRGFKFVYPWK 145
           NC+W   D GI+L  G    ++  YPWK
Sbjct: 121 NCVWSAQDGGIFLLRGSINSYQLAYPWK 148

[Close]

BLAST of Sed0027656.1 vs. NCBI nr
Match: XP_022954425.1 (S-protein homolog 74-like [Cucurbita moschata])

HSP 1 Score: 161.8 bits (408), Expect = 4.5e-36
Identity = 70/128 (54.69%), Postives = 90/128 (70.31%), Query Frame = 0


Query: 19  IMKPCFAA--SKIQAPFSQWQVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFR 78
           I+  CFA   S +   FS W+V IVN+++DS +VVHCKSKDDDLG+  + A  K+ W F 
Sbjct: 2   IINSCFAQSDSSLIDQFSNWEVDIVNDLKDSTLVVHCKSKDDDLGEHVIKAGDKYFWKFH 61

Query: 79  ENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDKNCIWVGGDQGIYLHLGPQRG 138
           EN+LQ+TL+WCNF SK G+ASG VFWPEK  WLS++C+   CIWV  D GI + LG    
Sbjct: 62  ENVLQTTLYWCNFSSKRGQASGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRLGAFGL 121

Query: 139 FKFVYPWK 145
           ++ VYPWK
Sbjct: 122 YELVYPWK 129

[Close]

BLAST of Sed0027656.1 vs. NCBI nr
Match: XP_022954429.1 (S-protein homolog 74-like [Cucurbita moschata])

HSP 1 Score: 157.9 bits (398), Expect = 6.5e-35
Identity = 68/128 (53.12%), Postives = 88/128 (68.75%), Query Frame = 0


Query: 19  IMKPCFAA--SKIQAPFSQWQVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFR 78
           I+  CFA   S +   FS W+V IVN+++DS +V HCKSKDDDLG+  +    K+ W F 
Sbjct: 2   IINSCFAQSDSSLIDQFSNWEVDIVNDLKDSTLVAHCKSKDDDLGEHVIKPGDKYFWKFH 61

Query: 79  ENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDKNCIWVGGDQGIYLHLGPQRG 138
           EN+LQ+TL+WCNF SK G+ASG VFWPEK  WLS++C+   CIWV  D GI + LG    
Sbjct: 62  ENVLQTTLYWCNFSSKRGQASGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRLGVFGL 121

Query: 139 FKFVYPWK 145
           ++ VYPWK
Sbjct: 122 YELVYPWK 129

[Close]

BLAST of Sed0027656.1 vs. NCBI nr
Match: XP_022954427.1 (S-protein homolog 74-like [Cucurbita moschata])

HSP 1 Score: 154.8 bits (390), Expect = 5.5e-34
Identity = 67/128 (52.34%), Postives = 87/128 (67.97%), Query Frame = 0


Query: 19  IMKPCFAA--SKIQAPFSQWQVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFR 78
           I+  CFA   S +   FS W+V IVN+++DS +V HCKSKDDDLG+  +    K+ W F 
Sbjct: 2   IINSCFAQSDSSLIDQFSNWEVDIVNDLKDSTLVAHCKSKDDDLGEHVIKPGDKYFWKFH 61

Query: 79  ENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDKNCIWVGGDQGIYLHLGPQRG 138
           EN+LQ+TL+WCNF SK G+A G VFWPEK  WLS++C+   CIWV  D GI + LG    
Sbjct: 62  ENVLQTTLYWCNFSSKGGQAFGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRLGVFGL 121

Query: 139 FKFVYPWK 145
           ++ VYPWK
Sbjct: 122 YELVYPWK 129

[Close]

BLAST of Sed0027656.1 vs. NCBI nr
Match: XP_022137291.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 149.4 bits (376), Expect = 2.3e-32
Identity = 68/117 (58.12%), Postives = 82/117 (70.09%), Query Frame = 0


Query: 30  QAPFSQWQVTIVNEMRDS-NMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCN 89
           Q P S WQVTI N ++ S N+ VHCKSKDDDLG+  +    ++ W F+EN  Q+TLFWCN
Sbjct: 19  QWPGSHWQVTIRNYLKGSANLTVHCKSKDDDLGEHVIEFRGRYEWKFKENFWQTTLFWCN 78

Query: 90  FKSKHGKASGIVFWPEKGKWLSEKCDDKNCIWVG-GDQGIYLHLGPQRGFKFVYPWK 145
           FKS +G ASG VFWPEK  WL+ +CD  NCIWV  GDQGIYL   PQR F+  Y W+
Sbjct: 79  FKSMYGHASGEVFWPEKSDWLAYRCDFSNCIWVARGDQGIYLAHVPQRTFELKYRWQ 135

