Sed0026632.1 (mRNA) Chayote v1

Overview


Name	Sed0026632.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Ethylene-responsive transcription factor
Location	LG10: 32751299 .. 32752091 (+)
Sequence length	793
RNA-Seq Expression	Sed0026632.1
Synteny	Sed0026632.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAAATTCATGATCTTTTAACCTTTTATTTTATATATATATATATAATTAGTTTGAAAACAACCTCTTTTTTACCTTATTTTTTCAGAACCACTCTTTTTGTCTTCATTTTAATATCATACTTATAAGTCATTGCCATGGAACCAAGTTATAGAGGAGTCCGCAAGCGCAAATGGGGCAAATGGGTGTCCGAAATCCGCGAGCCCGGCAAAAAAACCCGAATCTGGCTCGGCAGTTACGACCTCCCCGAGATGGCTGCCGCTGCCTACGATGTCGCCGCGCTCTTCCTCCGTGGCACGGACGCCCGCCTCAACTTCCCCGAGCTCGCACATTCCTTCCCTCGCCCCCCGACCTCCACCCCCGAGGACATCCAGACCACGGCGCAGATGGCTGCATTGCAGATGAGGAACCATAATAATAATAATAATACCAATAAGCCGGCCGGGGCGCCGGGCCCGGTTCGAGTCGGGCTGTCGCCGAGCCAAATTCAAGCCATTAACGAGTCGCCGTTGGACTCTCCAACGATGTGGATGCAGATGGCGGCGGAGGCGCTGTGTTTAGAGGAAGAGTCGTCTGTGTTTTCATGTGATGGGTTTGAGGAGTGGGAGGATCATGACATGCACCATCACTCTATTTGGGATTCTTCACTCTAATTATGTTTTTTTGTCCTTAATTGCTTCTTCTAATTAACTCTTAATCATAATTTAATATGTATTATTATTTCATTCTACACTCTCTTACTTTCTTTCTTTGAGAGAAGAAAATACCTATATAAAATTTTATATGTTATACA

mRNA sequence

CACAAATTCATGATCTTTTAACCTTTTATTTTATATATATATATATAATTAGTTTGAAAACAACCTCTTTTTTACCTTATTTTTTCAGAACCACTCTTTTTGTCTTCATTTTAATATCATACTTATAAGTCATTGCCATGGAACCAAGTTATAGAGGAGTCCGCAAGCGCAAATGGGGCAAATGGGTGTCCGAAATCCGCGAGCCCGGCAAAAAAACCCGAATCTGGCTCGGCAGTTACGACCTCCCCGAGATGGCTGCCGCTGCCTACGATGTCGCCGCGCTCTTCCTCCGTGGCACGGACGCCCGCCTCAACTTCCCCGAGCTCGCACATTCCTTCCCTCGCCCCCCGACCTCCACCCCCGAGGACATCCAGACCACGGCGCAGATGGCTGCATTGCAGATGAGGAACCATAATAATAATAATAATACCAATAAGCCGGCCGGGGCGCCGGGCCCGGTTCGAGTCGGGCTGTCGCCGAGCCAAATTCAAGCCATTAACGAGTCGCCGTTGGACTCTCCAACGATGTGGATGCAGATGGCGGCGGAGGCGCTGTGTTTAGAGGAAGAGTCGTCTGTGTTTTCATGTGATGGGTTTGAGGAGTGGGAGGATCATGACATGCACCATCACTCTATTTGGGATTCTTCACTCTAATTATGTTTTTTTGTCCTTAATTGCTTCTTCTAATTAACTCTTAATCATAATTTAATATGTATTATTATTTCATTCTACACTCTCTTACTTTCTTTCTTTGAGAGAAGAAAATACCTATATAAAATTTTATATGTTATACA

Coding sequence (CDS)

