Sed0022520.2 (mRNA) Chayote v1

Overview


Name	Sed0022520.2
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	homeobox-leucine zipper protein HOX11-like
Location	LG12: 9306669 .. 9309031 (+)
Sequence length	1273
RNA-Seq Expression	Sed0022520.2
Synteny	Sed0022520.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAGTTGTTATCTTTTATTTCACAAAAGCTTTGTTCTTTTTGGCTATGGAGTTGGCTTTGAGGCTTGGCGATTATTCTCCCAATTCCGATAAGCCATTTGGGCTTCTCTCTAAACCTTCTTCTTCTTCCTCCCTCATGGCTTTGGGGTTCTGTGTTGCTTCTCGTTCGCCTTCTCGTTCGATTCATGACGACGATGATGACGATGATGATGATGATGATGAAGAGAAAATGATCGCTCGTGGTTCGGTATCCGGTTTGGATCCTCCCGTTCAGCTTGATCTTCTTCCTTTGGCTCCTGTTCCTCGTTCTTCCCATCAATCTTCTTCTCACCTCACATTTCCTTGGCTTTCTGATCGCTGTAAATATACTACCCTCTTCTTCATTTTATACTTTTTTTCTTTTTCTTTTTTGGATTAATATTTGTGATTACTTGTTTAGTCATGTTAAATCACTGTCTAACCAAAAATTTAAGCGGGTGGATTGTGATACATTTAATTATATCAATTACTACGCTCCCATGCTGGTTTGAAAATTTGAAAAATATCCATCGAGTAAAAATTAATATTTATAGAGAAGAAAATGATTTTATCGAAATTCGAATACAGAACCTTCTGTTACCTCAATCCACAACTTAATTAGTGATTTAACATAGATTCAAGAAAGCTTATTTGATGGGTTGTATTAAAGTTTAAGTTTTTAGCAATTAAAAAATGAGAGCTTTTGAAATTGTGGATTTTTCAATTATGGAATGATTGAACATGATTCAACCAACACTATTTGATGGGTTTTTGTTAAAGTTGAAATTTTTAGGGGTTCAAAAAACATTAGAGCTTTGGAAATTGAGGGGTTTTCGATTATGGAATGATTTAGGGGCATAATTTGAGATAAATCTTTGGTGTTTGTAGTGATGCCGGAACTGGGTTGTTCGGAGGGAGCTGAAAAAGGGTTGGATGTGAACCGGCTTCCGGCCGCGGGAGCGTTGTCGTCTCCGAACGGTAATACGGTGTCGAGTTTTCAGATGGATTTTGTGGTGAGAAATGGAGGATCAGGATCAAGATGCATTAAGAGATCTCCTGAAATGGAAATGGAGACTGAAAGAGCTTCGTCCAGAATGAGTGATGATGAAGAAAATATTGGCTCTGCTCGAAAAAAGCTTAGACTTTCTAAACAACAATCGGCTTTTCTTGAAGAAAGCTTTAAAGAACACAGCACCCTCAATCCTGTATGTCAAAACCCTCCATTTACCCAATCTTTCCCATTTATGTTTTTTTTTTTTTCTATTCTTTTATATATATTTGAGTGTCAGAATGAAAAGAGTTTGCTGACATGTTGGTTTGGTTGATTTATCGTAATTCAATTCAACTCTACGGTTATAAATTTAATTTTGAAAATCGATATTTAACTCTCTAACTTATTTGAAAGGGTATAACCTCTAAGTAGGGATATTCTATTATCGTCGAGAAAATCATTTGAAAGTTCAACTATTAAATTGAATCTATAACTTCTCCTATTGTTCAATGCTCTCTTAAAATGTGTATCATCATCATCTTAAAACTAAAATTAATTAGTGACAACGTAACTTATACATGTTGTAAGATCTGTCAATTTTTTCTATTTGAGTTCTTAAATATATTCTTCCAAGAATAGCATCTCTTTTGATTCTGTTTAACATTCATAAATTATAAATTCTGATATATCATATATGATTTGGTTTAAAAAATAATTGTAGAATAATAAGAATAATAGTTTCATTTTGAACTGGCAGAAGCAGAAACTAGCACTAGCCAAGCAGCTAAACCTCAGGCCTAGGCAAGTAGAAGTTTGGTTTCAAAACAGAAGAGCAAGGTACTTCACAAAAAATTTTAATTTTTTTTTTTAATGAAATGATTTAAAACCCTGTCGGAAAAAGATCATTAATAACACCAAAAATTGTGTGTGCATTGAATATTTTAGGACAAAGTTGAAACAGACAGAAGTAGATTGTGAGTATTTAAGGAGATGCTGTGAGACATTGACAGAAGAGAACAGAAGATTACAAAAGGAACTTCAAGAATTAAGAGCCTTAAAAACTTCTCAGCCTTTTTATATGCAACTCCCAGCCACCACCCTCACTATGTGCCCCTCTTGCGAGCGCGTCTCCTCCACCGCTCCCACCGTCACGGTCCCCACCCCGAACCCAACTGCTCTTTGCCTCGCGAACAAGCCGAGAATCTTGCCATTTCCTCACCTGCACCAGGCTGCTTCATGAGCATGGACATGAATACACACAAAAGGTTATCTTGTTTTAAAAGAAGACAAAGAAAGTCGTATGAGATTTTTGTACATATTTTTCTTTTTTGGGGTTGGAGCAATGTTTTTGTTC

