Sed0027423.1 (mRNA) Chayote v1

Overview


Name	Sed0027423.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Protein of unknown function (DUF962)
Location	LG12: 30615410 .. 30617375 (+)
Sequence length	896
RNA-Seq Expression	Sed0027423.1
Synteny	Sed0027423.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTAACAAAAACCAACCCTTATAAACACTCGAATCATCTTCCCCTTTACACGCCTCGCCTCTTCTAAGAACCATTTTCAAGCAATTTTTTCATATTGGGGTTTCTCTATGGGGAAAAGTAGTGGATTGTTTGATTTGGAATGGAACTTTGCTCTCTATGGCGCTTATCACAGCAACCCACTCAACATTTTCATCCATGTCCTGTTTGTTTGGCCCCTTTTCTTTACCTCTCTTATGTATTTGTATTTCACCCCTTCTTTCTACACTTTTCCCAAATCCCCTTTTGGGATTGACCATGGTTTGGTTTTGAACTTTGGGTTTCTCTTCACTTTGATTTATGCTGCATTTTATGTGGCTTTTGATAAGAAAGCTGGTTCCATGGCTGCTTTGCTTTGTTTTTTTTGTTGGGTTGGAGCTAGTTTTTTTGCCAATAGACTTGGTTATTCTCAGACTTGCAAGGTAAATTTGGTCTTTCTCTTCAATTTAATTTTTTGGGTTCTTGCTTTTTTGCTGTTAATTTGTTTGTTTACTGATATTGATGGCGAGTGGGAATTATGTGTTGAAGCTTAATTTGATATAATCTGGTTAAAATTTGAAAGTTGTGTTGAAGCTTGACATCTAAGTGGGAGCAAGTTGGTTGGGGCCATGGCTGTTGGTTGATGATAGTTTGTTATTTAATTTAGAGCCATAACTACTAATAATGACCCAAGTCATCTCTTCATGGCCATACATTTGTCTTTTTCTGTACCCATATTTTTCAAAATCCAAAAATGTGAGGTCATAAAGATGGATAAGGTCCATAAGGATGCTTGGGTCCTTACTCTATTTTTATGACATGTCATCAGCCTCACCAGAATTTCAAGTCCAGTCCTTGAGAATTGGAAAACAGTTTCTGGACAATAGGAATTGCTTGATTTTTCATATGCCTACCTAGTTCTTTTAACTTATGCTAAATGGATTACTCTATAACCTATATGCTTTCTTTTCTTCAAGAAGTAATACGGATGAGACCCGAACTCTATTGAATTCAGAAATCGCCAAGATACAAACTAACCAAGTAATTGTAGGTCCTTGGAGCTTCTCATTCTTGAGAATACTCTCTCAAAGCCTAATGCCAAAATGGCCAAATTATTTGATACCTTTCTCCTTCCCTACTACCTCTGTTTATAACCTAACTCTAACAAACTCCCAACTATTTGCTAAAATACCCATATTTCTAATAACAATCCTCATATACTTCTAGTTCTCACTGTTTGTTGATGTGGTAGGAGAAAACTTTGATAAGTGGTATTATTCTCAAGTTAGAGTTTGTTTTATATTTATTTCATTTTTGTTGTCTATCAGGTAGTACTTGCTGCTCAGTTGTTTTGCTGGACTAATCAGTTTATAGGTCATGGAGTGTTTGAGGTTGGATAGGTTACTTCATCTCAGTTGATTAATTACATCTCTTCTTGAAACTAAAGTCTTTTAATTTAATTTTCTCTTTTTTTTAAAATAGAAACGAGCACCGGCTTTGTTCGACAACCTTGCACAAGCCTTTCTAATGGCTCCATTCTTTGTAATTTTGGAGGTATTCTTTCTTTCTCTGATTTTCCAATGTTCTAAGATTTGTTTTTAGGTGTGTATAATGTCGTAGCTTTGTTGTTTCTGTTGGTTGGTTGCAGGTTCTGCAAATTTTCTTCAAGTATGAACCTTATCCAGGATTCAGTGCAAGTGTTCAAGCAAAGATAGAAGAAGATATAAAAGAGTGGAAAGAAAAGAAGGAAAAGCTCTCATAGGTTGAATTGCCCTGTTAACGTAGTGTAAAAATAGCTACTTTCAGTTGAACATTTTGAAGTCTTTCAATGATATTATTGTACGCGTTCTGCTTTTTAACCTTACGGTGCAATTATAACGGGAGAGGTTATAATAACTTGTGTTGGAGTGGAGATTATTTTAACAGATATTATGATAACTTATGTTTGGG