ATGGAACCAAGTTATAGAGGAGTCCGCAAGCGCAAATGGGGCAAATGGGTGTCCGAAATCCGCGAGCCCGGCAAAAAAACCCGAATCTGGCTCGGCAGTTACGACCTCCCCGAGATGGCTGCCGCTGCCTACGATGTCGCCGCGCTCTTCCTCCGTGGCACGGACGCCCGCCTCAACTTCCCCGAGCTCGCACATTCCTTCCCTCGCCCCCCGACCTCCACCCCCGAGGACATCCAGACCACGGCGCAGATGGCTGCATTGCAGATGAGGAACCATAATAATAATAATAATACCAATAAGCCGGCCGGGGCGCCGGGCCCGGTTCGAGTCGGGCTGTCGCCGAGCCAAATTCAAGCCATTAACGAGTCGCCGTTGGACTCTCCAACGATGTGGATGCAGATGGCGGCGGAGGCGCTGTGTTTAGAGGAAGAGTCGTCTGTGTTTTCATGTGATGGGTTTGAGGAGTGGGAGGATCATGACATGCACCATCACTCTATTTGGGATTCTTCACTCTAA

Protein sequence

MEPSYRGVRKRKWGKWVSEIREPGKKTRIWLGSYDLPEMAAAAYDVAALFLRGTDARLNFPELAHSFPRPPTSTPEDIQTTAQMAALQMRNHNNNNNTNKPAGAPGPVRVGLSPSQIQAINESPLDSPTMWMQMAAEALCLEEESSVFSCDGFEEWEDHDMHHHSIWDSSL

Homology

[Close]

BLAST of Sed0026632.1 vs. NCBI nr
Match: XP_038890934.1 (ethylene-responsive transcription factor ERF022 [Benincasa hispida])

HSP 1 Score: 230.7 bits (587), Expect = 9.4e-57
Identity = 123/169 (72.78%), Postives = 132/169 (78.11%), Query Frame = 0


Query: 2   EPSYRGVRKRKWGKWVSEIREPGKKTRIWLGSYDLPEMAAAAYDVAALFLRGTDARLNFP 61
           EP+YRGVRKRKWGKWVSEIREPGKKTRIWLGSY LPEMAAAAYDVAAL LRG +ARLNFP
Sbjct: 4   EPNYRGVRKRKWGKWVSEIREPGKKTRIWLGSYHLPEMAAAAYDVAALHLRGPEARLNFP 63

Query: 62  ELAHSFPRPPTSTPEDIQTTAQMAALQMRNHNNNNNTNKPAGAPGPVRVGLSPSQIQAIN 121
           ELA SFPRP +S+P+ IQ  A MAALQ  N        KP   P PVRVGLSPSQIQAIN
Sbjct: 64  ELAESFPRPASSSPDHIQAAAHMAALQFAN-------TKPPEPPAPVRVGLSPSQIQAIN 123

Query: 122 ESPLDSPTMWMQMAAEALCLEEESSVFSCDGFEEWEDHDMHHHSIWDSS 171
           ESPLDSPTMWMQMAAEAL L+        D  EE+  ++MHHHSIWD S
Sbjct: 124 ESPLDSPTMWMQMAAEALSLQPH------DLDEEY--YNMHHHSIWDYS 157

[Close]

BLAST of Sed0026632.1 vs. NCBI nr
Match: XP_008459595.1 (PREDICTED: ethylene-responsive transcription factor ERF022-like [Cucumis melo])

HSP 1 Score: 228.8 bits (582), Expect = 3.6e-56
Identity = 121/176 (68.75%), Postives = 131/176 (74.43%), Query Frame = 0


Query: 1   MEPSYRGVRKRKWGKWVSEIREPGKKTRIWLGSYDLPEMAAAAYDVAALFLRGTDARLNF 60
           M+P+YRGVRKRKWGKWVSEIREPGKKTRIWLGSY LPEMAAAAYDVAAL LRG DARLNF
Sbjct: 1   MDPNYRGVRKRKWGKWVSEIREPGKKTRIWLGSYHLPEMAAAAYDVAALHLRGPDARLNF 60

Query: 61  PELAHSFPRPPTSTPEDIQTTAQMAALQMRNHNNNNNTNKPAGAPGPVRVGLSPSQIQAI 120
           P+LA SFPRP +S+P+ IQ  A MAAL+        NT KP   P PVRVGLSPSQIQAI
Sbjct: 61  PDLADSFPRPASSSPDHIQAAAHMAALRFA------NTCKPPEPPAPVRVGLSPSQIQAI 120

Query: 121 NESPLDSPTMWMQMAAEALCLEEESSVFSCDGFEEWEDH--------DMHHHSIWD 169
           NESPLDSPTMWMQMAAEAL L+            EW+D          +HHHSIWD
Sbjct: 121 NESPLDSPTMWMQMAAEALSLQP----------REWDDEYNYNNNNMQLHHHSIWD 160