mRNA sequence

CAAAGTTGTTATCTTTTATTTCACAAAAGCTTTGTTCTTTTTGGCTATGGAGTTGGCTTTGAGGCTTGGCGATTATTCTCCCAATTCCGATAAGCCATTTGGGCTTCTCTCTAAACCTTCTTCTTCTTCCTCCCTCATGGCTTTGGGGTTCTGTGTTGCTTCTCGTTCGCCTTCTCGTTCGATTCATGACGACGATGATGACGATGATGATGATGATGATGAAGAGAAAATGATCGCTCGTGGTTCGGTATCCGGTTTGGATCCTCCCGTTCAGCTTGATCTTCTTCCTTTGGCTCCTGTTCCTCGTTCTTCCCATCAATCTTCTTCTCACCTCACATTTCCTTGGCTTTCTGATCGCTTGATGCCGGAACTGGGTTGTTCGGAGGGAGCTGAAAAAGGGTTGGATGTGAACCGGCTTCCGGCCGCGGGAGCGTTGTCGTCTCCGAACGGTAATACGGTGTCGAGTTTTCAGATGGATTTTGTGGTGAGAAATGGAGGATCAGGATCAAGATGCATTAAGAGATCTCCTGAAATGGAAATGGAGACTGAAAGAGCTTCGTCCAGAATGAGTGATGATGAAGAAAATATTGGCTCTGCTCGAAAAAAGCTTAGACTTTCTAAACAACAATCGGCTTTTCTTGAAGAAAGCTTTAAAGAACACAGCACCCTCAATCCTAAGCAGAAACTAGCACTAGCCAAGCAGCTAAACCTCAGGCCTAGGCAAGTAGAAGTTTGGTTTCAAAACAGAAGAGCAAGGTACTTCACAAAAAATTTTAATTTTTTTTTTTAATGAAATGATTTAAAACCCTGTCGGAAAAAGATCATTAATAACACCAAAAATTGTGTGTGCATTGAATATTTTAGGACAAAGTTGAAACAGACAGAAGTAGATTGTGAGTATTTAAGGAGATGCTGTGAGACATTGACAGAAGAGAACAGAAGATTACAAAAGGAACTTCAAGAATTAAGAGCCTTAAAAACTTCTCAGCCTTTTTATATGCAACTCCCAGCCACCACCCTCACTATGTGCCCCTCTTGCGAGCGCGTCTCCTCCACCGCTCCCACCGTCACGGTCCCCACCCCGAACCCAACTGCTCTTTGCCTCGCGAACAAGCCGAGAATCTTGCCATTTCCTCACCTGCACCAGGCTGCTTCATGAGCATGGACATGAATACACACAAAAGGTTATCTTGTTTTAAAAGAAGACAAAGAAAGTCGTATGAGATTTTTGTACATATTTTTCTTTTTTGGGGTTGGAGCAATGTTTTTGTTC

Coding sequence (CDS)

ATGGAGTTGGCTTTGAGGCTTGGCGATTATTCTCCCAATTCCGATAAGCCATTTGGGCTTCTCTCTAAACCTTCTTCTTCTTCCTCCCTCATGGCTTTGGGGTTCTGTGTTGCTTCTCGTTCGCCTTCTCGTTCGATTCATGACGACGATGATGACGATGATGATGATGATGATGAAGAGAAAATGATCGCTCGTGGTTCGGTATCCGGTTTGGATCCTCCCGTTCAGCTTGATCTTCTTCCTTTGGCTCCTGTTCCTCGTTCTTCCCATCAATCTTCTTCTCACCTCACATTTCCTTGGCTTTCTGATCGCTTGATGCCGGAACTGGGTTGTTCGGAGGGAGCTGAAAAAGGGTTGGATGTGAACCGGCTTCCGGCCGCGGGAGCGTTGTCGTCTCCGAACGGTAATACGGTGTCGAGTTTTCAGATGGATTTTGTGGTGAGAAATGGAGGATCAGGATCAAGATGCATTAAGAGATCTCCTGAAATGGAAATGGAGACTGAAAGAGCTTCGTCCAGAATGAGTGATGATGAAGAAAATATTGGCTCTGCTCGAAAAAAGCTTAGACTTTCTAAACAACAATCGGCTTTTCTTGAAGAAAGCTTTAAAGAACACAGCACCCTCAATCCTAAGCAGAAACTAGCACTAGCCAAGCAGCTAAACCTCAGGCCTAGGCAAGTAGAAGTTTGGTTTCAAAACAGAAGAGCAAGGTACTTCACAAAAAATTTTAATTTTTTTTTTTAA

Protein sequence

MELALRLGDYSPNSDKPFGLLSKPSSSSSLMALGFCVASRSPSRSIHDDDDDDDDDDDEEKMIARGSVSGLDPPVQLDLLPLAPVPRSSHQSSSHLTFPWLSDRLMPELGCSEGAEKGLDVNRLPAAGALSSPNGNTVSSFQMDFVVRNGGSGSRCIKRSPEMEMETERASSRMSDDEENIGSARKKLRLSKQQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARYFTKNFNFFF

Homology

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BLAST of Sed0022520.2 vs. NCBI nr
Match: XP_022151365.1 (homeobox-leucine zipper protein HOX11 isoform X1 [Momordica charantia])

HSP 1 Score: 294.7 bits (753), Expect = 7.6e-76
Identity = 184/281 (65.48%), Postives = 200/281 (71.17%), Query Frame = 0


Query: 1   MELALRLGDYSPNSDKPFGLLSKP------SSSSSLMALGFCV------------ASRSP 60
           MELAL LGD   N++KPFG LSKP      SS+S  MALGFCV             S S 
Sbjct: 1   MELALSLGDTPTNNNKPFGFLSKPSKLSSSSSASPFMALGFCVGLARDSASASASGSGSG 60

Query: 61  SRSIHDD--------DDD---DDDDDDEEKMIARGSVSGLDPPVQLDLLPLAPVPRSSHQ 120
           S SIHDD        DDD   D++DDD+E++I  GS SG DPPVQLDLLP APVPRS H 
Sbjct: 61  SASIHDDQGREVREEDDDEEEDEEDDDDERIILPGSGSGSDPPVQLDLLPPAPVPRSHHS 120

Query: 121 SSSHLTFPWLSDRLMPELGCSE-GAEKGLDVNRLPAAG--------------ALSSPNGN 180
           SSSHL FPWLSD LM E GCS+ GAE+ LDVNRLPA G               +SSPN +
Sbjct: 121 SSSHLPFPWLSDHLMAERGCSDGGAERVLDVNRLPAVGPAEETDDRAAAAAAGMSSPN-S 180

Query: 181 TVSSFQMDFVVRNGGSGSRCIKRSPEMEMETERASSRMSDDEENIGSARKKLRLSKQQSA 238
            VSSFQMDF VRNGG      KRS + EMETERASSR+SDD+EN GSARKKLRLSK+QSA
Sbjct: 181 AVSSFQMDFGVRNGGGS----KRSSDFEMETERASSRISDDDEN-GSARKKLRLSKEQSA 240

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BLAST of Sed0022520.2 vs. NCBI nr
Match: XP_022151367.1 (homeobox-leucine zipper protein HOX11 isoform X2 [Momordica charantia])

HSP 1 Score: 278.9 bits (712), Expect = 4.3e-71
Identity = 178/280 (63.57%), Postives = 193/280 (68.93%), Query Frame = 0


Query: 1   MELALRLGDYSPNSDKPFGLLSKP------SSSSSLMALGFCV------------ASRSP 60
           MELAL LGD   N++KPFG LSKP      SS+S  MALGFCV             S S 
Sbjct: 1   MELALSLGDTPTNNNKPFGFLSKPSKLSSSSSASPFMALGFCVGLARDSASASASGSGSG 60

Query: 61  SRSIHDD--------DDD---DDDDDDEEKMIARGSVSGLDPPVQLDLLPLAPVPRSSHQ 120
           S SIHDD        DDD   D++DDD+E++I  GS SG DPPVQLDLLP APVPRS H 
Sbjct: 61  SASIHDDQGREVREEDDDEEEDEEDDDDERIILPGSGSGSDPPVQLDLLPPAPVPRSHHS 120

Query: 121 SSSHLTFPWLSDRLMPELGCSEGAEKGLDVNRLPAAG--------------ALSSPNGNT 180
           SSSHL FPWLSD          GAE+ LDVNRLPA G               +SSPN + 
Sbjct: 121 SSSHLPFPWLSDHY-------GGAERVLDVNRLPAVGPAEETDDRAAAAAAGMSSPN-SA 180

Query: 181 VSSFQMDFVVRNGGSGSRCIKRSPEMEMETERASSRMSDDEENIGSARKKLRLSKQQSAF 238
           VSSFQMDF VRNGG      KRS + EMETERASSR+SDD+EN GSARKKLRLSK+QSAF
Sbjct: 181 VSSFQMDFGVRNGGGS----KRSSDFEMETERASSRISDDDEN-GSARKKLRLSKEQSAF 240

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BLAST of Sed0022520.2 vs. NCBI nr
Match: XP_023539558.1 (homeobox-leucine zipper protein HOX11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274.2 bits (700), Expect = 1.1e-69
Identity = 174/261 (66.67%), Postives = 191/261 (73.18%), Query Frame = 0


Query: 1   MELALRLGDYSPNSDKPFGLLSKPSSSSSLMALGFCV------------ASRSPSRSIHD 60
           MEL LRLGD +PNS+ PFG+ S PSSSSSLMALGFCV             S S    +HD
Sbjct: 1   MELGLRLGD-APNSNNPFGVRSIPSSSSSLMALGFCVGLGHGYGYGSGSGSGSGFGRVHD 60

Query: 61  DDDDDDDDDDEEKMIARGSVSGLDPPVQLDLLPLAPVPRSSHQSSSHLTFPWLSDRLMPE 120
           +D  D  DDDE+ +   GS  GLDPPVQLDLLPLAPVPRSSHQSSS L F  LS RLMPE
Sbjct: 61  EDGRDVKDDDEKTI--PGSGYGLDPPVQLDLLPLAPVPRSSHQSSSTLPFSCLSHRLMPE 120

Query: 121 LGCSEGAEKGLDVNRLPAAGAL-----------SSPNGNTVSSFQMDFVVRNGGSGSRC- 180
           LGC+   +K LDVNR PA  A             SPN +TV+SFQMDF VRNGG   R  
Sbjct: 121 LGCT---DKVLDVNRPPALAAAVEMIPVEETEDKSPN-STVTSFQMDFGVRNGGGRGRTR 180

Query: 181 IKRSPEMEMETERASSRMSDDEENIGSARKKLRLSKQQSAFLEESFKEHSTLNPKQKLAL 238
            KRS +MEMETER+SSR+SDDEEN  SARKKLRLSK+QSAFLE+SFK+HSTLNPKQK AL
Sbjct: 181 SKRSSDMEMETERSSSRISDDEEN-ASARKKLRLSKEQSAFLEQSFKQHSTLNPKQKAAL 240

[Close]

BLAST of Sed0022520.2 vs. NCBI nr
Match: XP_038905251.1 (homeobox-leucine zipper protein HOX11-like [Benincasa hispida])

HSP 1 Score: 270.8 bits (691), Expect = 1.2e-68
Identity = 179/269 (66.54%), Postives = 197/269 (73.23%), Query Frame = 0


Query: 1   MELALRLGDYSP-NSDKPFGLLSKP---SSSSSLMALGFCV-------ASRSPSRSIHD- 60
           MEL L LGD+ P NS+KPFG LSKP   SSSSSLMALGFCV        S S S S+HD 
Sbjct: 1   MELGLSLGDHPPSNSNKPFGFLSKPLSSSSSSSLMALGFCVGLIGHHSTSASASASVHDD 60

Query: 61  --DDDDDDDDDDEEKMIARGSVSGLDPPVQLDLLPLAPVPRSSHQSSSHLTFPWLSDRLM 120
             D+D+D+DDD+++K +  GS SGLDPPVQLDLLPLAPVPRS   SSS L FPWLS  LM
Sbjct: 61  EEDEDEDEDDDNDQKTVLPGSTSGLDPPVQLDLLPLAPVPRS---SSSSLPFPWLSHHLM 120

Query: 121 PELGCSEGAEK-GLDVNRLPAA----------GALSSPNGNTVSSFQMDFVVRNGGSGSR 180
            E+  SE  E+  LDVNR+ AA           ALSSPN +TVS FQM+F VRNGG   R
Sbjct: 121 AEVESSERGERVELDVNRVAAAAAEETEDKAVAALSSPN-STVSCFQMEFGVRNGGGIRR 180

Query: 181 CIKRSPEMEME-TERAS-SRMSDDEENIGS-----ARKKLRLSKQQSAFLEESFKEHSTL 238
             KRS EMEME TER   SRMSDD++N  S     ARKKLRLSKQQSAFLEESFKEH+TL
Sbjct: 181 --KRSWEMEMEITERGGCSRMSDDDDNNASAAAAAARKKLRLSKQQSAFLEESFKEHTTL 240

[Close]

BLAST of Sed0022520.2 vs. NCBI nr
Match: KAG6596243.1 (Homeobox-leucine zipper protein HAT14, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 267.3 bits (682), Expect = 1.3e-67
Identity = 175/262 (66.79%), Postives = 193/262 (73.66%), Query Frame = 0


Query: 1   MELALRLGDYSPNSDKPFGLLSKPSSSSSLMALGFCV----------ASRSPSRSIHDDD 60
           MEL LRLGD +PNS+ PFG+ S P SSSSLMALGFCV           S S S  + D+D
Sbjct: 1   MELGLRLGD-APNSNNPFGVRSIP-SSSSLMALGFCVGLGRGSGSGSGSGSGSGLVRDED 60

Query: 61  D---DDDDDDDEEKMIARGSVSGLDPPVQLDLLPLAPVPRSSHQSSSHLTFPWLSDRLMP 120
                D+D+DD+EK I  GS  GLDPPVQLDLLPLAPVPRSSHQSSS L F  LS RLMP
Sbjct: 61  GRDVKDEDEDDDEKAIP-GSGYGLDPPVQLDLLPLAPVPRSSHQSSSPLPFSCLSHRLMP 120

Query: 121 ELGCSEGAEKGLDVNRLP--AAGAL---------SSPNGNTVSSFQMDFVVRNGGSGSRC 180
           ELGC+   +K LDVNR P  AAG            SPN + V+SFQMDF VRNGG   R 
Sbjct: 121 ELGCT---DKVLDVNRPPELAAGVAMVPAEETEDKSPN-SAVTSFQMDFGVRNGGGRGRT 180

Query: 181 -IKRSPEMEMETERASSRMSDDEENIGSARKKLRLSKQQSAFLEESFKEHSTLNPKQKLA 238
             KRS +MEMETER+SSR+SDDEEN  SARKKLRLSK+QSAFLE+SFK+HSTLNPKQK A
Sbjct: 181 RSKRSSDMEMETERSSSRISDDEEN-ASARKKLRLSKEQSAFLEQSFKQHSTLNPKQKAA 240

[Close]

BLAST of Sed0022520.2 vs. ExPASy Swiss-Prot
Match: P46665 (Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana OX=3702 GN=HAT14 PE=2 SV=3)

HSP 1 Score: 134.4 bits (337), Expect = 1.7e-30
Identity = 112/257 (43.58%), Postives = 145/257 (56.42%), Query Frame = 0


Query: 1   MELALRLGDYSPNSDKPFGLLSK---------PSSSSSLMALGFCVA---------SRSP 60
           MELAL LGD   N+ K F  + K          S+S+S   LGFC+A         S S 
Sbjct: 1   MELALSLGD---NTKKQFSFMEKNSKINNPSVSSTSTSEKDLGFCMALDVAFGGHRSLSS 60

Query: 61  SRSIHDDDDDDDDDDDEEKMIARGSVSGLDPPVQLDLLPLAPVPRSSHQSSSHLTFPWLS 120
           S S   +D+        +K       S +DPP+QL L     +P +S             
Sbjct: 61  SSSPSVEDEKKKPAPRAKKSDEFRVSSSVDPPLQLQLHFPNWLPENSKGRQG-------- 120

Query: 121 DRLMPELGCSEGAEKGLDVNRLPAAGALSSPNGNTVSSFQMDFVVRNGGSGSRCIKRSPE 180
              MP LG +   E+  +      + ++S P+  T SSFQ+DF +++ G   R  KR  +
Sbjct: 121 -GRMP-LGAATVVEEEEEEEEAVPSMSVSPPDSVT-SSFQLDFGIKSYGYERRSNKR--D 180

Query: 181 MEMETERASSRMS--DDEENIGSARKKLRLSKQQSAFLEESFKEHSTLNPKQKLALAKQL 238
           ++ E ER++SR S  D+++  GS RKKLRLSK QSAFLE+SFKEHSTLNPKQK+ALAKQL
Sbjct: 181 IDDEVERSASRASNEDNDDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQL 240

[Close]

BLAST of Sed0022520.2 vs. ExPASy Swiss-Prot
Match: A2Z1U1 (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica OX=39946 GN=HOX11 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.1e-28
Identity = 80/143 (55.94%), Postives = 91/143 (63.64%), Query Frame = 0


Query: 110 GCSEGAEKGLDVNRLPAAG---------------ALSSPNGNTVSSFQMDFVVRNGGSGS 169
           G  E + +G DVNR P++G               ALSS   N+  SF MD    +G  G+
Sbjct: 4   GHLEASTRGFDVNRPPSSGGGGGAEEEQDDVAGAALSSSPNNSAGSFPMDDFSGHGLGGN 63

Query: 170 RCIKRSPEMEMETERASSRMSDDEENIGSARKKLRLSKQQSAFLEESFKEHSTLNPKQKL 229
                    +    RAS     DE++ GSARKKLRLSK+QSAFLEESFKEHSTLNPKQKL
Sbjct: 64  DAAPGGGGGDRSCSRAS-----DEDDGGSARKKLRLSKEQSAFLEESFKEHSTLNPKQKL 123

Query: 230 ALAKQLNLRPRQVEVWFQNRRAR 238
           ALAKQLNLRPRQVEVWFQNRRAR
Sbjct: 124 ALAKQLNLRPRQVEVWFQNRRAR 141

[Close]

BLAST of Sed0022520.2 vs. ExPASy Swiss-Prot
Match: Q67UE2 (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX11 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 8.0e-28
Identity = 103/262 (39.31%), Postives = 128/262 (48.85%), Query Frame = 0


Query: 1   MELALRLGDYSPNSDKPFGLLSKPSSSSSLMALGFCVASRSPSRSIHDDDDDDDDDDDEE 60
           MEL L LG+   ++ +              + LG  +  R  +      D +   + +  
Sbjct: 1   MELGLSLGEAMADAGRE-------------LVLGLGMGRREEAAEAGRRDHEVRRELEFG 60

Query: 61  KMIARGSVSGLDPPVQLDLLPLA-------PVPRSSHQSSSHLTFPWLSDRLMPELGCSE 120
            M +R   S  +P V+L LLP+        P P      S HL                E
Sbjct: 61  SMSSRCGGSSPEPTVRLTLLPMVPGLGLPWPPPPPPSSESRHL----------------E 120

Query: 121 GAEKGLDVNRLPAAG------------------ALSSPNGNTVSSFQMDFVVRNGGSGSR 180
            + +G DVNR P++G                  ALSS   N+  SF MD    +G  G+ 
Sbjct: 121 ASTRGFDVNRPPSSGGGGGGGGAEEEQDDVAGAALSSSPNNSAGSFPMDDFSGHGLGGND 180

Query: 181 CIKRSPEMEMETERASSRMSDDEENIGSARKKLRLSKQQSAFLEESFKEHSTLNPKQKLA 238
                   +    RAS     DE++ GSARKKLRLSK+QSAFLEESFKEHSTLNPKQKLA
Sbjct: 181 AAPGGGGGDRSCSRAS-----DEDDGGSARKKLRLSKEQSAFLEESFKEHSTLNPKQKLA 228

[Close]

BLAST of Sed0022520.2 vs. ExPASy Swiss-Prot
Match: Q6YPD0 (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX27 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 8.0e-28
Identity = 94/197 (47.72%), Postives = 109/197 (55.33%), Query Frame = 0


Query: 58  DEEKMIARGSVSGLDPPVQLDLLPLAPVPRSSHQSSSHLTFPWLSDRLMPELGCSEGAEK 117
           +EE+   R  V G      +      P  R S  SS  L +P        E G SE A +
Sbjct: 37  EEEERGRREDVVGAGRWAAMAAASPEPSVRLSLVSSLGLHWP-------SETGRSEAAAR 96

Query: 118 GLDVNRLP-----------------AAGALSSPNGNTVSSFQMDFVVRNGGSGSRCIKRS 177
           G DVNR P                 AA ALSS   ++  SF +D   +     +    + 
Sbjct: 97  GFDVNRAPSVAAGAPGMEDDEEGPGAAPALSSSPNDSGGSFPLDLSGQGLRGHAEAAAQG 156

Query: 178 PEMEMETERASSRMSDDEENIGSARKKLRLSKQQSAFLEESFKEHSTLNPKQKLALAKQL 237
                  ER+SSR SDD+E   SARKKLRLSK+QSAFLEESFKEHSTLNPKQK+ALAKQL
Sbjct: 157 GGGGGGGERSSSRASDDDEG-ASARKKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQL 216

[Close]

BLAST of Sed0022520.2 vs. ExPASy Swiss-Prot
Match: A2YW03 (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica OX=39946 GN=HOX27 PE=2 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 1.0e-27
Identity = 94/197 (47.72%), Postives = 108/197 (54.82%), Query Frame = 0


Query: 58  DEEKMIARGSVSGLDPPVQLDLLPLAPVPRSSHQSSSHLTFPWLSDRLMPELGCSEGAEK 117
           +EE+   R  V G      +      P  R S  SS  L +P        E G SE A +
Sbjct: 37  EEEERGRREDVVGAGRWAAMAAASPEPSVRLSLVSSLGLHWP-------SETGRSEAAAR 96

Query: 118 GLDVNRLP-----------------AAGALSSPNGNTVSSFQMDFVVRNGGSGSRCIKRS 177
           G DVNR P                 AA ALSS   ++  SF +D         +    + 
Sbjct: 97  GFDVNRAPSVAAGAPGMEDDEEGPGAAPALSSSPNDSGGSFPLDLSGHGLRGHAEAAAQG 156

Query: 178 PEMEMETERASSRMSDDEENIGSARKKLRLSKQQSAFLEESFKEHSTLNPKQKLALAKQL 237
                  ER+SSR SDD+E   SARKKLRLSK+QSAFLEESFKEHSTLNPKQK+ALAKQL
Sbjct: 157 GGGGGGGERSSSRASDDDEG-ASARKKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQL 216

[Close]

BLAST of Sed0022520.2 vs. ExPASy TrEMBL
Match: A0A6J1DAZ1 (homeobox-leucine zipper protein HOX11 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019325 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 3.7e-76
Identity = 184/281 (65.48%), Postives = 200/281 (71.17%), Query Frame = 0


Query: 1   MELALRLGDYSPNSDKPFGLLSKP------SSSSSLMALGFCV------------ASRSP 60
           MELAL LGD   N++KPFG LSKP      SS+S  MALGFCV             S S 
Sbjct: 1   MELALSLGDTPTNNNKPFGFLSKPSKLSSSSSASPFMALGFCVGLARDSASASASGSGSG 60

Query: 61  SRSIHDD--------DDD---DDDDDDEEKMIARGSVSGLDPPVQLDLLPLAPVPRSSHQ 120
           S SIHDD        DDD   D++DDD+E++I  GS SG DPPVQLDLLP APVPRS H 
Sbjct: 61  SASIHDDQGREVREEDDDEEEDEEDDDDERIILPGSGSGSDPPVQLDLLPPAPVPRSHHS 120

Query: 121 SSSHLTFPWLSDRLMPELGCSE-GAEKGLDVNRLPAAG--------------ALSSPNGN 180
           SSSHL FPWLSD LM E GCS+ GAE+ LDVNRLPA G               +SSPN +
Sbjct: 121 SSSHLPFPWLSDHLMAERGCSDGGAERVLDVNRLPAVGPAEETDDRAAAAAAGMSSPN-S 180

Query: 181 TVSSFQMDFVVRNGGSGSRCIKRSPEMEMETERASSRMSDDEENIGSARKKLRLSKQQSA 238
            VSSFQMDF VRNGG      KRS + EMETERASSR+SDD+EN GSARKKLRLSK+QSA
Sbjct: 181 AVSSFQMDFGVRNGGGS----KRSSDFEMETERASSRISDDDEN-GSARKKLRLSKEQSA 240

[Close]

BLAST of Sed0022520.2 vs. ExPASy TrEMBL
Match: A0A6J1DDA9 (homeobox-leucine zipper protein HOX11 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019325 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 2.1e-71
Identity = 178/280 (63.57%), Postives = 193/280 (68.93%), Query Frame = 0


Query: 1   MELALRLGDYSPNSDKPFGLLSKP------SSSSSLMALGFCV------------ASRSP 60
           MELAL LGD   N++KPFG LSKP      SS+S  MALGFCV             S S 
Sbjct: 1   MELALSLGDTPTNNNKPFGFLSKPSKLSSSSSASPFMALGFCVGLARDSASASASGSGSG 60

Query: 61  SRSIHDD--------DDD---DDDDDDEEKMIARGSVSGLDPPVQLDLLPLAPVPRSSHQ 120
           S SIHDD        DDD   D++DDD+E++I  GS SG DPPVQLDLLP APVPRS H 
Sbjct: 61  SASIHDDQGREVREEDDDEEEDEEDDDDERIILPGSGSGSDPPVQLDLLPPAPVPRSHHS 120

Query: 121 SSSHLTFPWLSDRLMPELGCSEGAEKGLDVNRLPAAG--------------ALSSPNGNT 180
           SSSHL FPWLSD          GAE+ LDVNRLPA G               +SSPN + 
Sbjct: 121 SSSHLPFPWLSDHY-------GGAERVLDVNRLPAVGPAEETDDRAAAAAAGMSSPN-SA 180

Query: 181 VSSFQMDFVVRNGGSGSRCIKRSPEMEMETERASSRMSDDEENIGSARKKLRLSKQQSAF 238
           VSSFQMDF VRNGG      KRS + EMETERASSR+SDD+EN GSARKKLRLSK+QSAF
Sbjct: 181 VSSFQMDFGVRNGGGS----KRSSDFEMETERASSRISDDDEN-GSARKKLRLSKEQSAF 240

[Close]

BLAST of Sed0022520.2 vs. ExPASy TrEMBL
Match: A0A6J1EUG8 (homeobox-leucine zipper protein HOX11-like OS=Cucurbita moschata OX=3662 GN=LOC111436719 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 6.3e-68
Identity = 173/258 (67.05%), Postives = 190/258 (73.64%), Query Frame = 0


Query: 1   MELALRLGDYSPNSDKPFGLLSKPSSSSSLMALGFCV------ASRSPSRSIHDDDD--- 60
           MEL LRLGD +PNS+ PFG+ S P SSSSLMALGFCV       S S    +HD+D    
Sbjct: 1   MELGLRLGD-APNSNNPFGVRSIP-SSSSLMALGFCVGLGHGSGSGSGFGRVHDEDGRDV 60

Query: 61  DDDDDDDEEKMIARGSVSGLDPPVQLDLLPLAPVPRSSHQSSSHLTFPWLSDRLMPELGC 120
            D+D+DD+EK I  GS  GL PPVQLDLLPLAPVPRSSHQSSS L F  LS  LMPELGC
Sbjct: 61  KDEDEDDDEKTIP-GSGYGLGPPVQLDLLPLAPVPRSSHQSSSPLPFSCLSHPLMPELGC 120

Query: 121 SEGAEKGLDVNRLPAAGAL-----------SSPNGNTVSSFQMDFVVRNGGSGSRC-IKR 180
           +   +K LDVNR PA  A             SPN +TV+SFQMDF VRNGG   R   KR
Sbjct: 121 T---DKVLDVNRPPALAAAVAMIPAEETEDQSPN-STVTSFQMDFGVRNGGGRGRTRSKR 180

Query: 181 SPEMEMETERASSRMSDDEENIGSARKKLRLSKQQSAFLEESFKEHSTLNPKQKLALAKQ 238
           S +MEME ER+SSRMSDDEEN  SARKKLRLSK+QSAFLE+SFK+HSTLNPKQK ALAKQ
Sbjct: 181 SSDMEMEKERSSSRMSDDEEN-ASARKKLRLSKEQSAFLEQSFKQHSTLNPKQKAALAKQ 240

[Close]

BLAST of Sed0022520.2 vs. ExPASy TrEMBL
Match: A0A6J1I329 (homeobox-leucine zipper protein HOX11-like OS=Cucurbita maxima OX=3661 GN=LOC111470099 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.9e-64
Identity = 170/267 (63.67%), Postives = 189/267 (70.79%), Query Frame = 0


Query: 1   MELALRLGDYSPNSDKPFGLLSKPS---SSSSLMALGFCV------------ASRSPSRS 60
           MEL LRLGD +PNS+ PFG+ S PS   SSSSLMALGFCV             S S S  
Sbjct: 1   MELGLRLGD-APNSNNPFGVRSIPSHNLSSSSLMALGFCVGLGHGSGSGSGSGSGSGSGR 60

Query: 61  IHDDDD---DDDDDDDEEKMIARGSVSGLDPPVQLDLLPLAPVPRSSHQSSSHLTFPWLS 120
           + D+D     D+D+ D+EK I  GS  GLDPPVQLDLLPLAPVPRSS QSSS L F  L 
Sbjct: 61  VRDEDGRDVKDEDEKDDEKTIP-GSGYGLDPPVQLDLLPLAPVPRSSPQSSSPLPFSCLP 120

Query: 121 DRLMPELGCSEGAEKGLDVNRLPAAGAL-----------SSPNGNTVSSFQMDFVVRNGG 180
             LMPELGC+   +K LDV+R PA  A             SPN +TV+SFQMDF VRNGG
Sbjct: 121 HPLMPELGCT---DKVLDVSRPPALAAAVAMIPAEETEDKSPN-STVTSFQMDFGVRNGG 180

Query: 181 SGSRC-IKRSPEMEMETERASSRMSDDEENIGSARKKLRLSKQQSAFLEESFKEHSTLNP 238
              R   KRS +MEMETER+SSR+SDDEEN  SARKKLRLSK+QSAFLE+ FK+HSTLNP
Sbjct: 181 GRGRTRSKRSSDMEMETERSSSRISDDEEN-ASARKKLRLSKEQSAFLEQCFKQHSTLNP 240

[Close]

