Sed0019817.1 (mRNA) Chayote v1

Overview


Name	Sed0019817.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	RING-type E3 ubiquitin transferase
Location	LG05: 38597749 .. 38599570 (+)
Sequence length	732
RNA-Seq Expression	Sed0019817.1
Synteny	Sed0019817.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGTCATATTCACCGATCCCCAAGTTCTGGATTGCCACATTTGTTGCAAACCCTTGTACGTTCCGGTCTACCAGGTTCGATCAAGCGTTTTCTCCTTCTATTTTGCTTCCCATTATCGTTCTTGTTCATTTCTTGTGCTTGTTTGTTGGATTTGATGCTTCTGAAATTCCCCTTTCTATTAGGTTTTTATGCGTTTTTTCTCTGTTTGAAGTCTGTTGTCTTGGTTGTGGATTGCAGTGGAACTTATGGATTGTTAATGTCTTCGTTATGAACTGTTATTGCAGCTAGGATGTTATGGAGTTGTTAACCATAGAATTGAAGTTCTTACGGGTATGTTTGGAGCACCGGATTGATTATGATAGATGGAAGGTTATAATAAATAGTAGGTTATTATAAATGGTGTTTGAAGGGCAAATTATTATAATATAGATTACGATAAACGGTATTTGAGAGACCGGTTATGTAACAAAAAGTAATGTATGTAAGGTTTAGATAAACGGACATGCAATTTTAGGTAAACATCGATTGGGTTATTATGACCAACCCGCCCGTTTACATAAACGGGGACCCAAACACACCTTAAATGTTTTGACTTAAATTATCTTAGAAATGGAGATTATTATGGATATTGTGTGGACAGAGTCAAGACATGGCTGGAATTGAAATGAAACTTTGACCTCAATTACTTTTCGTGCGACATTATTTGAGTAAACGTTAGAATTGTTAGGATTGTGGATTACTCCTATCATTACCAATTGGTTTTGAGATGGATATTCACGTATCGTAGCCTATTAAGCCTAAATGGGGTATTCGGTCCAACAAAATAAAATTGATATTCGATTTATAAGATAGATGAAACACAAAGGAGGCATCACTTGAAGGAGCATGTTAGAATCTCACAATTAGGTGGACTACTCCTCTCATCAACAATTAGTTTTGAGATGAATGTTCACGATATTTGATATTTTCTTCACCTTTCCAATTGTGTTGATTATGAGATTTAATTCAATGTTTAGAGTATACATGGAACTTAAAAGTGATGAGCATAAAAGAAAATGAAGCTTGCATTTGGGGACATAATTATTAATGTCTTGTCTTTTTATGAGTCAATTTTATTTCATACCATCCGCTTTGATGTTGGGATGTTGGTGTTTGATAAATTAGTGTGAGAATGGGCACATTTCTTGCTGTAGTTGTTGCACCAAAGTTCAGAATAAATGCCCTAGCTGCGGCCCGGCAAAAGGCTTCATACGTTGCATAGCGATTGAGAAAGTCTTGGAATCGATCAAGATACCGTGCAAAAACTTGATATATGGATGCAATGAGACTATGAATTTGAACCAGATAAATAACCACGAGTCATTGTGTGCACATAAATCCTGTTTGTGCCCTTTACCTGATTGCTCGTACGTTGGTTCCGTCAAGCAGTTGAGCTCACACTTCAGAGAAAAGCACAAAGTCTTGGTCAAAAGCTTCTCATACAATTCAAGGTTTACTATATGCGTGAATATTGATGAAAGATATTGTATATTTCAAGCAGAGAATGATGGAGTTTTGTTCTTTCTCTCTTACTCGTTTGAAATTTTTGGGATTGCGGTAACCATGAGTCGGATTGGATCTTCGTCATCTGAGAGAAAGTTGTGTTATGAAATTAGAGTGAAAACGCAGGGATGTGTTCTATCTTTGCAATCAGTAGCAAATGAGATCCAAGGTCGGAGTGAAGTTCCTCCTTCCAATAAATCGCTTTTGATTCTGAATGAGTATTTCAGATCTTCTTCTCTGAAGATTTTGGATTTTCGCATTTGGCTCGCACTCTAA

mRNA sequence

ATGAACGTCATATTCACCGATCCCCAAGTTCTGGATTGCCACATTTGTTGCAAACCCTTGTACGTTCCGGTCTACCAGTGTGAGAATGGGCACATTTCTTGCTGTAGTTGTTGCACCAAAGTTCAGAATAAATGCCCTAGCTGCGGCCCGGCAAAAGGCTTCATACGTTGCATAGCGATTGAGAAAGTCTTGGAATCGATCAAGATACCGTGCAAAAACTTGATATATGGATGCAATGAGACTATGAATTTGAACCAGATAAATAACCACGAGTCATTGTGTGCACATAAATCCTGTTTGTGCCCTTTACCTGATTGCTCGTACGTTGGTTCCGTCAAGCAGTTGAGCTCACACTTCAGAGAAAAGCACAAAGTCTTGGTCAAAAGCTTCTCATACAATTCAAGGTTTACTATATGCGTGAATATTGATGAAAGATATTGTATATTTCAAGCAGAGAATGATGGAGTTTTGTTCTTTCTCTCTTACTCGTTTGAAATTTTTGGGATTGCGGTAACCATGAGTCGGATTGGATCTTCGTCATCTGAGAGAAAGTTGTGTTATGAAATTAGAGTGAAAACGCAGGGATGTGTTCTATCTTTGCAATCAGTAGCAAATGAGATCCAAGGTCGGAGTGAAGTTCCTCCTTCCAATAAATCGCTTTTGATTCTGAATGAGTATTTCAGATCTTCTTCTCTGAAGATTTTGGATTTTCGCATTTGGCTCGCACTCTAA

Coding sequence (CDS)

ATGAACGTCATATTCACCGATCCCCAAGTTCTGGATTGCCACATTTGTTGCAAACCCTTGTACGTTCCGGTCTACCAGTGTGAGAATGGGCACATTTCTTGCTGTAGTTGTTGCACCAAAGTTCAGAATAAATGCCCTAGCTGCGGCCCGGCAAAAGGCTTCATACGTTGCATAGCGATTGAGAAAGTCTTGGAATCGATCAAGATACCGTGCAAAAACTTGATATATGGATGCAATGAGACTATGAATTTGAACCAGATAAATAACCACGAGTCATTGTGTGCACATAAATCCTGTTTGTGCCCTTTACCTGATTGCTCGTACGTTGGTTCCGTCAAGCAGTTGAGCTCACACTTCAGAGAAAAGCACAAAGTCTTGGTCAAAAGCTTCTCATACAATTCAAGGTTTACTATATGCGTGAATATTGATGAAAGATATTGTATATTTCAAGCAGAGAATGATGGAGTTTTGTTCTTTCTCTCTTACTCGTTTGAAATTTTTGGGATTGCGGTAACCATGAGTCGGATTGGATCTTCGTCATCTGAGAGAAAGTTGTGTTATGAAATTAGAGTGAAAACGCAGGGATGTGTTCTATCTTTGCAATCAGTAGCAAATGAGATCCAAGGTCGGAGTGAAGTTCCTCCTTCCAATAAATCGCTTTTGATTCTGAATGAGTATTTCAGATCTTCTTCTCTGAAGATTTTGGATTTTCGCATTTGGCTCGCACTCTAA

Protein sequence

MNVIFTDPQVLDCHICCKPLYVPVYQCENGHISCCSCCTKVQNKCPSCGPAKGFIRCIAIEKVLESIKIPCKNLIYGCNETMNLNQINNHESLCAHKSCLCPLPDCSYVGSVKQLSSHFREKHKVLVKSFSYNSRFTICVNIDERYCIFQAENDGVLFFLSYSFEIFGIAVTMSRIGSSSSERKLCYEIRVKTQGCVLSLQSVANEIQGRSEVPPSNKSLLILNEYFRSSSLKILDFRIWLAL

Homology

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BLAST of Sed0019817.1 vs. NCBI nr
Match: XP_022143325.1 (E3 ubiquitin-protein ligase SINA-like 10 [Momordica charantia])

HSP 1 Score: 350.9 bits (899), Expect = 8.8e-93
Identity = 165/240 (68.75%), Postives = 196/240 (81.67%), Query Frame = 0


Query: 1   MNVIFTDPQVLDCHICCKPLYVPVYQCENGHISCCSCCTKVQNKCPSCGPAKGFIRCIAI 60
           MNVIF+DPQ+LDC+ICC+PL  PV+QCENGHI+C SCCTKVQNKCPSC  + G+IRC AI
Sbjct: 26  MNVIFSDPQLLDCYICCEPLSAPVFQCENGHIACSSCCTKVQNKCPSCSLSIGYIRCRAI 85

Query: 61  EKVLESIKIPCKNLIYGCNETMNLNQINNHESLCAHKSCLCPLPDCSYVGSVKQLSSHFR 120
           EKVLESIKIPC N IYGC  TM LN+ N+H SLC ++ C CP+ DC +VGS ++L SHF 
Sbjct: 86  EKVLESIKIPCHNSIYGCKMTMTLNERNDHGSLCTYEPCSCPVSDCLFVGSSEKLCSHFS 145

Query: 121 EKHKVLVKSFSYNSRFTICVNIDERYCIFQAENDGVLFFLSYSFEIFGIAVTMSRIGSSS 180
           +KHK   KSFSYNSRFT+C+N  + Y I QAE DG LFFLS++FEIFG AVT+SRIG SS
Sbjct: 146 KKHKNSAKSFSYNSRFTLCLNSGDSYRILQAEKDGALFFLSFTFEIFGNAVTVSRIGPSS 205

Query: 181 SERKLCYEIRVKTQGCVLSLQSVANEIQGRSEVPPSNKSLLILNEYFRSSSLKILDFRIW 240
           SE+K CYEI+ KTQG +L LQS+A EIQGR EVPPSN+SLLI NE+F SS+  IL+FRIW
Sbjct: 206 SEKKFCYEIKAKTQGSILCLQSIAKEIQGRVEVPPSNRSLLIPNEFFGSSAQTILEFRIW 265

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BLAST of Sed0019817.1 vs. NCBI nr
Match: KAG6606997.1 (E3 ubiquitin-protein ligase SINA-like 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 347.1 bits (889), Expect = 1.3e-91
Identity = 168/241 (69.71%), Postives = 195/241 (80.91%), Query Frame = 0


Query: 1   MNVIFTDPQVLDCHICCKPLYVPVYQCENGHISCCSCCTKVQNKCPSCGPAKGFIRCIAI 60
           M VI TDPQVLDC+ICC+PL VPVYQCENGHISC SCC+KVQNKCPSC  A G++RC AI
Sbjct: 27  MKVILTDPQVLDCYICCEPLSVPVYQCENGHISCSSCCSKVQNKCPSCSLAIGYMRCRAI 86

Query: 61  EKVLESIKIPCKNLIYGCNETMNLNQINNHESLCAHKSCLCPLPDCSYVGSVKQLSSHFR 120
           EKVLESIK+PC+N  YGC  T NLNQIN HE+LC ++ C CPL DCSYV S + LSSHFR
Sbjct: 87  EKVLESIKMPCQNSRYGCKTTTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEYLSSHFR 146

Query: 121 EKHKVLVKSFSYNSRFTICVNIDERYCIFQAENDGVLFFLSYSFEIFGIAVTMSRIGSSS 180
           ++H+   KS SYNSRFTIC+N D++YCIFQAENDGVLF LSYSFE FG AVT++RIG  S
Sbjct: 147 KRHQDSAKSISYNSRFTICLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLNRIGPRS 206

Query: 181 SERKLCYEIRVKTQGCVLSLQSVANEIQGRSEVPPSNKSLLILNEYFRSSSLK-ILDFRI 240
           SE+K CY+I+ K+QG VLSL SVA EIQ  +E PPS  SLLI NE+F SSS + IL+ RI
Sbjct: 207 SEKKFCYDIKAKSQGSVLSLLSVAKEIQRWTEDPPSKGSLLIPNEFFGSSSAQTILEIRI 266

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BLAST of Sed0019817.1 vs. NCBI nr
Match: XP_022949045.1 (uncharacterized protein LOC111452508 [Cucurbita moschata])

HSP 1 Score: 347.1 bits (889), Expect = 1.3e-91
Identity = 168/241 (69.71%), Postives = 195/241 (80.91%), Query Frame = 0


Query: 1   MNVIFTDPQVLDCHICCKPLYVPVYQCENGHISCCSCCTKVQNKCPSCGPAKGFIRCIAI 60
           M VI TDPQVLDC+ICC+PL VPVYQCENGHISC SCC+KVQNKCPSC  A G++RC AI
Sbjct: 297 MKVILTDPQVLDCYICCEPLSVPVYQCENGHISCSSCCSKVQNKCPSCSLAIGYMRCRAI 356

Query: 61  EKVLESIKIPCKNLIYGCNETMNLNQINNHESLCAHKSCLCPLPDCSYVGSVKQLSSHFR 120
           EKVLESIK+PC+N  YGC  T NLNQIN HE+LC ++ C CPL DCSYV S + LSSHFR
Sbjct: 357 EKVLESIKMPCQNSRYGCKTTTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEYLSSHFR 416

Query: 121 EKHKVLVKSFSYNSRFTICVNIDERYCIFQAENDGVLFFLSYSFEIFGIAVTMSRIGSSS 180
           ++H+   KS SYNSRFTIC+N D++YCIFQAENDGVLF LSYSFE FG AVT++RIG  S
Sbjct: 417 KRHQDSAKSISYNSRFTICLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLNRIGPRS 476

Query: 181 SERKLCYEIRVKTQGCVLSLQSVANEIQGRSEVPPSNKSLLILNEYFRSSSLK-ILDFRI 240
           SE+K CY+I+ K+QG VLSL SVA EIQ  +E PPS  SLLI NE+F SSS + IL+ RI
Sbjct: 477 SEKKFCYDIKAKSQGSVLSLLSVAKEIQRWTEDPPSKGSLLIPNEFFGSSSAQTILEIRI 536

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BLAST of Sed0019817.1 vs. NCBI nr
Match: XP_022997791.1 (E3 ubiquitin-protein ligase SINA-like 10 [Cucurbita maxima])

HSP 1 Score: 339.3 bits (869), Expect = 2.7e-89
Identity = 166/241 (68.88%), Postives = 191/241 (79.25%), Query Frame = 0


Query: 1   MNVIFTDPQVLDCHICCKPLYVPVYQCENGHISCCSCCTKVQNKCPSCGPAKGFIRCIAI 60
           M VIFTDPQ+LDC+ICC+PL VPVYQCENGHISC SCC+KV NKCPSC  A G+IRC AI
Sbjct: 27  MKVIFTDPQILDCYICCEPLSVPVYQCENGHISCSSCCSKVHNKCPSCSLAIGYIRCRAI 86

Query: 61  EKVLESIKIPCKNLIYGCNETMNLNQINNHESLCAHKSCLCPLPDCSYVGSVKQLSSHFR 120
           EKVLESIKIPC+N  YGC  TMNLNQIN HE+ C ++ C CP+ DCSYV S + L SHFR
Sbjct: 87  EKVLESIKIPCQNSKYGCKITMNLNQINEHETSCPYEPCSCPISDCSYVDSAEHLGSHFR 146

Query: 121 EKHKVLVKSFSYNSRFTICVNIDERYCIFQAENDGVLFFLSYSFEIFGIAVTMSRIGSSS 180
           ++H+   KSF YNSRFTIC+N  +RY IFQAEND  LF LSYSFEIFG AVT+SRIGS  
Sbjct: 147 KRHQDSAKSFLYNSRFTICLNSGDRYRIFQAENDDALFVLSYSFEIFGNAVTLSRIGSPL 206

Query: 181 SERKLCYEIRVKTQGCVLSLQSVANEIQGRSEVPPSNKSLLILNEYFRSSSLK-ILDFRI 240
           SE+K CY+I+ K+QG VLSLQSVA EIQ  +E PP   SLLI NE+F SSS + IL+ RI
Sbjct: 207 SEKKFCYDIKAKSQGSVLSLQSVAKEIQRWTEDPPFKGSLLIPNEFFGSSSAQTILEIRI 266

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BLAST of Sed0019817.1 vs. NCBI nr
Match: XP_004140738.2 (E3 ubiquitin-protein ligase SINA-like 10 [Cucumis sativus] >KGN57437.1 hypothetical protein Csa_011184 [Cucumis sativus])

HSP 1 Score: 339.3 bits (869), Expect = 2.7e-89
Identity = 161/242 (66.53%), Postives = 193/242 (79.75%), Query Frame = 0


Query: 1   MNVIFTDPQVLDCHICCKPLYVPVYQCENGHISCCSCCTKVQNKCPSCGPAKGFIRCIAI 60
           +NVIFTDPQ+LDC+ICC+PL +PV+QCENGHI+C SCCTK QNKCPSC  A G+IRC AI
Sbjct: 27  LNVIFTDPQILDCYICCEPLSIPVFQCENGHIACSSCCTKAQNKCPSCTLAIGYIRCRAI 86

Query: 61  EKVLESIKIPCKNLIYGCNETMNLNQINNHESLCAHKSCLCPLPDCSYVGSVKQLSSHFR 120
           EKVLESIK+PC+N IYGC   M LN IN+HESLC ++ C CPL +C++VGS +QL  HF 
Sbjct: 87  EKVLESIKLPCQNAIYGCKTVMGLNLINDHESLCRYEPCSCPLDNCTFVGSTEQLGLHFT 146

Query: 121 EKHKVLVKSFSYNSRFTICVNIDERYCIFQAENDGVLFFLSYSFEIFGIAVTMSRIGSSS 180
           +KHK   K FSYN+RFTIC+N  + + I +AENDGVLFFLSY+FEIFG AVTM+RIG  S
Sbjct: 147 KKHKDSAKIFSYNTRFTICLNNGDTHRILKAENDGVLFFLSYTFEIFGNAVTMNRIGPLS 206

Query: 181 SERKLCYEIRVKTQGCVLSLQSVANEIQGRSEVPPSNKSLLILNEYFRSSSLKILDFRIW 240
           SE+K CYEI+ KT G VLSLQS+A EIQG  +VPPS  SLLI NEYF SS+  +L+  IW
Sbjct: 207 SEKKFCYEIKAKTLGSVLSLQSIAKEIQGLIKVPPSKGSLLIPNEYFGSSTQTMLEISIW 266

Query: 241 LA 243
            A
Sbjct: 267 PA 268

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BLAST of Sed0019817.1 vs. ExPASy Swiss-Prot
Match: Q84K34 (E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana OX=3702 GN=At5g37930 PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 4.3e-42
Identity = 90/249 (36.14%), Postives = 142/249 (57.03%), Query Frame = 0


Query: 1   MNVIFTDPQVLDCHICCKPLYVPVYQCENGHISCCSCCTKVQNKCPSCGPAKGFIRCIAI 60
           ++V   DP VLDC ICC+PL +P++QC+NGH++C  CCTKV+N+CPSC    G++RC A+
Sbjct: 101 LSVTLLDPDVLDCPICCEPLKIPIFQCDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAM 160

Query: 61  EKVLESIKIPCKNLIYGCNETMNLNQINNHESLCAHKSCLCPLPDCSYVGSVKQLSSHFR 120
           EKV+E+ ++ C N  YGC E+ +     +HE +C    C CP+ DC Y G  K L++H R
Sbjct: 161 EKVIEASRVSCLNAKYGCKESTSYGNRFSHEQVCVFTPCSCPILDCHYTGYYKDLNNHVR 220

Query: 121 EKHKVLVKSFSYNSRFTICVNIDERYCIFQAENDGVLFFLSYSFEIFGIAVTMSRIGS-- 180
            +HK  + SF +N+R TI ++++++  I Q ENDG +  +     +  + V++S I    
Sbjct: 221 AEHKDDLISFVWNTRLTISLDLNKKTTILQEENDGHVIVVQVFRALHAVYVSVSCIAPLT 280

Query: 181 ------SSSERKLCYEIRVKTQGCVLSLQSVANEIQGRSEVPPSNKSLLILNEYFRSSSL 240
                 S    K+  +  +K    V ++Q V NE        P +  +LI +  F  S  
Sbjct: 281 PGVGRLSCRLAKITVDSLLKQGFMVKNIQKVTNE-------HPEDGFMLIPSYLF--SGN 340

Query: 241 KILDFRIWL 242
             L+ +IW+
Sbjct: 341 DNLNLQIWI 340

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BLAST of Sed0019817.1 vs. ExPASy Swiss-Prot
Match: Q9FKD7 (E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana OX=3702 GN=At5g37890 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.4e-32
Identity = 79/237 (33.33%), Postives = 120/237 (50.63%), Query Frame = 0


Query: 2   NVIFTDPQVLDCHICCKPLYVPVYQCENGHISCCSCCTKVQNKCPSCGPAKGFIRCIAIE 61
           + +  D ++LDC IC +   +P++QC+NGH++C SCC K+ NKCP+C    G  RC A+E
Sbjct: 40  STMLMDLEILDCPICYEAFTIPIFQCDNGHLACSSCCPKLNNKCPACTSPVGHNRCRAME 99

Query: 62  KVLESIKIPCKNLIYGCNETMNLNQINNHESLCAHKSCLCPLPDCSYVGSVKQLSSHFRE 121
            VLESI IPC N   GC + ++  +   HE  C    C CP  DC+Y  S K L +H+R 
Sbjct: 100 SVLESILIPCPNAKLGCKKNVSYGKELTHEKECMFSHCACPALDCNYTSSYKDLYTHYRI 159

Query: 122 KHKVL--VKSFSYNSRFTICVNIDERYCIFQAENDGVLFFLSYSFEIFGIAVTMSRIGSS 181
            H  +  + +F  +   ++ +NI ++  I        LF +    E +G+ VT+S I  S
Sbjct: 160 THMEINQINTFICDIPLSVRMNISKKILIRTEHLTNHLFAVQCFREPYGVYVTVSCIAPS 219

Query: 182 SSE-RKLCYEIRVKTQGCVLSLQS-VANEIQGRSEVPPSNKSLLILNEYFRSSSLKI 235
           S E  +  Y +     G  +  QS     +   S   P    +LI N   R   L++
Sbjct: 220 SPELSQYSYALSYTVDGHTVIYQSPEVKRVLKLSFQTPQENFMLIPNSLLRGDVLEM 276

[Close]

BLAST of Sed0019817.1 vs. ExPASy Swiss-Prot
Match: Q9FKD9 (Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana OX=3702 GN=At5g37870 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.8e-32
Identity = 68/183 (37.16%), Postives = 105/183 (57.38%), Query Frame = 0


Query: 2   NVIFTDPQVLDCHICCKPLYVPVYQCENGHISCCSCCTKVQNKCPSCGPAKGFIRCIAIE 61
           + + TD  +LDC IC + L +PV+QC NGH++C SCC K++NKCP+C    G IRC A+E
Sbjct: 34  SAMLTDLDILDCPICYQALKIPVFQCGNGHLACSSCCPKLRNKCPACALPVGHIRCRAME 93

Query: 62  KVLESIKIPCKNLIYGCNETMNLNQINNHESLCAHKSCLCPLPDCSYVGSVKQLSSHFRE 121
           +VLES+ +PC+    GC +T+   + + HE +C    C CP+  C+Y GS K L  H+  
Sbjct: 94  RVLESVLVPCRYADLGCTKTIYYGRESTHEKICNFSPCSCPVQGCNYTGSYKDLYEHYDL 153

Query: 122 KHKVLVKSFSYN--SRFTICVNIDERYCIFQAENDGVLFFLSYSFEIFGIAVTMSRIGSS 181
            H     ++S+N  S     + I ++  I +     +LF +    E  G+ V++S I  S
Sbjct: 154 THSTGSTAYSFNGVSYIAAMMFISDKILIERVYEKKLLFVVQCFEEPCGVYVSVSCIAPS 213

Query: 182 SSE 183
           + E
Sbjct: 214 APE 216

[Close]

BLAST of Sed0019817.1 vs. ExPASy Swiss-Prot
Match: Q9FM14 (E3 ubiquitin-protein ligase SINA-like 11 OS=Arabidopsis thaliana OX=3702 GN=At5g62800 PE=2 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 3.4e-31
Identity = 73/216 (33.80%), Postives = 116/216 (53.70%), Query Frame = 0


Query: 7   DPQVLDCHICCKPLYVPVYQCENGHISCCSCCTKVQNKC--PSCGPAKGFIRCIAIEKVL 66
           D  VLDC +C +PL +P +QC++GHI C  C  KV NKC  P C    G  RC A+E+VL
Sbjct: 37  DLDVLDCPVCFEPLTIPTFQCDDGHIVCNFCFAKVSNKCPGPGCDLPIGNKRCFAMERVL 96

Query: 67  ESIKIPCKNLIYGCNETMNLNQINNHESLCAHKSCLCPLPDCSYVGSVKQLSSHFREKH- 126
           ES  +PC+N  +GC ++++  ++++HE  C +  C CP  +C+Y GS   +  HF  +H 
Sbjct: 97  ESAFVPCQNTEFGCTKSVSYEKVSSHEKECNYSQCSCPNLECNYTGSYNIIYGHFMRRHL 156

Query: 127 --KVLVKSFSYNSRFTICVNIDERYCIFQAENDGVLFFLSYSFEIFGIAVTMSRIGSSSS 186
               +V S    S   + +NI E+  +       +LF +    E  G+ VT+ RI   +S
Sbjct: 157 YNSTIVSSKWGYSTVDVLINIKEKVSVLWESRQKLLFVVQCFKERHGVYVTVRRIAPPAS 216

Query: 187 E-RKLCYEIRVKTQGCVLSLQS--VANEIQGRSEVP 215
           E +K  Y +     G  ++ +S  V   ++  S++P
Sbjct: 217 EFKKFSYRLSYSIDGHNVTYESPEVKRLLEVNSQIP 252

[Close]

BLAST of Sed0019817.1 vs. ExPASy Swiss-Prot
Match: Q9FKD5 (Putative E3 ubiquitin-protein ligase SINA-like 9 OS=Arabidopsis thaliana OX=3702 GN=At5g37910 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.4e-31
Identity = 81/244 (33.20%), Postives = 124/244 (50.82%), Query Frame = 0


Query: 3   VIFTDPQVLDCHICCKPLYVPVYQCENGHISCCSCCTKVQNKCPSCGPAKGFIRCIAIEK 62
           ++  D  +LDC ICC+ L  P++QC+NGH++C SCC K+ NKCP+C    G  R  A+E 
Sbjct: 28  IVLLDLDILDCPICCEALTSPIFQCDNGHLACGSCCPKLSNKCPACTLPVGHSRSRAMES 87

Query: 63  VLESIKIPCKNLIYGCNETMNLNQINNHESLCAHKSCLCPLPDCSYVGSVKQLSSHFREK 122
           VLESI IPC N+ +GC ++    + + HE  C    C CP   C Y GS K L +H++  
Sbjct: 88  VLESILIPCPNVRFGCTKSFFYGKESAHEKECIFSQCSCPSSVCDYTGSYKDLYAHYKLT 147

Query: 123 HKV----LVKSFSYNSRFTICVNIDERYCIFQAENDGVLFFLSYSFEIFGIAVTMSRIGS 182
           H       +K F   + FT  + I ++  I +     +L  +    E  G+ VT+S I  
Sbjct: 148 HSTNIFWNIKRFRCANFFTTSMLISDKILIKRVHEKKLLLAVQCFREPCGVYVTVSFIAP 207

Query: 183 SSSE-RKLCYEIRVKTQGCVLSLQS--VANEIQGRSEVPPSNKSLLILNEYFRSSSLKIL 240
           S+ E  +  Y++     G  ++ +S  V    +   E P  N  +LI +   R   L++ 
Sbjct: 208 SAPEVGEFSYQLSYNVDGHTVTYESPEVKRVCKVSIETPQEN-FMLIPHSLLRGDLLEMQ 267

[Close]

BLAST of Sed0019817.1 vs. ExPASy TrEMBL
Match: A0A6J1CNI1 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111013226 PE=3 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 4.3e-93
Identity = 165/240 (68.75%), Postives = 196/240 (81.67%), Query Frame = 0


Query: 1   MNVIFTDPQVLDCHICCKPLYVPVYQCENGHISCCSCCTKVQNKCPSCGPAKGFIRCIAI 60
           MNVIF+DPQ+LDC+ICC+PL  PV+QCENGHI+C SCCTKVQNKCPSC  + G+IRC AI
Sbjct: 26  MNVIFSDPQLLDCYICCEPLSAPVFQCENGHIACSSCCTKVQNKCPSCSLSIGYIRCRAI 85

Query: 61  EKVLESIKIPCKNLIYGCNETMNLNQINNHESLCAHKSCLCPLPDCSYVGSVKQLSSHFR 120
           EKVLESIKIPC N IYGC  TM LN+ N+H SLC ++ C CP+ DC +VGS ++L SHF 
Sbjct: 86  EKVLESIKIPCHNSIYGCKMTMTLNERNDHGSLCTYEPCSCPVSDCLFVGSSEKLCSHFS 145

Query: 121 EKHKVLVKSFSYNSRFTICVNIDERYCIFQAENDGVLFFLSYSFEIFGIAVTMSRIGSSS 180
           +KHK   KSFSYNSRFT+C+N  + Y I QAE DG LFFLS++FEIFG AVT+SRIG SS
Sbjct: 146 KKHKNSAKSFSYNSRFTLCLNSGDSYRILQAEKDGALFFLSFTFEIFGNAVTVSRIGPSS 205

Query: 181 SERKLCYEIRVKTQGCVLSLQSVANEIQGRSEVPPSNKSLLILNEYFRSSSLKILDFRIW 240
           SE+K CYEI+ KTQG +L LQS+A EIQGR EVPPSN+SLLI NE+F SS+  IL+FRIW
Sbjct: 206 SEKKFCYEIKAKTQGSILCLQSIAKEIQGRVEVPPSNRSLLIPNEFFGSSAQTILEFRIW 265

[Close]

BLAST of Sed0019817.1 vs. ExPASy TrEMBL
Match: A0A6J1GBP1 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111452508 PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 6.2e-92
Identity = 168/241 (69.71%), Postives = 195/241 (80.91%), Query Frame = 0


Query: 1   MNVIFTDPQVLDCHICCKPLYVPVYQCENGHISCCSCCTKVQNKCPSCGPAKGFIRCIAI 60
           M VI TDPQVLDC+ICC+PL VPVYQCENGHISC SCC+KVQNKCPSC  A G++RC AI
Sbjct: 297 MKVILTDPQVLDCYICCEPLSVPVYQCENGHISCSSCCSKVQNKCPSCSLAIGYMRCRAI 356

Query: 61  EKVLESIKIPCKNLIYGCNETMNLNQINNHESLCAHKSCLCPLPDCSYVGSVKQLSSHFR 120
           EKVLESIK+PC+N  YGC  T NLNQIN HE+LC ++ C CPL DCSYV S + LSSHFR
Sbjct: 357 EKVLESIKMPCQNSRYGCKTTTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEYLSSHFR 416

Query: 121 EKHKVLVKSFSYNSRFTICVNIDERYCIFQAENDGVLFFLSYSFEIFGIAVTMSRIGSSS 180
           ++H+   KS SYNSRFTIC+N D++YCIFQAENDGVLF LSYSFE FG AVT++RIG  S
Sbjct: 417 KRHQDSAKSISYNSRFTICLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLNRIGPRS 476

Query: 181 SERKLCYEIRVKTQGCVLSLQSVANEIQGRSEVPPSNKSLLILNEYFRSSSLK-ILDFRI 240
           SE+K CY+I+ K+QG VLSL SVA EIQ  +E PPS  SLLI NE+F SSS + IL+ RI
Sbjct: 477 SEKKFCYDIKAKSQGSVLSLLSVAKEIQRWTEDPPSKGSLLIPNEFFGSSSAQTILEIRI 536

[Close]

BLAST of Sed0019817.1 vs. ExPASy TrEMBL
Match: A0A6J1K8G5 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111492642 PE=3 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.3e-89
Identity = 166/241 (68.88%), Postives = 191/241 (79.25%), Query Frame = 0


Query: 1   MNVIFTDPQVLDCHICCKPLYVPVYQCENGHISCCSCCTKVQNKCPSCGPAKGFIRCIAI 60
           M VIFTDPQ+LDC+ICC+PL VPVYQCENGHISC SCC+KV NKCPSC  A G+IRC AI
Sbjct: 27  MKVIFTDPQILDCYICCEPLSVPVYQCENGHISCSSCCSKVHNKCPSCSLAIGYIRCRAI 86

Query: 61  EKVLESIKIPCKNLIYGCNETMNLNQINNHESLCAHKSCLCPLPDCSYVGSVKQLSSHFR 120
           EKVLESIKIPC+N  YGC  TMNLNQIN HE+ C ++ C CP+ DCSYV S + L SHFR
Sbjct: 87  EKVLESIKIPCQNSKYGCKITMNLNQINEHETSCPYEPCSCPISDCSYVDSAEHLGSHFR 146

Query: 121 EKHKVLVKSFSYNSRFTICVNIDERYCIFQAENDGVLFFLSYSFEIFGIAVTMSRIGSSS 180
           ++H+   KSF YNSRFTIC+N  +RY IFQAEND  LF LSYSFEIFG AVT+SRIGS  
Sbjct: 147 KRHQDSAKSFLYNSRFTICLNSGDRYRIFQAENDDALFVLSYSFEIFGNAVTLSRIGSPL 206

Query: 181 SERKLCYEIRVKTQGCVLSLQSVANEIQGRSEVPPSNKSLLILNEYFRSSSLK-ILDFRI 240
           SE+K CY+I+ K+QG VLSLQSVA EIQ  +E PP   SLLI NE+F SSS + IL+ RI
Sbjct: 207 SEKKFCYDIKAKSQGSVLSLQSVAKEIQRWTEDPPFKGSLLIPNEFFGSSSAQTILEIRI 266

[Close]

BLAST of Sed0019817.1 vs. ExPASy TrEMBL
Match: A0A0A0L9Z6 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G185660 PE=3 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.3e-89
Identity = 161/242 (66.53%), Postives = 193/242 (79.75%), Query Frame = 0


Query: 1   MNVIFTDPQVLDCHICCKPLYVPVYQCENGHISCCSCCTKVQNKCPSCGPAKGFIRCIAI 60
           +NVIFTDPQ+LDC+ICC+PL +PV+QCENGHI+C SCCTK QNKCPSC  A G+IRC AI
Sbjct: 27  LNVIFTDPQILDCYICCEPLSIPVFQCENGHIACSSCCTKAQNKCPSCTLAIGYIRCRAI 86

Query: 61  EKVLESIKIPCKNLIYGCNETMNLNQINNHESLCAHKSCLCPLPDCSYVGSVKQLSSHFR 120
           EKVLESIK+PC+N IYGC   M LN IN+HESLC ++ C CPL +C++VGS +QL  HF 
Sbjct: 87  EKVLESIKLPCQNAIYGCKTVMGLNLINDHESLCRYEPCSCPLDNCTFVGSTEQLGLHFT 146

Query: 121 EKHKVLVKSFSYNSRFTICVNIDERYCIFQAENDGVLFFLSYSFEIFGIAVTMSRIGSSS 180
           +KHK   K FSYN+RFTIC+N  + + I +AENDGVLFFLSY+FEIFG AVTM+RIG  S
Sbjct: 147 KKHKDSAKIFSYNTRFTICLNNGDTHRILKAENDGVLFFLSYTFEIFGNAVTMNRIGPLS 206

Query: 181 SERKLCYEIRVKTQGCVLSLQSVANEIQGRSEVPPSNKSLLILNEYFRSSSLKILDFRIW 240
           SE+K CYEI+ KT G VLSLQS+A EIQG  +VPPS  SLLI NEYF SS+  +L+  IW
Sbjct: 207 SEKKFCYEIKAKTLGSVLSLQSIAKEIQGLIKVPPSKGSLLIPNEYFGSSTQTMLEISIW 266

Query: 241 LA 243
            A
Sbjct: 267 PA 268

[Close]

BLAST of Sed0019817.1 vs. ExPASy TrEMBL
Match: A0A6J1KAW2 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111492641 PE=3 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.7e-89
Identity = 164/241 (68.05%), Postives = 189/241 (78.42%), Query Frame = 0


Query: 1   MNVIFTDPQVLDCHICCKPLYVPVYQCENGHISCCSCCTKVQNKCPSCGPAKGFIRCIAI 60
           M VI TDPQVLDC+ICC PL VPVYQCENGHISC SCC+KV NKCPSC    G++RC AI
Sbjct: 27  MKVILTDPQVLDCYICCVPLSVPVYQCENGHISCSSCCSKVHNKCPSCSLPIGYMRCRAI 86

Query: 61  EKVLESIKIPCKNLIYGCNETMNLNQINNHESLCAHKSCLCPLPDCSYVGSVKQLSSHFR 120
           EKVLESIK+PC+N  YGC  T NLNQIN HE+LC ++ C CPL DCSYV S + L SHFR
Sbjct: 87  EKVLESIKMPCQNSRYGCKTTTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEHLGSHFR 146

Query: 121 EKHKVLVKSFSYNSRFTICVNIDERYCIFQAENDGVLFFLSYSFEIFGIAVTMSRIGSSS 180
           ++H+   KS SYNSRFTIC+N D++YCIFQAENDGVLF LSYSFE FG AVT+ RIG  S
Sbjct: 147 KRHQDSAKSISYNSRFTICLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLKRIGPRS 206

Query: 181 SERKLCYEIRVKTQGCVLSLQSVANEIQGRSEVPPSNKSLLILNEYFRSSSLK-ILDFRI 240
           SE+K CY+I+ K+ G VLSL SVA EIQ  +E PPS  SLLI NE+F SSS + IL+ RI
Sbjct: 207 SEKKFCYDIKAKSHGNVLSLLSVAKEIQRWTEDPPSKGSLLIPNEFFGSSSAQTILEIRI 266

[Close]

BLAST of Sed0019817.1 vs. TAIR 10
Match: AT5G37930.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 172.9 bits (437), Expect = 3.1e-43
Identity = 90/249 (36.14%), Postives = 142/249 (57.03%), Query Frame = 0


Query: 1   MNVIFTDPQVLDCHICCKPLYVPVYQCENGHISCCSCCTKVQNKCPSCGPAKGFIRCIAI 60
           ++V   DP VLDC ICC+PL +P++QC+NGH++C  CCTKV+N+CPSC    G++RC A+
Sbjct: 101 LSVTLLDPDVLDCPICCEPLKIPIFQCDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAM 160

Query: 61  EKVLESIKIPCKNLIYGCNETMNLNQINNHESLCAHKSCLCPLPDCSYVGSVKQLSSHFR 120
           EKV+E+ ++ C N  YGC E+ +     +HE +C    C CP+ DC Y G  K L++H R
Sbjct: 161 EKVIEASRVSCLNAKYGCKESTSYGNRFSHEQVCVFTPCSCPILDCHYTGYYKDLNNHVR 220

Query: 121 EKHKVLVKSFSYNSRFTICVNIDERYCIFQAENDGVLFFLSYSFEIFGIAVTMSRIGS-- 180
            +HK  + SF +N+R TI ++++++  I Q ENDG +  +     +  + V++S I    
Sbjct: 221 AEHKDDLISFVWNTRLTISLDLNKKTTILQEENDGHVIVVQVFRALHAVYVSVSCIAPLT 280

Query: 181 ------SSSERKLCYEIRVKTQGCVLSLQSVANEIQGRSEVPPSNKSLLILNEYFRSSSL 240
                 S    K+  +  +K    V ++Q V NE        P +  +LI +  F  S  
Sbjct: 281 PGVGRLSCRLAKITVDSLLKQGFMVKNIQKVTNE-------HPEDGFMLIPSYLF--SGN 340

Query: 241 KILDFRIWL 242
             L+ +IW+
Sbjct: 341 DNLNLQIWI 340

[Close]

BLAST of Sed0019817.1 vs. TAIR 10
Match: AT5G37890.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 141.4 bits (355), Expect = 9.9e-34
Identity = 79/237 (33.33%), Postives = 120/237 (50.63%), Query Frame = 0


Query: 2   NVIFTDPQVLDCHICCKPLYVPVYQCENGHISCCSCCTKVQNKCPSCGPAKGFIRCIAIE 61
           + +  D ++LDC IC +   +P++QC+NGH++C SCC K+ NKCP+C    G  RC A+E
Sbjct: 40  STMLMDLEILDCPICYEAFTIPIFQCDNGHLACSSCCPKLNNKCPACTSPVGHNRCRAME 99

Query: 62  KVLESIKIPCKNLIYGCNETMNLNQINNHESLCAHKSCLCPLPDCSYVGSVKQLSSHFRE 121
            VLESI IPC N   GC + ++  +   HE  C    C CP  DC+Y  S K L +H+R 
Sbjct: 100 SVLESILIPCPNAKLGCKKNVSYGKELTHEKECMFSHCACPALDCNYTSSYKDLYTHYRI 159

Query: 122 KHKVL--VKSFSYNSRFTICVNIDERYCIFQAENDGVLFFLSYSFEIFGIAVTMSRIGSS 181
            H  +  + +F  +   ++ +NI ++  I        LF +    E +G+ VT+S I  S
Sbjct: 160 THMEINQINTFICDIPLSVRMNISKKILIRTEHLTNHLFAVQCFREPYGVYVTVSCIAPS 219

Query: 182 SSE-RKLCYEIRVKTQGCVLSLQS-VANEIQGRSEVPPSNKSLLILNEYFRSSSLKI 235
           S E  +  Y +     G  +  QS     +   S   P    +LI N   R   L++
Sbjct: 220 SPELSQYSYALSYTVDGHTVIYQSPEVKRVLKLSFQTPQENFMLIPNSLLRGDVLEM 276

[Close]

BLAST of Sed0019817.1 vs. TAIR 10
Match: AT5G37870.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 141.0 bits (354), Expect = 1.3e-33
Identity = 68/183 (37.16%), Postives = 105/183 (57.38%), Query Frame = 0


Query: 2   NVIFTDPQVLDCHICCKPLYVPVYQCENGHISCCSCCTKVQNKCPSCGPAKGFIRCIAIE 61
           + + TD  +LDC IC + L +PV+QC NGH++C SCC K++NKCP+C    G IRC A+E
Sbjct: 34  SAMLTDLDILDCPICYQALKIPVFQCGNGHLACSSCCPKLRNKCPACALPVGHIRCRAME 93

Query: 62  KVLESIKIPCKNLIYGCNETMNLNQINNHESLCAHKSCLCPLPDCSYVGSVKQLSSHFRE 121
           +VLES+ +PC+    GC +T+   + + HE +C    C CP+  C+Y GS K L  H+  
Sbjct: 94  RVLESVLVPCRYADLGCTKTIYYGRESTHEKICNFSPCSCPVQGCNYTGSYKDLYEHYDL 153

Query: 122 KHKVLVKSFSYN--SRFTICVNIDERYCIFQAENDGVLFFLSYSFEIFGIAVTMSRIGSS 181
            H     ++S+N  S     + I ++  I +     +LF +    E  G+ V++S I  S
Sbjct: 154 THSTGSTAYSFNGVSYIAAMMFISDKILIERVYEKKLLFVVQCFEEPCGVYVSVSCIAPS 213

Query: 182 SSE 183
           + E
Sbjct: 214 APE 216

[Close]

BLAST of Sed0019817.1 vs. TAIR 10
Match: AT5G62800.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 136.7 bits (343), Expect = 2.4e-32
Identity = 73/216 (33.80%), Postives = 116/216 (53.70%), Query Frame = 0


Query: 7   DPQVLDCHICCKPLYVPVYQCENGHISCCSCCTKVQNKC--PSCGPAKGFIRCIAIEKVL 66
           D  VLDC +C +PL +P +QC++GHI C  C  KV NKC  P C    G  RC A+E+VL
Sbjct: 37  DLDVLDCPVCFEPLTIPTFQCDDGHIVCNFCFAKVSNKCPGPGCDLPIGNKRCFAMERVL 96

Query: 67  ESIKIPCKNLIYGCNETMNLNQINNHESLCAHKSCLCPLPDCSYVGSVKQLSSHFREKH- 126
           ES  +PC+N  +GC ++++  ++++HE  C +  C CP  +C+Y GS   +  HF  +H 
Sbjct: 97  ESAFVPCQNTEFGCTKSVSYEKVSSHEKECNYSQCSCPNLECNYTGSYNIIYGHFMRRHL 156

Query: 127 --KVLVKSFSYNSRFTICVNIDERYCIFQAENDGVLFFLSYSFEIFGIAVTMSRIGSSSS 186
               +V S    S   + +NI E+  +       +LF +    E  G+ VT+ RI   +S
Sbjct: 157 YNSTIVSSKWGYSTVDVLINIKEKVSVLWESRQKLLFVVQCFKERHGVYVTVRRIAPPAS 216

Query: 187 E-RKLCYEIRVKTQGCVLSLQS--VANEIQGRSEVP 215
           E +K  Y +     G  ++ +S  V   ++  S++P
Sbjct: 217 EFKKFSYRLSYSIDGHNVTYESPEVKRLLEVNSQIP 252

[Close]

BLAST of Sed0019817.1 vs. TAIR 10
Match: AT5G37910.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 136.7 bits (343), Expect = 2.4e-32
Identity = 81/244 (33.20%), Postives = 124/244 (50.82%), Query Frame = 0


Query: 3   VIFTDPQVLDCHICCKPLYVPVYQCENGHISCCSCCTKVQNKCPSCGPAKGFIRCIAIEK 62
           ++  D  +LDC ICC+ L  P++QC+NGH++C SCC K+ NKCP+C    G  R  A+E 
Sbjct: 28  IVLLDLDILDCPICCEALTSPIFQCDNGHLACGSCCPKLSNKCPACTLPVGHSRSRAMES 87

Query: 63  VLESIKIPCKNLIYGCNETMNLNQINNHESLCAHKSCLCPLPDCSYVGSVKQLSSHFREK 122
           VLESI IPC N+ +GC ++    + + HE  C    C CP   C Y GS K L +H++  
Sbjct: 88  VLESILIPCPNVRFGCTKSFFYGKESAHEKECIFSQCSCPSSVCDYTGSYKDLYAHYKLT 147

Query: 123 HKV----LVKSFSYNSRFTICVNIDERYCIFQAENDGVLFFLSYSFEIFGIAVTMSRIGS 182
           H       +K F   + FT  + I ++  I +     +L  +    E  G+ VT+S I  
Sbjct: 148 HSTNIFWNIKRFRCANFFTTSMLISDKILIKRVHEKKLLLAVQCFREPCGVYVTVSFIAP 207

Query: 183 SSSE-RKLCYEIRVKTQGCVLSLQS--VANEIQGRSEVPPSNKSLLILNEYFRSSSLKIL 240
           S+ E  +  Y++     G  ++ +S  V    +   E P  N  +LI +   R   L++ 
Sbjct: 208 SAPEVGEFSYQLSYNVDGHTVTYESPEVKRVCKVSIETPQEN-FMLIPHSLLRGDLLEMQ 267

The following BLAST results are available for this feature:

BLAST of Sed0019817.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143325.1	8.8e-93	68.75	E3 ubiquitin-protein ligase SINA-like 10 [Momordica charantia]	[more]
KAG6606997.1	1.3e-91	69.71	E3 ubiquitin-protein ligase SINA-like 10, partial [Cucurbita argyrosperma subsp....	[more]
XP_022949045.1	1.3e-91	69.71	uncharacterized protein LOC111452508 [Cucurbita moschata]	[more]
XP_022997791.1	2.7e-89	68.88	E3 ubiquitin-protein ligase SINA-like 10 [Cucurbita maxima]	[more]
XP_004140738.2	2.7e-89	66.53	E3 ubiquitin-protein ligase SINA-like 10 [Cucumis sativus] >KGN57437.1 hypotheti...	[more]

BLAST of Sed0019817.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84K34	4.3e-42	36.14	E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana OX=3702 GN=At5g...	[more]
Q9FKD7	1.4e-32	33.33	E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana OX=3702 GN=At5g3...	[more]
Q9FKD9	1.8e-32	37.16	Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana OX=3702...	[more]
Q9FM14	3.4e-31	33.80	E3 ubiquitin-protein ligase SINA-like 11 OS=Arabidopsis thaliana OX=3702 GN=At5g...	[more]
Q9FKD5	3.4e-31	33.20	Putative E3 ubiquitin-protein ligase SINA-like 9 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Sed0019817.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CNI1	4.3e-93	68.75	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11101322...	[more]
A0A6J1GBP1	6.2e-92	69.71	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111452508...	[more]
A0A6J1K8G5	1.3e-89	68.88	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111492642 P...	[more]
A0A0A0L9Z6	1.3e-89	66.53	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G185660 PE...	[more]
A0A6J1KAW2	3.7e-89	68.05	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111492641 P...	[more]

BLAST of Sed0019817.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G37930.1	3.1e-43	36.14	Protein with RING/U-box and TRAF-like domains	[more]
AT5G37890.1	9.9e-34	33.33	Protein with RING/U-box and TRAF-like domains	[more]
AT5G37870.1	1.3e-33	37.16	Protein with RING/U-box and TRAF-like domains	[more]
AT5G62800.1	2.4e-32	33.80	Protein with RING/U-box and TRAF-like domains	[more]
AT5G37910.1	2.4e-32	33.20	Protein with RING/U-box and TRAF-like domains	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018121	Seven-in-absentia protein, TRAF-like domain	PFAM	PF03145	Sina	coord: 55..212 e-value: 1.6E-18 score: 67.4
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 61..119 e-value: 1.2E-15 score: 59.5
None	No IPR available	PANTHER	PTHR46632:SF16	E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4	coord: 3..240
None	No IPR available	SUPERFAMILY	49599	TRAF domain-like	coord: 66..224
IPR044286	E3 ubiquitin-protein ligase SINA-like, plant	PANTHER	PTHR46632	E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4	coord: 3..240
IPR013010	Zinc finger, SIAH-type	PROSITE	PS51081	ZF_SIAH	coord: 66..124 score: 13.485838

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0019817	Sed0019817	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0019817.1-exon	Sed0019817.1-exon-LG05:38597749..38597826	exon
Sed0019817.1-exon	Sed0019817.1-exon-LG05:38598917..38599570	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0019817.1-cds	Sed0019817.1-cds-LG05:38597749..38597826	CDS
Sed0019817.1-cds	Sed0019817.1-cds-LG05:38598917..38599570	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0019817.1	Sed0019817.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016740	transferase activity