Sed0021903.1 (mRNA) Chayote v1

Overview


Name	Sed0021903.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	CCHC-type domain-containing protein
Location	LG01: 10416037 .. 10417747 (+)
Sequence length	1539
RNA-Seq Expression	Sed0021903.1
Synteny	Sed0021903.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCTTTCCAGTTTGCACAAATGATGGAAAATTTGGACTTAGCTGAGCAGGAGGCCCAAGGGGTCTTTGAACTCGAGGATAACGATATCTCAAACTATGAAAAGGAGCTGGGTTGTGTGGTGGCGTTCAAGATTTTTTCGGAGGTTCTGTTCAGCCCAAATGCGTTAAAAAAACTCATTCCAAAAATATGGAACATAGATCAAAAGGTTACTCTGGAATCAGTGGGAGGTAATATTTTTATTTGTACTTTTTCTAATAAAATAGTGAAGGAAAGAGTGCTTGAGTCGAGTCCTTGGATTTTTAACAATTCTATTCTGCTATTCGAGCAAATGACCGGGGATAAACGGGTCTCGGAGCTTGAGTTTGGTTTTGCTCAATTTTGGGTTCGCCTCCACGATGTCCCTCTGGCTTGTCACACAGAAGCCAATGCAAAAGGATTAGGAAATATGATAGGCAAATTTATTGGATGGGACTATGAAGGGGATCAAAGAAATAGGGGAAAATTCCTGAGAGTAAAGGTGTTGACTGACATTCGTTTACCTTTGAGAAGAGCCTTGAAATTGAAGAGCGGGGCTATGGCTCCTGAGAAATGGGTGCGTTTATCCTATAAAAAACTGCCTGAGTTCTATCGAGGTTGTGGAAGAGTCGGCCATTTAGCGATGAATTGCAGTTTTGTGGTCATTGGTGAGGGTATCCCATTTCCTTTTGGAGAGGAGTTGAGAGAACCAACAAAGCCATTTTAGGGGAGAAAAACCTTTAATTCAGAGACAAGGAGGACGAGGAAAAGGTCGCGGAAGAGGTCGAGAAGAAGATGTTCGAGCAGAAAACTCATGGTGTGGAGAAGATCTTGCAGAGGAAGAAGCCATTCTTTGCTGCAAAGAAGGGAGAGAGGCGATTTCGATGGATCTTGAGCGGAGAATGGCCGGAAACGGCTACTCGGGTGCTGCCTCGGGAGCTCGCGATTCGAAAGGTCAAATTCAATCTGAGGGATTTGCAGAATTTGGGGGCAAGTCAGGTACGGAGCTGGAAGATGATATTATCAGAAGGGAAAATCGTGAAAAATTTGGAGGAAATAAGGGACACATGGCAGAGGATGATAAGGTCGTAACTAATGAAAAGGGGAAAAGTAAAGTTGTTATGGAAGGGAGGAATGAATTACTATTTGGCCATTTTGATATTCATATAAAAACCCATGATGGATTTGATTTTAAAAAGTCAGAGCATGGGCAAGCTAAAGGAATTAAAATAAAAGAGGTGGGGCCTGATGCTTTCAATTTAAATAAAGAGTTTAAAGGGAATTTTAAAATTCCTTTAGTTCATGTTGAGCCAGATTTTAAGTGTTTTAGTGGGCCACTTTTTAAAGTGACTTTGGAGGAGAATGAAAATCCTTTTGTTCCTCAACAAAAAATTATGTCTTCTGCTGCAGAAAAGTTGATTGATTTTGAATTTGATCCAAAAAAATTAGCTTCCAAAAATAATAAAAGGTTTGTTATTAGAGATGATGAGGGACTATTAAAAATGGAAAAATCTTTAAGGAAAAATAAGGAATTGGATTATGAAGGAGAGGAGAGTGGTGGGAAGAAAGAATGTGAGAAGCTTTCAGTAATCAAATGGAAGAGACGTGCTCGGCAAGGAGAGAGGCATTTAGAATCTTCAACTAATTGTGTATTGAAAAAGGAAGATGGGCTAATTGGAAAAAAAACATGA