[Close]

BLAST of Sed0026632.1 vs. NCBI nr
Match: KAG7037163.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 228.0 bits (580), Expect = 6.1e-56
Identity = 125/172 (72.67%), Postives = 137/172 (79.65%), Query Frame = 0


Query: 1   MEPSYRGVRKRKWGKWVSEIREPGKKTRIWLGSYDLPEMAAAAYDVAALFLRGTDARLNF 60
           MEP+YRGVRKRKWGKWVSEIR+PGKKTRIWLGSYD P MAAAAYDVAAL LRG +A+LNF
Sbjct: 1   MEPTYRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGRNAQLNF 60

Query: 61  PELAHSFPRPPTSTPEDIQTTAQMAALQMRNHNNNNNTNKPAGAPGPVRVGLSPSQIQAI 120
           PELA +FPRP +S  EDIQ+ AQMAAL+MRN         P GA  PVRVGLS S+IQAI
Sbjct: 61  PELAETFPRPESSRAEDIQSAAQMAALRMRN---------PVGA-APVRVGLSESEIQAI 120

Query: 121 NESPLDSP-TMWMQMA--AEALCLEEESSVFSCDGFEEWEDHDMHHHSIWDS 170
           NESPLDSP TMWMQMA  AEA+CLEEES      GF+E ED+   HHSIWDS
Sbjct: 121 NESPLDSPRTMWMQMAAEAEAVCLEEES------GFDEGEDNITTHHSIWDS 156

[Close]

BLAST of Sed0026632.1 vs. NCBI nr
Match: KAG6607516.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 228.0 bits (580), Expect = 6.1e-56
Identity = 125/172 (72.67%), Postives = 137/172 (79.65%), Query Frame = 0


Query: 1   MEPSYRGVRKRKWGKWVSEIREPGKKTRIWLGSYDLPEMAAAAYDVAALFLRGTDARLNF 60
           MEP+YRGVRKRKWGKWVSEIR+PGKKTRIWLGSYD P MAAAAYDVAAL LRG +A+LNF
Sbjct: 1   MEPTYRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGRNAQLNF 60

Query: 61  PELAHSFPRPPTSTPEDIQTTAQMAALQMRNHNNNNNTNKPAGAPGPVRVGLSPSQIQAI 120
           PELA +FPRP +S  EDIQ+ AQMAAL+MRN         P GA  PVRVGLS S+IQAI
Sbjct: 61  PELAETFPRPESSRAEDIQSAAQMAALRMRN---------PVGA-APVRVGLSESEIQAI 120

Query: 121 NESPLDSP-TMWMQMA--AEALCLEEESSVFSCDGFEEWEDHDMHHHSIWDS 170
           NESPLDSP TMWMQMA  AEA+CLEEES      GF+E ED+   HHSIWDS
Sbjct: 121 NESPLDSPRTMWMQMAVEAEAVCLEEES------GFDEGEDNITTHHSIWDS 156

[Close]

BLAST of Sed0026632.1 vs. NCBI nr
Match: XP_022973437.1 (ethylene-responsive transcription factor ERF022-like [Cucurbita maxima])

HSP 1 Score: 227.3 bits (578), Expect = 1.0e-55
Identity = 124/170 (72.94%), Postives = 136/170 (80.00%), Query Frame = 0


Query: 1   MEPSYRGVRKRKWGKWVSEIREPGKKTRIWLGSYDLPEMAAAAYDVAALFLRGTDARLNF 60
           MEP+YRGVRKRKWGKWVSEIR+PGKKTRIWLGSYD P MAAAAYDVAAL LRG +A LNF
Sbjct: 1   MEPTYRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGRNAHLNF 60

Query: 61  PELAHSFPRPPTSTPEDIQTTAQMAALQMRNHNNNNNTNKPAGAPGPVRVGLSPSQIQAI 120
           PELA +FPRP +S  EDIQ+ AQMAALQMRN         P GA  PVRVGLS S+IQAI
Sbjct: 61  PELAETFPRPESSRAEDIQSAAQMAALQMRN---------PVGA-APVRVGLSESEIQAI 120