mRNA sequence

TCTTAACAAAAACCAACCCTTATAAACACTCGAATCATCTTCCCCTTTACACGCCTCGCCTCTTCTAAGAACCATTTTCAAGCAATTTTTTCATATTGGGGTTTCTCTATGGGGAAAAGTAGTGGATTGTTTGATTTGGAATGGAACTTTGCTCTCTATGGCGCTTATCACAGCAACCCACTCAACATTTTCATCCATGTCCTGTTTGTTTGGCCCCTTTTCTTTACCTCTCTTATGTATTTGTATTTCACCCCTTCTTTCTACACTTTTCCCAAATCCCCTTTTGGGATTGACCATGGTTTGGTTTTGAACTTTGGGTTTCTCTTCACTTTGATTTATGCTGCATTTTATGTGGCTTTTGATAAGAAAGCTGGTTCCATGGCTGCTTTGCTTTGTTTTTTTTGTTGGGTTGGAGCTAGTTTTTTTGCCAATAGACTTGGTTATTCTCAGACTTGCAAGGTAGTACTTGCTGCTCAGTTGTTTTGCTGGACTAATCAGTTTATAGGTCATGGAGTGTTTGAGAAACGAGCACCGGCTTTGTTCGACAACCTTGCACAAGCCTTTCTAATGGCTCCATTCTTTGTAATTTTGGAGGTTCTGCAAATTTTCTTCAAGTATGAACCTTATCCAGGATTCAGTGCAAGTGTTCAAGCAAAGATAGAAGAAGATATAAAAGAGTGGAAAGAAAAGAAGGAAAAGCTCTCATAGGTTGAATTGCCCTGTTAACGTAGTGTAAAAATAGCTACTTTCAGTTGAACATTTTGAAGTCTTTCAATGATATTATTGTACGCGTTCTGCTTTTTAACCTTACGGTGCAATTATAACGGGAGAGGTTATAATAACTTGTGTTGGAGTGGAGATTATTTTAACAGATATTATGATAACTTATGTTTGGG

Coding sequence (CDS)

ATGGGGAAAAGTAGTGGATTGTTTGATTTGGAATGGAACTTTGCTCTCTATGGCGCTTATCACAGCAACCCACTCAACATTTTCATCCATGTCCTGTTTGTTTGGCCCCTTTTCTTTACCTCTCTTATGTATTTGTATTTCACCCCTTCTTTCTACACTTTTCCCAAATCCCCTTTTGGGATTGACCATGGTTTGGTTTTGAACTTTGGGTTTCTCTTCACTTTGATTTATGCTGCATTTTATGTGGCTTTTGATAAGAAAGCTGGTTCCATGGCTGCTTTGCTTTGTTTTTTTTGTTGGGTTGGAGCTAGTTTTTTTGCCAATAGACTTGGTTATTCTCAGACTTGCAAGGTAGTACTTGCTGCTCAGTTGTTTTGCTGGACTAATCAGTTTATAGGTCATGGAGTGTTTGAGAAACGAGCACCGGCTTTGTTCGACAACCTTGCACAAGCCTTTCTAATGGCTCCATTCTTTGTAATTTTGGAGGTTCTGCAAATTTTCTTCAAGTATGAACCTTATCCAGGATTCAGTGCAAGTGTTCAAGCAAAGATAGAAGAAGATATAAAAGAGTGGAAAGAAAAGAAGGAAAAGCTCTCATAG

Protein sequence

MGKSSGLFDLEWNFALYGAYHSNPLNIFIHVLFVWPLFFTSLMYLYFTPSFYTFPKSPFGIDHGLVLNFGFLFTLIYAAFYVAFDKKAGSMAALLCFFCWVGASFFANRLGYSQTCKVVLAAQLFCWTNQFIGHGVFEKRAPALFDNLAQAFLMAPFFVILEVLQIFFKYEPYPGFSASVQAKIEEDIKEWKEKKEKLS

Homology

[Close]

BLAST of Sed0027423.1 vs. NCBI nr
Match: XP_038880038.1 (2-hydroxy-palmitic acid dioxygenase MPO1 [Benincasa hispida])

HSP 1 Score: 353.2 bits (905), Expect = 1.5e-93
Identity = 176/199 (88.44%), Postives = 184/199 (92.46%), Query Frame = 0


Query: 1   MGKSSGLFDLEWNFALYGAYHSNPLNIFIHVLFVWPLFFTSLMYLYFTPSFYTFPKSPFG 60
           MGK SGLFDLE +FA YGAYHSNP+NIFIH+LFVWP+FFTSLMYLYFTPSFYT PKSP G
Sbjct: 1   MGK-SGLFDLERHFAFYGAYHSNPVNIFIHILFVWPIFFTSLMYLYFTPSFYTIPKSPCG 60

Query: 61  IDHGLVLNFGFLFTLIYAAFYVAFDKKAGSMAALLCFFCWVGASFFANRLGYSQTCKVVL 120
            DHGLVLNFGFLFTLIYAA YV FDKKAGSMAALLCF CWVGASF ANRLGYSQT KVVL
Sbjct: 61  FDHGLVLNFGFLFTLIYAASYVVFDKKAGSMAALLCFVCWVGASFIANRLGYSQTWKVVL 120