mRNA sequence

ATGGATGCTTTCCAGTTTGCACAAATGATGGAAAATTTGGACTTAGCTGAGCAGGAGGCCCAAGGGGTCTTTGAACTCGAGGATAACGATATCTCAAACTATGAAAAGGAGCTGGGTTGTGTGGTGGCGTTCAAGATTTTTTCGGAGGTTCTGTTCAGCCCAAATGCGTTAAAAAAACTCATTCCAAAAATATGGAACATAGATCAAAAGGTTACTCTGGAATCAGTGGGAGGTAATATTTTTATTTGTACTTTTTCTAATAAAATAGTGAAGGAAAGAGTGCTTGAGTCGAGTCCTTGGATTTTTAACAATTCTATTCTGCTATTCGAGCAAATGACCGGGGATAAACGGGTCTCGGAGCTTGAGTTTGGTTTTGCTCAATTTTGGGTTCGCCTCCACGATGTCCCTCTGGCTTGTCACACAGAAGCCAATGCAAAAGGATTAGGAAATATGATAGGCAAATTTATTGGATGGGACTATGAAGGGGATCAAAGAAATAGGGGAAAATTCCTGAGAGTAAAGGTGTTGACTGACATTCGTTTACCTTTGAGAAGAGCCTTGAAATTGAAGAGCGGGGCTATGGCTCCTGAGAAATGGAGACAAGGAGGACGAGGAAAAGGTCGCGGAAGAGGTCGAGAAGAAGATGTTCGAGCAGAAAACTCATGGTGTGGAGAAGATCTTGCAGAGGAAGAAGCCATTCTTTGCTGCAAAGAAGGGAGAGAGGCGATTTCGATGGATCTTGAGCGGAGAATGGCCGGAAACGGCTACTCGGGTGCTGCCTCGGGAGCTCGCGATTCGAAAGGTCAAATTCAATCTGAGGGATTTGCAGAATTTGGGGGCAAGTCAGGTACGGAGCTGGAAGATGATATTATCAGAAGGGAAAATCGTGAAAAATTTGGAGGAAATAAGGGACACATGGCAGAGGATGATAAGGTCGTAACTAATGAAAAGGGGAAAAGTAAAGTTGTTATGGAAGGGAGGAATGAATTACTATTTGGCCATTTTGATATTCATATAAAAACCCATGATGGATTTGATTTTAAAAAGTCAGAGCATGGGCAAGCTAAAGGAATTAAAATAAAAGAGGTGGGGCCTGATGCTTTCAATTTAAATAAAGAGTTTAAAGGGAATTTTAAAATTCCTTTAGTTCATGTTGAGCCAGATTTTAAGTGTTTTAGTGGGCCACTTTTTAAAGTGACTTTGGAGGAGAATGAAAATCCTTTTGTTCCTCAACAAAAAATTATGTCTTCTGCTGCAGAAAAGTTGATTGATTTTGAATTTGATCCAAAAAAATTAGCTTCCAAAAATAATAAAAGGTTTGTTATTAGAGATGATGAGGGACTATTAAAAATGGAAAAATCTTTAAGGAAAAATAAGGAATTGGATTATGAAGGAGAGGAGAGTGGTGGGAAGAAAGAATGTGAGAAGCTTTCAGTAATCAAATGGAAGAGACGTGCTCGGCAAGGAGAGAGGCATTTAGAATCTTCAACTAATTGTGTATTGAAAAAGGAAGATGGGCTAATTGGAAAAAAAACATGA

Coding sequence (CDS)

ATGGATGCTTTCCAGTTTGCACAAATGATGGAAAATTTGGACTTAGCTGAGCAGGAGGCCCAAGGGGTCTTTGAACTCGAGGATAACGATATCTCAAACTATGAAAAGGAGCTGGGTTGTGTGGTGGCGTTCAAGATTTTTTCGGAGGTTCTGTTCAGCCCAAATGCGTTAAAAAAACTCATTCCAAAAATATGGAACATAGATCAAAAGGTTACTCTGGAATCAGTGGGAGGTAATATTTTTATTTGTACTTTTTCTAATAAAATAGTGAAGGAAAGAGTGCTTGAGTCGAGTCCTTGGATTTTTAACAATTCTATTCTGCTATTCGAGCAAATGACCGGGGATAAACGGGTCTCGGAGCTTGAGTTTGGTTTTGCTCAATTTTGGGTTCGCCTCCACGATGTCCCTCTGGCTTGTCACACAGAAGCCAATGCAAAAGGATTAGGAAATATGATAGGCAAATTTATTGGATGGGACTATGAAGGGGATCAAAGAAATAGGGGAAAATTCCTGAGAGTAAAGGTGTTGACTGACATTCGTTTACCTTTGAGAAGAGCCTTGAAATTGAAGAGCGGGGCTATGGCTCCTGAGAAATGGAGACAAGGAGGACGAGGAAAAGGTCGCGGAAGAGGTCGAGAAGAAGATGTTCGAGCAGAAAACTCATGGTGTGGAGAAGATCTTGCAGAGGAAGAAGCCATTCTTTGCTGCAAAGAAGGGAGAGAGGCGATTTCGATGGATCTTGAGCGGAGAATGGCCGGAAACGGCTACTCGGGTGCTGCCTCGGGAGCTCGCGATTCGAAAGGTCAAATTCAATCTGAGGGATTTGCAGAATTTGGGGGCAAGTCAGGTACGGAGCTGGAAGATGATATTATCAGAAGGGAAAATCGTGAAAAATTTGGAGGAAATAAGGGACACATGGCAGAGGATGATAAGGTCGTAACTAATGAAAAGGGGAAAAGTAAAGTTGTTATGGAAGGGAGGAATGAATTACTATTTGGCCATTTTGATATTCATATAAAAACCCATGATGGATTTGATTTTAAAAAGTCAGAGCATGGGCAAGCTAAAGGAATTAAAATAAAAGAGGTGGGGCCTGATGCTTTCAATTTAAATAAAGAGTTTAAAGGGAATTTTAAAATTCCTTTAGTTCATGTTGAGCCAGATTTTAAGTGTTTTAGTGGGCCACTTTTTAAAGTGACTTTGGAGGAGAATGAAAATCCTTTTGTTCCTCAACAAAAAATTATGTCTTCTGCTGCAGAAAAGTTGATTGATTTTGAATTTGATCCAAAAAAATTAGCTTCCAAAAATAATAAAAGGTTTGTTATTAGAGATGATGAGGGACTATTAAAAATGGAAAAATCTTTAAGGAAAAATAAGGAATTGGATTATGAAGGAGAGGAGAGTGGTGGGAAGAAAGAATGTGAGAAGCTTTCAGTAATCAAATGGAAGAGACGTGCTCGGCAAGGAGAGAGGCATTTAGAATCTTCAACTAATTGTGTATTGAAAAAGGAAGATGGGCTAATTGGAAAAAAAACATGA

Protein sequence

MDAFQFAQMMENLDLAEQEAQGVFELEDNDISNYEKELGCVVAFKIFSEVLFSPNALKKLIPKIWNIDQKVTLESVGGNIFICTFSNKIVKERVLESSPWIFNNSILLFEQMTGDKRVSELEFGFAQFWVRLHDVPLACHTEANAKGLGNMIGKFIGWDYEGDQRNRGKFLRVKVLTDIRLPLRRALKLKSGAMAPEKWRQGGRGKGRGRGREEDVRAENSWCGEDLAEEEAILCCKEGREAISMDLERRMAGNGYSGAASGARDSKGQIQSEGFAEFGGKSGTELEDDIIRRENREKFGGNKGHMAEDDKVVTNEKGKSKVVMEGRNELLFGHFDIHIKTHDGFDFKKSEHGQAKGIKIKEVGPDAFNLNKEFKGNFKIPLVHVEPDFKCFSGPLFKVTLEENENPFVPQQKIMSSAAEKLIDFEFDPKKLASKNNKRFVIRDDEGLLKMEKSLRKNKELDYEGEESGGKKECEKLSVIKWKRRARQGERHLESSTNCVLKKEDGLIGKKT

Homology

[Close]

BLAST of Sed0021903.1 vs. NCBI nr
Match: TXG53376.1 (hypothetical protein EZV62_022545 [Acer yangbiense])

HSP 1 Score: 131.0 bits (328), Expect = 3.0e-26
Identity = 75/192 (39.06%), Postives = 110/192 (57.29%), Query Frame = 0


Query: 1   MDAFQFAQMMENLDLAEQEAQGVFELEDNDISNYEKELGCVVAFKIFSEVLFSPNALKKL 60
           M A + A++ ENL LAE++   +   E+  I   +    C+V  K+ S    +  A K L
Sbjct: 1   MSALEIARLYENLSLAEEDGVVLEMSEETSIDGVKDVNRCLVG-KVLSYKKVNREAFKGL 60

Query: 61  IPKIWNIDQKVTLESVGGNIFICTFSNKIVKERVLESSPWIFNNSILLFEQMTGDKRVSE 120
           I +IW+   +V +ESVG N+F+  F+N   + RVL+  PW F NS+++ E+ TG+  VS+
Sbjct: 61  IEQIWSPFGQVEVESVGDNLFMFYFNNGEDRNRVLQRGPWHFGNSLIVLEKSTGEGNVSK 120

Query: 121 LEFGFAQFWVRLHDVPLACHTEANAKGLGNMIGKFIGWDYEGDQRNRGKFLRVKVLTDIR 180
           L F  A FWV++HD+P+ C     AK L   IG+ +    E  +   GKF+ VKV  DI 
Sbjct: 121 LGFNRADFWVQIHDIPILCMNRRTAKWLAKQIGEVVEIPSE-SRECWGKFMWVKVRIDIL 180

Query: 181 LPLRRALKLKSG 193
            PL+R LKLK G
Sbjct: 181 KPLKRWLKLKIG 190

[Close]

BLAST of Sed0021903.1 vs. NCBI nr
Match: TXG54113.1 (hypothetical protein EZV62_019369 [Acer yangbiense])

HSP 1 Score: 120.6 bits (301), Expect = 4.1e-23
Identity = 59/189 (31.22%), Postives = 110/189 (58.20%), Query Frame = 0


Query: 1   MDAFQFAQMMENLDLAEQEAQGVFELEDNDISNYEKELGCVVAFKIFSEVLFSPNALKKL 60
           M+A + A++   L + E+E + V  L+ N I    + L   +  K+F+  L + +A   +
Sbjct: 1   MNADELARLCSALSVKEKE-RPVRTLDSNLIDKGSRRLSLCLVGKVFATKLVNRSAFMDV 60

Query: 61  IPKIWNIDQKVTLESVGGNIFICTFSNKIVKERVLESSPWIFNNSILLFEQMTGDKRVSE 120
           +  IW ++++V +E   GNIF+  F N   ++R+L   PW F+ +I++FE+ +G+  +  
Sbjct: 61  MTSIWRVNEEVEIEWAEGNIFVLNFKNLEDRKRILIGGPWSFDRAIIVFEEPSGEGDILN 120

Query: 121 LEFGFAQFWVRLHDVPLACHTEANAKGLGNMIGKFIGWDYEGDQRNRGKFLRVKVLTDIR 180
           + F  A+FW+++H++PL C TE     LG MIG+    D E  +   G+++RV+V+  ++
Sbjct: 121 MNFSKAEFWIQIHNLPLICMTEDIGIFLGKMIGEVRDIDLETAKEGNGRYIRVRVVISVK 180

Query: 181 LPLRRALKL 190
            PL R L++
Sbjct: 181 EPLMRCLRV 188

[Close]

BLAST of Sed0021903.1 vs. NCBI nr
Match: XP_042958241.1 (uncharacterized protein LOC122293864 [Carya illinoinensis] >XP_042964711.1 uncharacterized protein LOC122298932 [Carya illinoinensis])

HSP 1 Score: 119.0 bits (297), Expect = 1.2e-22
Identity = 62/179 (34.64%), Postives = 98/179 (54.75%), Query Frame = 0


Query: 7   AQMMENLDLAEQEAQGVFELEDNDISNYEKELGCVVAFKIFSEVLFSPNALKKLIPKIWN 66
           + + E L L ++E Q + E+   +IS    +    +   + S+   +  AL   +PKIWN
Sbjct: 7   SSLYEGLKLTDEEKQEI-EVSTEEISLSTSKSKLCIMVCLISDKETNRGALMGTLPKIWN 66

Query: 67  IDQKVTLESVGGNIFICTFSNKIVKERVLESSPWIFNNSILLFEQMTGDKRVSELEFGFA 126
            + K+  + VG N F+  F ++  K RVL   PW F+ S+L  +   G K + E++F F 
Sbjct: 67  AEGKIVFKEVGRNKFLVEFKSRSDKIRVLNGRPWSFDKSLLCIQDCEGAKSIKEMQFCFE 126

Query: 127 QFWVRLHDVPLACHTEANAKGLGNMIGKFIGWDYEGDQRNRGKFLRVKVLTDIRLPLRR 186
            FW++ HD+P A  T +  + LG+ +GK +  D +G +   GKFLRVKV+ DI  PL R
Sbjct: 127 PFWIQCHDMPFAGMTASMGQKLGSSLGKVLMVDTDGSETCWGKFLRVKVMLDITKPLAR 184

[Close]

BLAST of Sed0021903.1 vs. NCBI nr
Match: TXG57113.1 (hypothetical protein EZV62_018426 [Acer yangbiense])

HSP 1 Score: 119.0 bits (297), Expect = 1.2e-22
Identity = 68/192 (35.42%), Postives = 103/192 (53.65%), Query Frame = 0


Query: 1   MDAFQFAQMMENLDLAEQEAQGVFELEDNDISNYEKELGCVVAFKIFSEVLFSPNALKKL 60
           M   +  ++ E+L +AE++   +   E+  +   E    C+V  K+ S    +  A K L
Sbjct: 1   MSEMEITKLYESLFIAEEDRAILEMSEETSVDGVEDVDRCLVV-KVLSGKKVNREAFKGL 60

Query: 61  IPKIWNIDQKVTLESVGGNIFICTFSNKIVKERVLESSPWIFNNSILLFEQMTGDKRVSE 120
           I +IWN + +V +E VG N F+  F N   + RV    PW F NS+++ E+  G   +S+
Sbjct: 61  IEQIWNPNGQVEVELVGDNRFMFYFINNEDRNRVWNRGPWHFGNSLIVLEKPVGPGNISK 120

Query: 121 LEFGFAQFWVRLHDVPLACHTEANAKGLGNMIGKFIGWDYEGDQRNRGKFLRVKVLTDIR 180
           L F  A FWV++HD+P+ C     AK L   IG+ +    E  +   GKF+RVKV  DI 
Sbjct: 121 LSFNKADFWVQIHDIPILCMNRRTAKWLAEQIGEVVEIPLE-SRECWGKFMRVKVRIDIL 180

Query: 181 LPLRRALKLKSG 193
            PL+R L+LK G
Sbjct: 181 KPLKRWLRLKLG 190

[Close]

BLAST of Sed0021903.1 vs. NCBI nr
Match: XP_042961424.1 (uncharacterized protein LOC122296079 [Carya illinoinensis])

HSP 1 Score: 119.0 bits (297), Expect = 1.2e-22
Identity = 62/179 (34.64%), Postives = 98/179 (54.75%), Query Frame = 0


Query: 7   AQMMENLDLAEQEAQGVFELEDNDISNYEKELGCVVAFKIFSEVLFSPNALKKLIPKIWN 66
           + + E L L ++E Q + E+   +IS    +    +   + S+   +  AL   +PKIWN
Sbjct: 7   SSLYEGLKLTDEEKQEI-EVSTEEISLSTSKSKLCIMVCLISDKETNRGALMGTLPKIWN 66

Query: 67  IDQKVTLESVGGNIFICTFSNKIVKERVLESSPWIFNNSILLFEQMTGDKRVSELEFGFA 126
            + K+  + VG N F+  F ++  K RVL   PW F+ S+L  +   G K + E++F F 
Sbjct: 67  AEGKIVFKEVGRNKFLVEFKSRSDKIRVLNGRPWSFDKSLLCIQDCEGAKSIKEMQFCFE 126

Query: 127 QFWVRLHDVPLACHTEANAKGLGNMIGKFIGWDYEGDQRNRGKFLRVKVLTDIRLPLRR 186
            FW++ HD+P A  T +  + LG+ +GK +  D +G +   GKFLRVKV+ DI  PL R
Sbjct: 127 PFWIQCHDMPFAGMTASMGQKLGSSLGKVLMVDTDGSETCWGKFLRVKVMLDITKPLAR 184

[Close]

BLAST of Sed0021903.1 vs. ExPASy TrEMBL
Match: A0A5C7HB59 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022545 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.5e-26
Identity = 75/192 (39.06%), Postives = 110/192 (57.29%), Query Frame = 0


Query: 1   MDAFQFAQMMENLDLAEQEAQGVFELEDNDISNYEKELGCVVAFKIFSEVLFSPNALKKL 60
           M A + A++ ENL LAE++   +   E+  I   +    C+V  K+ S    +  A K L
Sbjct: 1   MSALEIARLYENLSLAEEDGVVLEMSEETSIDGVKDVNRCLVG-KVLSYKKVNREAFKGL 60

Query: 61  IPKIWNIDQKVTLESVGGNIFICTFSNKIVKERVLESSPWIFNNSILLFEQMTGDKRVSE 120
           I +IW+   +V +ESVG N+F+  F+N   + RVL+  PW F NS+++ E+ TG+  VS+
Sbjct: 61  IEQIWSPFGQVEVESVGDNLFMFYFNNGEDRNRVLQRGPWHFGNSLIVLEKSTGEGNVSK 120

Query: 121 LEFGFAQFWVRLHDVPLACHTEANAKGLGNMIGKFIGWDYEGDQRNRGKFLRVKVLTDIR 180
           L F  A FWV++HD+P+ C     AK L   IG+ +    E  +   GKF+ VKV  DI 
Sbjct: 121 LGFNRADFWVQIHDIPILCMNRRTAKWLAKQIGEVVEIPSE-SRECWGKFMWVKVRIDIL 180

Query: 181 LPLRRALKLKSG 193
            PL+R LKLK G
Sbjct: 181 KPLKRWLKLKIG 190

[Close]

BLAST of Sed0021903.1 vs. ExPASy TrEMBL
Match: A0A5C7HA63 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_019369 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.0e-23
Identity = 59/189 (31.22%), Postives = 110/189 (58.20%), Query Frame = 0


Query: 1   MDAFQFAQMMENLDLAEQEAQGVFELEDNDISNYEKELGCVVAFKIFSEVLFSPNALKKL 60
           M+A + A++   L + E+E + V  L+ N I    + L   +  K+F+  L + +A   +
Sbjct: 1   MNADELARLCSALSVKEKE-RPVRTLDSNLIDKGSRRLSLCLVGKVFATKLVNRSAFMDV 60

Query: 61  IPKIWNIDQKVTLESVGGNIFICTFSNKIVKERVLESSPWIFNNSILLFEQMTGDKRVSE 120
           +  IW ++++V +E   GNIF+  F N   ++R+L   PW F+ +I++FE+ +G+  +  
Sbjct: 61  MTSIWRVNEEVEIEWAEGNIFVLNFKNLEDRKRILIGGPWSFDRAIIVFEEPSGEGDILN 120

Query: 121 LEFGFAQFWVRLHDVPLACHTEANAKGLGNMIGKFIGWDYEGDQRNRGKFLRVKVLTDIR 180
           + F  A+FW+++H++PL C TE     LG MIG+    D E  +   G+++RV+V+  ++
Sbjct: 121 MNFSKAEFWIQIHNLPLICMTEDIGIFLGKMIGEVRDIDLETAKEGNGRYIRVRVVISVK 180

Query: 181 LPLRRALKL 190
            PL R L++
Sbjct: 181 EPLMRCLRV 188

[Close]

BLAST of Sed0021903.1 vs. ExPASy TrEMBL
Match: A0A5C7HJ97 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_018426 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.7e-23
Identity = 68/192 (35.42%), Postives = 103/192 (53.65%), Query Frame = 0


Query: 1   MDAFQFAQMMENLDLAEQEAQGVFELEDNDISNYEKELGCVVAFKIFSEVLFSPNALKKL 60
           M   +  ++ E+L +AE++   +   E+  +   E    C+V  K+ S    +  A K L
Sbjct: 1   MSEMEITKLYESLFIAEEDRAILEMSEETSVDGVEDVDRCLVV-KVLSGKKVNREAFKGL 60

Query: 61  IPKIWNIDQKVTLESVGGNIFICTFSNKIVKERVLESSPWIFNNSILLFEQMTGDKRVSE 120
           I +IWN + +V +E VG N F+  F N   + RV    PW F NS+++ E+  G   +S+
Sbjct: 61  IEQIWNPNGQVEVELVGDNRFMFYFINNEDRNRVWNRGPWHFGNSLIVLEKPVGPGNISK 120

Query: 121 LEFGFAQFWVRLHDVPLACHTEANAKGLGNMIGKFIGWDYEGDQRNRGKFLRVKVLTDIR 180
           L F  A FWV++HD+P+ C     AK L   IG+ +    E  +   GKF+RVKV  DI 
Sbjct: 121 LSFNKADFWVQIHDIPILCMNRRTAKWLAEQIGEVVEIPLE-SRECWGKFMRVKVRIDIL 180

Query: 181 LPLRRALKLKSG 193
            PL+R L+LK G
Sbjct: 181 KPLKRWLRLKLG 190

[Close]

BLAST of Sed0021903.1 vs. ExPASy TrEMBL
Match: A0A5C7GU64 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_027487 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 9.8e-23
Identity = 63/192 (32.81%), Postives = 109/192 (56.77%), Query Frame = 0


Query: 1   MDAFQFAQMMENLDLAEQEAQGVFELEDNDISNYEKELGCVVAFKIFSEVLFSPNALKKL 60
           M   +  Q+ ENL L +++A  V E+ ++ I + ++++   +  K+ +    +  A K L
Sbjct: 1   MSEAEITQLYENLSLEDEDA-AVHEITEDYIQDGDEDVDRCLVGKVLTGKKVNREAFKGL 60

Query: 61  IPKIWNIDQKVTLESVGGNIFICTFSNKIVKERVLESSPWIFNNSILLFEQMTGDKRVSE 120
           I +IWN   +V +E VG N F+  F+NK  + +V    PW+F  S+++ E+  G   +++
Sbjct: 61  IEQIWNQFGQVEVELVGENTFMFHFTNKEYRNKVWNRGPWLFGKSLIVLEKPKGPGDITK 120

Query: 121 LEFGFAQFWVRLHDVPLACHTEANAKGLGNMIGKFIGWDYEGDQRNRGKFLRVKVLTDIR 180
           L+F  A FWV++HD+P+ C  +   K L   IG+ +    E  +   GK++RVKV  DI 
Sbjct: 121 LKFNQADFWVQIHDIPIMCMNQRTTKWLAEYIGEVVEIPTE-SRECWGKYVRVKVQVDIT 180

Query: 181 LPLRRALKLKSG 193
            PL+R L++K G
Sbjct: 181 KPLKRWLRIKLG 190

[Close]

BLAST of Sed0021903.1 vs. ExPASy TrEMBL
Match: A0A5C7HVP8 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_012570 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-22
Identity = 67/190 (35.26%), Postives = 105/190 (55.26%), Query Frame = 0


Query: 1   MDAFQFAQMMENLDLAEQEAQGVFELEDNDISNYEKELGCVVAFKIFSEVLFSPNALKKL 60
           M   + A++ ENL + +++++     ED +    E    C+V  K+ S    +    K +
Sbjct: 1   MGTTELARLCENLSIKDEDSKIHQIAEDVERVGVEDVEHCLVG-KVLSGKRVNREDFKSV 60

Query: 61  IPKIWNIDQKVTLESVGGNIFICTFSNKIVKERVLESSPWIFNNSILLFEQMTGDKRVSE 120
           I ++W+    V +E VG NIF+  F+N   + R+ +  PW F+ S+++ E+  G   +S+
Sbjct: 61  IKQLWSPFGNVEIEVVGENIFMFYFNNLEDRNRIWQRGPWHFDRSLIVLEKPEGTGNISQ 120

Query: 121 LEFGFAQFWVRLHDVPLACHTEANAKGLGNMIGKFIGWDYEGDQRNRGKFLRVKVLTDIR 180
           L F   +FWV++HD+P+ C     AK L   IGKFI    E  +   GKFLRVKVL DI 
Sbjct: 121 LSFDKVEFWVQIHDIPIMCMNRRTAKWLAEQIGKFIEIPME-SRECWGKFLRVKVLIDIS 180

Query: 181 LPLRRALKLK 191
            PL+R L+LK
Sbjct: 181 KPLKRWLRLK 188

The following BLAST results are available for this feature:

BLAST of Sed0021903.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TXG53376.1	3.0e-26	39.06	hypothetical protein EZV62_022545 [Acer yangbiense]	[more]
TXG54113.1	4.1e-23	31.22	hypothetical protein EZV62_019369 [Acer yangbiense]	[more]
XP_042958241.1	1.2e-22	34.64	uncharacterized protein LOC122293864 [Carya illinoinensis] >XP_042964711.1 uncha...	[more]
TXG57113.1	1.2e-22	35.42	hypothetical protein EZV62_018426 [Acer yangbiense]	[more]
XP_042961424.1	1.2e-22	34.64	uncharacterized protein LOC122296079 [Carya illinoinensis]	[more]

BLAST of Sed0021903.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0021903.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5C7HB59	1.5e-26	39.06	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022545 PE=4 SV=1	[more]
A0A5C7HA63	2.0e-23	31.22	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_019369 PE=4 SV=1	[more]
A0A5C7HJ97	5.7e-23	35.42	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01842...	[more]
A0A5C7GU64	9.8e-23	32.81	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02748...	[more]
A0A5C7HVP8	1.3e-22	35.26	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_012570 PE=4 SV=1	[more]

BLAST of Sed0021903.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 41..175 e-value: 2.1E-23 score: 82.5
None	No IPR available	PANTHER	PTHR31286:SF24	SUBFAMILY NOT NAMED	coord: 12..242
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 12..242

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0021903	Sed0021903	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0021903.1-exon	Sed0021903.1-exon-LG01:10416037..10416633	exon
Sed0021903.1-exon	Sed0021903.1-exon-LG01:10416806..10417747	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0021903.1-cds	Sed0021903.1-cds-LG01:10416037..10416633	CDS
Sed0021903.1-cds	Sed0021903.1-cds-LG01:10416806..10417747	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0021903.1	Sed0021903.1-protein	polypeptide