[Close]

BLAST of Sed0027656.1 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.0e-19
Identity = 47/125 (37.60%), Postives = 69/125 (55.20%), Query Frame = 0


Query: 7   ICYILLFGLESNIMKPCFAASKIQAP-FSQWQVTIVNEM-RDSNMVVHCKSKDDDLGKRN 66
           IC+ L+   + +++        I  P  S+WQVT+ N +     + +HCKSK++DLG  N
Sbjct: 11  ICFYLVLTCQDHVLARDTTTRDIVVPKISEWQVTVANGLTTGETLFIHCKSKENDLGDIN 70

Query: 67  LGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDKNCIWVGGD 126
           L    +F+W F EN+L STLFWC      G  +  VFW +    L  +CD KNC+W   +
Sbjct: 71  LKFLDRFSWNFGENMLHSTLFWCYMSKDDGHMNVKVFWDD--VILFHRCDWKNCVWTAKN 130

Query: 127 QGIYL 130
            G+YL
Sbjct: 131 DGLYL 133

[Close]

BLAST of Sed0027656.1 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.3e-19
Identity = 49/128 (38.28%), Postives = 69/128 (53.91%), Query Frame = 0


Query: 4   LNVICYILLFGLESNIMKPCFAASKIQAP-FSQWQVTIVNEM-RDSNMVVHCKSKDDDLG 63
           L  IC+ L    + +++        I  P  S+WQVT+VN +     + +HCKSK+DDLG
Sbjct: 8   LLAICFSLALTCQDHVLVGGTTTRDIIVPKISEWQVTVVNGLTTGETLFIHCKSKEDDLG 67

Query: 64  KRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDKNCIWV 123
           + NL    +F+W F EN+L ST FWC     +G  +  VFW +    L  +C  KNCIW 
Sbjct: 68  EINLKFRNRFSWNFGENMLHSTFFWCYMNKDNGHMNVNVFWDD--VILFHRCGWKNCIWT 127

Query: 124 GGDQGIYL 130
               G+YL
Sbjct: 128 AKTDGLYL 133

[Close]

BLAST of Sed0027656.1 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-09
Identity = 32/113 (28.32%), Postives = 52/113 (46.02%), Query Frame = 0


Query: 32  PFSQWQVTIVNEMRDS-NMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFK 91
           P S+  V I N++ +   ++ HCKSKDDDLG R L     ++++F       TL++C+F 
Sbjct: 44  PTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFS 103

Query: 92  SKHGKASGIVFWPEKGKWLSEKCDDKNCIWVGGDQGIYLHLGPQRGFKFVYPW 144
             +   S  ++   +      KC+   C+W     G        + F   YPW
Sbjct: 104 WPNESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of Sed0027656.1 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08
Identity = 39/108 (36.11%), Postives = 52/108 (48.15%), Query Frame = 0


Query: 37  QVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKA 96
           +VTI N+  D  + +HCKS+DDDLG   L     F W F  N   STL++C F    G+ 
Sbjct: 47  RVTIQND-NDYLLGIHCKSRDDDLGFHILAKGELFGWKFHVNFCYSTLYFCGF--SQGQM 106

Query: 97  SGIVFWPEKGKWLSEKCDDKNCIWVGGDQGIYLHL-GPQRGFKFVYPW 144
              VF   +      +C   NC W     GIY +   P +G+ F Y W
Sbjct: 107 KKGVFEIYRANRDFYRC--ANCTWKAEKDGIYGYSEDPVKGYLF-YNW 148

[Close]

BLAST of Sed0027656.1 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.2e-08
Identity = 44/152 (28.95%), Postives = 68/152 (44.74%), Query Frame = 0


Query: 4   LNVICYILLFGLESNIMKPCFAASKIQAPFSQWQVTIVNEMRD-SNMVVHCKSKDDDLGK 63
           ++V+   LL  +  + +KP    S ++    +  VTI N + D S + +HCKS DDDLG 
Sbjct: 9   VHVVVIYLLIQIAFSQVKP---GSDLKWSTLKSVVTITNRLGDGSTLKLHCKSADDDLGL 68

Query: 64  RNLGAAAKFNWTFRENILQS-TLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDKN---- 123
           + L     +++ FR +I+   TLF+C+F            WP + KW +   DD++    
Sbjct: 69  KILAPNGSWSFKFRPSIVPGVTLFFCHFT-----------WPGQSKWFNIYDDDRDGVRM 128

Query: 124 ------CIWVGGDQGIYLHLGPQRGFKFVYPW 144
                 CIW  G  G          F   Y W
Sbjct: 129 GIPCIYCIWDIGKYGPCRFSEIDDAFNICYDW 146

[Close]

BLAST of Sed0027656.1 vs. ExPASy TrEMBL
Match: A0A6J1KR58 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111495733 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.2e-39
Identity = 77/148 (52.03%), Postives = 104/148 (70.27%), Query Frame = 0


Query: 1   MKPLNVICYILLFGLESN-IMKPCFA---ASKIQAPFSQWQVTIVNEMRDSNMVVHCKSK 60
           M+ +N +C+ILL GL SN +MKPCFA    SK+Q PFS+WQVTI N M DS ++VHCKSK
Sbjct: 1   MESVNPLCFILLLGLGSNMLMKPCFAQPTESKVQLPFSRWQVTIYNHMIDSTLMVHCKSK 60

Query: 61  DDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDK 120
           D+DLG+  +     +   F+ENI Q+T FWC+F SK+G+ +G VFWPE+G  LS++C+D 
Sbjct: 61  DNDLGRHEIKQGDNYFLKFKENIWQTTQFWCHFSSKYGQVTGDVFWPEEGSRLSDECNDH 120

Query: 121 NCIWVGGDQGIYLHLGPQRGFKFVYPWK 145
           NC+W   D GI+L  G    ++  YPWK
Sbjct: 121 NCVWSAQDGGIFLLRGSINSYQLAYPWK 148

[Close]

BLAST of Sed0027656.1 vs. ExPASy TrEMBL
Match: A0A6J1GSD6 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456683 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.2e-36
Identity = 70/128 (54.69%), Postives = 90/128 (70.31%), Query Frame = 0


Query: 19  IMKPCFAA--SKIQAPFSQWQVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFR 78
           I+  CFA   S +   FS W+V IVN+++DS +VVHCKSKDDDLG+  + A  K+ W F 
Sbjct: 2   IINSCFAQSDSSLIDQFSNWEVDIVNDLKDSTLVVHCKSKDDDLGEHVIKAGDKYFWKFH 61

Query: 79  ENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDKNCIWVGGDQGIYLHLGPQRG 138
           EN+LQ+TL+WCNF SK G+ASG VFWPEK  WLS++C+   CIWV  D GI + LG    
Sbjct: 62  ENVLQTTLYWCNFSSKRGQASGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRLGAFGL 121

Query: 139 FKFVYPWK 145
           ++ VYPWK
Sbjct: 122 YELVYPWK 129

[Close]

BLAST of Sed0027656.1 vs. ExPASy TrEMBL
Match: A0A6J1GSZ3 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456688 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 3.1e-35
Identity = 68/128 (53.12%), Postives = 88/128 (68.75%), Query Frame = 0


Query: 19  IMKPCFAA--SKIQAPFSQWQVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFR 78
           I+  CFA   S +   FS W+V IVN+++DS +V HCKSKDDDLG+  +    K+ W F 
Sbjct: 2   IINSCFAQSDSSLIDQFSNWEVDIVNDLKDSTLVAHCKSKDDDLGEHVIKPGDKYFWKFH 61

Query: 79  ENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDKNCIWVGGDQGIYLHLGPQRG 138
           EN+LQ+TL+WCNF SK G+ASG VFWPEK  WLS++C+   CIWV  D GI + LG    
Sbjct: 62  ENVLQTTLYWCNFSSKRGQASGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRLGVFGL 121

Query: 139 FKFVYPWK 145
           ++ VYPWK
Sbjct: 122 YELVYPWK 129

[Close]

BLAST of Sed0027656.1 vs. ExPASy TrEMBL
Match: A0A6J1GQZ0 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456686 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.7e-34
Identity = 67/128 (52.34%), Postives = 87/128 (67.97%), Query Frame = 0


Query: 19  IMKPCFAA--SKIQAPFSQWQVTIVNEMRDSNMVVHCKSKDDDLGKRNLGAAAKFNWTFR 78
           I+  CFA   S +   FS W+V IVN+++DS +V HCKSKDDDLG+  +    K+ W F 
Sbjct: 2   IINSCFAQSDSSLIDQFSNWEVDIVNDLKDSTLVAHCKSKDDDLGEHVIKPGDKYFWKFH 61

Query: 79  ENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDKNCIWVGGDQGIYLHLGPQRG 138
           EN+LQ+TL+WCNF SK G+A G VFWPEK  WLS++C+   CIWV  D GI + LG    
Sbjct: 62  ENVLQTTLYWCNFSSKGGQAFGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRLGVFGL 121

Query: 139 FKFVYPWK 145
           ++ VYPWK
Sbjct: 122 YELVYPWK 129

[Close]

BLAST of Sed0027656.1 vs. ExPASy TrEMBL
Match: A0A6J1C659 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111008788 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.1e-32
Identity = 68/117 (58.12%), Postives = 82/117 (70.09%), Query Frame = 0


Query: 30  QAPFSQWQVTIVNEMRDS-NMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCN 89
           Q P S WQVTI N ++ S N+ VHCKSKDDDLG+  +    ++ W F+EN  Q+TLFWCN
Sbjct: 19  QWPGSHWQVTIRNYLKGSANLTVHCKSKDDDLGEHVIEFRGRYEWKFKENFWQTTLFWCN 78

Query: 90  FKSKHGKASGIVFWPEKGKWLSEKCDDKNCIWVG-GDQGIYLHLGPQRGFKFVYPWK 145
           FKS +G ASG VFWPEK  WL+ +CD  NCIWV  GDQGIYL   PQR F+  Y W+
Sbjct: 79  FKSMYGHASGEVFWPEKSDWLAYRCDFSNCIWVARGDQGIYLAHVPQRTFELKYRWQ 135

[Close]

BLAST of Sed0027656.1 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 97.8 bits (242), Expect = 7.4e-21
Identity = 47/125 (37.60%), Postives = 69/125 (55.20%), Query Frame = 0


Query: 7   ICYILLFGLESNIMKPCFAASKIQAP-FSQWQVTIVNEM-RDSNMVVHCKSKDDDLGKRN 66
           IC+ L+   + +++        I  P  S+WQVT+ N +     + +HCKSK++DLG  N
Sbjct: 11  ICFYLVLTCQDHVLARDTTTRDIVVPKISEWQVTVANGLTTGETLFIHCKSKENDLGDIN 70

Query: 67  LGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDKNCIWVGGD 126
           L    +F+W F EN+L STLFWC      G  +  VFW +    L  +CD KNC+W   +
Sbjct: 71  LKFLDRFSWNFGENMLHSTLFWCYMSKDDGHMNVKVFWDD--VILFHRCDWKNCVWTAKN 130

Query: 127 QGIYL 130
            G+YL
Sbjct: 131 DGLYL 133

[Close]

BLAST of Sed0027656.1 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 96.7 bits (239), Expect = 1.7e-20
Identity = 49/128 (38.28%), Postives = 69/128 (53.91%), Query Frame = 0


Query: 4   LNVICYILLFGLESNIMKPCFAASKIQAP-FSQWQVTIVNEM-RDSNMVVHCKSKDDDLG 63
           L  IC+ L    + +++        I  P  S+WQVT+VN +     + +HCKSK+DDLG
Sbjct: 8   LLAICFSLALTCQDHVLVGGTTTRDIIVPKISEWQVTVVNGLTTGETLFIHCKSKEDDLG 67

Query: 64  KRNLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDKNCIWV 123
           + NL    +F+W F EN+L ST FWC     +G  +  VFW +    L  +C  KNCIW 
Sbjct: 68  EINLKFRNRFSWNFGENMLHSTFFWCYMNKDNGHMNVNVFWDD--VILFHRCGWKNCIWT 127

Query: 124 GGDQGIYL 130
               G+YL
Sbjct: 128 AKTDGLYL 133

[Close]

BLAST of Sed0027656.1 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 63.5 bits (153), Expect = 1.6e-10
Identity = 32/113 (28.32%), Postives = 52/113 (46.02%), Query Frame = 0


Query: 32  PFSQWQVTIVNEMRDS-NMVVHCKSKDDDLGKRNLGAAAKFNWTFRENILQSTLFWCNFK 91
           P S+  V I N++ +   ++ HCKSKDDDLG R L     ++++F       TL++C+F 
Sbjct: 44  PTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFS 103

Query: 92  SKHGKASGIVFWPEKGKWLSEKCDDKNCIWVGGDQGIYLHLGPQRGFKFVYPW 144
             +   S  ++   +      KC+   C+W     G        + F   YPW
Sbjct: 104 WPNESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of Sed0027656.1 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 62.4 bits (150), Expect = 3.5e-10
Identity = 36/125 (28.80%), Postives = 59/125 (47.20%), Query Frame = 0


Query: 5   NVICYILLFGLESNIMKPCFAASKIQAPFSQWQVTIVNEMRDSNMV-VHCKSKDDDLGKR 64
           N+  + ++ GL       C   S       + +V + N++  S ++ VHC+SKDDDLG+ 
Sbjct: 3   NLFIFSIVIGL-------CIGVSNAFHEIGESKVVLSNQLEHSKLLKVHCRSKDDDLGEH 62

Query: 65  NLGAAAKFNWTFRENILQSTLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDKNCIWVGG 124
            L     + +TF +NI Q+T F C           + F   +  W   K  + +C W+G 
Sbjct: 63  ILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFKHHLDFVAYETSW--SKALEASCKWIGR 118

Query: 125 DQGIY 129
           + GIY
Sbjct: 123 EDGIY 118

[Close]

BLAST of Sed0027656.1 vs. TAIR 10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 59.7 bits (143), Expect = 2.2e-09
Identity = 44/152 (28.95%), Postives = 68/152 (44.74%), Query Frame = 0


Query: 4   LNVICYILLFGLESNIMKPCFAASKIQAPFSQWQVTIVNEMRD-SNMVVHCKSKDDDLGK 63
           ++V+   LL  +  + +KP    S ++    +  VTI N + D S + +HCKS DDDLG 
Sbjct: 9   VHVVVIYLLIQIAFSQVKP---GSDLKWSTLKSVVTITNRLGDGSTLKLHCKSADDDLGL 68

Query: 64  RNLGAAAKFNWTFRENILQS-TLFWCNFKSKHGKASGIVFWPEKGKWLSEKCDDKN---- 123
           + L     +++ FR +I+   TLF+C+F            WP + KW +   DD++    
Sbjct: 69  KILAPNGSWSFKFRPSIVPGVTLFFCHFT-----------WPGQSKWFNIYDDDRDGVRM 128

Query: 124 ------CIWVGGDQGIYLHLGPQRGFKFVYPW 144
                 CIW  G  G          F   Y W
Sbjct: 129 GIPCIYCIWDIGKYGPCRFSEIDDAFNICYDW 146

The following BLAST results are available for this feature:

BLAST of Sed0027656.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023001658.1	2.5e-39	52.03	S-protein homolog 74-like [Cucurbita maxima]	[more]
XP_022954425.1	4.5e-36	54.69	S-protein homolog 74-like [Cucurbita moschata]	[more]
XP_022954429.1	6.5e-35	53.13	S-protein homolog 74-like [Cucurbita moschata]	[more]
XP_022954427.1	5.5e-34	52.34	S-protein homolog 74-like [Cucurbita moschata]	[more]
XP_022137291.1	2.3e-32	58.12	S-protein homolog 1-like [Momordica charantia]	[more]

BLAST of Sed0027656.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2HQ46	1.0e-19	37.60	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
F4JLS0	2.3e-19	38.28	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
F4JLQ5	2.2e-09	28.32	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
P0DN92	1.4e-08	36.11	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]
F4JZG1	3.2e-08	28.95	S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1	[more]

BLAST of Sed0027656.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KR58	1.2e-39	52.03	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111495733 PE=3 SV=1	[more]
A0A6J1GSD6	2.2e-36	54.69	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456683 PE=3 SV=1	[more]
A0A6J1GSZ3	3.1e-35	53.13	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456688 PE=3 SV=1	[more]
A0A6J1GQZ0	2.7e-34	52.34	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456686 PE=3 SV=1	[more]
A0A6J1C659	1.1e-32	58.12	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111008788 PE=3 SV=1	[more]

BLAST of Sed0027656.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29035.1	7.4e-21	37.60	Plant self-incompatibility protein S1 family	[more]
AT4G16295.1	1.7e-20	38.28	S-protein homologue 1	[more]
AT4G16195.1	1.6e-10	28.32	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	3.5e-10	28.80	Plant self-incompatibility protein S1 family	[more]
AT5G12070.1	2.2e-09	28.95	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 37..143 e-value: 3.6E-22 score: 78.9
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 30..136
None	No IPR available	PANTHER	PTHR31232:SF34	PUTATIVE-RELATED	coord: 30..136

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0027656	Sed0027656	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0027656.1-exon	Sed0027656.1-exon-LG01:12474287..12474721	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0027656.1-cds	Sed0027656.1-cds-LG01:12474287..12474721	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0027656.1	Sed0027656.1-protein	polypeptide