Sed0027219.1 (mRNA) Chayote v1

Overview


Name	Sed0027219.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Phloem protein 2
Location	LG08: 34006884 .. 34008051 (-)
Sequence length	890
RNA-Seq Expression	Sed0027219.1
Synteny	Sed0027219.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCCATTACTTTCTTGATCAATCCAAACAACACTCTTCAATGACAGGCTTTACGATAACCGCTGGGTTGAAAGCTCTTTTGGCAGAAGCAGATGGGGGTTTGGATTTAAACTCCTGCGGCATTCGAAATCTACTCTGTAATGGCGTCCTCTTGAGCAATGGAACTAAGGCAAGTAGTCGAACTCTACGTACGTTTTTCGTAATTGTTAATTATGTATAATATATGTATATCACTTCTACGTCAATTACAGATCATAACCAAACCTCATGCATAATCCAAATGAGGGAGTTCTGTCACGACCTCGATCGTTTAAGGATTTTTTTATAGTCCTGATTGGTTTGAAAATTATTTTGAATGAATGCAGAAAGTTGTGCTTGACAAGAGCCTAAACGTCTATACCATCATTTTCTATGCAAGAGCTCTGACAATAGCTTGGATTGATGATCGCCGATATTGGCGATGGACAAGGGAGGGCTGGTATAATCCTAAGCTTAACCCTAACATTGAATTAAATATGCTATGATATGCATGTTAGATTATGACTAAATAAAACTTGCAGTGGGAGCTCAACCGAAGTGGCTGAGCTTATACAAGTAAGTTGGCTCGATATCAGTGGAAAGATCCAAGCATCTAAGCTATTAGCAGAAATTCATTACGAAATAGTATTCGAGATATATATTAAAACTGGGGCCAGTGGGTTCGAAATTCCTGTGAACCTCAGGCTGAAGGTGCCAAACCAGTGCCCCCAAGAACACAAAGTAAACCTGACCACGTTTCCAAGAGATCGATGGGTCGATGTTTCGGTCGGCATTTTCAAACTGAGTGCATCTGATATTTGTGGTTGCGAGGACGTCGAGTTCAGTCTGTATGAACATGGAGGCCACTGGAAGACCGGCTTGCTTGTCAGAGCTGGTATCATTCGACCCAAGCAACTCTGCGGTTGAACCCTTTATACCAACTACTATATCAAAACATAAATAAAGCACGTTGTACCCACCTTTTGCTTCATCTTTCTCTTCTAAATATATATGTATCAGAAAAAAAAATATGTATGGATATATATATATATATATATATATATATATATATATATATAATGTAATAGTATGGAAACTTATATATGAATAGTATCACCTTTTGCGTACTAGCAACAAGGTTAAGTTCAAA

mRNA sequence

TCTCCATTACTTTCTTGATCAATCCAAACAACACTCTTCAATGACAGGCTTTACGATAACCGCTGGGTTGAAAGCTCTTTTGGCAGAAGCAGATGGGGGTTTGGATTTAAACTCCTGCGGCATTCGAAATCTACTCTGTAATGGCGTCCTCTTGAGCAATGGAACTAAGAAAGTTGTGCTTGACAAGAGCCTAAACGTCTATACCATCATTTTCTATGCAAGAGCTCTGACAATAGCTTGGATTGATGATCGCCGATATTGGCGATGGACAAGGGAGGGCTGTGGGAGCTCAACCGAAGTGGCTGAGCTTATACAAGTAAGTTGGCTCGATATCAGTGGAAAGATCCAAGCATCTAAGCTATTAGCAGAAATTCATTACGAAATAGTATTCGAGATATATATTAAAACTGGGGCCAGTGGGTTCGAAATTCCTGTGAACCTCAGGCTGAAGGTGCCAAACCAGTGCCCCCAAGAACACAAAGTAAACCTGACCACGTTTCCAAGAGATCGATGGGTCGATGTTTCGGTCGGCATTTTCAAACTGAGTGCATCTGATATTTGTGGTTGCGAGGACGTCGAGTTCAGTCTGTATGAACATGGAGGCCACTGGAAGACCGGCTTGCTTGTCAGAGCTGGTATCATTCGACCCAAGCAACTCTGCGGTTGAACCCTTTATACCAACTACTATATCAAAACATAAATAAAGCACGTTGTACCCACCTTTTGCTTCATCTTTCTCTTCTAAATATATATGTATCAGAAAAAAAAATATGTATGGATATATATATATATATATATATATATATATATATATATATAATGTAATAGTATGGAAACTTATATATGAATAGTATCACCTTTTGCGTACTAGCAACAAGGTTAAGTTCAAA

Coding sequence (CDS)

ATGACAGGCTTTACGATAACCGCTGGGTTGAAAGCTCTTTTGGCAGAAGCAGATGGGGGTTTGGATTTAAACTCCTGCGGCATTCGAAATCTACTCTGTAATGGCGTCCTCTTGAGCAATGGAACTAAGAAAGTTGTGCTTGACAAGAGCCTAAACGTCTATACCATCATTTTCTATGCAAGAGCTCTGACAATAGCTTGGATTGATGATCGCCGATATTGGCGATGGACAAGGGAGGGCTGTGGGAGCTCAACCGAAGTGGCTGAGCTTATACAAGTAAGTTGGCTCGATATCAGTGGAAAGATCCAAGCATCTAAGCTATTAGCAGAAATTCATTACGAAATAGTATTCGAGATATATATTAAAACTGGGGCCAGTGGGTTCGAAATTCCTGTGAACCTCAGGCTGAAGGTGCCAAACCAGTGCCCCCAAGAACACAAAGTAAACCTGACCACGTTTCCAAGAGATCGATGGGTCGATGTTTCGGTCGGCATTTTCAAACTGAGTGCATCTGATATTTGTGGTTGCGAGGACGTCGAGTTCAGTCTGTATGAACATGGAGGCCACTGGAAGACCGGCTTGCTTGTCAGAGCTGGTATCATTCGACCCAAGCAACTCTGCGGTTGA

Protein sequence

MTGFTITAGLKALLAEADGGLDLNSCGIRNLLCNGVLLSNGTKKVVLDKSLNVYTIIFYARALTIAWIDDRRYWRWTREGCGSSTEVAELIQVSWLDISGKIQASKLLAEIHYEIVFEIYIKTGASGFEIPVNLRLKVPNQCPQEHKVNLTTFPRDRWVDVSVGIFKLSASDICGCEDVEFSLYEHGGHWKTGLLVRAGIIRPKQLCG

Homology

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BLAST of Sed0027219.1 vs. NCBI nr
Match: KDP23149.1 (hypothetical protein JCGZ_00141 [Jatropha curcas])

HSP 1 Score: 164.9 bits (416), Expect = 7.7e-37
Identity = 86/198 (43.43%), Postives = 121/198 (61.11%), Query Frame = 0


Query: 11  KALLAEADGGLDLNSCG-IRNLLCNGVLLSNGTKKVVLDKSLNVYTIIFYARALTIAWID 70
           +++L EAD  +D +S   + + LCNGV L+   KK  ++K  N      +ARAL+I W +
Sbjct: 50  ESILREADSVIDKSSADKLYDQLCNGVFLNQKKKKYWVEKKSNGNCFFLFARALSITWAE 109

Query: 71  DRRYWRWT--REGCGSSTEVAELIQVSWLDISGKIQASKLLAEIHYEIVFEIYIKTGASG 130
           D R+W W    E   +  EVAEL+ V WL+I GK   +KL +   YE+ F I +K  A G
Sbjct: 110 DNRFWHWPCHYETSDAFVEVAELLNVCWLEIHGKFDTTKLSSIFLYEVAFVIMLKDCAYG 169

Query: 131 FEIPVNLRLKVPNQCPQEHKVNLTTFPRDRWVDVSVGIFKLSASDICGCEDVEFSLYEH- 190
           +E+PVN R+ +PN   QEHK NL T PR RW+++ VG F  S  ++    ++E SLYE+ 
Sbjct: 170 WEVPVNTRITLPNGIKQEHKQNLATKPRGRWIEIPVGEFITSPENV---GEIEVSLYEYE 229

Query: 191 GGHWKTGLLVRAGIIRPK 205
           GG WK GL+V+  IIRPK
Sbjct: 230 GGKWKKGLVVKGIIIRPK 244

[Close]

BLAST of Sed0027219.1 vs. NCBI nr
Match: XP_012089530.1 (lectin [Jatropha curcas])

HSP 1 Score: 164.9 bits (416), Expect = 7.7e-37
Identity = 86/198 (43.43%), Postives = 121/198 (61.11%), Query Frame = 0


Query: 11  KALLAEADGGLDLNSCG-IRNLLCNGVLLSNGTKKVVLDKSLNVYTIIFYARALTIAWID 70
           +++L EAD  +D +S   + + LCNGV L+   KK  ++K  N      +ARAL+I W +
Sbjct: 61  ESILREADSVIDKSSADKLYDQLCNGVFLNQKKKKYWVEKKSNGNCFFLFARALSITWAE 120

Query: 71  DRRYWRWT--REGCGSSTEVAELIQVSWLDISGKIQASKLLAEIHYEIVFEIYIKTGASG 130
           D R+W W    E   +  EVAEL+ V WL+I GK   +KL +   YE+ F I +K  A G
Sbjct: 121 DNRFWHWPCHYETSDAFVEVAELLNVCWLEIHGKFDTTKLSSIFLYEVAFVIMLKDCAYG 180

Query: 131 FEIPVNLRLKVPNQCPQEHKVNLTTFPRDRWVDVSVGIFKLSASDICGCEDVEFSLYEH- 190
           +E+PVN R+ +PN   QEHK NL T PR RW+++ VG F  S  ++    ++E SLYE+ 
Sbjct: 181 WEVPVNTRITLPNGIKQEHKQNLATKPRGRWIEIPVGEFITSPENV---GEIEVSLYEYE 240

Query: 191 GGHWKTGLLVRAGIIRPK 205
           GG WK GL+V+  IIRPK
Sbjct: 241 GGKWKKGLVVKGIIIRPK 255

[Close]

BLAST of Sed0027219.1 vs. NCBI nr
Match: XP_038888354.1 (lectin-like [Benincasa hispida])

HSP 1 Score: 162.9 bits (411), Expect = 2.9e-36
Identity = 78/174 (44.83%), Postives = 107/174 (61.49%), Query Frame = 0


Query: 34  NGVLLSNGTKKVVLDKSLNVYTIIFYARALTIAWIDDRRYWRWTR-EGCGSSTEVAELIQ 93
           +G+ L+NGTKK +LDK+ N      YAR  +I WI D RYWRW      G + EVAE IQ
Sbjct: 47  SGIFLNNGTKKYILDKNTNSNWYFLYARGFSIDWIQDPRYWRWINITESGQTYEVAECIQ 106

Query: 94  VSWLDISGKIQASKLLAEIHYEIVFEIYIKTGASGFEIPVNLRLKVPNQCPQEHKVNLTT 153
           VSW DI  K+ A+     I Y+++++I +   ASG+E+PVN+ L  PN C  EHK +L +
Sbjct: 107 VSWFDIRVKVSATFFTPRIVYDVIWKIQLTNNASGWELPVNIELMRPNGCKIEHKQSLQS 166

Query: 154 FPRDRWVDVSVGIFKLSASDICGCE---DVEFSLYEHGGHWKTGLLVRAGIIRP 204
             R  W+++S G F +   D CGCE   ++E  +YEHGGHWK G L++    RP
Sbjct: 167 VKRGDWLEISGGDFLV---DNCGCENGGEIELHMYEHGGHWKRGFLLKGVEFRP 217

[Close]

BLAST of Sed0027219.1 vs. NCBI nr
Match: AAA92465.1 (phloem protein 2 [Cucurbita argyrosperma])

HSP 1 Score: 160.6 bits (405), Expect = 1.4e-35
Identity = 85/200 (42.50%), Postives = 119/200 (59.50%), Query Frame = 0


Query: 10  LKALLAEADGGLDLNS-CGIRNLLCNGVLLSNGTKKVVLDKSLNVYTIIFYARALTIAWI 69
           L  +L  AD  L   S   + + L  G+LL+ G  K + DK LN +    +ARAL+IAWI
Sbjct: 22  LDVILKNADVALHYPSFLKLYDQLVAGILLNKGAIKYIFDKKLNSHWYFIFARALSIAWI 81

Query: 70  DDRRYWRWTREGCGSSTEVAELIQVSWLDISGKIQASKLLAEIHYEIVFEIYIKTGASGF 129
           +D+RYW+W     GS  E+AELIQVSWLDI GKI+ S L   I YE+  ++ + +GASG+
Sbjct: 82  EDKRYWKW-----GSCNEIAELIQVSWLDIRGKIKESMLSPNIVYEVALQVQLNSGASGW 141

Query: 130 EIPVNLRLKVPNQCPQEHKVNLTTFPRDRWVDVSVGIFKLSASDICGCEDVEFSLYEHGG 189
             P+N+ LK PN    E +  L   P+++W ++ +  FK+         ++EF  YEHGG
Sbjct: 142 NHPMNIELKKPNGSKIERQECLLGKPKNQWFEIVIE-FKVDNHGCGSSGEIEFGFYEHGG 201

Query: 190 HWKTGLLVRAGIIRPKQLCG 209
           HWK+GLLV+   I  K  CG
Sbjct: 202 HWKSGLLVKGVRIGAKG-CG 214

[Close]

BLAST of Sed0027219.1 vs. NCBI nr
Match: KAF5935965.1 (hypothetical protein HYC85_027094 [Camellia sinensis])

HSP 1 Score: 159.1 bits (401), Expect = 4.2e-35
Identity = 79/199 (39.70%), Postives = 121/199 (60.80%), Query Frame = 0


Query: 11  KALLAEADGGLDLNSCG-IRNLLCNGVLLSNGTKKVVLDKSLNVYTIIFYARALTIAWID 70
           +A++ +AD  +D +S   + + L +GV L+   KK  +++  N    + YAR L+I W  
Sbjct: 58  EAIIKDADSPIDKSSIDMLYDQLQSGVFLNQKRKKYWVERKTNSNCFMLYARDLSITWAQ 117

Query: 71  DRRYWRW--TREGCGSSTEVAELIQVSWLDISGKIQASKLLAEIHYEIVFEIYIKTGASG 130
           D RYW W    E    S +VAEL+ V WLDI GK + + L   + YE+VF + +K  + G
Sbjct: 118 DNRYWHWPYLNETSNESIDVAELLNVCWLDIHGKFETANLSHGVAYEVVFVVMLKDPSYG 177

Query: 131 FEIPVNLRLKVPNQCPQEHKVNLTTFPRDRWVDVSVGIFKLSASDICGCEDVEFSLYEH- 190
           +E+PVNLRL  P+   Q+H+ NL   PR +W+++  G F++S   I   ED++FSLYE+ 
Sbjct: 178 WEVPVNLRLITPDGTTQQHQENLMQKPRGQWIEIPAGEFRMSPEKI---EDIQFSLYEYN 237

Query: 191 GGHWKTGLLVRAGIIRPKQ 206
           GG WK GL+++   IRPK+
Sbjct: 238 GGQWKRGLVIKGVAIRPKK 253

[Close]

BLAST of Sed0027219.1 vs. ExPASy Swiss-Prot
Match: C0HJV2 (Lectin OS=Luffa acutangula OX=56866 PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.7e-34
Identity = 76/172 (44.19%), Postives = 106/172 (61.63%), Query Frame = 0