Query: 121 NESPLDSP-TMWMQMAAEALCLEEESSVFSCDGFEEWEDHDMHHHSIWDS 170
           NESPLDSP TMWMQMAAEA+CLEEE+      GF+E ED ++ H SIWDS
Sbjct: 121 NESPLDSPRTMWMQMAAEAVCLEEET------GFDEGED-NITHRSIWDS 153

[Close]

BLAST of Sed0026632.1 vs. ExPASy Swiss-Prot
Match: Q9LQ28 (Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana OX=3702 GN=ERF022 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.4e-39
Identity = 97/170 (57.06%), Postives = 110/170 (64.71%), Query Frame = 0


Query: 4   SYRGVRKRKWGKWVSEIREPGKKTRIWLGSYDLPEMAAAAYDVAALFLRGTDARLNFPEL 63
           SYRG+R+RKWGKWVSEIREPGKKTRIWLGSY+  EMAAAAYD AAL LRG    LNFPEL
Sbjct: 19  SYRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPEL 78

Query: 64  AHSFPRPPTSTPEDIQTTAQMAALQMRNHNNNNNTNKPA--GAPGPVRVGLSPSQIQAIN 123
             SFPRP +S+ E IQ  AQ AAL  +        ++PA     G  RVGLSP QIQAIN
Sbjct: 79  VDSFPRPESSSSEHIQAAAQDAALMFK----PGRLSEPALESGQGLSRVGLSPDQIQAIN 138

Query: 124 ESPLDSPTM-WMQMAAEALCLEEESSVFSCDGFEEWEDHDMHHHSIWDSS 171
           ESPLDSP M WMQ    A   E     F     +E+ +      SIW+S+
Sbjct: 139 ESPLDSPRMGWMQDLEVADYEELYGQFFGQHDRDEFFEM-QQFQSIWNSN 183

[Close]

BLAST of Sed0026632.1 vs. ExPASy Swiss-Prot
Match: Q9C9I2 (Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana OX=3702 GN=ERF021 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.9e-32
Identity = 74/132 (56.06%), Postives = 85/132 (64.39%), Query Frame = 0


Query: 4   SYRGVRKRKWGKWVSEIREPGKKTRIWLGSYDLPEMAAAAYDVAALFLRGTDARLNFPEL 63
           +YRGVRKRKWGKWVSEIREPG K RIWLGS++ PEMAA AYDVAA   RG +ARLNFPEL
Sbjct: 23  AYRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMAATAYDVAAFHFRGREARLNFPEL 82

Query: 64  AHSFPRPPTSTPEDIQTTAQMAALQMRNHNNNNNTNKPAGAP---GPVRVGLSPSQIQAI 123
           A S PRP  S+ + I+     A L        +     + +     P  V LSP +IQAI
Sbjct: 83  ASSLPRPADSSSDSIRMAVHEATLCRTTEGTESAMQVDSSSSSNVAPTMVRLSPREIQAI 142

Query: 124 NESPLDSPTMWM 133
           NES L SPT  M
Sbjct: 143 NESTLGSPTTMM 154

[Close]

BLAST of Sed0026632.1 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 8.0e-27
Identity = 59/84 (70.24%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 3   PSYRGVRKRKWGKWVSEIREPGKKTRIWLGSYDLPEMAAAAYDVAALFLRGTDARLNFPE 62
           P YRGVR R WGKWVSEIREP KK+RIWLG++  PEMAA A+DVAAL ++GT A LNFPE
Sbjct: 49  PVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFPE 108

Query: 63  LAHSFPRPPTSTPEDIQTTAQMAA 87
           LA SFPRP + +P DIQT A  AA
Sbjct: 109 LADSFPRPVSLSPRDIQTAALKAA 132

[Close]

BLAST of Sed0026632.1 vs. ExPASy Swiss-Prot
Match: Q1ECI2 (Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana OX=3702 GN=ERF023 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.0e-26
Identity = 57/84 (67.86%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 3   PSYRGVRKRKWGKWVSEIREPGKKTRIWLGSYDLPEMAAAAYDVAALFLRGTDARLNFPE 62
           P Y GVRKR+WGKWVSEIREP KK+RIWLGS+ +PEMAA AYDVAA  L+G  A+LNFPE
Sbjct: 43  PVYHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPE 102

Query: 63  LAHSFPRPPTSTPEDIQTTAQMAA 87
                PRP T TP DIQ  A  AA
Sbjct: 103 EIEDLPRPSTCTPRDIQVAAAKAA 126

[Close]

BLAST of Sed0026632.1 vs. ExPASy Swiss-Prot
Match: Q8LBQ7 (Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana OX=3702 GN=ERF034 PE=2 SV=2)

HSP 1 Score: 119.8 bits (299), Expect = 3.0e-26
Identity = 58/100 (58.00%), Postives = 76/100 (76.00%), Query Frame = 0


Query: 3   PSYRGVRKRKWGKWVSEIREPGKKTRIWLGSYDLPEMAAAAYDVAALFLRGTDARLNFPE 62
           P+YRGVR R WGKWVSEIREP KK+RIWLG+Y   EMAA A+DVAAL ++GT A LNFP+
Sbjct: 98  PTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPK 157

Query: 63  LAHSFPRPPTSTPEDIQTTAQMAALQMRNHNNNNNTNKPA 103
           LA   PRP T++P+DIQ  A +AA+  ++  N+ + ++ A
Sbjct: 158 LAGELPRPVTNSPKDIQAAASLAAVNWQDSVNDVSNSEVA 197

[Close]

BLAST of Sed0026632.1 vs. ExPASy TrEMBL
Match: A0A1S3CAN7 (ethylene-responsive transcription factor ERF022-like OS=Cucumis melo OX=3656 GN=LOC103498680 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.7e-56
Identity = 121/176 (68.75%), Postives = 131/176 (74.43%), Query Frame = 0


Query: 1   MEPSYRGVRKRKWGKWVSEIREPGKKTRIWLGSYDLPEMAAAAYDVAALFLRGTDARLNF 60
           M+P+YRGVRKRKWGKWVSEIREPGKKTRIWLGSY LPEMAAAAYDVAAL LRG DARLNF
Sbjct: 1   MDPNYRGVRKRKWGKWVSEIREPGKKTRIWLGSYHLPEMAAAAYDVAALHLRGPDARLNF 60

Query: 61  PELAHSFPRPPTSTPEDIQTTAQMAALQMRNHNNNNNTNKPAGAPGPVRVGLSPSQIQAI 120
           P+LA SFPRP +S+P+ IQ  A MAAL+        NT KP   P PVRVGLSPSQIQAI
Sbjct: 61  PDLADSFPRPASSSPDHIQAAAHMAALRFA------NTCKPPEPPAPVRVGLSPSQIQAI 120

Query: 121 NESPLDSPTMWMQMAAEALCLEEESSVFSCDGFEEWEDH--------DMHHHSIWD 169
           NESPLDSPTMWMQMAAEAL L+            EW+D          +HHHSIWD
Sbjct: 121 NESPLDSPTMWMQMAAEALSLQP----------REWDDEYNYNNNNMQLHHHSIWD 160

[Close]

BLAST of Sed0026632.1 vs. ExPASy TrEMBL
Match: A0A6J1I7I6 (ethylene-responsive transcription factor ERF022-like OS=Cucurbita maxima OX=3661 GN=LOC111471982 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 5.0e-56
Identity = 124/170 (72.94%), Postives = 136/170 (80.00%), Query Frame = 0


Query: 1   MEPSYRGVRKRKWGKWVSEIREPGKKTRIWLGSYDLPEMAAAAYDVAALFLRGTDARLNF 60
           MEP+YRGVRKRKWGKWVSEIR+PGKKTRIWLGSYD P MAAAAYDVAAL LRG +A LNF
Sbjct: 1   MEPTYRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGRNAHLNF 60

Query: 61  PELAHSFPRPPTSTPEDIQTTAQMAALQMRNHNNNNNTNKPAGAPGPVRVGLSPSQIQAI 120
           PELA +FPRP +S  EDIQ+ AQMAALQMRN         P GA  PVRVGLS S+IQAI
Sbjct: 61  PELAETFPRPESSRAEDIQSAAQMAALQMRN---------PVGA-APVRVGLSESEIQAI 120

Query: 121 NESPLDSP-TMWMQMAAEALCLEEESSVFSCDGFEEWEDHDMHHHSIWDS 170
           NESPLDSP TMWMQMAAEA+CLEEE+      GF+E ED ++ H SIWDS
Sbjct: 121 NESPLDSPRTMWMQMAAEAVCLEEET------GFDEGED-NITHRSIWDS 153

[Close]

BLAST of Sed0026632.1 vs. ExPASy TrEMBL
Match: A0A6J1GCA4 (ethylene-responsive transcription factor ERF022-like OS=Cucurbita moschata OX=3662 GN=LOC111452674 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.1e-55
Identity = 124/172 (72.09%), Postives = 136/172 (79.07%), Query Frame = 0


Query: 1   MEPSYRGVRKRKWGKWVSEIREPGKKTRIWLGSYDLPEMAAAAYDVAALFLRGTDARLNF 60
           MEP+YRGVRKRKWGKWVSEIR+PGKKTRIWLGSYD P MAAAAYDVAAL LRG +A+LNF
Sbjct: 1   MEPTYRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGRNAQLNF 60

Query: 61  PELAHSFPRPPTSTPEDIQTTAQMAALQMRNHNNNNNTNKPAGAPGPVRVGLSPSQIQAI 120
           PELA +FPRP +S  EDIQ+ AQMAAL+MRN         P GA  P RVGLS S+IQAI
Sbjct: 61  PELAETFPRPESSRAEDIQSAAQMAALRMRN---------PVGA-APFRVGLSESEIQAI 120

Query: 121 NESPLDSP-TMWMQMA--AEALCLEEESSVFSCDGFEEWEDHDMHHHSIWDS 170
           NESPLDSP TMWMQMA  AEA+CLEEES      GF+E ED+   HHSIWDS
Sbjct: 121 NESPLDSPRTMWMQMAAEAEAVCLEEES------GFDEGEDNITTHHSIWDS 156

[Close]

BLAST of Sed0026632.1 vs. ExPASy TrEMBL
Match: A0A6J1EBQ6 (ethylene-responsive transcription factor ERF022-like OS=Cucurbita moschata OX=3662 GN=LOC111432747 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.5e-55
Identity = 119/172 (69.19%), Postives = 133/172 (77.33%), Query Frame = 0


Query: 2   EPSYRGVRKRKWGKWVSEIREPGKKTRIWLGSYDLPEMAAAAYDVAALFLRGTDARLNFP 61
           EP+Y GVRKRKWGKWVSEIR+PGKKTRIWLGSY LP+MAAAAYDVAAL LRG +ARLNFP
Sbjct: 3   EPTYTGVRKRKWGKWVSEIRQPGKKTRIWLGSYHLPQMAAAAYDVAALHLRGPNARLNFP 62

Query: 62  ELAHSFPRPPTSTPEDIQTTAQMAALQMRNHNNNNNTNKPAGA---PGPVRVGLSPSQIQ 121
           +L  SFPRP TS+P+DIQ  A MAAL++       NT  P  A   P PVR+GLSPSQIQ
Sbjct: 63  DLIDSFPRPATSSPDDIQAAAHMAALRLA------NTKPPPAAQHPPAPVRIGLSPSQIQ 122

Query: 122 AINESPLDSPTMWMQMAAEALCLEEESSVFSCDGFEEWEDHDMHHHSIWDSS 171
           AINESPLDSPTMWMQMAAEALCLE+    + CDGF      D+  +SIWD S
Sbjct: 123 AINESPLDSPTMWMQMAAEALCLED----YLCDGF------DVEDNSIWDYS 158

[Close]

BLAST of Sed0026632.1 vs. ExPASy TrEMBL
Match: A0A6J1IA08 (ethylene-responsive transcription factor ERF022-like OS=Cucurbita maxima OX=3661 GN=LOC111472569 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.1e-54
Identity = 118/172 (68.60%), Postives = 132/172 (76.74%), Query Frame = 0


Query: 2   EPSYRGVRKRKWGKWVSEIREPGKKTRIWLGSYDLPEMAAAAYDVAALFLRGTDARLNFP 61
           EP+Y GVRKRKWGKWVSEIR+PGKKTRIWLGSY LP+MAAAAYDVAAL LRG +ARLNFP
Sbjct: 3   EPTYTGVRKRKWGKWVSEIRQPGKKTRIWLGSYHLPQMAAAAYDVAALHLRGPNARLNFP 62

Query: 62  ELAHSFPRPPTSTPEDIQTTAQMAALQMRNHNNNNNTNKPAGA---PGPVRVGLSPSQIQ 121
           +L  SFPRP TS+P+DIQ  A MAAL++       NT  P  A   P PVR+GLSPSQIQ
Sbjct: 63  DLIDSFPRPATSSPDDIQAAAHMAALRLA------NTKPPPAAQHPPAPVRIGLSPSQIQ 122

Query: 122 AINESPLDSPTMWMQMAAEALCLEEESSVFSCDGFEEWEDHDMHHHSIWDSS 171
           AINESPLDSPTMWMQMAAEAL LE+    + CDGF      D+  +SIWD S
Sbjct: 123 AINESPLDSPTMWMQMAAEALSLED----YLCDGF------DVEDNSIWDYS 158

[Close]

BLAST of Sed0026632.1 vs. TAIR 10
Match: AT1G33760.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 162.2 bits (409), Expect = 3.8e-40
Identity = 97/170 (57.06%), Postives = 110/170 (64.71%), Query Frame = 0


Query: 4   SYRGVRKRKWGKWVSEIREPGKKTRIWLGSYDLPEMAAAAYDVAALFLRGTDARLNFPEL 63
           SYRG+R+RKWGKWVSEIREPGKKTRIWLGSY+  EMAAAAYD AAL LRG    LNFPEL
Sbjct: 19  SYRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPEL 78

Query: 64  AHSFPRPPTSTPEDIQTTAQMAALQMRNHNNNNNTNKPA--GAPGPVRVGLSPSQIQAIN 123
             SFPRP +S+ E IQ  AQ AAL  +        ++PA     G  RVGLSP QIQAIN
Sbjct: 79  VDSFPRPESSSSEHIQAAAQDAALMFK----PGRLSEPALESGQGLSRVGLSPDQIQAIN 138

Query: 124 ESPLDSPTM-WMQMAAEALCLEEESSVFSCDGFEEWEDHDMHHHSIWDSS 171
           ESPLDSP M WMQ    A   E     F     +E+ +      SIW+S+
Sbjct: 139 ESPLDSPRMGWMQDLEVADYEELYGQFFGQHDRDEFFEM-QQFQSIWNSN 183

[Close]

BLAST of Sed0026632.1 vs. TAIR 10
Match: AT1G71450.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 139.0 bits (349), Expect = 3.4e-33
Identity = 74/132 (56.06%), Postives = 85/132 (64.39%), Query Frame = 0


Query: 4   SYRGVRKRKWGKWVSEIREPGKKTRIWLGSYDLPEMAAAAYDVAALFLRGTDARLNFPEL 63
           +YRGVRKRKWGKWVSEIREPG K RIWLGS++ PEMAA AYDVAA   RG +ARLNFPEL
Sbjct: 23  AYRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMAATAYDVAAFHFRGREARLNFPEL 82

Query: 64  AHSFPRPPTSTPEDIQTTAQMAALQMRNHNNNNNTNKPAGAP---GPVRVGLSPSQIQAI 123
           A S PRP  S+ + I+     A L        +     + +     P  V LSP +IQAI
Sbjct: 83  ASSLPRPADSSSDSIRMAVHEATLCRTTEGTESAMQVDSSSSSNVAPTMVRLSPREIQAI 142

Query: 124 NESPLDSPTMWM 133
           NES L SPT  M
Sbjct: 143 NESTLGSPTTMM 154

[Close]

BLAST of Sed0026632.1 vs. TAIR 10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 121.7 bits (304), Expect = 5.7e-28
Identity = 59/84 (70.24%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 3   PSYRGVRKRKWGKWVSEIREPGKKTRIWLGSYDLPEMAAAAYDVAALFLRGTDARLNFPE 62
           P YRGVR R WGKWVSEIREP KK+RIWLG++  PEMAA A+DVAAL ++GT A LNFPE
Sbjct: 49  PVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFPE 108

Query: 63  LAHSFPRPPTSTPEDIQTTAQMAA 87
           LA SFPRP + +P DIQT A  AA
Sbjct: 109 LADSFPRPVSLSPRDIQTAALKAA 132

[Close]

BLAST of Sed0026632.1 vs. TAIR 10
Match: AT1G01250.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 2.2e-27
Identity = 57/84 (67.86%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 3   PSYRGVRKRKWGKWVSEIREPGKKTRIWLGSYDLPEMAAAAYDVAALFLRGTDARLNFPE 62
           P Y GVRKR+WGKWVSEIREP KK+RIWLGS+ +PEMAA AYDVAA  L+G  A+LNFPE
Sbjct: 43  PVYHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPE 102

Query: 63  LAHSFPRPPTSTPEDIQTTAQMAA 87
                PRP T TP DIQ  A  AA
Sbjct: 103 EIEDLPRPSTCTPRDIQVAAAKAA 126

[Close]

BLAST of Sed0026632.1 vs. TAIR 10
Match: AT2G44940.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 2.2e-27
Identity = 58/100 (58.00%), Postives = 76/100 (76.00%), Query Frame = 0


Query: 3   PSYRGVRKRKWGKWVSEIREPGKKTRIWLGSYDLPEMAAAAYDVAALFLRGTDARLNFPE 62
           P+YRGVR R WGKWVSEIREP KK+RIWLG+Y   EMAA A+DVAAL ++GT A LNFP+
Sbjct: 98  PTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPK 157

Query: 63  LAHSFPRPPTSTPEDIQTTAQMAALQMRNHNNNNNTNKPA 103
           LA   PRP T++P+DIQ  A +AA+  ++  N+ + ++ A
Sbjct: 158 LAGELPRPVTNSPKDIQAAASLAAVNWQDSVNDVSNSEVA 197

The following BLAST results are available for this feature:

BLAST of Sed0026632.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890934.1	9.4e-57	72.78	ethylene-responsive transcription factor ERF022 [Benincasa hispida]	[more]
XP_008459595.1	3.6e-56	68.75	PREDICTED: ethylene-responsive transcription factor ERF022-like [Cucumis melo]	[more]
KAG7037163.1	6.1e-56	72.67	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
KAG6607516.1	6.1e-56	72.67	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_022973437.1	1.0e-55	72.94	ethylene-responsive transcription factor ERF022-like [Cucurbita maxima]	[more]

BLAST of Sed0026632.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQ28	5.4e-39	57.06	Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9C9I2	4.9e-32	56.06	Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LYD3	8.0e-27	70.24	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q1ECI2	3.0e-26	67.86	Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8LBQ7	3.0e-26	58.00	Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Sed0026632.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CAN7	1.7e-56	68.75	ethylene-responsive transcription factor ERF022-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1I7I6	5.0e-56	72.94	ethylene-responsive transcription factor ERF022-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1GCA4	1.1e-55	72.09	ethylene-responsive transcription factor ERF022-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1EBQ6	1.5e-55	69.19	ethylene-responsive transcription factor ERF022-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1IA08	2.1e-54	68.60	ethylene-responsive transcription factor ERF022-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of Sed0026632.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G33760.1	3.8e-40	57.06	Integrase-type DNA-binding superfamily protein	[more]
AT1G71450.1	3.4e-33	56.06	Integrase-type DNA-binding superfamily protein	[more]
AT5G11590.1	5.7e-28	70.24	Integrase-type DNA-binding superfamily protein	[more]
AT1G01250.1	2.2e-27	67.86	Integrase-type DNA-binding superfamily protein	[more]
AT2G44940.1	2.2e-27	58.00	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 43..63 score: 56.97 coord: 5..16 score: 70.91
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 4..67 e-value: 9.5E-36 score: 134.8
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 3..53 e-value: 7.8E-15 score: 54.9
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 4..61 score: 22.734432
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 3..63 e-value: 7.44121E-23 score: 84.2455
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 4..62 e-value: 6.4E-25 score: 89.1
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 4..167
None	No IPR available	PANTHER	PTHR31985:SF100	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF022	coord: 4..167
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 4..62

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0026632	Sed0026632	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0026632.1-five_prime_utr	Sed0026632.1-five_prime_utr-LG10:32751299..32751435	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0026632.1-exon	Sed0026632.1-exon-LG10:32751299..32752091	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0026632.1-cds	Sed0026632.1-cds-LG10:32751436..32751951	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0026632.1-three_prime_utr	Sed0026632.1-three_prime_utr-LG10:32751952..32752091	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0026632.1	Sed0026632.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity