Sed0021519.1 (mRNA) Chayote v1

Overview


Name	Sed0021519.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Transmembrane protein
Location	LG01: 12369361 .. 12370225 (-)
Sequence length	865
RNA-Seq Expression	Sed0021519.1
Synteny	Sed0021519.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCAATAAAAAAAAATTCATTTACCTTTCCGTTCCAAATTCCTTCAAGCATGGGCCTCAACACACCGGAACGCGGCAGCTCCGTCCTGGCGTCGCCGAGGCGAGCGGCGGCGACCTTGCTCGTCTCTTTATCGACTCTGGTGGCGCTGTGTGCGAAACAAGCGAACAGAGCATCGAAGAAGCTCCAAACGAAACTGAAACTGAAGCAGTTGCCGCGATTAGAGGTCCGGCCGAAGAGTTTCATGAAGAGCATAAGCAGTACGGCGATGACGCTGATAACGAAGAAGAAGAACCACGGCGGCGCCGAAATAAAAGACGAGTGGGGAGACGACGGAGTGTGGCGGAAGACGATCTTGATGGGGGATAAGTGTGAGCCGTTGGATTTCTCGGGCGTAATTTACTACGATAGTAACGGAAAGCAGCTGAACGAAGTGCCTCCACGCTCGCCACGTGCCAGTCCCTTGCCTGCCTTGCTTGCAACCCGCCAGTATATATCTTAACGTTACCCGGCGGTGATTTCAGGTAGGTCACCCACGCGTGTGATTAGATGGGATGTGCGGCGTCGTTTTTATTTTGGCGGTGTTTTTCTTTTTTGCAAATTTCTATTTTTGTATAGTATTAAAGGTAAATTTTGTATGTCAAATATATATTTTGAAAGTAATCTTCGAAAATATTATGAATATGGATTTACTCAAAAAAAAAAAAAAAAGGTTATCAGTAAATAATTAGGTTCATACAACAAAATAAAACTTTACCAAACTATCATACTTTGGTAAGTTTTTTTTTTCCTAGGATCTATTTGTTTTTTAGACATGAGGAGTGGCACAACTCCTAAAAATCGTTGTTTATTTTTTTTGCAGTAAAT

mRNA sequence

CCTCAATAAAAAAAAATTCATTTACCTTTCCGTTCCAAATTCCTTCAAGCATGGGCCTCAACACACCGGAACGCGGCAGCTCCGTCCTGGCGTCGCCGAGGCGAGCGGCGGCGACCTTGCTCGTCTCTTTATCGACTCTGGTGGCGCTGTGTGCGAAACAAGCGAACAGAGCATCGAAGAAGCTCCAAACGAAACTGAAACTGAAGCAGTTGCCGCGATTAGAGGTCCGGCCGAAGAGTTTCATGAAGAGCATAAGCAGTACGGCGATGACGCTGATAACGAAGAAGAAGAACCACGGCGGCGCCGAAATAAAAGACGAGTGGGGAGACGACGGAGTGTGGCGGAAGACGATCTTGATGGGGGATAAGTGTGAGCCGTTGGATTTCTCGGGCGTAATTTACTACGATAGTAACGGAAAGCAGCTGAACGAAGTGCCTCCACGCTCGCCACGTGCCAGTCCCTTGCCTGCCTTGCTTGCAACCCGCCAGTATATATCTTAACGTTACCCGGCGGTGATTTCAGGTAGGTCACCCACGCGTGTGATTAGATGGGATGTGCGGCGTCGTTTTTATTTTGGCGGTGTTTTTCTTTTTTGCAAATTTCTATTTTTGTATAGTATTAAAGGTAAATTTTGTATGTCAAATATATATTTTGAAAGTAATCTTCGAAAATATTATGAATATGGATTTACTCAAAAAAAAAAAAAAAAGGTTATCAGTAAATAATTAGGTTCATACAACAAAATAAAACTTTACCAAACTATCATACTTTGGTAAGTTTTTTTTTTCCTAGGATCTATTTGTTTTTTAGACATGAGGAGTGGCACAACTCCTAAAAATCGTTGTTTATTTTTTTTGCAGTAAAT

Coding sequence (CDS)

ATGGGCCTCAACACACCGGAACGCGGCAGCTCCGTCCTGGCGTCGCCGAGGCGAGCGGCGGCGACCTTGCTCGTCTCTTTATCGACTCTGGTGGCGCTGTGTGCGAAACAAGCGAACAGAGCATCGAAGAAGCTCCAAACGAAACTGAAACTGAAGCAGTTGCCGCGATTAGAGGTCCGGCCGAAGAGTTTCATGAAGAGCATAAGCAGTACGGCGATGACGCTGATAACGAAGAAGAAGAACCACGGCGGCGCCGAAATAAAAGACGAGTGGGGAGACGACGGAGTGTGGCGGAAGACGATCTTGATGGGGGATAAGTGTGAGCCGTTGGATTTCTCGGGCGTAATTTACTACGATAGTAACGGAAAGCAGCTGAACGAAGTGCCTCCACGCTCGCCACGTGCCAGTCCCTTGCCTGCCTTGCTTGCAACCCGCCAGTATATATCTTAA

Protein sequence

MGLNTPERGSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLEVRPKSFMKSISSTAMTLITKKKNHGGAEIKDEWGDDGVWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLATRQYIS

Homology

[Close]

BLAST of Sed0021519.1 vs. NCBI nr
Match: XP_038894891.1 (uncharacterized protein LOC120083287 [Benincasa hispida])

HSP 1 Score: 220.7 bits (561), Expect = 8.4e-54
Identity = 121/163 (74.23%), Postives = 132/163 (80.98%), Query Frame = 0


Query: 1   MGLNTPER----------GSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLK 60
           MG  TPER          G SVLA+PRRAAATLL+SLSTLVALCAKQANRASKKLQTKLK
Sbjct: 1   MGQATPERGGSTSISISGGGSVLATPRRAAATLLISLSTLVALCAKQANRASKKLQTKLK 60

Query: 61  LKQLPRLE-----VRPKSFMKSISSTAMTLITKKKN-HGGAEIKDEWGDDGVWRKTILMG 120
            KQLPRLE     +RPK F+K+IS+TA+TLI KKKN HGG   ++EWGD GVW+K ILMG
Sbjct: 61  SKQLPRLELRSPQLRPKRFLKNISNTAITLIHKKKNKHGGGNTEEEWGDGGVWQKAILMG 120

Query: 121 DKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLATRQY 148
           DKCEPLDFSGVIYYDSNGKQLNEVP RSPRASPLPA LAT  +
Sbjct: 121 DKCEPLDFSGVIYYDSNGKQLNEVPLRSPRASPLPAFLATSHH 163

[Close]

BLAST of Sed0021519.1 vs. NCBI nr
Match: XP_008456286.1 (PREDICTED: uncharacterized protein LOC103496246 [Cucumis melo] >TYJ98977.1 uncharacterized protein E5676_scaffold248G001800 [Cucumis melo var. makuwa])

HSP 1 Score: 214.5 bits (545), Expect = 6.0e-52
Identity = 119/159 (74.84%), Postives = 130/159 (81.76%), Query Frame = 0


Query: 1   MGLNTPER--------GSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLK 60
           M  +TPER        G SVLA+PRRAAATLLVSLSTLVALCAKQANRASKKLQ KLK K
Sbjct: 1   MSQSTPERGGSTSISGGGSVLATPRRAAATLLVSLSTLVALCAKQANRASKKLQIKLKSK 60

Query: 61  QLPRLE-----VRPKSFMKSISSTAMTLITKKKNH--GGAEIKDEWGDDGVWRKTILMGD 120
           QLPRLE     +RPK F+K+IS+TA+TLI KKKN   GG + ++EWGD GVW+K ILMGD
Sbjct: 61  QLPRLELRSPQLRPKRFLKNISNTAITLIHKKKNKRGGGGDAEEEWGDGGVWQKAILMGD 120

Query: 121 KCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLAT 145
           KCEPLDFSGVIYYDSNGKQLNEVP RSPRASPLPA LAT
Sbjct: 121 KCEPLDFSGVIYYDSNGKQLNEVPLRSPRASPLPAFLAT 159

[Close]

BLAST of Sed0021519.1 vs. NCBI nr
Match: XP_022137455.1 (uncharacterized protein LOC111008895 [Momordica charantia])

HSP 1 Score: 211.8 bits (538), Expect = 3.9e-51
Identity = 115/159 (72.33%), Postives = 127/159 (79.87%), Query Frame = 0


Query: 1   MGLNTPERG------SSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQL 60
           MG  TPERG       SVLASP+RAAATLL+SLSTLVALCAK+ANR SKKLQTKLK KQ 
Sbjct: 1   MGHATPERGGSGSGSGSVLASPKRAAATLLISLSTLVALCAKEANRVSKKLQTKLKSKQF 60

Query: 61  PRLE-----VRPKSFMKSISSTAMTLITKKKN----HGGAEIKDEWGDDGVWRKTILMGD 120
           PRLE     VRPK F+KSIS TA+TL+ K KN     GG + +DEWGD G+W+K ILMGD
Sbjct: 61  PRLELRSPQVRPKRFLKSISDTAITLMQKNKNKKTKRGGCDAEDEWGDGGIWQKAILMGD 120

Query: 121 KCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLAT 145
           KCEPL+FSGVIYYDS GKQLNEVPPRSPRASPLP+ LAT
Sbjct: 121 KCEPLNFSGVIYYDSKGKQLNEVPPRSPRASPLPSYLAT 159

[Close]

BLAST of Sed0021519.1 vs. NCBI nr
Match: XP_023519722.1 (uncharacterized protein LOC111783076 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 205.7 bits (522), Expect = 2.8e-49
Identity = 113/150 (75.33%), Postives = 123/150 (82.00%), Query Frame = 0


Query: 2   GLNTPERGSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE--- 61
           G  +   G SVLASPRRAAATLLVSLSTLVALCAK ANRASKKLQTKLK KQLPRLE   
Sbjct: 10  GSTSISEGGSVLASPRRAAATLLVSLSTLVALCAKHANRASKKLQTKLKSKQLPRLELLS 69

Query: 62  --VRPKSFMKSISSTAMTLITKKKNH--GGAEIKDEWGDDGVWRKTILMGDKCEPLDFSG 121
             V PK  +KSIS+TA+TLI KKK +  GG +  +EWGD GVW+K I+MGDKCEPL+FSG
Sbjct: 70  SQVCPKRLLKSISNTAITLIHKKKKNKQGGGDAGEEWGDGGVWQKAIMMGDKCEPLNFSG 129

Query: 122 VIYYDSNGKQLNEVPPRSPRASPLPALLAT 145
           VIYYDSNGKQLNEVP RSPRASPLPA LAT
Sbjct: 130 VIYYDSNGKQLNEVPLRSPRASPLPAFLAT 159

[Close]

BLAST of Sed0021519.1 vs. NCBI nr
Match: XP_023001364.1 (uncharacterized protein LOC111495524 [Cucurbita maxima])

HSP 1 Score: 205.7 bits (522), Expect = 2.8e-49
Identity = 112/144 (77.78%), Postives = 121/144 (84.03%), Query Frame = 0


Query: 9   GSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-----VRPKS 68
           G SVLASPRRAAATLLVSLSTLVALCAK ANRASKKLQTKLK KQLPRLE     V PK 
Sbjct: 17  GGSVLASPRRAAATLLVSLSTLVALCAKHANRASKKLQTKLKSKQLPRLELLSSQVCPKR 76

Query: 69  FMKSISSTAMTLITKKK---NHGGAEIKDEWGDDGVWRKTILMGDKCEPLDFSGVIYYDS 128
            +KSIS+TA+TLI KKK    HG  + ++EWGD GVW+K I+MGDKCEPL+FSGVIYYDS
Sbjct: 77  LLKSISNTAITLIHKKKKKNKHGSGDTEEEWGDGGVWQKAIMMGDKCEPLNFSGVIYYDS 136

Query: 129 NGKQLNEVPPRSPRASPLPALLAT 145
           NGKQLNEVP RSPRASPLPA LAT
Sbjct: 137 NGKQLNEVPLRSPRASPLPAFLAT 160

[Close]

BLAST of Sed0021519.1 vs. ExPASy TrEMBL
Match: A0A5D3BIM5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001800 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.9e-52
Identity = 119/159 (74.84%), Postives = 130/159 (81.76%), Query Frame = 0


Query: 1   MGLNTPER--------GSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLK 60
           M  +TPER        G SVLA+PRRAAATLLVSLSTLVALCAKQANRASKKLQ KLK K
Sbjct: 1   MSQSTPERGGSTSISGGGSVLATPRRAAATLLVSLSTLVALCAKQANRASKKLQIKLKSK 60

Query: 61  QLPRLE-----VRPKSFMKSISSTAMTLITKKKNH--GGAEIKDEWGDDGVWRKTILMGD 120
           QLPRLE     +RPK F+K+IS+TA+TLI KKKN   GG + ++EWGD GVW+K ILMGD
Sbjct: 61  QLPRLELRSPQLRPKRFLKNISNTAITLIHKKKNKRGGGGDAEEEWGDGGVWQKAILMGD 120

Query: 121 KCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLAT 145
           KCEPLDFSGVIYYDSNGKQLNEVP RSPRASPLPA LAT
Sbjct: 121 KCEPLDFSGVIYYDSNGKQLNEVPLRSPRASPLPAFLAT 159

[Close]

BLAST of Sed0021519.1 vs. ExPASy TrEMBL
Match: A0A1S3C2V4 (uncharacterized protein LOC103496246 OS=Cucumis melo OX=3656 GN=LOC103496246 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.9e-52
Identity = 119/159 (74.84%), Postives = 130/159 (81.76%), Query Frame = 0


Query: 1   MGLNTPER--------GSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLK 60
           M  +TPER        G SVLA+PRRAAATLLVSLSTLVALCAKQANRASKKLQ KLK K
Sbjct: 1   MSQSTPERGGSTSISGGGSVLATPRRAAATLLVSLSTLVALCAKQANRASKKLQIKLKSK 60

Query: 61  QLPRLE-----VRPKSFMKSISSTAMTLITKKKNH--GGAEIKDEWGDDGVWRKTILMGD 120
           QLPRLE     +RPK F+K+IS+TA+TLI KKKN   GG + ++EWGD GVW+K ILMGD
Sbjct: 61  QLPRLELRSPQLRPKRFLKNISNTAITLIHKKKNKRGGGGDAEEEWGDGGVWQKAILMGD 120

Query: 121 KCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLAT 145
           KCEPLDFSGVIYYDSNGKQLNEVP RSPRASPLPA LAT
Sbjct: 121 KCEPLDFSGVIYYDSNGKQLNEVPLRSPRASPLPAFLAT 159

[Close]

BLAST of Sed0021519.1 vs. ExPASy TrEMBL
Match: A0A6J1C6P8 (uncharacterized protein LOC111008895 OS=Momordica charantia OX=3673 GN=LOC111008895 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.9e-51
Identity = 115/159 (72.33%), Postives = 127/159 (79.87%), Query Frame = 0


Query: 1   MGLNTPERG------SSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQL 60
           MG  TPERG       SVLASP+RAAATLL+SLSTLVALCAK+ANR SKKLQTKLK KQ 
Sbjct: 1   MGHATPERGGSGSGSGSVLASPKRAAATLLISLSTLVALCAKEANRVSKKLQTKLKSKQF 60

Query: 61  PRLE-----VRPKSFMKSISSTAMTLITKKKN----HGGAEIKDEWGDDGVWRKTILMGD 120
           PRLE     VRPK F+KSIS TA+TL+ K KN     GG + +DEWGD G+W+K ILMGD
Sbjct: 61  PRLELRSPQVRPKRFLKSISDTAITLMQKNKNKKTKRGGCDAEDEWGDGGIWQKAILMGD 120

Query: 121 KCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLAT 145
           KCEPL+FSGVIYYDS GKQLNEVPPRSPRASPLP+ LAT
Sbjct: 121 KCEPLNFSGVIYYDSKGKQLNEVPPRSPRASPLPSYLAT 159

[Close]

BLAST of Sed0021519.1 vs. ExPASy TrEMBL
Match: A0A6J1KMI5 (uncharacterized protein LOC111495524 OS=Cucurbita maxima OX=3661 GN=LOC111495524 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.4e-49
Identity = 112/144 (77.78%), Postives = 121/144 (84.03%), Query Frame = 0


Query: 9   GSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-----VRPKS 68
           G SVLASPRRAAATLLVSLSTLVALCAK ANRASKKLQTKLK KQLPRLE     V PK 
Sbjct: 17  GGSVLASPRRAAATLLVSLSTLVALCAKHANRASKKLQTKLKSKQLPRLELLSSQVCPKR 76

Query: 69  FMKSISSTAMTLITKKK---NHGGAEIKDEWGDDGVWRKTILMGDKCEPLDFSGVIYYDS 128
            +KSIS+TA+TLI KKK    HG  + ++EWGD GVW+K I+MGDKCEPL+FSGVIYYDS
Sbjct: 77  LLKSISNTAITLIHKKKKKNKHGSGDTEEEWGDGGVWQKAIMMGDKCEPLNFSGVIYYDS 136

Query: 129 NGKQLNEVPPRSPRASPLPALLAT 145
           NGKQLNEVP RSPRASPLPA LAT
Sbjct: 137 NGKQLNEVPLRSPRASPLPAFLAT 160

[Close]

BLAST of Sed0021519.1 vs. ExPASy TrEMBL
Match: A0A6J1EAJ9 (uncharacterized protein LOC111431388 OS=Cucurbita moschata OX=3662 GN=LOC111431388 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.8e-49
Identity = 113/150 (75.33%), Postives = 123/150 (82.00%), Query Frame = 0


Query: 2   GLNTPERGSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE--- 61
           G  +   G SVLASPRRAAATLLVSLSTLVALCAK ANRASKKLQTKLK KQLPRLE   
Sbjct: 10  GSTSMSDGGSVLASPRRAAATLLVSLSTLVALCAKHANRASKKLQTKLKSKQLPRLELLS 69

Query: 62  --VRPKSFMKSISSTAMTLITKKKNH--GGAEIKDEWGDDGVWRKTILMGDKCEPLDFSG 121
             V PK  +KSIS+TA+TLI KKK +  GG +  +EWGD GVW+K I+MGDKCEPL+FSG
Sbjct: 70  SQVCPKRLLKSISNTAITLIHKKKKNKQGGGDAGEEWGDGGVWQKAIMMGDKCEPLNFSG 129

Query: 122 VIYYDSNGKQLNEVPPRSPRASPLPALLAT 145
           VIYYDSNGKQLNEVP RSPRASPLPA LAT
Sbjct: 130 VIYYDSNGKQLNEVPLRSPRASPLPAFLAT 159

[Close]

BLAST of Sed0021519.1 vs. TAIR 10
Match: AT1G49000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18560.1); Has 105 Blast hits to 105 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 109.8 bits (273), Expect = 2.0e-24
Identity = 69/157 (43.95%), Postives = 93/157 (59.24%), Query Frame = 0


Query: 1   MGLNTPERGSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-- 60
           M  +TPE  SS   S +R + + LVS   ++ LCA+ ANR SKKL+ K K +     E  
Sbjct: 1   MDRSTPEHNSS--PSHKRLSVSFLVS---MMVLCARHANRLSKKLKLKSKKRTCSGGEGG 60

Query: 61  ---------------VRPKSFMKSISSTAMTLITKKKNHGGAEIKDEWGDDGVWRKTILM 120
                           RPK    ++S+ AMT++ ++KN    +      + G+W++ ILM
Sbjct: 61  GERFRWNMISSSMSSPRPKELFTTLSNKAMTMV-RRKNPPEEKATAMEEEHGLWQREILM 120

Query: 121 GDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPA 141
           G KCEPLDFSGVIYYDSNG+ LNEVPPRSPR +PLP+
Sbjct: 121 GGKCEPLDFSGVIYYDSNGRLLNEVPPRSPRGTPLPS 151

[Close]

BLAST of Sed0021519.1 vs. TAIR 10
Match: AT3G18560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49000.1); Has 95 Blast hits to 95 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 96.7 bits (239), Expect = 1.7e-20
Identity = 71/191 (37.17%), Postives = 98/191 (51.31%), Query Frame = 0


Query: 1   MGLNTPERGSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQ------- 60
           M  +TPE  SS   + +R + + LVS   L+ LCA+ A+R SKKL+ K   KQ       
Sbjct: 1   MERSTPEHVSS---AHKRISVSFLVS---LMVLCARHASRVSKKLKPKKTRKQTHLEDYL 60

Query: 61  --------------------------LPRLEVRPKSFMKSISSTAMTLITKK-KNHGGAE 120
                                        + VRPK    ++S+ AMT++ +K K + G  
Sbjct: 61  ESPKSNGNGSEDGRGGGRFGWSPARTFSPMRVRPKELYTTLSNKAMTMVGRKNKAYDGGP 120

Query: 121 IK---------DEWGDDGVWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASP 149
            K         ++  + GVW++ ILMG KCEPLD+SGVIYYD +G QL +VPPRSPRAS 
Sbjct: 121 TKKTAVEMVMEEDEEEYGVWQREILMGGKCEPLDYSGVIYYDCSGHQLKQVPPRSPRASL 180

[Close]

BLAST of Sed0021519.1 vs. TAIR 10
Match: AT1G71740.1 (unknown protein; Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 5.9e-05
Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = 0


Query: 96  VWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPL 139
           +W+K ILMG KC+  DFSGVI YD++G    +V P +  + PL
Sbjct: 88  LWQKNILMGGKCQLPDFSGVILYDADG----QVVPPAKNSLPL 126

The following BLAST results are available for this feature:

BLAST of Sed0021519.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894891.1	8.4e-54	74.23	uncharacterized protein LOC120083287 [Benincasa hispida]	[more]
XP_008456286.1	6.0e-52	74.84	PREDICTED: uncharacterized protein LOC103496246 [Cucumis melo] >TYJ98977.1 uncha...	[more]
XP_022137455.1	3.9e-51	72.33	uncharacterized protein LOC111008895 [Momordica charantia]	[more]
XP_023519722.1	2.8e-49	75.33	uncharacterized protein LOC111783076 [Cucurbita pepo subsp. pepo]	[more]
XP_023001364.1	2.8e-49	77.78	uncharacterized protein LOC111495524 [Cucurbita maxima]	[more]

BLAST of Sed0021519.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0021519.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BIM5	2.9e-52	74.84	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C2V4	2.9e-52	74.84	uncharacterized protein LOC103496246 OS=Cucumis melo OX=3656 GN=LOC103496246 PE=...	[more]
A0A6J1C6P8	1.9e-51	72.33	uncharacterized protein LOC111008895 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A6J1KMI5	1.4e-49	77.78	uncharacterized protein LOC111495524 OS=Cucurbita maxima OX=3661 GN=LOC111495524...	[more]
A0A6J1EAJ9	1.8e-49	75.33	uncharacterized protein LOC111431388 OS=Cucurbita moschata OX=3662 GN=LOC1114313...	[more]

BLAST of Sed0021519.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49000.1	2.0e-24	43.95	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G18560.1	1.7e-20	37.17	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G71740.1	5.9e-05	48.84	unknown protein; Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33237	F2P16.13 PROTEIN-RELATED	coord: 16..141
None	No IPR available	PANTHER	PTHR33237:SF26	OS06G0499100 PROTEIN	coord: 16..141

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0021519	Sed0021519	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0021519.1-exon	Sed0021519.1-exon-LG01:12369361..12370225	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0021519.1-three_prime_utr	Sed0021519.1-three_prime_utr-LG01:12369361..12369725	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0021519.1-cds	Sed0021519.1-cds-LG01:12369726..12370175	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0021519.1-five_prime_utr	Sed0021519.1-five_prime_utr-LG01:12370176..12370225	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0021519.1	Sed0021519.1-protein	polypeptide