Query: 121 AAQLFCWTNQFIGHGVFEKRAPALFDNLAQAFLMAPFFVILEVLQIFFKYEPYPGFSASV 180
           AAQLFCWTNQFIGHGVFEKRAPAL DNLAQAFLMAPFFV+LEVLQ  FKYEPYPGFSASV
Sbjct: 121 AAQLFCWTNQFIGHGVFEKRAPALLDNLAQAFLMAPFFVVLEVLQSLFKYEPYPGFSASV 180

Query: 181 QAKIEEDIKEWKEKKEKLS 200
           QAKI+ DI+EWKEKK+KLS
Sbjct: 181 QAKIKADIEEWKEKKKKLS 198

[Close]

BLAST of Sed0027423.1 vs. NCBI nr
Match: XP_004138174.1 (uncharacterized endoplasmic reticulum membrane protein YGL010W [Cucumis sativus] >KGN63680.1 hypothetical protein Csa_014278 [Cucumis sativus])

HSP 1 Score: 350.5 bits (898), Expect = 9.4e-93
Identity = 173/199 (86.93%), Postives = 183/199 (91.96%), Query Frame = 0


Query: 1   MGKSSGLFDLEWNFALYGAYHSNPLNIFIHVLFVWPLFFTSLMYLYFTPSFYTFPKSPFG 60
           MGK +GLFDLE  FA YGAYHSNP+NIFIHVLFVWP+FFTSLMYLYFTPSFYT PKSP G
Sbjct: 1   MGK-TGLFDLEKQFAFYGAYHSNPMNIFIHVLFVWPIFFTSLMYLYFTPSFYTIPKSPCG 60

Query: 61  IDHGLVLNFGFLFTLIYAAFYVAFDKKAGSMAALLCFFCWVGASFFANRLGYSQTCKVVL 120
            DHGLVLNFGFLFTL+YAA+YV FDK+AGSMAALLCF CWVGASF AN+LGYSQT KVVL
Sbjct: 61  FDHGLVLNFGFLFTLMYAAYYVVFDKRAGSMAALLCFVCWVGASFIANKLGYSQTWKVVL 120

Query: 121 AAQLFCWTNQFIGHGVFEKRAPALFDNLAQAFLMAPFFVILEVLQIFFKYEPYPGFSASV 180
           AAQLFCWTNQFIGHGVFEKRAPAL DNLAQAFLMAPFFV+LEVLQ  FKYEPYPGFSASV
Sbjct: 121 AAQLFCWTNQFIGHGVFEKRAPALLDNLAQAFLMAPFFVVLEVLQSLFKYEPYPGFSASV 180

Query: 181 QAKIEEDIKEWKEKKEKLS 200
           QAKI+ DI+EWKE KEKLS
Sbjct: 181 QAKIKADIREWKETKEKLS 198

[Close]

BLAST of Sed0027423.1 vs. NCBI nr
Match: XP_008453216.1 (PREDICTED: uncharacterized endoplasmic reticulum membrane protein YGL010W [Cucumis melo] >KAA0057952.1 putative endoplasmic reticulum membrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-92
Identity = 172/199 (86.43%), Postives = 183/199 (91.96%), Query Frame = 0


Query: 1   MGKSSGLFDLEWNFALYGAYHSNPLNIFIHVLFVWPLFFTSLMYLYFTPSFYTFPKSPFG 60
           MGK +GLFDLE  FA YGAYHSNP+NIFIHVLFVWP+FFTSLMYLYFTPSFYT PKSP G
Sbjct: 1   MGK-TGLFDLEKQFAFYGAYHSNPMNIFIHVLFVWPIFFTSLMYLYFTPSFYTIPKSPCG 60

Query: 61  IDHGLVLNFGFLFTLIYAAFYVAFDKKAGSMAALLCFFCWVGASFFANRLGYSQTCKVVL 120
            DHGLVLNFGF FTL+YAA+YV FDK+AGSMAALLCF CWVGAS+ AN+LGYSQT KVVL
Sbjct: 61  FDHGLVLNFGFFFTLMYAAYYVVFDKRAGSMAALLCFVCWVGASYIANKLGYSQTWKVVL 120

Query: 121 AAQLFCWTNQFIGHGVFEKRAPALFDNLAQAFLMAPFFVILEVLQIFFKYEPYPGFSASV 180
           AAQLFCWTNQFIGHGVFEKRAPAL DNLAQAFLMAPFFV+LEVLQ  FKYEPYPGFSASV
Sbjct: 121 AAQLFCWTNQFIGHGVFEKRAPALLDNLAQAFLMAPFFVVLEVLQSLFKYEPYPGFSASV 180

Query: 181 QAKIEEDIKEWKEKKEKLS 200
           QAKI+ DI+EWKEKKEKLS
Sbjct: 181 QAKIKADIREWKEKKEKLS 198

[Close]

BLAST of Sed0027423.1 vs. NCBI nr
Match: XP_022933403.1 (uncharacterized endoplasmic reticulum membrane protein C16E8.02 [Cucurbita moschata] >KAG7021523.1 SPAC16E8.02 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 349.4 bits (895), Expect = 2.1e-92
Identity = 174/199 (87.44%), Postives = 182/199 (91.46%), Query Frame = 0


Query: 1   MGKSSGLFDLEWNFALYGAYHSNPLNIFIHVLFVWPLFFTSLMYLYFTPSFYTFPKSPFG 60
           MGK++  FDLE +FA YGAYHSNP+NIFIHVLFVWP+FFT+LMYLYFTPSFYT PKSP G
Sbjct: 1   MGKTA-FFDLERHFAFYGAYHSNPVNIFIHVLFVWPIFFTTLMYLYFTPSFYTIPKSPCG 60

Query: 61  IDHGLVLNFGFLFTLIYAAFYVAFDKKAGSMAALLCFFCWVGASFFANRLGYSQTCKVVL 120
            DHGLVLNFGFLFTLIYAA YV FDK+AGSMAALLCF CWVGASF +NRLGYSQT KVVL
Sbjct: 61  FDHGLVLNFGFLFTLIYAASYVIFDKRAGSMAALLCFVCWVGASFISNRLGYSQTWKVVL 120

Query: 121 AAQLFCWTNQFIGHGVFEKRAPALFDNLAQAFLMAPFFVILEVLQIFFKYEPYPGFSASV 180
           AAQLFCWTNQFIGHGVFEKRAPAL DNLAQAFLMAPFFV LEVLQ  FKYEPYPGFSASV
Sbjct: 121 AAQLFCWTNQFIGHGVFEKRAPALLDNLAQAFLMAPFFVFLEVLQTLFKYEPYPGFSASV 180

Query: 181 QAKIEEDIKEWKEKKEKLS 200
           QAKIE DIKEWKEKKEKLS
Sbjct: 181 QAKIEADIKEWKEKKEKLS 198

[Close]

BLAST of Sed0027423.1 vs. NCBI nr
Match: XP_023531593.1 (uncharacterized endoplasmic reticulum membrane protein C16E8.02 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 344.4 bits (882), Expect = 6.8e-91
Identity = 171/196 (87.24%), Postives = 179/196 (91.33%), Query Frame = 0


Query: 1   MGKSSGLFDLEWNFALYGAYHSNPLNIFIHVLFVWPLFFTSLMYLYFTPSFYTFPKSPFG 60
           MGK++  FDLE +FA YGAYHSNP+NIFIHVLFVWP+FFT+LMYLYFTPSFYT PKSP G
Sbjct: 1   MGKTA-FFDLERHFAFYGAYHSNPINIFIHVLFVWPIFFTTLMYLYFTPSFYTIPKSPCG 60

Query: 61  IDHGLVLNFGFLFTLIYAAFYVAFDKKAGSMAALLCFFCWVGASFFANRLGYSQTCKVVL 120
            DHGLVLNFGFLFTLIYAA YV FDKKAGSMAALLCF CWVGASF +NRLGYSQT KVVL
Sbjct: 61  FDHGLVLNFGFLFTLIYAASYVIFDKKAGSMAALLCFVCWVGASFISNRLGYSQTWKVVL 120

Query: 121 AAQLFCWTNQFIGHGVFEKRAPALFDNLAQAFLMAPFFVILEVLQIFFKYEPYPGFSASV 180
           AAQLFCWTNQFIGHGVFEKRAPAL DNLAQAFLMAPFFV LEVLQ  FKYEPYPGFSASV
Sbjct: 121 AAQLFCWTNQFIGHGVFEKRAPALLDNLAQAFLMAPFFVFLEVLQTLFKYEPYPGFSASV 180

Query: 181 QAKIEEDIKEWKEKKE 197
           QAKIE DIKEWKEKK+
Sbjct: 181 QAKIEADIKEWKEKKK 195

[Close]

BLAST of Sed0027423.1 vs. ExPASy Swiss-Prot
Match: O13737 (2-hydroxy-palmitic acid dioxygenase mpo1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mpo1 PE=3 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 2.3e-17
Identity = 65/182 (35.71%), Postives = 90/182 (49.45%), Query Frame = 0


Query: 10  LEWNFALYGAYHSNPLNIFIHVLFVWPLFFTSLMYLY-FTPSFYTFPKSPFGIDHGLVLN 69
           L  +++ Y AYHSNP+NI IH + +  L  T+L+ L+ F  +          I+  L +N
Sbjct: 4   LSRSYSFYAAYHSNPVNIKIHQVCIPLLLLTALVLLHNFVITL---------INSKLQIN 63

Query: 70  FGFLFTLIYAAFYVAFDKKAGSM-AALLCFFCWVGASFFANRLGYSQTCKVVLAAQLFCW 129
              L  L Y  FYV  D   G + + +L  F ++  S        S   +      + CW
Sbjct: 64  VAHLVGLAYQIFYVTLDPLDGLLYSPVLYLFSYILPSKLFTIFSRSLVNRSAAVVHVICW 123

Query: 130 TNQFIGHGVFEKRAPALFDNLAQAFLMAPFFVILEVLQIFFKYEPYPGFSASVQAKIEED 189
             QFIGHGVFEKR PAL DNL Q+  +AP F  LE         P+ G+  SV +KI  +
Sbjct: 124 ILQFIGHGVFEKRKPALLDNLIQSLFIAPLFAFLET-------GPFVGYYPSVVSKIRAN 169

[Close]

BLAST of Sed0027423.1 vs. ExPASy Swiss-Prot
Match: P25338 (2-hydroxy-palmitic acid dioxygenase MPO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MPO1 PE=1 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 6.9e-14
Identity = 59/184 (32.07%), Postives = 85/184 (46.20%), Query Frame = 0


Query: 6   GLFDLEWNFALYGAYHSNPLNIFIHVLFVWPLFFTSLMYLYFTPSFYTFPKSPFGIDHGL 65
           GL DL      Y  YH NP N+ IH +FV  + F+    L+    + +           L
Sbjct: 4   GLLDLRSQLGFYKFYHHNPKNVLIHSIFVPTILFSGSCMLHRVKIYQSI---------SL 63

Query: 66  VLNFGFLFTLIYAAFYVAFDKKAGSMAALLCFFCWVGASFFANRLGYSQTCKVVLAAQLF 125
                 LF++ Y   Y+     AG +  LL        +   +R+    T K  L     
Sbjct: 64  TAVLSVLFSIFYCLLYLPTGLLAGVLLLLL------NLALIDHRV--DLTFKQELGLFTI 123

Query: 126 CWTNQFIGHGVFEKRAPALFDNLAQAFLMAPFFVILEVLQIFFKYEPYPGFSASVQAKIE 185
            W  QF+GHGVFEKR PAL DNL Q+ ++AP+F++ E L   FK     GF   ++A +E
Sbjct: 124 GWIFQFVGHGVFEKRRPALIDNLVQSLVLAPYFIMFEFL---FKL----GFMPRLKATLE 163

Query: 186 EDIK 190
            D++
Sbjct: 184 HDLE 163

[Close]

BLAST of Sed0027423.1 vs. ExPASy TrEMBL
Match: A0A0A0LP54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009840 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.6e-93
Identity = 173/199 (86.93%), Postives = 183/199 (91.96%), Query Frame = 0


Query: 1   MGKSSGLFDLEWNFALYGAYHSNPLNIFIHVLFVWPLFFTSLMYLYFTPSFYTFPKSPFG 60
           MGK +GLFDLE  FA YGAYHSNP+NIFIHVLFVWP+FFTSLMYLYFTPSFYT PKSP G
Sbjct: 1   MGK-TGLFDLEKQFAFYGAYHSNPMNIFIHVLFVWPIFFTSLMYLYFTPSFYTIPKSPCG 60

Query: 61  IDHGLVLNFGFLFTLIYAAFYVAFDKKAGSMAALLCFFCWVGASFFANRLGYSQTCKVVL 120
            DHGLVLNFGFLFTL+YAA+YV FDK+AGSMAALLCF CWVGASF AN+LGYSQT KVVL
Sbjct: 61  FDHGLVLNFGFLFTLMYAAYYVVFDKRAGSMAALLCFVCWVGASFIANKLGYSQTWKVVL 120

Query: 121 AAQLFCWTNQFIGHGVFEKRAPALFDNLAQAFLMAPFFVILEVLQIFFKYEPYPGFSASV 180
           AAQLFCWTNQFIGHGVFEKRAPAL DNLAQAFLMAPFFV+LEVLQ  FKYEPYPGFSASV
Sbjct: 121 AAQLFCWTNQFIGHGVFEKRAPALLDNLAQAFLMAPFFVVLEVLQSLFKYEPYPGFSASV 180

Query: 181 QAKIEEDIKEWKEKKEKLS 200
           QAKI+ DI+EWKE KEKLS
Sbjct: 181 QAKIKADIREWKETKEKLS 198

[Close]

BLAST of Sed0027423.1 vs. ExPASy TrEMBL
Match: A0A5A7UQ13 (Putative endoplasmic reticulum membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002550 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 6.0e-93
Identity = 172/199 (86.43%), Postives = 183/199 (91.96%), Query Frame = 0


Query: 1   MGKSSGLFDLEWNFALYGAYHSNPLNIFIHVLFVWPLFFTSLMYLYFTPSFYTFPKSPFG 60
           MGK +GLFDLE  FA YGAYHSNP+NIFIHVLFVWP+FFTSLMYLYFTPSFYT PKSP G
Sbjct: 1   MGK-TGLFDLEKQFAFYGAYHSNPMNIFIHVLFVWPIFFTSLMYLYFTPSFYTIPKSPCG 60

Query: 61  IDHGLVLNFGFLFTLIYAAFYVAFDKKAGSMAALLCFFCWVGASFFANRLGYSQTCKVVL 120
            DHGLVLNFGF FTL+YAA+YV FDK+AGSMAALLCF CWVGAS+ AN+LGYSQT KVVL
Sbjct: 61  FDHGLVLNFGFFFTLMYAAYYVVFDKRAGSMAALLCFVCWVGASYIANKLGYSQTWKVVL 120

Query: 121 AAQLFCWTNQFIGHGVFEKRAPALFDNLAQAFLMAPFFVILEVLQIFFKYEPYPGFSASV 180
           AAQLFCWTNQFIGHGVFEKRAPAL DNLAQAFLMAPFFV+LEVLQ  FKYEPYPGFSASV
Sbjct: 121 AAQLFCWTNQFIGHGVFEKRAPALLDNLAQAFLMAPFFVVLEVLQSLFKYEPYPGFSASV 180

Query: 181 QAKIEEDIKEWKEKKEKLS 200
           QAKI+ DI+EWKEKKEKLS
Sbjct: 181 QAKIKADIREWKEKKEKLS 198

[Close]

BLAST of Sed0027423.1 vs. ExPASy TrEMBL
Match: A0A1S3BV50 (uncharacterized endoplasmic reticulum membrane protein YGL010W OS=Cucumis melo OX=3656 GN=LOC103494003 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 6.0e-93
Identity = 172/199 (86.43%), Postives = 183/199 (91.96%), Query Frame = 0


Query: 1   MGKSSGLFDLEWNFALYGAYHSNPLNIFIHVLFVWPLFFTSLMYLYFTPSFYTFPKSPFG 60
           MGK +GLFDLE  FA YGAYHSNP+NIFIHVLFVWP+FFTSLMYLYFTPSFYT PKSP G
Sbjct: 1   MGK-TGLFDLEKQFAFYGAYHSNPMNIFIHVLFVWPIFFTSLMYLYFTPSFYTIPKSPCG 60

Query: 61  IDHGLVLNFGFLFTLIYAAFYVAFDKKAGSMAALLCFFCWVGASFFANRLGYSQTCKVVL 120
            DHGLVLNFGF FTL+YAA+YV FDK+AGSMAALLCF CWVGAS+ AN+LGYSQT KVVL
Sbjct: 61  FDHGLVLNFGFFFTLMYAAYYVVFDKRAGSMAALLCFVCWVGASYIANKLGYSQTWKVVL 120

Query: 121 AAQLFCWTNQFIGHGVFEKRAPALFDNLAQAFLMAPFFVILEVLQIFFKYEPYPGFSASV 180
           AAQLFCWTNQFIGHGVFEKRAPAL DNLAQAFLMAPFFV+LEVLQ  FKYEPYPGFSASV
Sbjct: 121 AAQLFCWTNQFIGHGVFEKRAPALLDNLAQAFLMAPFFVVLEVLQSLFKYEPYPGFSASV 180

Query: 181 QAKIEEDIKEWKEKKEKLS 200
           QAKI+ DI+EWKEKKEKLS
Sbjct: 181 QAKIKADIREWKEKKEKLS 198

[Close]

BLAST of Sed0027423.1 vs. ExPASy TrEMBL
Match: A0A6J1F4N0 (uncharacterized endoplasmic reticulum membrane protein C16E8.02 OS=Cucurbita moschata OX=3662 GN=LOC111440831 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.0e-92
Identity = 174/199 (87.44%), Postives = 182/199 (91.46%), Query Frame = 0


Query: 1   MGKSSGLFDLEWNFALYGAYHSNPLNIFIHVLFVWPLFFTSLMYLYFTPSFYTFPKSPFG 60
           MGK++  FDLE +FA YGAYHSNP+NIFIHVLFVWP+FFT+LMYLYFTPSFYT PKSP G
Sbjct: 1   MGKTA-FFDLERHFAFYGAYHSNPVNIFIHVLFVWPIFFTTLMYLYFTPSFYTIPKSPCG 60

Query: 61  IDHGLVLNFGFLFTLIYAAFYVAFDKKAGSMAALLCFFCWVGASFFANRLGYSQTCKVVL 120
            DHGLVLNFGFLFTLIYAA YV FDK+AGSMAALLCF CWVGASF +NRLGYSQT KVVL
Sbjct: 61  FDHGLVLNFGFLFTLIYAASYVIFDKRAGSMAALLCFVCWVGASFISNRLGYSQTWKVVL 120

Query: 121 AAQLFCWTNQFIGHGVFEKRAPALFDNLAQAFLMAPFFVILEVLQIFFKYEPYPGFSASV 180
           AAQLFCWTNQFIGHGVFEKRAPAL DNLAQAFLMAPFFV LEVLQ  FKYEPYPGFSASV
Sbjct: 121 AAQLFCWTNQFIGHGVFEKRAPALLDNLAQAFLMAPFFVFLEVLQTLFKYEPYPGFSASV 180

Query: 181 QAKIEEDIKEWKEKKEKLS 200
           QAKIE DIKEWKEKKEKLS
Sbjct: 181 QAKIEADIKEWKEKKEKLS 198

[Close]

BLAST of Sed0027423.1 vs. ExPASy TrEMBL
Match: A0A6J1IBP8 (uncharacterized endoplasmic reticulum membrane protein C16E8.02 OS=Cucurbita maxima OX=3661 GN=LOC111471498 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.1e-90
Identity = 170/199 (85.43%), Postives = 179/199 (89.95%), Query Frame = 0


Query: 1   MGKSSGLFDLEWNFALYGAYHSNPLNIFIHVLFVWPLFFTSLMYLYFTPSFYTFPKSPFG 60
           MGK++  FDLE ++A YGAYHSNP+NIFIHVLFVWP+FFT+LMYLYFTPSFYT PKSP G
Sbjct: 1   MGKTA-FFDLERHYAFYGAYHSNPVNIFIHVLFVWPIFFTTLMYLYFTPSFYTIPKSPCG 60

Query: 61  IDHGLVLNFGFLFTLIYAAFYVAFDKKAGSMAALLCFFCWVGASFFANRLGYSQTCKVVL 120
            DHGLVLNFGFLFTL YAA YV FDKKAGSMAALLCF CWVGASF +NRLGYSQT KVVL
Sbjct: 61  FDHGLVLNFGFLFTLTYAASYVIFDKKAGSMAALLCFVCWVGASFISNRLGYSQTWKVVL 120

Query: 121 AAQLFCWTNQFIGHGVFEKRAPALFDNLAQAFLMAPFFVILEVLQIFFKYEPYPGFSASV 180
           AAQLFCWTNQ IGHGVFEKRAPAL DNLAQAFLMAPFFV LEVLQ  FKYEPYPGFS+SV
Sbjct: 121 AAQLFCWTNQIIGHGVFEKRAPALLDNLAQAFLMAPFFVFLEVLQTLFKYEPYPGFSSSV 180

Query: 181 QAKIEEDIKEWKEKKEKLS 200
           QAKIE DIKEWKE KEKLS
Sbjct: 181 QAKIEADIKEWKEMKEKLS 198

[Close]

BLAST of Sed0027423.1 vs. TAIR 10
Match: AT1G18720.1 (Protein of unknown function (DUF962) )

HSP 1 Score: 246.5 bits (628), Expect = 1.8e-65
Identity = 127/202 (62.87%), Postives = 151/202 (74.75%), Query Frame = 0


Query: 1   MGKSSGLFDLEWNFALYGAYHSNPLNIFIHVLFVWPLFFTSLMYLY-----FTPSFYTFP 60
           M +  GLFDLE +FA YGAYHSNP+NI IH++FVWP+FF+ L+ L+     F PS   F 
Sbjct: 1   MSRIMGLFDLEKHFAFYGAYHSNPINILIHIIFVWPIFFSVLLLLHSSTPIFDPSQLGFS 60

Query: 61  KSPFGIDHGLVLNFGFLFTLIYAAFYVAFDKKAGSMAALLCFFCWVGASFFANRLGYSQT 120
           +S   +D  L  N GF+F LIYA FY+  DKK+G +AAL+CF CWVG+SF A RLG S  
Sbjct: 61  QS-LTLDGVLRFNVGFIFALIYALFYIGLDKKSGFVAALMCFSCWVGSSFLAVRLGSSLA 120

Query: 121 CKVVLAAQLFCWTNQFIGHGVFEKRAPALFDNLAQAFLMAPFFVILEVLQIFFKYEPYPG 180
            KV LA+QL CWT QF+GHGVFEKRAPAL DNL QAFLMAPFFV+LEVLQ  F YEPYPG
Sbjct: 121 LKVGLASQLLCWTGQFVGHGVFEKRAPALLDNLLQAFLMAPFFVLLEVLQSVFGYEPYPG 180

Query: 181 FSASVQAKIEEDIKEWKEKKEK 198
           F A V AK+E DIKE++ KK+K
Sbjct: 181 FQARVNAKVESDIKEYRAKKQK 201

[Close]

BLAST of Sed0027423.1 vs. TAIR 10
Match: AT1G74440.1 (Protein of unknown function (DUF962) )

HSP 1 Score: 239.2 bits (609), Expect = 2.9e-63
Identity = 121/201 (60.20%), Postives = 144/201 (71.64%), Query Frame = 0


Query: 1   MGKSSGLFDLEWNFALYGAYHSNPLNIFIHVLFVWPLFFTSLMYLYFTPSFYTFPKSPF- 60
           M    GL DLE +FA YGAYHSNP+NI IH LFVWP  F +L++LY TP      +  F 
Sbjct: 1   MSNRIGLLDLEKHFAFYGAYHSNPINIIIHTLFVWPNVFATLLFLYSTPPILDHSQLGFL 60

Query: 61  ---GIDHGLVLNFGFLFTLIYAAFYVAFDKKAGSMAALLCFFCWVGASFFANRLGYSQTC 120
                D  L L+ GF  T+ YA FY+  DKK+G +AALLCF CW+G+SF A RLG+S T 
Sbjct: 61  KSLTFDGVLRLDIGFTLTVTYAVFYICLDKKSGVLAALLCFSCWIGSSFLAARLGHSLTL 120

Query: 121 KVVLAAQLFCWTNQFIGHGVFEKRAPALFDNLAQAFLMAPFFVILEVLQIFFKYEPYPGF 180
           KV +A+QL CWT QF+GHG+FEKRAPAL DNL QAFLM PFFV+LEVLQ  F YEPYPGF
Sbjct: 121 KVGVASQLLCWTGQFLGHGLFEKRAPALLDNLLQAFLMGPFFVLLEVLQSVFGYEPYPGF 180

Query: 181 SASVQAKIEEDIKEWKEKKEK 198
            A V +KIE  IKEW+EKK++
Sbjct: 181 KARVDSKIESGIKEWREKKKQ 201

The following BLAST results are available for this feature:

BLAST of Sed0027423.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880038.1	1.5e-93	88.44	2-hydroxy-palmitic acid dioxygenase MPO1 [Benincasa hispida]	[more]
XP_004138174.1	9.4e-93	86.93	uncharacterized endoplasmic reticulum membrane protein YGL010W [Cucumis sativus]...	[more]
XP_008453216.1	1.2e-92	86.43	PREDICTED: uncharacterized endoplasmic reticulum membrane protein YGL010W [Cucum...	[more]
XP_022933403.1	2.1e-92	87.44	uncharacterized endoplasmic reticulum membrane protein C16E8.02 [Cucurbita mosch...	[more]
XP_023531593.1	6.8e-91	87.24	uncharacterized endoplasmic reticulum membrane protein C16E8.02 [Cucurbita pepo ...	[more]

BLAST of Sed0027423.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O13737	2.3e-17	35.71	2-hydroxy-palmitic acid dioxygenase mpo1 OS=Schizosaccharomyces pombe (strain 97...	[more]
P25338	6.9e-14	32.07	2-hydroxy-palmitic acid dioxygenase MPO1 OS=Saccharomyces cerevisiae (strain ATC...	[more]

BLAST of Sed0027423.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LP54	4.6e-93	86.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009840 PE=4 SV=1	[more]
A0A5A7UQ13	6.0e-93	86.43	Putative endoplasmic reticulum membrane protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BV50	6.0e-93	86.43	uncharacterized endoplasmic reticulum membrane protein YGL010W OS=Cucumis melo O...	[more]
A0A6J1F4N0	1.0e-92	87.44	uncharacterized endoplasmic reticulum membrane protein C16E8.02 OS=Cucurbita mos...	[more]
A0A6J1IBP8	2.1e-90	85.43	uncharacterized endoplasmic reticulum membrane protein C16E8.02 OS=Cucurbita max...	[more]

BLAST of Sed0027423.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18720.1	1.8e-65	62.87	Protein of unknown function (DUF962)	[more]
AT1G74440.1	2.9e-63	60.20	Protein of unknown function (DUF962)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 181..199
None	No IPR available	PANTHER	PTHR28026:SF8	YGL010W-LIKE PROTEIN	coord: 1..198
IPR009305	2-hydroxy-palmitic acid dioxygenase Mpo1-like	PFAM	PF06127	DUF962	coord: 9..165 e-value: 1.0E-25 score: 89.6
IPR009305	2-hydroxy-palmitic acid dioxygenase Mpo1-like	PANTHER	PTHR28026	DUF962 DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_8G05310)	coord: 1..198

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0027423	Sed0027423	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0027423.1-five_prime_utr	Sed0027423.1-five_prime_utr-LG12:30615410..30615517	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0027423.1-exon	Sed0027423.1-exon-LG12:30615410..30615868	exon
Sed0027423.1-exon	Sed0027423.1-exon-LG12:30616754..30616816	exon
Sed0027423.1-exon	Sed0027423.1-exon-LG12:30616908..30616979	exon
Sed0027423.1-exon	Sed0027423.1-exon-LG12:30617074..30617375	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0027423.1-cds	Sed0027423.1-cds-LG12:30615518..30615868	CDS
Sed0027423.1-cds	Sed0027423.1-cds-LG12:30616754..30616816	CDS
Sed0027423.1-cds	Sed0027423.1-cds-LG12:30616908..30616979	CDS
Sed0027423.1-cds	Sed0027423.1-cds-LG12:30617074..30617187	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0027423.1-three_prime_utr	Sed0027423.1-three_prime_utr-LG12:30617188..30617375	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0027423.1	Sed0027423.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046521	sphingoid catabolic process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane