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Sed0021011.2 (mRNA) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAACTTTTAAGTTAATCCCTACATTCTTCATTTCATTGGTTTCATCGACCTTCCTCTTCCACTCGTCACCTGCAATAACAACTGTTCTTCCCTTCATTCTTCCATTGACGGATTCTCCAAAGCTCCCTTTCACTTTTCCCATTTCTTCAATCGCTTCAATTCCATCAGATTCAGACCCAAATCCCCAACAATGGCTTCCTCGCTCGCTTCTCCTTCAACGCCTTCCGCAGTGGCGGCCAAGCTCCCCTGCGCTTCTCCGCCTCGCCGCCACGCCTCTCGTTCTTCGCTCTCCTTTCGCCTCTCCCCCAAGCCCAAGCTACGAATCTTCATCAGGGTATGCGCCGATTCATTTGCTTCTAGGATTTCTGTCGATTTTGGTCTTGTTTTGTGTTGGGTTTCTGATTTTTCACTGTCCTGTTCTGTGGATTTTGTGGGTTGGCTTTGAATTTGTTGGTGGGTTCATGTGTATTAATGGGTGCTTGTTGGTTTCTTGATTGGAAAGGGAAATTGGAAGTCTGTGTGCTTGGATGACCAAATTAGGTCTTTCCACTGGAATTTTTGGACTTTTTTATTGCAATTTAGAAGTTTGGAAGGGATTTATTAGAGTGAAAGAGACTTTCTGTGTGAATTGGGGAGTAATAGCACATAGTTATGGAGGTTAAGTTATTGGAAATTAACCATCATGGAGCGGCATAGTGGTCTGAGAGTGTCGTAAGTAACTAATGGATTTCTGTCGATTTTGGTCTTGTTCTGTGTTGGGTTTCTGATTTATGACTGTTCTGTTATGTGGATTTTTTGGGTTGGTTTTGAATTTGTTTGTGGGGTAATGTGTACTAATGGGTGCTTTTTGGTATCGTGATTGGTAAGGGAAATTGGAAGTCTGTGTGCTCGGATGATTAAATTAGGTCTTTGGACTGGAATTCTTGGACTTTTTATTGCAATGCAATATAGAAGTTTGAAAGGGATTTAAAAGAGTGTAAGAGACACATAGATTGTAGTGTAAATTGGTTACAAACAGCACAAGTTAATGGAAATTCACCTTCATGGACCGCCTAGTGATCAAGAGTGCATAAGTAACTAAGAGATGATGCGTTCAATCCATGATCGACACCTATTTATAAGTTAATTTTCTTGACATACAAATGTTGTAGAGTCACGTGGGATTTCACCGAGTTGCATGTAAATTGGCCAGGACAGCTTCCAAGTTCCAAGAAGGTGTCTTCATTAGTTATATGAGCTGGAATGGTACTTGTGTTAAGGGAATGAAACTTTTGGATAGCCATTAAAAGTATATAACTAGTTAACAAGCATGTATCTGATAACTGATAAGTTAACAAGTAGCTCTGACTTCTCAGTATTTTGTACTTTCTTTCCCCAAATTTCCATGGTCCACTGAAGTTTAGTTATCCCTATCTATTGTACATAAGGATGCGTTTGGGGGGGTGGGATTATTATAAACAATGAGTTATTATAATAGGGGAAATTATAATTGCCTACATTGAAGAAGCATGTTTTAAATAGAAACTATGATGGTCCCCAAGGGGTGGCAAAGTGGTTGAAGACTTGGGCTTTGAGGGTATGCTCCCTCCCCTCAAGGTCCTAGGTTCGAGACTCAGCTGTGACATTACTCCTTTGATGTCTCTCGGTGCCTGGCCTAGGGACGAGCGTGGTTACCCTTTTTTCAAAAAAAAAAATAGAAATTATGATGGTCTGCGTTTCAGGTGCAAGTTATTCTATCATGAGATTATTATAGTACAAAGTTTTACTATAACATGAGTTATTATAACTGAATTTGAGAATTATTTGAGCTAACTCAACATTTATTATAATCAGTGGCTCAAACACTAACCCACCCTTAAACAATAGCCCAAACCCCATAAGGGTTCAGATATCCATCTTAGGAATTCTGCTAATGATTGTATAGAACTTTACCGCTTCAGATGAAACTCTATTTTCCATGCTATGTTGTTAACTCGATCATGATTGAAGCATGTAACACTAATATAAGCGTTTTGTTGCAGGCTGTGCAGCCTGTTCGTAAGAATTCGACTCTCGTACAAGCACAATTGAACGAGGTACATATTCTTACTTCGAACTTTTTATTGTAAGTGGAATTATTGTGGTGAAGTATTCACCCCTTCCTAACTTATTGTCCTTGAAGACGTCTGTTTTATTGAAGGATACTGTTGATGTATCAACTGCTGCAAAAGCTTCATCTGAATCTGATGCATTAGCTTCAGATGGAAGTGCTAAATTATTGAGTGATCAATCTTCCAAAACTTTGGCAACCGAAGAATCGATCTCTGAGTTCATTGCTCAAGTTTCAAGCCTTGTCAAGTTAGCTAGCTCCATCTATGAACTTTTCCTAAACTCTAGATGGCTGTGGTATAACATTTTTCTCTCTGCTTGCAGACTTGTTGATTCAAGGGATATTGTAGAGCTGCAATTGAAACAGCTCGACTGTGAAGTCGTAATCCGAAAAAAGGAGGCCTTGCCCCAACCACCGCCTCCGGCTGCTTTACCTATGATGTGGTCACCCCCATCTGCAGTAGCACCACCAGCGCCTGCCCCTGTGCCTGCAGCACTACCAGCGCCTGCTTCTCCGGTTGCAAGCCCGCCGTCTTCACCTCTTGCTGCCAAGTCGACTGCGTCTTCTCTTCCACCTCTCAAATGTCCAATGGCAGGCACGTTCTACCGTAGTCCGGGACCTGGAGAACCACCATTTGTGAAGGTAAATTTCTTTAGTAAATAGTATTTCATAAATGAATTCATTGGAGTGGCTCTGCTGCAACTCTTTATTTGATAGTAAATCTATTTTTGGCGCTTATTTAAGGATTTCTTCCTTTAGGTTGGAGATAAAGTACAGAAGGGACAAATCATATGCATCATAGAGGCCATGAAATTAATGAACGAAATCGAAGTAAGATTTTCTCCGTTTTATTTGCTAACAGTATATTCAATACATCTATAGTTTGTCTGTTGATGCGGGAGTATTACTTAAAATAATTTTTGAATCACATGAATTGAAAATTTTACACAGACTGTTTATAGCCTGATGATGGATGAAGCAGCCATTGTTTCTCCTCTGTAGTAGACATTCGCCTCTTTTGTTATGTTTGATGTGACTGAATATTAGGAAAAATGGAGCAATAATTCCATTGATATATAGCCAGTATAGGCCACCTGCATAGGAATCCTACCTATTTTCGGACAACAAATATAGTAGAATGAGGGGATTATCTCATGAGATTAGTTAAGGAACATACAAGCTAACTCGAGTACTCACGGATATTAAAAAAGATTCATTAGTTACAAGTTAACCTTCGTACAAACAATGTATTAAGAGAACAATTAGATCTGACTTATACATTATGTTCTTACTCTTCCATGAGAATGATAGAATCTGAACTTTATTACGAAATAAAAGAACACCGAAATACTAGATAAACCAAACTTTAGTGGAATTTGGACCTTCCCATCTTGAGTATTCTATTCTCATGTCCTAAACAACATACTGAATATTTTCATACCTTTCTCATTCACCCACTCCGAAATCTCTAAAAAAAACTTAGTAATTATTTACTATTGGATCCCATCGGAGTACAATTTTACCTCTAGAGGATATATATATATATGTATGTATGTCAATAGTAAATCCTCTATTAGTCCTGCCTAAATGTCTTATGGTAGGAATGTTCTATCGTATTTCAAGACTTTGATAACCATCCTTCACAAGTTATTCTGAACACTCACGGATATAAAAGAATAAAATGTAGTGAGACGGGACAAAACAATGTAACGTGGTGCGGTTGATTTTGGATCATAAAAATATAGTTGACAACACCATTTTTATTTTTATACATAACATCAGTCAACTGTGATCTCCATGCATAATGCTCGTGGCCAGCTTCCCAGATCACTAGTTTCAGTCAACATTGGCCAACCTCTGCTCCGAAAACATTTTCATCGATAAAAATGAAAGTTTTATAGGGGGGTTGTAGGTTCTGAGTCTTTTTTACGATGAGATTATACTCTAAGAAATTAAAGTGCTCACACCTCTGCTCTCTTAAAACTTCTAATTTTCAGGCCGATCAATCCGGGACAATAGTCGAGATTATTGCAGAGGATGCAAAGCCCGTCAGCGTCGACACTGTAAGTAGTTCCAACCATTAAAGATATTGCAATGAATAGCTGAACTCTTCACATTATTGTTTCATCAAGATGTTTATGGAGTTTGAATTTTTTTTTTTTTTTTTTTTTTTTCTTTGCAGCCTTTGTTTGTCATTCAACCGTAGACGAATCCTGTTTTGTTCACACGAGCCAAGTTAAGCAGATGAGATTAAGCTGAGTTTGGGAAGCTAATTCAGTTTCCAAGCAAATTCAGGATGTGGATTAGTTATGGTACTGTCTTTTTTTTTTCTTACCCTCTTTAGTTGAGTGAAGTCAGAGAGAGATTAAGATTGTGTTGATAATTGTCAATTGTTCTTTTCCAGTTTTAGCGGGAACTTTCAACTTTAGTTGTGAAATCAGTTGATGTTGGCTATTATAATAAACTTCTTTTTTTTTTTACTGATGGGTGATTTAATATGATTCGGTTCAATTCA AAAACTTTTAAGTTAATCCCTACATTCTTCATTTCATTGGTTTCATCGACCTTCCTCTTCCACTCGTCACCTGCAATAACAACTGTTCTTCCCTTCATTCTTCCATTGACGGATTCTCCAAAGCTCCCTTTCACTTTTCCCATTTCTTCAATCGCTTCAATTCCATCAGATTCAGACCCAAATCCCCAACAATGGCTTCCTCGCTCGCTTCTCCTTCAACGCCTTCCGCAGTGGCGGCCAAGCTCCCCTGCGCTTCTCCGCCTCGCCGCCACGCCTCTCGTTCTTCGCTCTCCTTTCGCCTCTCCCCCAAGCCCAAGCTACGAATCTTCATCAGGGCTGTGCAGCCTGTTCGTAAGAATTCGACTCTCGTACAAGCACAATTGAACGAGACGTCTGTTTTATTGAAGGATACTGTTGATGTATCAACTGCTGCAAAAGCTTCATCTGAATCTGATGCATTAGCTTCAGATGGAAGTGCTAAATTATTGAGTGATCAATCTTCCAAAACTTTGGCAACCGAAGAATCGATCTCTGAGTTCATTGCTCAAGTTTCAAGCCTTGTCAAACTTGTTGATTCAAGGGATATTGTAGAGCTGCAATTGAAACAGCTCGACTGTGAAGTCGTAATCCGAAAAAAGGAGGCCTTGCCCCAACCACCGCCTCCGGCTGCTTTACCTATGATGTGGTCACCCCCATCTGCAGTAGCACCACCAGCGCCTGCCCCTGTGCCTGCAGCACTACCAGCGCCTGCTTCTCCGGTTGCAAGCCCGCCGTCTTCACCTCTTGCTGCCAAGTCGACTGCGTCTTCTCTTCCACCTCTCAAATGTCCAATGGCAGGCACGTTCTACCGTAGTCCGGGACCTGGAGAACCACCATTTGTGAAGGTTGGAGATAAAGTACAGAAGGGACAAATCATATGCATCATAGAGGCCATGAAATTAATGAACGAAATCGAAGCCGATCAATCCGGGACAATAGTCGAGATTATTGCAGAGGATGCAAAGCCCGTCAGCGTCGACACTCCTTTGTTTGTCATTCAACCGTAGACGAATCCTGTTTTGTTCACACGAGCCAAGTTAAGCAGATGAGATTAAGCTGAGTTTGGGAAGCTAATTCAGTTTCCAAGCAAATTCAGGATGTGGATTAGTTATGGTACTGTCTTTTTTTTTTCTTACCCTCTTTAGTTGAGTGAAGTCAGAGAGAGATTAAGATTGTGTTGATAATTGTCAATTGTTCTTTTCCAGTTTTAGCGGGAACTTTCAACTTTAGTTGTGAAATCAGTTGATGTTGGCTATTATAATAAACTTCTTTTTTTTTTTACTGATGGGTGATTTAATATGATTCGGTTCAATTCA ATGGCTTCCTCGCTCGCTTCTCCTTCAACGCCTTCCGCAGTGGCGGCCAAGCTCCCCTGCGCTTCTCCGCCTCGCCGCCACGCCTCTCGTTCTTCGCTCTCCTTTCGCCTCTCCCCCAAGCCCAAGCTACGAATCTTCATCAGGGCTGTGCAGCCTGTTCGTAAGAATTCGACTCTCGTACAAGCACAATTGAACGAGACGTCTGTTTTATTGAAGGATACTGTTGATGTATCAACTGCTGCAAAAGCTTCATCTGAATCTGATGCATTAGCTTCAGATGGAAGTGCTAAATTATTGAGTGATCAATCTTCCAAAACTTTGGCAACCGAAGAATCGATCTCTGAGTTCATTGCTCAAGTTTCAAGCCTTGTCAAACTTGTTGATTCAAGGGATATTGTAGAGCTGCAATTGAAACAGCTCGACTGTGAAGTCGTAATCCGAAAAAAGGAGGCCTTGCCCCAACCACCGCCTCCGGCTGCTTTACCTATGATGTGGTCACCCCCATCTGCAGTAGCACCACCAGCGCCTGCCCCTGTGCCTGCAGCACTACCAGCGCCTGCTTCTCCGGTTGCAAGCCCGCCGTCTTCACCTCTTGCTGCCAAGTCGACTGCGTCTTCTCTTCCACCTCTCAAATGTCCAATGGCAGGCACGTTCTACCGTAGTCCGGGACCTGGAGAACCACCATTTGTGAAGGTTGGAGATAAAGTACAGAAGGGACAAATCATATGCATCATAGAGGCCATGAAATTAATGAACGAAATCGAAGCCGATCAATCCGGGACAATAGTCGAGATTATTGCAGAGGATGCAAAGCCCGTCAGCGTCGACACTCCTTTGTTTGTCATTCAACCGTAG MASSLASPSTPSAVAAKLPCASPPRRHASRSSLSFRLSPKPKLRIFIRAVQPVRKNSTLVQAQLNETSVLLKDTVDVSTAAKASSESDALASDGSAKLLSDQSSKTLATEESISEFIAQVSSLVKLVDSRDIVELQLKQLDCEVVIRKKEALPQPPPPAALPMMWSPPSAVAPPAPAPVPAALPAPASPVASPPSSPLAAKSTASSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQIICIIEAMKLMNEIEADQSGTIVEIIAEDAKPVSVDTPLFVIQP Homology
BLAST of Sed0021011.2 vs. NCBI nr
Match: XP_038891208.1 (biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic-like isoform X1 [Benincasa hispida]) HSP 1 Score: 387.1 bits (993), Expect = 1.3e-103 Identity = 233/288 (80.90%), Postives = 248/288 (86.11%), Query Frame = 0
BLAST of Sed0021011.2 vs. NCBI nr
Match: KAG6599342.1 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 379.4 bits (973), Expect = 2.7e-101 Identity = 227/288 (78.82%), Postives = 243/288 (84.38%), Query Frame = 0
BLAST of Sed0021011.2 vs. NCBI nr
Match: XP_022946679.1 (biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 376.3 bits (965), Expect = 2.3e-100 Identity = 225/288 (78.12%), Postives = 242/288 (84.03%), Query Frame = 0
BLAST of Sed0021011.2 vs. NCBI nr
Match: XP_038891209.1 (biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic-like isoform X2 [Benincasa hispida]) HSP 1 Score: 375.2 bits (962), Expect = 5.1e-100 Identity = 229/288 (79.51%), Postives = 243/288 (84.38%), Query Frame = 0
BLAST of Sed0021011.2 vs. NCBI nr
Match: XP_023547168.1 (biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 372.5 bits (955), Expect = 3.3e-99 Identity = 225/288 (78.12%), Postives = 240/288 (83.33%), Query Frame = 0
BLAST of Sed0021011.2 vs. ExPASy Swiss-Prot
Match: Q42533 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BCCP1 PE=1 SV=2) HSP 1 Score: 235.3 bits (599), Expect = 8.3e-61 Identity = 165/291 (56.70%), Postives = 200/291 (68.73%), Query Frame = 0
BLAST of Sed0021011.2 vs. ExPASy Swiss-Prot
Match: Q42783 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic OS=Glycine max OX=3847 GN=ACCB-1 PE=1 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 1.2e-59 Identity = 166/286 (58.04%), Postives = 195/286 (68.18%), Query Frame = 0
BLAST of Sed0021011.2 vs. ExPASy Swiss-Prot
Match: Q9LLC1 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BCCP2 PE=1 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 3.6e-48 Identity = 125/217 (57.60%), Postives = 154/217 (70.97%), Query Frame = 0
BLAST of Sed0021011.2 vs. ExPASy Swiss-Prot
Match: Q06881 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=accB PE=1 SV=2) HSP 1 Score: 93.6 bits (231), Expect = 3.9e-18 Identity = 71/176 (40.34%), Postives = 100/176 (56.82%), Query Frame = 0
BLAST of Sed0021011.2 vs. ExPASy Swiss-Prot
Match: P37799 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=accB PE=3 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 6.9e-15 Identity = 65/166 (39.16%), Postives = 90/166 (54.22%), Query Frame = 0
BLAST of Sed0021011.2 vs. ExPASy TrEMBL
Match: A0A6J1G4I9 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucurbita moschata OX=3662 GN=LOC111450672 PE=4 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 1.1e-100 Identity = 225/288 (78.12%), Postives = 242/288 (84.03%), Query Frame = 0
BLAST of Sed0021011.2 vs. ExPASy TrEMBL
Match: A0A5A7VAX5 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G00740 PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 2.1e-99 Identity = 225/287 (78.40%), Postives = 240/287 (83.62%), Query Frame = 0
BLAST of Sed0021011.2 vs. ExPASy TrEMBL
Match: A0A1S3C4K6 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucumis melo OX=3656 GN=LOC103496408 PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 2.1e-99 Identity = 225/287 (78.40%), Postives = 240/287 (83.62%), Query Frame = 0
BLAST of Sed0021011.2 vs. ExPASy TrEMBL
Match: A0A0A0LFE8 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucumis sativus OX=3659 GN=Csa_2G009520 PE=4 SV=1) HSP 1 Score: 369.4 bits (947), Expect = 1.4e-98 Identity = 220/283 (77.74%), Postives = 239/283 (84.45%), Query Frame = 0
BLAST of Sed0021011.2 vs. ExPASy TrEMBL
Match: A0A6J1KC47 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucurbita maxima OX=3661 GN=LOC111493574 PE=4 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 5.1e-98 Identity = 224/288 (77.78%), Postives = 241/288 (83.68%), Query Frame = 0
BLAST of Sed0021011.2 vs. TAIR 10
Match: AT5G16390.1 (chloroplastic acetylcoenzyme A carboxylase 1 ) HSP 1 Score: 235.3 bits (599), Expect = 5.9e-62 Identity = 165/291 (56.70%), Postives = 200/291 (68.73%), Query Frame = 0
BLAST of Sed0021011.2 vs. TAIR 10
Match: AT5G15530.1 (biotin carboxyl carrier protein 2 ) HSP 1 Score: 193.4 bits (490), Expect = 2.6e-49 Identity = 125/217 (57.60%), Postives = 154/217 (70.97%), Query Frame = 0
BLAST of Sed0021011.2 vs. TAIR 10
Match: AT5G16390.2 (chloroplastic acetylcoenzyme A carboxylase 1 ) HSP 1 Score: 191.8 bits (486), Expect = 7.4e-49 Identity = 145/262 (55.34%), Postives = 173/262 (66.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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