BLAST of Sed0022520.2 vs. ExPASy TrEMBL
Match: A0A6J1J647 (homeobox-leucine zipper protein HOX11-like OS=Cucurbita maxima OX=3661 GN=LOC111481689 PE=3 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 4.4e-61
Identity = 166/267 (62.17%), Postives = 179/267 (67.04%), Query Frame = 0


Query: 1   MELALRLGDYSPNSDKPFGLLS------KPSSSSSLMALGFCV----------ASRSPSR 60
           MELAL LGD +P S+KPFG LS        SSSSSLMALGFCV          AS SPS 
Sbjct: 1   MELALSLGD-APISNKPFGFLSNGVSKLSSSSSSSLMALGFCVGLAHDSASASASGSPSG 60

Query: 61  SIHDDDDDDDDDDDEEKMIARGSVSGLDPPVQLDLLPLAPVPRSSHQSSSHLTFPWLSDR 120
           S+HDDDD++DDD+ + KM+    +SG DPPVQLDLLP APVPR     SSHL FPWLSD 
Sbjct: 61  SVHDDDDEEDDDNHDRKMV----LSGSDPPVQLDLLPSAPVPR-----SSHLRFPWLSDH 120

Query: 121 LMPELGCSEGAEK-GLDVNRLPA-------------AGALSSPNGNTVSSFQMDFVVRNG 180
           L+P     EG E+  LDVNR PA               ALSSPN +TVSSFQMDF V   
Sbjct: 121 LIP-----EGEERVALDVNRRPAVAAAEETEDRATVTAALSSPN-STVSSFQMDFGV--- 180

Query: 181 GSGSRCIKRSPEMEMETERASSRMSDDEENIGSARKKLRLSKQQSAFLEESFKEHSTLNP 238
                             RASSR+SDDEEN GSARKKLRLSK QSAFLEESFKEHSTLNP
Sbjct: 181 ------------------RASSRISDDEEN-GSARKKLRLSKDQSAFLEESFKEHSTLNP 229

[Close]

BLAST of Sed0022520.2 vs. TAIR 10
Match: AT5G06710.1 (homeobox from Arabidopsis thaliana )

HSP 1 Score: 134.4 bits (337), Expect = 1.2e-31
Identity = 112/257 (43.58%), Postives = 145/257 (56.42%), Query Frame = 0


Query: 1   MELALRLGDYSPNSDKPFGLLSK---------PSSSSSLMALGFCVA---------SRSP 60
           MELAL LGD   N+ K F  + K          S+S+S   LGFC+A         S S 
Sbjct: 1   MELALSLGD---NTKKQFSFMEKNSKINNPSVSSTSTSEKDLGFCMALDVAFGGHRSLSS 60

Query: 61  SRSIHDDDDDDDDDDDEEKMIARGSVSGLDPPVQLDLLPLAPVPRSSHQSSSHLTFPWLS 120
           S S   +D+        +K       S +DPP+QL L     +P +S             
Sbjct: 61  SSSPSVEDEKKKPAPRAKKSDEFRVSSSVDPPLQLQLHFPNWLPENSKGRQG-------- 120

Query: 121 DRLMPELGCSEGAEKGLDVNRLPAAGALSSPNGNTVSSFQMDFVVRNGGSGSRCIKRSPE 180
              MP LG +   E+  +      + ++S P+  T SSFQ+DF +++ G   R  KR  +
Sbjct: 121 -GRMP-LGAATVVEEEEEEEEAVPSMSVSPPDSVT-SSFQLDFGIKSYGYERRSNKR--D 180

Query: 181 MEMETERASSRMS--DDEENIGSARKKLRLSKQQSAFLEESFKEHSTLNPKQKLALAKQL 238
           ++ E ER++SR S  D+++  GS RKKLRLSK QSAFLE+SFKEHSTLNPKQK+ALAKQL
Sbjct: 181 IDDEVERSASRASNEDNDDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQL 240

[Close]

BLAST of Sed0022520.2 vs. TAIR 10
Match: AT2G22800.1 (Homeobox-leucine zipper protein family )

HSP 1 Score: 112.1 bits (279), Expect = 6.5e-25
Identity = 68/100 (68.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 138 VSSFQMDFVVRNGGSGSRCIKRSPEMEMETERASSRMSDDEENIGSARKKLRLSKQQSAF 197
           VSSF    VV+    G    + SPE E  TER  S   +DEE I SARKKLRL+KQQSA 
Sbjct: 69  VSSFSSGRVVKRERDGG---EESPEEEEMTERVISDYHEDEEGI-SARKKLRLTKQQSAL 128

Query: 198 LEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRAR 238
           LEESFK+HSTLNPKQK  LA+QLNLRPRQVEVWFQNRRAR
Sbjct: 129 LEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRAR 164

[Close]

BLAST of Sed0022520.2 vs. TAIR 10
Match: AT3G60390.1 (homeobox-leucine zipper protein 3 )

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-24
Identity = 84/193 (43.52%), Postives = 111/193 (57.51%), Query Frame = 0


Query: 82  LAPVPRSSHQSSSHLTFPWLSDRLMPE------LGCSEGAE---------KGLDVNRLPA 141
           L P+P +S+ SSSH+     S+   P+      +   + +E         +G+DVNR P+
Sbjct: 27  LNPMPLASYASSSHMQHMQQSNYNHPQKIQNTWINMFQSSERNSDMRSFLRGIDVNRAPS 86

Query: 142 ---------AGALSSPNGNTVSSF------QMDFVVRNGGSGSRCIKRSPEMEMETERAS 201
                       +SSPN +TVSS       + + +   G  G   ++     + E ERAS
Sbjct: 87  TVVVDVEDEGAGVSSPN-STVSSVMSGKKSERELMAAAGAVGGGRVE-----DNEIERAS 146

Query: 202 SRM---SDDEENIG----SARKKLRLSKQQSAFLEESFKEHSTLNPKQKLALAKQLNLRP 238
             +   SDDE+  G    S+RKKLRLSK+Q+  LEE+FKEHSTLNPKQK+ALAKQLNLR 
Sbjct: 147 CSLGGGSDDEDGSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRT 206

[Close]

BLAST of Sed0022520.2 vs. TAIR 10
Match: AT4G17460.1 (Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein )

HSP 1 Score: 108.6 bits (270), Expect = 7.2e-24
Identity = 79/175 (45.14%), Postives = 102/175 (58.29%), Query Frame = 0


Query: 74  PVQLDLLPLAPVPRSSHQSSSHLTFPWLSDRLMPELGCSEGAEKGLDVNRLPAA------ 133
           P+QL+L P      +S   S+   FPW    +       +   + +DVN LP        
Sbjct: 21  PLQLNLKP------TSSPMSNLQMFPWNQTLVSSSDQQKQQFLRKIDVNSLPTTVDLEEE 80

Query: 134 GALSSPNGNTVS--SFQMDFVVRNGGSGSRCIKRSPEMEMETERASSR-MSDDEENIG-- 193
             +SSPN    S  S +     R G SG  C     ++++  +R+SSR  SD+EE+ G  
Sbjct: 81  TGVSSPNSTISSTVSGKRRSTEREGTSGGGC---GDDLDITLDRSSSRGTSDEEEDYGGE 140

Query: 194 SARKKLRLSKQQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRAR 238
           + RKKLRLSK QSA LE++FKEH+TLNPKQKLALAK+L L  RQVEVWFQNRRAR
Sbjct: 141 TCRKKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRAR 186

[Close]

BLAST of Sed0022520.2 vs. TAIR 10
Match: AT5G47370.1 (Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein )

HSP 1 Score: 107.8 bits (268), Expect = 1.2e-23
Identity = 76/172 (44.19%), Postives = 98/172 (56.98%), Query Frame = 0


Query: 74  PVQLDLLPLAPVPRSSHQSSSHLTFPWLSDRLMPELGCSEGAEKGLDVNRLPAA------ 133
           P+Q++L P + +  +  +   + TF   SD             + +DVN  P+       
Sbjct: 22  PLQMNLNPNSSLSNNLQRLPWNQTFDPTSDL------------RKIDVNSFPSTVNCEED 81

Query: 134 GALSSPNGNTVSSFQMDFVVRNGGSGSRCIKRSPEMEMETERASSRMSDDEENIG--SAR 193
             +SSPN    S+       R G SG+         E+  +R  SR + DEE  G  ++R
Sbjct: 82  TGVSSPNSTISSTISGKRSEREGISGTGVGSGDDHDEITPDRGYSRGTSDEEEDGGETSR 141

Query: 194 KKLRLSKQQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRAR 238
           KKLRLSK QSAFLEE+FKEH+TLNPKQKLALAK+LNL  RQVEVWFQNRRAR
Sbjct: 142 KKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRAR 181

The following BLAST results are available for this feature:

BLAST of Sed0022520.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151365.1	7.6e-76	65.48	homeobox-leucine zipper protein HOX11 isoform X1 [Momordica charantia]	[more]
XP_022151367.1	4.3e-71	63.57	homeobox-leucine zipper protein HOX11 isoform X2 [Momordica charantia]	[more]
XP_023539558.1	1.1e-69	66.67	homeobox-leucine zipper protein HOX11-like [Cucurbita pepo subsp. pepo]	[more]
XP_038905251.1	1.2e-68	66.54	homeobox-leucine zipper protein HOX11-like [Benincasa hispida]	[more]
KAG6596243.1	1.3e-67	66.79	Homeobox-leucine zipper protein HAT14, partial [Cucurbita argyrosperma subsp. so...	[more]

BLAST of Sed0022520.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46665	1.7e-30	43.58	Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana OX=3702 GN=HAT14 P...	[more]
A2Z1U1	6.1e-28	55.94	Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q67UE2	8.0e-28	39.31	Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q6YPD0	8.0e-28	47.72	Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
A2YW03	1.0e-27	47.72	Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]

BLAST of Sed0022520.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DAZ1	3.7e-76	65.48	homeobox-leucine zipper protein HOX11 isoform X1 OS=Momordica charantia OX=3673 ...	[more]
A0A6J1DDA9	2.1e-71	63.57	homeobox-leucine zipper protein HOX11 isoform X2 OS=Momordica charantia OX=3673 ...	[more]
A0A6J1EUG8	6.3e-68	67.05	homeobox-leucine zipper protein HOX11-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1I329	1.9e-64	63.67	homeobox-leucine zipper protein HOX11-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1J647	4.4e-61	62.17	homeobox-leucine zipper protein HOX11-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Sed0022520.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06710.1	1.2e-31	43.58	homeobox from Arabidopsis thaliana	[more]
AT2G22800.1	6.5e-25	68.00	Homeobox-leucine zipper protein family	[more]
AT3G60390.1	1.1e-24	43.52	homeobox-leucine zipper protein 3	[more]
AT4G17460.1	7.2e-24	45.14	Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein	[more]
AT5G47370.1	1.2e-23	44.19	Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 183..245 e-value: 1.4E-13 score: 61.1
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 185..238 e-value: 2.3E-15 score: 56.2
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 181..241 score: 16.114748
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 185..238 e-value: 4.5842E-16 score: 68.424
None	No IPR available	GENE3D	1.10.10.60		coord: 189..238 e-value: 2.5E-19 score: 70.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..61
None	No IPR available	PANTHER	PTHR45714	FAMILY NOT NAMED	coord: 1..241
None	No IPR available	PANTHER	PTHR45714:SF15	HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14	coord: 1..241
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 173..238

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0022520	Sed0022520	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0022520.2-five_prime_utr	Sed0022520.2-five_prime_utr-LG12:9306669..9306714	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0022520.2-exon	Sed0022520.2-exon-LG12:9306669..9307027	exon
Sed0022520.2-exon	Sed0022520.2-exon-LG12:9307575..9307891	exon
Sed0022520.2-exon	Sed0022520.2-exon-LG12:9308435..9309031	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0022520.2-cds	Sed0022520.2-cds-LG12:9306715..9307027	CDS
Sed0022520.2-cds	Sed0022520.2-cds-LG12:9307575..9307891	CDS
Sed0022520.2-cds	Sed0022520.2-cds-LG12:9308435..9308548	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0022520.2-three_prime_utr	Sed0022520.2-three_prime_utr-LG12:9308549..9309031	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0022520.2	Sed0022520.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding