
Sed0026007.1 (mRNA) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCAAAACTCCTAGCTTTTGAACAGACTGAGATATCGAAAAAAATGGGAACGGGGTGGTCGGAAGAGCAGGCGGCGCAAGTGCAGCAGCCAGGTAGCAGCAACGTCACCGCTACGAGAAGCGACGAGCGCAACATTGAAGAAAAGAAGAAGGGAGCAGAAGTGAAGCAGCTTGCACATGGCTTTGAAGCTATTTTGAAAGATGCAGATTTGGCAATGGATAGGTCCTCAGTTGATAAGGATCAGCTCTATGCTGGGATTTTTTTGAACAAACGAACCAAGGTAAGTGTGAAACAATTTATTTTATTTTATTTTATTTTCTCTTCTAAGTGTTTATATTATATAAAGGAATTCCAACTTACTCGAAGAAATTGTTACTATTTTGACAATTAAATAAGAAAAATAATTACAAATATAGGTAAATTTTAAAATATTTGCATCATAATCATTAATACATTTTAATACTGTTAATATAGTATTATATATTTTTAATACAATTAATACTCATGATTATCATTTCAAAAAAAAATTCATGATTATGGTTATTAAATTATTTTTAAAATGACTATATTTGTAATTATTTTTTTAAATTTAACTAATCGAGTAAGTTTCTCTTTAAATAATATTCCAAAAGGTAAAGAAAGTGATTGTAATGATTTTTTATTGTGTAACAAATGTGATTACTTCAATCATATAAAACTATGAAAAGACCACGTCTCAATGGGAGATATCTTGAAGATGTAGAAATCACGGTTAAGAAAAGATATTAAAAATGATAGTTATTGCTTACACCAACAATGGTACACCTCTTTTATGGTTGAATCGTAGAAATTTTAAAGTTAAGCGTACTTAACTTAGAGTAATTCTAGGTTTAAAGATTTCAAGTAACCTATCCACTATTATTAATAAAGGGCCTAATATTTCCTCTCCAAATGACTCCTATGCTATTCCTCATAACTAACCCAACTAACTAGAGTTAACTAACTCTTTAAAGGGGACTCTATCAATATTTGAATGAAATATCAAAACATATTGAAAGGACTCGTGTTCGGCTGTAAAAATAGTTTGCAAGTAACGTATTTAGTTCGTAGAAACTTTTTAGAGCCAAAAGGGGTCGAATCTGAGTTTTTGAATCTCGGCCGTAAGACAATACTTTGTAATAAATTATGAAGGTATAGAAGAATCTTTAAATGGCTAATTAACTAGCAACAATAGTAAAGCTCTATTGATATTATATTTGTCCTTTAAAATTCATTAATTTATTGAGTTATGTAGATATAGAAATAAATATTTTGATGCATAACTTCACTTTTAATACTTGGATGCAGAAATATTGGTTAGATAAGAAGACAAATAGTAACTGTTTCATGTTATTTCCAAGAGCTCTCTTAATAGTTTGGTCTGAAGAGAACAAGTACTGGAAATGGAAATCCCTCGAAGAGTCAAGGTATAATCTTAAAACTGGCAACTTTTAAACATATTCTACAATGATATCACATATCAAATTGTTATTATATTAAAATAATATTTATGCATAGGTTTGAATTAACTTAATCTTTTTTCAAGTTTAGTCCTAACAAAAATTAAGAGGTTGTGTATCAAAAGATGTGGGGAAAAAGTTCATTTCTTGATCTTTCTTCACCATGATGTCTAACAACTTGCAGCAACACAGTGGAGATCATTGAGCTTTTGAATGTATGTTGGCTCGAGATCAATGGGAAGATAAAGACGTCTGAGCTATCGCCAGGAACTCGGTACGAAGCAGCCTTTGTAGTAATGATCAAAGATCCAGCCTATGGATGGGAAGTTCCTGTGAACATCAGACTAAAAAAGCCAGATGGGAGCAAGCACGAGCATAAAGAGAATTTGTTGGAGAGGCCACGAGGGCGGTGGATCGAGATCCCGGCAGGCGATTTCATGGTACGTGATTGTGAGAATGGTGGCGAGGTCGAGATGAGCATGTATGAACACGATGGAGGAATGTGGAAGAAGGGAATGATTGTCAAAGGTGTTGTAATTCGACCAAAGGGATCAGCTTGA ATGCCAAAACTCCTAGCTTTTGAACAGACTGAGATATCGAAAAAAATGGGAACGGGGTGGTCGGAAGAGCAGGCGGCGCAAGTGCAGCAGCCAGGTAGCAGCAACGTCACCGCTACGAGAAGCGACGAGCGCAACATTGAAGAAAAGAAGAAGGGAGCAGAAGTGAAGCAGCTTGCACATGGCTTTGAAGCTATTTTGAAAGATGCAGATTTGGCAATGGATAGGTCCTCAGTTGATAAGGATCAGCTCTATGCTGGGATTTTTTTGAACAAACGAACCAAGAAATATTGGTTAGATAAGAAGACAAATAGTAACTGTTTCATGTTATTTCCAAGAGCTCTCTTAATAGTTTGGTCTGAAGAGAACAAGTACTGGAAATGGAAATCCCTCGAAGAGTCAAGCAACACAGTGGAGATCATTGAGCTTTTGAATGTATGTTGGCTCGAGATCAATGGGAAGATAAAGACGTCTGAGCTATCGCCAGGAACTCGGTACGAAGCAGCCTTTGTAGTAATGATCAAAGATCCAGCCTATGGATGGGAAGTTCCTGTGAACATCAGACTAAAAAAGCCAGATGGGAGCAAGCACGAGCATAAAGAGAATTTGTTGGAGAGGCCACGAGGGCGGTGGATCGAGATCCCGGCAGGCGATTTCATGGTACGTGATTGTGAGAATGGTGGCGAGGTCGAGATGAGCATGTATGAACACGATGGAGGAATGTGGAAGAAGGGAATGATTGTCAAAGGTGTTGTAATTCGACCAAAGGGATCAGCTTGA ATGCCAAAACTCCTAGCTTTTGAACAGACTGAGATATCGAAAAAAATGGGAACGGGGTGGTCGGAAGAGCAGGCGGCGCAAGTGCAGCAGCCAGGTAGCAGCAACGTCACCGCTACGAGAAGCGACGAGCGCAACATTGAAGAAAAGAAGAAGGGAGCAGAAGTGAAGCAGCTTGCACATGGCTTTGAAGCTATTTTGAAAGATGCAGATTTGGCAATGGATAGGTCCTCAGTTGATAAGGATCAGCTCTATGCTGGGATTTTTTTGAACAAACGAACCAAGAAATATTGGTTAGATAAGAAGACAAATAGTAACTGTTTCATGTTATTTCCAAGAGCTCTCTTAATAGTTTGGTCTGAAGAGAACAAGTACTGGAAATGGAAATCCCTCGAAGAGTCAAGCAACACAGTGGAGATCATTGAGCTTTTGAATGTATGTTGGCTCGAGATCAATGGGAAGATAAAGACGTCTGAGCTATCGCCAGGAACTCGGTACGAAGCAGCCTTTGTAGTAATGATCAAAGATCCAGCCTATGGATGGGAAGTTCCTGTGAACATCAGACTAAAAAAGCCAGATGGGAGCAAGCACGAGCATAAAGAGAATTTGTTGGAGAGGCCACGAGGGCGGTGGATCGAGATCCCGGCAGGCGATTTCATGGTACGTGATTGTGAGAATGGTGGCGAGGTCGAGATGAGCATGTATGAACACGATGGAGGAATGTGGAAGAAGGGAATGATTGTCAAAGGTGTTGTAATTCGACCAAAGGGATCAGCTTGA MPKLLAFEQTEISKKMGTGWSEEQAAQVQQPGSSNVTATRSDERNIEEKKKGAEVKQLAHGFEAILKDADLAMDRSSVDKDQLYAGIFLNKRTKKYWLDKKTNSNCFMLFPRALLIVWSEENKYWKWKSLEESSNTVEIIELLNVCWLEINGKIKTSELSPGTRYEAAFVVMIKDPAYGWEVPVNIRLKKPDGSKHEHKENLLERPRGRWIEIPAGDFMVRDCENGGEVEMSMYEHDGGMWKKGMIVKGVVIRPKGSA Homology
BLAST of Sed0026007.1 vs. NCBI nr
Match: XP_022142433.1 (lectin-like [Momordica charantia]) HSP 1 Score: 366.3 bits (939), Expect = 2.2e-97 Identity = 176/244 (72.13%), Postives = 203/244 (83.20%), Query Frame = 0
BLAST of Sed0026007.1 vs. NCBI nr
Match: XP_038895126.1 (lectin-like [Benincasa hispida]) HSP 1 Score: 355.5 bits (911), Expect = 3.8e-94 Identity = 178/259 (68.73%), Postives = 208/259 (80.31%), Query Frame = 0
BLAST of Sed0026007.1 vs. NCBI nr
Match: XP_008465530.1 (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A1-like [Cucumis melo]) HSP 1 Score: 347.8 bits (891), Expect = 7.9e-92 Identity = 168/259 (64.86%), Postives = 206/259 (79.54%), Query Frame = 0
BLAST of Sed0026007.1 vs. NCBI nr
Match: XP_004145449.1 (lectin [Cucumis sativus] >KGN66883.1 hypothetical protein Csa_006927 [Cucumis sativus]) HSP 1 Score: 344.4 bits (882), Expect = 8.8e-91 Identity = 168/258 (65.12%), Postives = 203/258 (78.68%), Query Frame = 0
BLAST of Sed0026007.1 vs. NCBI nr
Match: XP_023001597.1 (lectin-like [Cucurbita maxima]) HSP 1 Score: 334.7 bits (857), Expect = 6.9e-88 Identity = 165/246 (67.07%), Postives = 198/246 (80.49%), Query Frame = 0
BLAST of Sed0026007.1 vs. ExPASy Swiss-Prot
Match: C0HJV2 (Lectin OS=Luffa acutangula OX=56866 PE=1 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 2.3e-54 Identity = 105/209 (50.24%), Postives = 139/209 (66.51%), Query Frame = 0
BLAST of Sed0026007.1 vs. ExPASy Swiss-Prot
Match: O81865 (Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana OX=3702 GN=PP2A1 PE=2 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 3.0e-49 Identity = 102/210 (48.57%), Postives = 139/210 (66.19%), Query Frame = 0
BLAST of Sed0026007.1 vs. ExPASy Swiss-Prot
Match: Q9C8U9 (Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 OS=Arabidopsis thaliana OX=3702 GN=PP2A4 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 1.8e-30 Identity = 67/153 (43.79%), Postives = 91/153 (59.48%), Query Frame = 0
BLAST of Sed0026007.1 vs. ExPASy Swiss-Prot
Match: Q9C5Q9 (Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana OX=3702 GN=PP2A5 PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.1e-26 Identity = 61/167 (36.53%), Postives = 94/167 (56.29%), Query Frame = 0
BLAST of Sed0026007.1 vs. ExPASy Swiss-Prot
Match: O81866 (Protein PHLOEM PROTEIN 2-LIKE A2 OS=Arabidopsis thaliana OX=3702 GN=PP2A2 PE=2 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 3.9e-25 Identity = 53/118 (44.92%), Postives = 73/118 (61.86%), Query Frame = 0
BLAST of Sed0026007.1 vs. ExPASy TrEMBL
Match: A0A6J1CN87 (lectin-like OS=Momordica charantia OX=3673 GN=LOC111012568 PE=4 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 1.0e-97 Identity = 176/244 (72.13%), Postives = 203/244 (83.20%), Query Frame = 0
BLAST of Sed0026007.1 vs. ExPASy TrEMBL
Match: A0A1S3CQJ8 (protein PHLOEM PROTEIN 2-LIKE A1-like OS=Cucumis melo OX=3656 GN=LOC103503156 PE=4 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 3.8e-92 Identity = 168/259 (64.86%), Postives = 206/259 (79.54%), Query Frame = 0
BLAST of Sed0026007.1 vs. ExPASy TrEMBL
Match: A0A0A0LYN2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G703070 PE=4 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 4.2e-91 Identity = 168/258 (65.12%), Postives = 203/258 (78.68%), Query Frame = 0
BLAST of Sed0026007.1 vs. ExPASy TrEMBL
Match: A0A6J1KH05 (lectin-like OS=Cucurbita maxima OX=3661 GN=LOC111495677 PE=4 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 3.4e-88 Identity = 165/246 (67.07%), Postives = 198/246 (80.49%), Query Frame = 0
BLAST of Sed0026007.1 vs. ExPASy TrEMBL
Match: A0A6J1EK84 (lectin-like OS=Cucurbita moschata OX=3662 GN=LOC111434092 PE=4 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 4.5e-85 Identity = 161/246 (65.45%), Postives = 192/246 (78.05%), Query Frame = 0
BLAST of Sed0026007.1 vs. TAIR 10
Match: AT4G19840.1 (phloem protein 2-A1 ) HSP 1 Score: 196.8 bits (499), Expect = 2.1e-50 Identity = 102/210 (48.57%), Postives = 139/210 (66.19%), Query Frame = 0
BLAST of Sed0026007.1 vs. TAIR 10
Match: AT1G33920.1 (phloem protein 2-A4 ) HSP 1 Score: 134.4 bits (337), Expect = 1.3e-31 Identity = 67/153 (43.79%), Postives = 91/153 (59.48%), Query Frame = 0
BLAST of Sed0026007.1 vs. TAIR 10
Match: AT4G19850.2 (lectin-related ) HSP 1 Score: 129.8 bits (325), Expect = 3.2e-30 Identity = 68/177 (38.42%), Postives = 102/177 (57.63%), Query Frame = 0
BLAST of Sed0026007.1 vs. TAIR 10
Match: AT1G65390.1 (phloem protein 2 A5 ) HSP 1 Score: 120.9 bits (302), Expect = 1.5e-27 Identity = 61/167 (36.53%), Postives = 94/167 (56.29%), Query Frame = 0
BLAST of Sed0026007.1 vs. TAIR 10
Match: AT4G19850.1 (lectin-related ) HSP 1 Score: 116.7 bits (291), Expect = 2.8e-26 Identity = 53/118 (44.92%), Postives = 73/118 (61.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|