Query: 35  GVLLSNGTKKVVLDKSLNVYTIIFYARALTIAWIDDRRYWRWTR-EGCGSSTEVAELIQV 94
           G+ L+N TK+   DK+      + YAR L I W  D+RYWRW   +  G++ EVAELI V
Sbjct: 41  GIFLNNRTKRYWFDKNAESNCFMLYARDLLITWSQDKRYWRWNPFQEHGNTLEVAELIDV 100

Query: 95  SWLDISGKIQASKLLAEIHYEIVFEIYIKTGASGFEIPVNLRLKVPNQCPQEHKVNLTTF 154
            WL+I G I+ S L   I YE  FE+ +   ASG+ IPV+++LK+P+   QE +VNL   
Sbjct: 101 CWLNIVGNIETSVLSPGISYEAAFEVMLTNSASGWRIPVDVKLKMPDGSEQESQVNLQDK 160

Query: 155 PRDRWVDVSVGIFKLSASDICGCEDVEFSLYEHGGHWKTGLLVRAGIIRPKQ 206
           PR  W  +SVG FK+S  +  G  ++EFS+ +H    K GLLV+  +I+PKQ
Sbjct: 161 PRGVWFFISVGHFKISVGETIG--NIEFSIVQH-QEAKRGLLVKGLVIQPKQ 209

[Close]

BLAST of Sed0027219.1 vs. ExPASy Swiss-Prot
Match: O81865 (Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana OX=3702 GN=PP2A1 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.2e-30
Identity = 76/200 (38.00%), Postives = 108/200 (54.00%), Query Frame = 0


Query: 11  KALLAEADGGLDLNSCGIRNLLCNGVLLSNGTKKVVLDKSLNVYTIIFYARALTIAWIDD 70
           +A+L +AD  + L+S  +   L +GV L    +        N    + +A+ L+I W DD
Sbjct: 50  EAILRDADPPISLSSVNLSEQLRSGVFLKPKKQIKYWVDERNSNCFMLFAKNLSITWSDD 109

Query: 71  RRYWRW--TREGCGSSTEVAELIQVSWLDISGKIQASKLLAEIHYEIVFEIYIKTGASGF 130
             YW W   +E    + E   L  V WLDI+GK     L   I YE+VF++ ++  A G+
Sbjct: 110 VNYWTWFTEKESPNENVEAVGLKNVCWLDITGKFDTRNLTPGIVYEVVFKVKLEDPAYGW 169

Query: 131 EIPVNLRLKVPN--QCPQEHKVNLTTFPRDRWVDVSVGIFKLSASDICGCEDVEFSLYEH 190
           + PVNL+L +PN  + PQE KV+L   PR +WVDV VG F    S      ++ FS+YEH
Sbjct: 170 DTPVNLKLVLPNGKEKPQEKKVSLRELPRYKWVDVRVGEFVPEKS---AAGEITFSMYEH 229

Query: 191 -GGHWKTGLLVRAGIIRPKQ 206
             G WK GL ++   IRPKQ
Sbjct: 230 AAGVWKKGLSLKGVAIRPKQ 246

[Close]

BLAST of Sed0027219.1 vs. ExPASy Swiss-Prot
Match: P0DSP5 (Lectin OS=Coccinia grandis OX=387127 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22
Identity = 50/138 (36.23%), Postives = 75/138 (54.35%), Query Frame = 0


Query: 57  IFYARALTIAWIDDRRYWRWTR-EGCGSSTEVAELIQVSWLDISGKIQASKLLAEIHYEI 116
           + + RA T+ W DD RYW W   + CG   E A+L +VSW D    +  + L   + Y +
Sbjct: 12  LLFPRAATLTWSDDTRYWSWNPVDFCGYQLEEAQLSRVSWFDCRWTVNTTDLKTNVWYNV 71

Query: 117 VFEIYIKTGASGFEIPVNLRLKVPNQCPQEHKVNLTTFPRDRWVDVSVGIFKLSASDICG 176
             ++ + +GASG+  P+NL L++PN   Q  +V L   PRD W  + +G   +S S+ CG
Sbjct: 72  FLKVQMGSGASGWNTPLNLELEMPNGSKQASQVVLNDRPRDVWFKLQMGNLMVSDSETCG 131

Query: 177 CEDVEFSLYEHGGHWKTG 194
              +  SLY H  +WK G
Sbjct: 132 A--LRMSLYNHQTNWKMG 147

[Close]

BLAST of Sed0027219.1 vs. ExPASy Swiss-Prot
Match: Q9C8U9 (Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 OS=Arabidopsis thaliana OX=3702 GN=PP2A4 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.2e-22
Identity = 61/155 (39.35%), Postives = 87/155 (56.13%), Query Frame = 0


Query: 57  IFYARALTIAWIDDRRYWRWTREGCGSSTE----VAELIQVSWLDISGKIQASKLLAEIH 116
           + YAR L+IAW D   YW W       S+E     A L  V WLD++GK    +L  E  
Sbjct: 13  MIYARDLSIAWSDKDEYWSWLPLRYDISSEKLVDAAVLEAVCWLDVNGKFDTRELTLETT 72

Query: 117 YEIVFEIYIKTGASGFEIPVNLRLKVPN--QCPQEHKVNLTTFPRDRWVDVSVGIFKLSA 176
           YE+V+ + ++  ASG+ IPVNL+L +P+  + PQE  + L      RW+D+S G F +++
Sbjct: 73  YEVVYVVKLEDTASGWNIPVNLKLTLPDGKKRPQERSMCLKEHIGKRWIDISAGEF-VTS 132

Query: 177 SDICGCEDVEFSLYE-HGGHWKTGLLVRAGIIRPK 205
            D  G  ++ FS+YE     WK GL V+   IRPK
Sbjct: 133 PDNAG--EISFSMYETKSCCWKRGLFVKCVEIRPK 164

[Close]

BLAST of Sed0027219.1 vs. ExPASy Swiss-Prot
Match: O81866 (Protein PHLOEM PROTEIN 2-LIKE A2 OS=Arabidopsis thaliana OX=3702 GN=PP2A2 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.4e-17
Identity = 43/121 (35.54%), Postives = 71/121 (58.68%), Query Frame = 0


Query: 85  TEVAELIQVSWLDISGKIQASKLLAEIHYEIVFEIYIKTGASGFEIPVNLRLKVPNQCPQ 144
           TEVA++ +V+WL++ GK +  KL     YE+VF + +   A G++  VN +L +P    +
Sbjct: 75  TEVAKMERVAWLEVVGKFETEKLTPNSLYEVVFVVKLIDSAKGWDFRVNFKLVLPTGETK 134

Query: 145 EHKVNLTTFPRDRWVDVSVGIFKLSASDICGCEDVEFSLYE-HGGHWKTGLLVRAGIIRP 204
           E + N+    R++WV++  G F +S   + G   +EFS+ E     WK+GL+V+   IRP
Sbjct: 135 ERRENVNLLERNKWVEIPAGEFMISPEHLSG--KIEFSMLEVKSDQWKSGLIVKGVAIRP 193

[Close]

BLAST of Sed0027219.1 vs. ExPASy TrEMBL
Match: A0A067JUE7 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_00141 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 3.7e-37
Identity = 86/198 (43.43%), Postives = 121/198 (61.11%), Query Frame = 0


Query: 11  KALLAEADGGLDLNSCG-IRNLLCNGVLLSNGTKKVVLDKSLNVYTIIFYARALTIAWID 70
           +++L EAD  +D +S   + + LCNGV L+   KK  ++K  N      +ARAL+I W +
Sbjct: 50  ESILREADSVIDKSSADKLYDQLCNGVFLNQKKKKYWVEKKSNGNCFFLFARALSITWAE 109

Query: 71  DRRYWRWT--REGCGSSTEVAELIQVSWLDISGKIQASKLLAEIHYEIVFEIYIKTGASG 130
           D R+W W    E   +  EVAEL+ V WL+I GK   +KL +   YE+ F I +K  A G
Sbjct: 110 DNRFWHWPCHYETSDAFVEVAELLNVCWLEIHGKFDTTKLSSIFLYEVAFVIMLKDCAYG 169

Query: 131 FEIPVNLRLKVPNQCPQEHKVNLTTFPRDRWVDVSVGIFKLSASDICGCEDVEFSLYEH- 190
           +E+PVN R+ +PN   QEHK NL T PR RW+++ VG F  S  ++    ++E SLYE+ 
Sbjct: 170 WEVPVNTRITLPNGIKQEHKQNLATKPRGRWIEIPVGEFITSPENV---GEIEVSLYEYE 229

Query: 191 GGHWKTGLLVRAGIIRPK 205
           GG WK GL+V+  IIRPK
Sbjct: 230 GGKWKKGLVVKGIIIRPK 244

[Close]

BLAST of Sed0027219.1 vs. ExPASy TrEMBL
Match: Q39461 (Phloem protein 2 OS=Cucurbita argyrosperma OX=34294 GN=PP2 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 7.0e-36
Identity = 85/200 (42.50%), Postives = 119/200 (59.50%), Query Frame = 0


Query: 10  LKALLAEADGGLDLNS-CGIRNLLCNGVLLSNGTKKVVLDKSLNVYTIIFYARALTIAWI 69
           L  +L  AD  L   S   + + L  G+LL+ G  K + DK LN +    +ARAL+IAWI
Sbjct: 22  LDVILKNADVALHYPSFLKLYDQLVAGILLNKGAIKYIFDKKLNSHWYFIFARALSIAWI 81

Query: 70  DDRRYWRWTREGCGSSTEVAELIQVSWLDISGKIQASKLLAEIHYEIVFEIYIKTGASGF 129
           +D+RYW+W     GS  E+AELIQVSWLDI GKI+ S L   I YE+  ++ + +GASG+
Sbjct: 82  EDKRYWKW-----GSCNEIAELIQVSWLDIRGKIKESMLSPNIVYEVALQVQLNSGASGW 141

Query: 130 EIPVNLRLKVPNQCPQEHKVNLTTFPRDRWVDVSVGIFKLSASDICGCEDVEFSLYEHGG 189
             P+N+ LK PN    E +  L   P+++W ++ +  FK+         ++EF  YEHGG
Sbjct: 142 NHPMNIELKKPNGSKIERQECLLGKPKNQWFEIVIE-FKVDNHGCGSSGEIEFGFYEHGG 201

Query: 190 HWKTGLLVRAGIIRPKQLCG 209
           HWK+GLLV+   I  K  CG
Sbjct: 202 HWKSGLLVKGVRIGAKG-CG 214

[Close]

BLAST of Sed0027219.1 vs. ExPASy TrEMBL
Match: A0A7J7G6N9 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_027094 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 2.0e-35
Identity = 79/199 (39.70%), Postives = 121/199 (60.80%), Query Frame = 0


Query: 11  KALLAEADGGLDLNSCG-IRNLLCNGVLLSNGTKKVVLDKSLNVYTIIFYARALTIAWID 70
           +A++ +AD  +D +S   + + L +GV L+   KK  +++  N    + YAR L+I W  
Sbjct: 58  EAIIKDADSPIDKSSIDMLYDQLQSGVFLNQKRKKYWVERKTNSNCFMLYARDLSITWAQ 117

Query: 71  DRRYWRW--TREGCGSSTEVAELIQVSWLDISGKIQASKLLAEIHYEIVFEIYIKTGASG 130
           D RYW W    E    S +VAEL+ V WLDI GK + + L   + YE+VF + +K  + G
Sbjct: 118 DNRYWHWPYLNETSNESIDVAELLNVCWLDIHGKFETANLSHGVAYEVVFVVMLKDPSYG 177

Query: 131 FEIPVNLRLKVPNQCPQEHKVNLTTFPRDRWVDVSVGIFKLSASDICGCEDVEFSLYEH- 190
           +E+PVNLRL  P+   Q+H+ NL   PR +W+++  G F++S   I   ED++FSLYE+ 
Sbjct: 178 WEVPVNLRLITPDGTTQQHQENLMQKPRGQWIEIPAGEFRMSPEKI---EDIQFSLYEYN 237

Query: 191 GGHWKTGLLVRAGIIRPKQ 206
           GG WK GL+++   IRPK+
Sbjct: 238 GGQWKRGLVIKGVAIRPKK 253

[Close]

BLAST of Sed0027219.1 vs. ExPASy TrEMBL
Match: A0A1Q3B9A9 (PP2 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_07881 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 4.5e-35
Identity = 80/197 (40.61%), Postives = 119/197 (60.41%), Query Frame = 0


Query: 11  KALLAEADGGLDLNSCGIRNLLCNGVLLSNGTKKVVLDKSLNVYTIIFYARALTIAWIDD 70
           +A++ +AD  +D     + + LC GV L+   KK  ++K  N    + +AR L I W ++
Sbjct: 78  EAIIKDADSPIDKEK--LYDQLCAGVFLNQNRKKYWVEKKFNKNCFMLFARDLLITWSEN 137

Query: 71  RRYWRW--TREGCGSSTEVAELIQVSWLDISGKIQASKLLAEIHYEIVFEIYIKTGASGF 130
            R+W W   +E      +VAEL  V WL++ GK++ +KL  E  YE+ F I +K  A G+
Sbjct: 138 NRFWHWCSLKESSDVVVDVAELENVCWLEVHGKMETTKLSPETMYEVAFVIMMKDPAYGW 197

Query: 131 EIPVNLRLKVPNQCPQEHKVNLTTFPRDRWVDVSVGIFKLSASDICGCEDVEFSLYEH-G 190
           E+PVNLRL +PN   QEHK +L   PR +WV++ VG FK S+ ++    ++EFSLYE+ G
Sbjct: 198 EVPVNLRLTLPNGNKQEHKESLMIKPRGQWVEIPVGQFKTSSENV---GEIEFSLYEYEG 257

Query: 191 GHWKTGLLVRAGIIRPK 205
           G WK GL ++   IRPK
Sbjct: 258 GKWKKGLAIKGVFIRPK 269

[Close]

BLAST of Sed0027219.1 vs. ExPASy TrEMBL
Match: A0A2U1NVK8 (Phloem protein 2-A1 OS=Artemisia annua OX=35608 GN=CTI12_AA223620 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 7.7e-35
Identity = 81/197 (41.12%), Postives = 119/197 (60.41%), Query Frame = 0


Query: 11  KALLAEADGGLDLNSCGIRNLLCNGVLLSNGTKKVVLDKSLNVYTIIFYARALTIAWIDD 70
           +A++ +AD  +D +S    + L +GV L+   KK  +DK+ N    + +AR L++ W +D
Sbjct: 51  EAIIKDADTVIDKSSI---DKLYDGVFLNEKRKKYWVDKASNGNCFMVFARDLSVTWGED 110

Query: 71  RRYWRW---TREGCGSSTEVAELIQVSWLDISGKIQASKLLAEIHYEIVFEIYIKTGASG 130
            RYW W    +E      +VAEL+ V WLD++GK + SKL   I YE+VF + +K  A G
Sbjct: 111 SRYWCWPNINKETSEVVLDVAELLNVCWLDVNGKFEISKLTPGIKYEVVFVVMMKDSAYG 170

Query: 131 FEIPVNLRLKVPNQCPQEHKVNLTTFPRDRWVDVSVGIFKLSASDICGCEDVEFSLYEHG 190
           + +P+NL L +P+   QEH+ N+   PR +W ++ VG F + A +      VEFSLYEHG
Sbjct: 171 WGVPINLSLVLPDGSKQEHEENMNEKPRSKWFEIPVGEFMVEAKE---GGFVEFSLYEHG 230

Query: 191 GHWKTGLLVRAGIIRPK 205
           G WK GLLV+   IRPK
Sbjct: 231 GAWKNGLLVKGAAIRPK 241

[Close]

BLAST of Sed0027219.1 vs. TAIR 10
Match: AT4G19840.1 (phloem protein 2-A1 )

HSP 1 Score: 133.3 bits (334), Expect = 2.3e-31
Identity = 76/200 (38.00%), Postives = 108/200 (54.00%), Query Frame = 0


Query: 11  KALLAEADGGLDLNSCGIRNLLCNGVLLSNGTKKVVLDKSLNVYTIIFYARALTIAWIDD 70
           +A+L +AD  + L+S  +   L +GV L    +        N    + +A+ L+I W DD
Sbjct: 50  EAILRDADPPISLSSVNLSEQLRSGVFLKPKKQIKYWVDERNSNCFMLFAKNLSITWSDD 109

Query: 71  RRYWRW--TREGCGSSTEVAELIQVSWLDISGKIQASKLLAEIHYEIVFEIYIKTGASGF 130
             YW W   +E    + E   L  V WLDI+GK     L   I YE+VF++ ++  A G+
Sbjct: 110 VNYWTWFTEKESPNENVEAVGLKNVCWLDITGKFDTRNLTPGIVYEVVFKVKLEDPAYGW 169

Query: 131 EIPVNLRLKVPN--QCPQEHKVNLTTFPRDRWVDVSVGIFKLSASDICGCEDVEFSLYEH 190
           + PVNL+L +PN  + PQE KV+L   PR +WVDV VG F    S      ++ FS+YEH
Sbjct: 170 DTPVNLKLVLPNGKEKPQEKKVSLRELPRYKWVDVRVGEFVPEKS---AAGEITFSMYEH 229

Query: 191 -GGHWKTGLLVRAGIIRPKQ 206
             G WK GL ++   IRPKQ
Sbjct: 230 AAGVWKKGLSLKGVAIRPKQ 246

[Close]

BLAST of Sed0027219.1 vs. TAIR 10
Match: AT1G33920.1 (phloem protein 2-A4 )

HSP 1 Score: 106.3 bits (264), Expect = 3.0e-23
Identity = 61/155 (39.35%), Postives = 87/155 (56.13%), Query Frame = 0


Query: 57  IFYARALTIAWIDDRRYWRWTREGCGSSTE----VAELIQVSWLDISGKIQASKLLAEIH 116
           + YAR L+IAW D   YW W       S+E     A L  V WLD++GK    +L  E  
Sbjct: 13  MIYARDLSIAWSDKDEYWSWLPLRYDISSEKLVDAAVLEAVCWLDVNGKFDTRELTLETT 72

Query: 117 YEIVFEIYIKTGASGFEIPVNLRLKVPN--QCPQEHKVNLTTFPRDRWVDVSVGIFKLSA 176
           YE+V+ + ++  ASG+ IPVNL+L +P+  + PQE  + L      RW+D+S G F +++
Sbjct: 73  YEVVYVVKLEDTASGWNIPVNLKLTLPDGKKRPQERSMCLKEHIGKRWIDISAGEF-VTS 132

Query: 177 SDICGCEDVEFSLYE-HGGHWKTGLLVRAGIIRPK 205
            D  G  ++ FS+YE     WK GL V+   IRPK
Sbjct: 133 PDNAG--EISFSMYETKSCCWKRGLFVKCVEIRPK 164

[Close]

BLAST of Sed0027219.1 vs. TAIR 10
Match: AT4G19850.1 (lectin-related )

HSP 1 Score: 91.3 bits (225), Expect = 1.0e-18
Identity = 43/121 (35.54%), Postives = 71/121 (58.68%), Query Frame = 0


Query: 85  TEVAELIQVSWLDISGKIQASKLLAEIHYEIVFEIYIKTGASGFEIPVNLRLKVPNQCPQ 144
           TEVA++ +V+WL++ GK +  KL     YE+VF + +   A G++  VN +L +P    +
Sbjct: 75  TEVAKMERVAWLEVVGKFETEKLTPNSLYEVVFVVKLIDSAKGWDFRVNFKLVLPTGETK 134

Query: 145 EHKVNLTTFPRDRWVDVSVGIFKLSASDICGCEDVEFSLYE-HGGHWKTGLLVRAGIIRP 204
           E + N+    R++WV++  G F +S   + G   +EFS+ E     WK+GL+V+   IRP
Sbjct: 135 ERRENVNLLERNKWVEIPAGEFMISPEHLSG--KIEFSMLEVKSDQWKSGLIVKGVAIRP 193

[Close]

BLAST of Sed0027219.1 vs. TAIR 10
Match: AT4G19850.2 (lectin-related )

HSP 1 Score: 83.6 bits (205), Expect = 2.1e-16
Identity = 40/125 (32.00%), Postives = 70/125 (56.00%), Query Frame = 0


Query: 57  IFYARALTIAWIDDR--RYWRWTREGCGSS----TEVAELIQVSWLDISGKIQASKLLAE 116
           + YAR L+I W + +  +YW W  +   +S    TEVA++ +V+WL++ GK +  KL   
Sbjct: 66  MLYARDLSITWAESQTNKYWSWFSDLDQTSSDVRTEVAKMERVAWLEVVGKFETEKLTPN 125

Query: 117 IHYEIVFEIYIKTGASGFEIPVNLRLKVPNQCPQEHKVNLTTFPRDRWVDVSVGIFKLSA 176
             YE+VF + +   A G++  VN +L +P    +E + N+    R++WV++  G F +S 
Sbjct: 126 SLYEVVFVVKLIDSAKGWDFRVNFKLVLPTGETKERRENVNLLERNKWVEIPAGEFMISP 185

[Close]

BLAST of Sed0027219.1 vs. TAIR 10
Match: AT5G45090.1 (phloem protein 2-A7 )

HSP 1 Score: 79.7 bits (195), Expect = 3.0e-15
Identity = 55/177 (31.07%), Postives = 86/177 (48.59%), Query Frame = 0


Query: 37  LLSNGTKKVVLDKSLNVYTIIFYARALTIAWIDDRRYWRWT---REGCGSSTEVAELIQV 96
           LL+N +  V  +K  N    +  AR L ++  +    W W+        ++ EVA L +V
Sbjct: 158 LLANISVGVYREKEANSKCFMVPARKLQMSHSEKLINWTWSSIYETPNDAAIEVAMLNEV 217

Query: 97  SWLDISGKIQASKLLAEIHYEIVFEIYIKTGASGFEIPVNLRLKVPN----QCPQEHKVN 156
            WL +SG      L     YE+VF + +   +SG+E PVNL LKV N    +  QE + +
Sbjct: 218 HWLHMSGNFHTRNLTPGTKYEVVFLVSLDDTSSGWEQPVNLNLKVINPDGTESLQERETS 277

Query: 157 LTTFPRDRWVDVSVGIFKLSASDICGCEDVEFSLYEH-GGHWKTGLLVRAGIIRPKQ 206
           L     + WVD+  G+  L A        + F++Y++     K+GL+V+   IRP Q
Sbjct: 278 LECHIGENWVDIQAGV--LVAPPRNAAAKMTFTMYQYVTSDRKSGLVVKGVAIRPMQ 332

The following BLAST results are available for this feature:

BLAST of Sed0027219.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KDP23149.1	7.7e-37	43.43	hypothetical protein JCGZ_00141 [Jatropha curcas]	[more]
XP_012089530.1	7.7e-37	43.43	lectin [Jatropha curcas]	[more]
XP_038888354.1	2.9e-36	44.83	lectin-like [Benincasa hispida]	[more]
AAA92465.1	1.4e-35	42.50	phloem protein 2 [Cucurbita argyrosperma]	[more]
KAF5935965.1	4.2e-35	39.70	hypothetical protein HYC85_027094 [Camellia sinensis]	[more]

BLAST of Sed0027219.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C0HJV2	3.7e-34	44.19	Lectin OS=Luffa acutangula OX=56866 PE=1 SV=1	[more]
O81865	3.2e-30	38.00	Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana OX=3702 GN=PP2A1 PE=2 S...	[more]
P0DSP5	1.1e-22	36.23	Lectin OS=Coccinia grandis OX=387127 PE=1 SV=1	[more]
Q9C8U9	4.2e-22	39.35	Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 OS=Arabidopsis thaliana OX=3702...	[more]
O81866	1.4e-17	35.54	Protein PHLOEM PROTEIN 2-LIKE A2 OS=Arabidopsis thaliana OX=3702 GN=PP2A2 PE=2 S...	[more]

BLAST of Sed0027219.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A067JUE7	3.7e-37	43.43	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_00141 PE=4 SV=1	[more]
Q39461	7.0e-36	42.50	Phloem protein 2 OS=Cucurbita argyrosperma OX=34294 GN=PP2 PE=2 SV=1	[more]
A0A7J7G6N9	2.0e-35	39.70	Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_027094 PE=4 SV=1	[more]
A0A1Q3B9A9	4.5e-35	40.61	PP2 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_0788...	[more]
A0A2U1NVK8	7.7e-35	41.12	Phloem protein 2-A1 OS=Artemisia annua OX=35608 GN=CTI12_AA223620 PE=4 SV=1	[more]

BLAST of Sed0027219.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19840.1	2.3e-31	38.00	phloem protein 2-A1	[more]
AT1G33920.1	3.0e-23	39.35	phloem protein 2-A4	[more]
AT4G19850.1	1.0e-18	35.54	lectin-related	[more]
AT4G19850.2	2.1e-16	32.00	lectin-related	[more]
AT5G45090.1	3.0e-15	31.07	phloem protein 2-A7	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 56..203 e-value: 5.7E-33 score: 114.0
None	No IPR available	PANTHER	PTHR32278:SF42	PROTEIN PHLOEM PROTEIN 2-LIKE A2	coord: 29..202
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 29..202

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0027219	Sed0027219	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0027219.1-three_prime_utr	Sed0027219.1-three_prime_utr-LG08:34006884..34007106	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0027219.1-exon	Sed0027219.1-exon-LG08:34006884..34007491	exon
Sed0027219.1-exon	Sed0027219.1-exon-LG08:34007574..34007686	exon
Sed0027219.1-exon	Sed0027219.1-exon-LG08:34007883..34008051	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0027219.1-cds	Sed0027219.1-cds-LG08:34007107..34007491	CDS
Sed0027219.1-cds	Sed0027219.1-cds-LG08:34007574..34007686	CDS
Sed0027219.1-cds	Sed0027219.1-cds-LG08:34007883..34008011	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0027219.1-five_prime_utr	Sed0027219.1-five_prime_utr-LG08:34008012..34008051	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0027219.1	Sed0027219.1-protein	polypeptide