Sed0019564.1 (mRNA) Chayote v1

Overview


Name	Sed0019564.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	protein TIC 22-like, chloroplastic
Location	LG09: 4934267 .. 4941199 (-)
Sequence length	1144
RNA-Seq Expression	Sed0019564.1
Synteny	Sed0019564.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTATTAAACCCTTTCTTCTTCTTTCTTCTTCTTCTTCTGCAACTGTTGAGGCGAAAATGAGTTCCCCAAGAAATGGCTCAAAACCCACACAACTCGAAACCCACCTTCGTGAAGCTCTATCCACCTTCCAAACCCACTGCTCTGGTTTGCTCCACAGCCTCTCCAACCTCCCACCCTTCAAAACCCACCTCCAATCCCCCACAATTTCACCCTCAGACCCCTTCCCCAGAACCCCACTTTGGGCTCGGGTCGCGGCGGGCGCCCAATTCGCCCCCCCCGTCCGGCCCGGCACCGCCTTGTCGACGAAGGCCATCGAGGAGCGGCTGGCGGGTATTCCCGTCTATGCCCTCAGCAATGCGGCTGAGGAATTCGTCCTTGTTTCTGGGGTTTCCACTGCCAAATCTATGGGGTTGTTTTGCTTTAAGAAGGAGGATGCGGAATTGCTTCTTCGGCACGTTGGAGCCGTGGATTCTTCGGCGAAAAACGGGTCGAAAGTCGTCGCGGTTGCTTTGAATAAAGTGGGTGTTGTGTTGCTGAGTTTTTATGTGTTTTTTGTGTGTGAGGAAGGTTTTCTTGGAATTTGATGTTGTTGGTTTTGTAGGTTTTTCAGCTTCATGTTGATGGGGTGGCCTTTAGATTGGTTCCGGAGTGCTCTCAAGTGAAAAATGCTCTGAATGTAAGTTTTTCTCTCGGTTACTCTTTAGGGATGTTTGTGGCAAAGAGAATGATAATGATTGTGGAGAGGTCCCTAAGGGGTGGCATAGTGTTTGAAGATTTGGGCTTTGAAGGTATGCTCCCCTAGGTTTGAGACTCTTCGATGTCTCTGGTGCCTGGCCTGGAGACGGGCGTGGTTACCCTTGTTCTGAAAATGATTATGGAGAGAATGAAAATTATGGGGAGAATGAGATAGAGAATATGGGGGAGAATGGTTATCCTACGGAATGAGAATTAAGAGAATACGAGGGAGAATAATTATTTGTATTTGGAGTGAAGCTAATGACTACGAGGGAGATACTTATGTTTGGAGGAAAAAAGAATAATTATGAAGAGAATAAAATAGTGAGTATCAATAGGATGTTATAGAGAGCGAAAAGTTATTATTGGGAAAATAAAAAGTAGTTAGGAAGAAAATATAAAGTGATTATGGAAAAATGAGATTGGGGTGTTTGGGCTAAGAGAATGAGAATGATTATGGAGAGGATAAGAATTAGAGGAAGAATGATTACAAGATGGATGAAAATTAAATTGAGAATGATTATCTATGTTTGGGGTGAAGCCAGAGATTATGGAGAGAATGAGAACCATTACTTGTGTTTGTGTATGGGGTGAATAGAATAATCATGAGGAGAATAAAATAGTGAGCACGAAAGAATCAGGGATTATTTGGAGAATGAAAAGTAGTTACTGAGAGAATAAATAGTGGTCACGGAGAAGTTGTCCGGAAAAAAGTGGTTATGGACAAAAGTGATTAGGAAGGGAATGATTTTCGGTGGCTCAAACGTGGGTTAGAGAATGATTCTCCCATAACCATTGACATCCTCTTTATTTCAAACACCCCTTTATGGTGTTTGTTGGAAAGCCGAAATGAATTTTGAATTTAGTTTCTCTCATATATTTTTTTTCTAATAGGTTCAAAATATTCCTTTTTCTAATGAATGCCAAATAACAGTATCTGTTACTCTTCAGTACAGAGAGTCCTGTGCTGTTTTCCTTTATCTATTTGTGGCTGTGGCCTAAAATTTTATCTTTATGCTTTTCAGTTGTCATTATCGTTATTAATTATGTCCCCAAGGGGTGTTAGACTGGTTTAAGACTTGGGCTTTGAAGGTATGCTCCTTTCAAGGTCTTAGGTTTGAGACTCACCTGTGACATTACTCCTTTAATGTCTCCCGGTGCCTGCCGAGGGATGGGCGTGGTTACCCATGTTTCAAAAAGAAATTATCTTTATTTATCATGTTCTTTGTTTGAGCGTAGGAAAGAGAAAAGGCCGGCATTTCTGCTAATGGATTTCCAGGGGTTCCTGTTTTCCAGGTTCATTTCTAACATTTCTGACTCAAAATTGGTACTCAGTGCATTTCCTGACCGCTATGCAATTTACATTCAATGGTAGAGAAAGAAGCACTTCTAGGAATCTGCTAACCTTTTACTTTGGAAGTATAGACTTGATTAATATCGAGTTTGTTTTTCATTTCTTGTTTATGAAAATTATGTTATCTTAGTTTGGATAGTCACTTTTCAAACGTACTTTTTATATTTTCCCATAAAAAAAAGTATTTTTGAATTCTCAGTCAGATTTAAAAAATAAGAAACCGAATTTCCAAGAGTGGGCTATAGTTTCAAAACAGTTTCAAAAGAAATTAGAAAGCAGTGGAAAATGTCAGTAAATAAGCATAACTTTCAAAAACTGAAAACTGCAGATATAAACGTTTTCAAACTTATCAATGAAATAGTTTTGTTTCCTATAAAAAATCGTTTTCAAACCAAAAACTTATGTTTGTCAGGAATGCTGAAATCTAAAAACTCTGTTCAAATTAGCAGTCATGGGAATGGTGGCATGCTTTGTCTGAGTATGAAGTCACTTATTGCCTTCTTATAAAAGAAAATATTATTTCCTTGTTAAATGGTTTATGATTATTTTTAACGTTTAATTAATGTTACAAAATTTAATTATTATCATTTTCTTTCCCAATGATTGAAACTTTGAGTTCAAAGGTATATGGTAAATTAACTAATTAGATCAACAATCCAAATTCCCGATATATTCTAATCATTTATTCATAAAAAAGTACCAATCTTTTTTCATTTGTTTTTAAAATATTATAATTGTTTATGATGTAGAACTGTATAACTTTGAGAATTCAGTTGTAGTTTGAATCCACCAGGTTTTCAATTGTTTTGGATACATAAGTTTGATATTTTGAAACTCTAGGATAGTTTCTGAGATTTGATCTGTCAGAATAAAGCCAAATGAACAAAAAATATGAATGTATTATCTCAATAATAAAAAGAATATTGCAGTTCCATAAACGAAGCAAGTAAAGCTGGAATCAATGTAGCTATCCACATTTTCCCCCTGTTTTGTTTTTCTCCAACCATCAAAACCTACACAGCACAATTTAGAAGTAGTGTTATTGAGGAGTGTGCCTCAATTTGCCTATGGGTAGAGGTGAGGTGCCTCTTGCCTATAATGCCTCAGCTCAAGTCCATGGCATGCACGTCATGCCGCGGTGGCATTGTTGTCACCATGAGCGGTTCGTGTCTTCATGGTGAGCTAAAACTTGAAGGGAAAAAACAAGTATATTTTAGGGAGATAAGAAAATCCAAACAACAACGTTCTTCAACTTTCCATCTTCACATTTGAAGCATGAATTCCAAGTCCAAACCCCTTCCTTTTCACAGCGTAAAATAGGAACGAAAGCTGAATAAAAAGAAAATCTTTCCTCTTCTTTGATTACCCTCGAAGCTGCAAGGGATCCACAATAATATATGCCTCCTGCTCGGTTCAATTTTTAGCCATAAAGGAAAAATATTCTCCTCTTCCTTGATAGTTTTGTTGTTGCCTTTGATTTCCTCTTCTGGTTTTTTCTCTCTAAAGATGTCATTGGTCCCATTCCTAAAGGGTGGTGCAATGGTCGAAGCCTTGGGCTTTAAAGGTGTGCTCTCCTCAAAGTCCTAGGTTCGAGACTTACTTGTGACATTAATTTGTAGACACCTCCCATGTCTCCATTCCTTTGATATCTCTCGGTATCTGATTTAGGGACGGGCGTGGTTATCCCGAGTATAGTGGAGTGAAATTCTGATTTTCCGATTTCCAAAAGGAAAAAAAGATGTCATTGGCTCCACTCCCTCTATCAATATCTGGAGGTTATGCTCATATAGACTGCAGTTATATCAATATTATTTTTTGTCTTGTTTTTTCACTGTCCTTTGTAGAACAAGAAACCAAACTTTTTTTTCTGATAAGAAAAATAATTTTTGTAGGGTTGTAAAATTGGAAGTGTTTAGAATACAAACTCTATAAAACTTTTATCATTGCGTTTCTACTCATAATTCTTTTCTGTTTTTTTTGTATAATAAAAATTATAGGAACTGAGGAATTTATATATTGTTTTTTTTAATGTTTCATTTACGATTTAATTCATATATTAAAATTGTTCTTAAGCTTGAAGGCTCTGAGATTCTGTGGCTATTTTAAAGAATCTATACACATAATCTATTAGTTTATTTAGTCTCCAAGGAGTGGTTCAATGGTTGAAGACTTGGGCTTTGAAGGTATGCTTCCTTCAAGGTTCCAGATTCGAGACTCACTCATTACTCTTTTGATGTCTCTCAATACCTGGCCTAGGAACGGGCGTGGTTACCCTTGTTTAAAAAAAAAACTATTAGTTTATTTAAATACACCCTGTCACTGTGCCTCTTATTCACTTCTTGTTTCTGTGCCTCTTGGTCGTTTCTTGTCTTGAGTCGATCAAGTGGGTTGTTGTCTTACTATGCATTTTGTGCTTACTAAATGTAACAGATCAATACATTCAAAATAGGTAGCCAAGTCATCATGGCTTCATAACTCTTCTGTGCTGTCTATTTGGGATTCAAAATATATCTTCAAATTTCTATTCTGCAAAATATAGAAAATTTTCGGGTTAAATTTTAAGCCGGATTTCAAACGTAATGAAGCATAGTTATATAAAGTTCCTTTCTCCTTAGTCATTGCTATGTTGCATGCATGGATTTGTTTTCGTTTCGATTTGGCTAATATTACCTTGTTTGAGGATTTCTAAACATTTGGGACTGATGCAATCAATTTTATGCAACTTGCATAGTCAAAGAGCTTGATACTGAGAAGCCAAAACAAGAGTTACCGTCCTGCCTTTTTCAGAAAGGTTAGTTAATAAAAGTAGTTGCCTTGATCTGGGACTCTCAACTTTACATGAAATCATTATTATTTTTTTTATAGGAGGATTTGGAGAATTCTCTAAAAAGAGCATCTAGTGAACAAAATCAAATTAACCCTGCATTACGACCTGGGGATATACAGGTATAGCTTTCTGTGCTTGTTGCTAACTTGCTAGTTAAGCTTGTTATGTGGATGGGAACTTTGAAGTATTATCTGAATCTTGTAGGTCGGTGTTTTTGAAGAAATTATTAAAGGAATGAAGGTGAGAGGCCTACTCTTTTTCACACTCTAAATATTTGTTGTCCCAAAAAGGTGGCACGATAGTCGAATGCTTGAGCTTTGTAGGTGTGCTCCCCTCAAAGTCTGAAGTGTGTGACATTAATTTGTAAACACCTCCCATGTTTCCATTCTTTCGATGTCTCCCAGTACCTAGGGACAAGCATGGTTACTCCGAATGGTTTAAAAAAAACACTCTAAATATTTGTTAAGAGGCAAAATAATTGTAAACCTTTGAATCAACCATCCTCGATTGGCTTAGTGGTTAAGAGGACTTTGGAGAACTAAAGTGTATTGGTTCAATTCATAGTGGCCACCATCCCCAAGGGGTGGCGCAGTGGTTGAAAACTTGGGTTTTGATGGTATGCTCCCCTCAAGGTCCTAGGTTCGAAACTTACCTGTGGCATTACTCCTTCGATGTCTCCGGTGCCTGGCTTAGAGACGGGCGTGTGGTTACCTTATTCAAAAAAAAAAAAAAAAAATCATAGTGGCCACCTACTTAAGAATTAACTATCAAATATTGTAGGGTCATGCGATTTGTCCCGTGAAAAATAGTCGAGGTGTGCATACTTAGGGATGTAAAAAAGTATAAACCCTTGAATCATGCTAAGTTGTAATTTTGTTTCATCGACAGGATAATTCTAATTCAACATGGGATGATGTAGTCTTCATTCCTCCCGGATTTGATGTTTCAACTGACCCCAAAAAACAGCATTAGGCATATTAATGGGATAGGAATTGTGATAGTCGCTGCCATATTTGTCTCATCATACAAAAAGCTTATATAGGTGAAGACTGTAGGGTTCTTAGTTGAGGTAATATCTTGTACGTCCTTAGTTTCTTTTAACTTCATTTTGTTTGTCTTTTTGTTTCTTGTTCATTTGGCAGCTATTTTAGTATTGTTTTTGTGTTTGTTGATTTTTAGAAACATATTTAAAATGTCTTTTGAATATTTTATTTTTAAAAAATGTTTCTTCTATCTTTCTTTTAAAAAAACAAATTAAAACTGAGAGAACAAGAAACTATAAATAGCTACCAAAACCGATCTAGTTTTGATTGATTTTTTTCCAAAAAAAAAAAAAAAAAAAAAAAAACAATCACCAAACATGTTTTAGGTTATGCTTATGACAACTAATAGGTTATGAGTTCGATCCTCCCATCTCTAATGTTATTGAATGAATAACAATAAAATGATTTTTTAGATTATCTTTCTTTCCTCTAATTGGGAGGCCTTTCTTTAGCTTTTTTATAATTTTTGTTCTTCAAGTTGTTTATTGGCTTTTTGGTATTCTGTAGTCTTTTATTCTGTTGGTTGTTTTTATTTTTCTTTGGTTCAAGTTTTGTACACAGACAAAAACAAAGTCTTCAAGAGGCAGGCTTGGAGTCTTCGAGATATGTTCTTTTAGAAGTCTTAAATTCAAAATTTATGAATGAGCTTAATTGTAAAATTTCTCGTTGTCTTCTAAATCTTAGAGACGGGTGTTTCGAGTGTGGAGTGACGTGAAGCTCCGATTCTTAAAAAGAAGCAAAAACATAAACGTTATCAAATGACCTTTAAGCTAAAGCTCTGAGTACCTTAAAATATACCTTGGTTGGACATGACAATGATATTTTTGCTGTTTTTTAGGTTCTAATGATTGGAAGGAGAGGATCTTTTGTTACATTTCTATTAGAGAAGGAATTCTACCAAACTCCAGACCTGCATGAGTATAAATATGCTCTTTTGAGCTAGACTCAGAAATTTATATAATAACAATGTCA

mRNA sequence

AATTATTAAACCCTTTCTTCTTCTTTCTTCTTCTTCTTCTGCAACTGTTGAGGCGAAAATGAGTTCCCCAAGAAATGGCTCAAAACCCACACAACTCGAAACCCACCTTCGTGAAGCTCTATCCACCTTCCAAACCCACTGCTCTGGTTTGCTCCACAGCCTCTCCAACCTCCCACCCTTCAAAACCCACCTCCAATCCCCCACAATTTCACCCTCAGACCCCTTCCCCAGAACCCCACTTTGGGCTCGGGTCGCGGCGGGCGCCCAATTCGCCCCCCCCGTCCGGCCCGGCACCGCCTTGTCGACGAAGGCCATCGAGGAGCGGCTGGCGGGTATTCCCGTCTATGCCCTCAGCAATGCGGCTGAGGAATTCGTCCTTGTTTCTGGGGTTTCCACTGCCAAATCTATGGGGTTGTTTTGCTTTAAGAAGGAGGATGCGGAATTGCTTCTTCGGCACGTTGGAGCCGTGGATTCTTCGGCGAAAAACGGGTCGAAAGTCGTCGCGGTTGCTTTGAATAAAGTTTTTCAGCTTCATGTTGATGGGGTGGCCTTTAGATTGGTTCCGGAGTGCTCTCAAGTGAAAAATGCTCTGAATGAAAGAGAAAAGGCCGGCATTTCTGCTAATGGATTTCCAGGGGTTCCTGTTTTCCAGTCAAAGAGCTTGATACTGAGAAGCCAAAACAAGAGTTACCGTCCTGCCTTTTTCAGAAAGGAGGATTTGGAGAATTCTCTAAAAAGAGCATCTAGTGAACAAAATCAAATTAACCCTGCATTACGACCTGGGGATATACAGGTCGGTGTTTTTGAAGAAATTATTAAAGGAATGAAGGATAATTCTAATTCAACATGGGATGATGTAGTCTTCATTCCTCCCGGATTTGATGTTTCAACTGACCCCAAAAAACAGCATTAGGCATATTAATGGGATAGGAATTGTGATAGTCGCTGCCATATTTGTCTCATCATACAAAAAGCTTATATAGGTGAAGACTGTAGGGTTCTTAGTTGAGGTTCTAATGATTGGAAGGAGAGGATCTTTTGTTACATTTCTATTAGAGAAGGAATTCTACCAAACTCCAGACCTGCATGAGTATAAATATGCTCTTTTGAGCTAGACTCAGAAATTTATATAATAACAATGTCA

Coding sequence (CDS)

ATGAGTTCCCCAAGAAATGGCTCAAAACCCACACAACTCGAAACCCACCTTCGTGAAGCTCTATCCACCTTCCAAACCCACTGCTCTGGTTTGCTCCACAGCCTCTCCAACCTCCCACCCTTCAAAACCCACCTCCAATCCCCCACAATTTCACCCTCAGACCCCTTCCCCAGAACCCCACTTTGGGCTCGGGTCGCGGCGGGCGCCCAATTCGCCCCCCCCGTCCGGCCCGGCACCGCCTTGTCGACGAAGGCCATCGAGGAGCGGCTGGCGGGTATTCCCGTCTATGCCCTCAGCAATGCGGCTGAGGAATTCGTCCTTGTTTCTGGGGTTTCCACTGCCAAATCTATGGGGTTGTTTTGCTTTAAGAAGGAGGATGCGGAATTGCTTCTTCGGCACGTTGGAGCCGTGGATTCTTCGGCGAAAAACGGGTCGAAAGTCGTCGCGGTTGCTTTGAATAAAGTTTTTCAGCTTCATGTTGATGGGGTGGCCTTTAGATTGGTTCCGGAGTGCTCTCAAGTGAAAAATGCTCTGAATGAAAGAGAAAAGGCCGGCATTTCTGCTAATGGATTTCCAGGGGTTCCTGTTTTCCAGTCAAAGAGCTTGATACTGAGAAGCCAAAACAAGAGTTACCGTCCTGCCTTTTTCAGAAAGGAGGATTTGGAGAATTCTCTAAAAAGAGCATCTAGTGAACAAAATCAAATTAACCCTGCATTACGACCTGGGGATATACAGGTCGGTGTTTTTGAAGAAATTATTAAAGGAATGAAGGATAATTCTAATTCAACATGGGATGATGTAGTCTTCATTCCTCCCGGATTTGATGTTTCAACTGACCCCAAAAAACAGCATTAG

Protein sequence

MSSPRNGSKPTQLETHLREALSTFQTHCSGLLHSLSNLPPFKTHLQSPTISPSDPFPRTPLWARVAAGAQFAPPVRPGTALSTKAIEERLAGIPVYALSNAAEEFVLVSGVSTAKSMGLFCFKKEDAELLLRHVGAVDSSAKNGSKVVAVALNKVFQLHVDGVAFRLVPECSQVKNALNEREKAGISANGFPGVPVFQSKSLILRSQNKSYRPAFFRKEDLENSLKRASSEQNQINPALRPGDIQVGVFEEIIKGMKDNSNSTWDDVVFIPPGFDVSTDPKKQH

Homology

[Close]

BLAST of Sed0019564.1 vs. NCBI nr
Match: XP_022959990.1 (protein TIC 22-like, chloroplastic [Cucurbita moschata])

HSP 1 Score: 422.5 bits (1085), Expect = 2.8e-114
Identity = 221/297 (74.41%), Postives = 244/297 (82.15%), Query Frame = 0


Query: 9   KPTQLETHLREALSTFQTHCSGLLHSLSNLPPF------KTHLQS--------------P 68
           KP+QLE +LR+AL+ FQ  CSG+LH+LSNLPPF      K+ LQS               
Sbjct: 61  KPSQLECNLRQALAGFQNQCSGVLHNLSNLPPFNPPLSLKSQLQSTFSSLQNQAKRALDS 120

Query: 69  TISPSDPFPRTPLWARVAAGAQFAPP-VRPGTALSTKAIEERLAGIPVYALSNAAEEFVL 128
            IS  DP  + P+WAR+A  A+   P  RP  ALST+AIEERLAGIPVYALSNA+EEFVL
Sbjct: 121 RISAFDPVAKNPVWARIAETAKTPRPYARPTVALSTEAIEERLAGIPVYALSNASEEFVL 180

Query: 129 VSGVSTAKSMGLFCFKKEDAELLLRHVGAVDSSAKNGSKVVAVALNKVFQLHVDGVAFRL 188
           VSG STAKS+GLFCF KEDAE LL H+G VD SA+NGSKVV VALNKVFQLHV+GVAFRL
Sbjct: 181 VSGASTAKSLGLFCFNKEDAETLLGHIGTVDPSAQNGSKVVTVALNKVFQLHVNGVAFRL 240

Query: 189 VPECSQVKNALNEREKAGISANGFPGVPVFQSKSLILRSQNKSYRPAFFRKEDLENSLKR 248
           +PECSQVKNAL+EREKAGIS NGFPGVPVFQSKSLILRSQNKSYRPAFFRKEDLENSLKR
Sbjct: 241 IPECSQVKNALSEREKAGISDNGFPGVPVFQSKSLILRSQNKSYRPAFFRKEDLENSLKR 300

Query: 249 ASSEQNQINPALRPGDIQVGVFEEIIKGMKDNSNSTWDDVVFIPPGFDVSTDPKKQH 285
           AS +QNQ+NPALRPGD+QV  FE+IIKGMKDNS STWDDVVFIPPGFDVSTDPKKQH
Sbjct: 301 ASQDQNQMNPALRPGDVQVAAFEDIIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQH 357

[Close]

BLAST of Sed0019564.1 vs. NCBI nr
Match: XP_023514114.1 (protein TIC 22-like, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 421.8 bits (1083), Expect = 4.8e-114
Identity = 220/297 (74.07%), Postives = 243/297 (81.82%), Query Frame = 0


Query: 9   KPTQLETHLREALSTFQTHCSGLLHSLSNLPPF------KTHLQS--------------P 68
           KP+QLE +LR+AL+  Q HCSG+LH+LSNLPPF      K+ LQS               
Sbjct: 106 KPSQLECNLRQALAGIQNHCSGVLHNLSNLPPFNPPLSLKSQLQSTFSSLQNQAKRALDS 165

Query: 69  TISPSDPFPRTPLWARVAAGAQFAPP-VRPGTALSTKAIEERLAGIPVYALSNAAEEFVL 128
            IS  DP  + P+WAR+A  A+   P  RP  ALST+AIEERLAGIPVYALSNA+EEFVL
Sbjct: 166 RISAFDPVAKNPVWARIAETAKTPRPYARPTVALSTEAIEERLAGIPVYALSNASEEFVL 225

Query: 129 VSGVSTAKSMGLFCFKKEDAELLLRHVGAVDSSAKNGSKVVAVALNKVFQLHVDGVAFRL 188
           VSG STAKS+G FCF KEDAE LL H+G VD SA+NGSKVV VALNKVFQLHV+GVAFRL
Sbjct: 226 VSGASTAKSLGFFCFNKEDAETLLGHIGTVDPSAQNGSKVVTVALNKVFQLHVNGVAFRL 285

Query: 189 VPECSQVKNALNEREKAGISANGFPGVPVFQSKSLILRSQNKSYRPAFFRKEDLENSLKR 248
           +PECSQVKNAL+EREKAGIS NGFPGVPVFQSKSLILRSQNKSYRPAFFRKEDLENSLKR
Sbjct: 286 IPECSQVKNALSEREKAGISDNGFPGVPVFQSKSLILRSQNKSYRPAFFRKEDLENSLKR 345

Query: 249 ASSEQNQINPALRPGDIQVGVFEEIIKGMKDNSNSTWDDVVFIPPGFDVSTDPKKQH 285
           AS +QNQ+NPALRPGD+QV  FE+IIKGMKDNS STWDDVVFIPPGFDVSTDPKKQH
Sbjct: 346 ASQDQNQMNPALRPGDVQVAAFEDIIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQH 402

[Close]

BLAST of Sed0019564.1 vs. NCBI nr
Match: KAG7025300.1 (Protein TIC 22-like, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 421.0 bits (1081), Expect = 8.1e-114
Identity = 220/297 (74.07%), Postives = 243/297 (81.82%), Query Frame = 0


Query: 9   KPTQLETHLREALSTFQTHCSGLLHSLSNLPPF------KTHLQS--------------P 68
           KP+QLE +LR+AL+ FQ  CSG+LH+LSNLPPF      K+ LQS               
Sbjct: 14  KPSQLECNLRQALAGFQNQCSGVLHNLSNLPPFNPPLSLKSQLQSTFSSLQNQAKRALDS 73

Query: 69  TISPSDPFPRTPLWARVAAGAQFAPP-VRPGTALSTKAIEERLAGIPVYALSNAAEEFVL 128
            IS  DP  + P+WAR+A  A+   P  RP  ALST+AIEERLAGIPVYALSNA+EEFVL
Sbjct: 74  RISAFDPVAKNPVWARIAETAKTPRPYARPTVALSTEAIEERLAGIPVYALSNASEEFVL 133

Query: 129 VSGVSTAKSMGLFCFKKEDAELLLRHVGAVDSSAKNGSKVVAVALNKVFQLHVDGVAFRL 188
           VSG STAKS+G FCF KEDAE LL H+G VD SA+NGSKVV VALNKVFQLHV+GVAFRL
Sbjct: 134 VSGASTAKSLGFFCFNKEDAETLLGHIGTVDPSAQNGSKVVTVALNKVFQLHVNGVAFRL 193

Query: 189 VPECSQVKNALNEREKAGISANGFPGVPVFQSKSLILRSQNKSYRPAFFRKEDLENSLKR 248
           +PECSQVKNAL+EREKAGIS NGFPGVPVFQSKSLILRSQNKSYRPAFFRKEDLENSLKR
Sbjct: 194 IPECSQVKNALSEREKAGISDNGFPGVPVFQSKSLILRSQNKSYRPAFFRKEDLENSLKR 253

Query: 249 ASSEQNQINPALRPGDIQVGVFEEIIKGMKDNSNSTWDDVVFIPPGFDVSTDPKKQH 285
           AS +QNQ+NPALRPGD+QV  FE+IIKGMKDNS STWDDVVFIPPGFDVSTDPKKQH
Sbjct: 254 ASQDQNQMNPALRPGDVQVAAFEDIIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQH 310

[Close]

BLAST of Sed0019564.1 vs. NCBI nr
Match: XP_022150433.1 (protein TIC 22-like, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 419.9 bits (1078), Expect = 1.8e-113
Identity = 223/296 (75.34%), Postives = 248/296 (83.78%), Query Frame = 0


Query: 6   NGSKP-TQLETHLREALSTFQTHCSGLLHSLSNLP------PFKTHLQS-------PTIS 65
           +G+ P +  E +LR+AL + Q HCSGLLH+LS+LP      PFKTHLQ+         IS
Sbjct: 33  HGNDPNSSFERNLRQALYSLQNHCSGLLHTLSHLPPFNPPLPFKTHLQNQPKRALDSAIS 92

Query: 66  PSDPFPRTPLWARVAAGA--QFAPPVRP--GTALSTKAIEERLAGIPVYALSNAAEEFVL 125
           PSDP  + PLWARVA  A  QF+P  RP    ALST+AIEERLAGIPVYALSN+AEEFVL
Sbjct: 93  PSDPAAKNPLWARVAESATTQFSPSARPAAAAALSTEAIEERLAGIPVYALSNSAEEFVL 152

Query: 126 VSGVSTAKSMGLFCFKKEDAELLLRHVGAVDSSAKNGSKVVAVALNKVFQLHVDGVAFRL 185
           VSG STAKS+GLFCFKKEDAE LL+HVG +D+SA+NGSKVV VALNKVFQLHV+GV FRL
Sbjct: 153 VSGASTAKSLGLFCFKKEDAEALLQHVGMMDASAQNGSKVVPVALNKVFQLHVNGVTFRL 212

Query: 186 VPECSQVKNALNEREKAGISANGFPGVPVFQSKSLILRSQNKSYRPAFFRKEDLENSLKR 245
           VPECSQVKNAL+ER+KAGISA+GF GVPVFQSKSLILRSQNKSYRPAFFRKEDLE SL+R
Sbjct: 213 VPECSQVKNALSERKKAGISADGFSGVPVFQSKSLILRSQNKSYRPAFFRKEDLEKSLQR 272

Query: 246 ASSEQNQINPALRPGDIQVGVFEEIIKGMKDNSNSTWDDVVFIPPGFDVSTDPKKQ 284
           AS EQNQ+NPA RPGDIQV  FEE+IKGMKDNS STWDDVVFIPPGFDVSTDPKKQ
Sbjct: 273 ASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQ 328

[Close]

BLAST of Sed0019564.1 vs. NCBI nr
Match: XP_023005035.1 (protein TIC 22-like, chloroplastic [Cucurbita maxima])

HSP 1 Score: 419.5 bits (1077), Expect = 2.4e-113
Identity = 219/297 (73.74%), Postives = 243/297 (81.82%), Query Frame = 0


Query: 9   KPTQLETHLREALSTFQTHCSGLLHSLSNLPPF------KTHLQS--------------P 68
           KP+QLE +LR+AL+ FQ  CSG+LH+LSNLPPF      K+ LQS               
Sbjct: 62  KPSQLECNLRQALAGFQNQCSGVLHNLSNLPPFNPPLSLKSQLQSTFSSLQNQAKRALDS 121

Query: 69  TISPSDPFPRTPLWARVAAGAQFAPP-VRPGTALSTKAIEERLAGIPVYALSNAAEEFVL 128
            IS  DP  + P+WAR+A  A+   P  RP  ALST+AIEERLAGIPVYALSNA+EEFVL
Sbjct: 122 RISAFDPVAKNPVWARIAETAKTPRPYARPTVALSTEAIEERLAGIPVYALSNASEEFVL 181

Query: 129 VSGVSTAKSMGLFCFKKEDAELLLRHVGAVDSSAKNGSKVVAVALNKVFQLHVDGVAFRL 188
           VSG STAKS+G FCF KEDAE LL H+G VD SA+NGSKVV VALNKVFQLHV+GVAFRL
Sbjct: 182 VSGASTAKSLGFFCFNKEDAETLLGHIGTVDPSAQNGSKVVTVALNKVFQLHVNGVAFRL 241

Query: 189 VPECSQVKNALNEREKAGISANGFPGVPVFQSKSLILRSQNKSYRPAFFRKEDLENSLKR 248
           +PECSQVKNAL+EREKAGIS NGFPGVPVFQSKSLILRS+NKSYRPAFFRKEDLENSLKR
Sbjct: 242 IPECSQVKNALSEREKAGISDNGFPGVPVFQSKSLILRSKNKSYRPAFFRKEDLENSLKR 301

Query: 249 ASSEQNQINPALRPGDIQVGVFEEIIKGMKDNSNSTWDDVVFIPPGFDVSTDPKKQH 285
           AS +QNQ+NPALRPGD+QV  FE+IIKGMKDNS STWDDVVFIPPGFDVSTDPKKQH
Sbjct: 302 ASQDQNQMNPALRPGDVQVAAFEDIIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQH 358

[Close]

BLAST of Sed0019564.1 vs. ExPASy Swiss-Prot
Match: F4J469 (Protein TIC 22-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC22L PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 1.8e-76
Identity = 149/233 (63.95%), Postives = 186/233 (79.83%), Query Frame = 0


Query: 58  RTPLWARVA-----AGAQFAPPVR-PGTALSTKAIEERLAGIPVYALSNAAEEFVLVSGV 117
           + P+WAR++     A AQ   P+R  G  LS  AIEERLAG+PVYALSN+ EEFVLVSG 
Sbjct: 81  KAPVWARISDDGGGARAQVTVPIRGSGKGLSADAIEERLAGVPVYALSNSNEEFVLVSGT 140

Query: 118 STAKSMGLFCFKKEDAELLLRHVGAVD-SSAKNGSKVVAVALNKVFQLHVDGVAFRLVPE 177
           S+ KS+GL   K+EDAE LL+ + ++D    K GSKVVA+AL+KVFQL V+GVAFRL+PE
Sbjct: 141 SSGKSLGLLFCKEEDAETLLKEMKSMDPRMRKEGSKVVALALSKVFQLKVNGVAFRLIPE 200

Query: 178 CSQVKNALNEREKAGISANGFPGVPVFQSKSLILRSQNKSYRPAFFRKEDLENSLKRASS 237
            +QVKNAL ER+ AGI  + F GVPVFQSKSLILRS+N SYRP FFRKEDLE SL RASS
Sbjct: 201 STQVKNALKERKTAGIDDDDFHGVPVFQSKSLILRSENMSYRPVFFRKEDLEKSLIRASS 260

Query: 238 EQNQINPALRPGDIQVGVFEEIIKGMKDNSNSTWDDVVFIPPGFDVSTDPKKQ 284
           +QN++NPAL+PGDIQV VFE+I+KGM++++ S WDD+VFIPPGF+VST+  ++
Sbjct: 261 QQNRLNPALKPGDIQVAVFEDIVKGMRESTTSNWDDIVFIPPGFEVSTEQTQE 313

[Close]

BLAST of Sed0019564.1 vs. ExPASy Swiss-Prot
Match: Q9ZST9 (Protein TIC 22, chloroplastic OS=Pisum sativum OX=3888 GN=TIC22 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.4e-36
Identity = 82/194 (42.27%), Postives = 119/194 (61.34%), Query Frame = 0


Query: 81  LSTKAIEERLAGIPVYALSNAAEEFVLVSGVSTAKSMGLFCFKKEDAELLLRHVGAVDSS 140
           L+   + + LAG  VY +SN+  EFVL+S    AKS+GL CF++EDAE  L  V +    
Sbjct: 53  LTPNHVAKSLAGTSVYTVSNSDNEFVLMSDAEGAKSIGLLCFRQEDAEAFLAQVRSRKKE 112

Query: 141 AKNGSKVVAVALNKVFQLHVDGVAFRLVPECSQVKNALNEREKAGISANGFPGVPVFQSK 200
            + G+KVV + L++V+ L V+G+AFR +P+  Q+KNAL   E    +   F GVPVFQS 
Sbjct: 113 FRGGAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNAL---ELRAANRGSFDGVPVFQSD 172

Query: 201 SLILRSQNKSYRPAFFRKEDLENSLKRASSEQNQINPALRPGDIQVGVFEEIIKGMK-DN 260
            L+++ +NK Y P +F KEDLE  L + S     +  +     I VG FE+++K M+   
Sbjct: 173 LLVVKKKNKRYCPVYFSKEDLEYELSKVSRSSKGVGVSQH---IMVGSFEDVLKKMELSE 232

Query: 261 SNSTWDDVVFIPPG 274
            +S W+D+VFIPPG
Sbjct: 233 KSSGWEDLVFIPPG 240

[Close]

BLAST of Sed0019564.1 vs. ExPASy Swiss-Prot
Match: Q9SZB2 (Protein TIC 22, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC22 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.6e-35
Identity = 85/201 (42.29%), Postives = 122/201 (60.70%), Query Frame = 0


Query: 77  PGTALSTKAIEERLAGIPVYALSNAAEEFVLVSGVSTAKSMGLFCFKKEDAELLLRHVGA 136
           P T LS   + + LAG  V+ +SN   EFVL+S  +  KS+GL CF++EDAE  L     
Sbjct: 66  PTTTLSPSLVAKALAGTSVFTVSNTNNEFVLISDPTGGKSIGLLCFRQEDAEAFLAQARL 125

Query: 137 VDSSAKNGSKVVAVALNKVFQLHVDGVAFRLVPECSQVKNALNEREKAGISANGFPGVPV 196
                K  +KVV + L++V+ L V+G++FR +P+  Q+KNAL E + +G + NGF GVPV
Sbjct: 126 RRRELKTNAKVVPITLDQVYLLKVEGISFRFLPDPIQIKNAL-ELKSSG-NKNGFDGVPV 185

Query: 197 FQSKSLILRSQNKSYRPAFFRKEDLENSLK---RASSEQNQINPALRPGDIQVGVFEEII 256
           FQS+ L++R +N+ Y P +F KED+E  L    RAS    Q         I VG  E+++
Sbjct: 186 FQSELLVVRKKNRRYCPVYFSKEDIERELSKYTRASRGDQQ---------IMVGSLEDVL 245

Query: 257 KGMK-DNSNSTWDDVVFIPPG 274
           + M+    NS W+DV+FIPPG
Sbjct: 246 RKMEMSEKNSGWEDVIFIPPG 255

[Close]

BLAST of Sed0019564.1 vs. ExPASy TrEMBL
Match: A0A6J1H7U6 (protein TIC 22-like, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111460879 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.3e-114
Identity = 221/297 (74.41%), Postives = 244/297 (82.15%), Query Frame = 0


Query: 9   KPTQLETHLREALSTFQTHCSGLLHSLSNLPPF------KTHLQS--------------P 68
           KP+QLE +LR+AL+ FQ  CSG+LH+LSNLPPF      K+ LQS               
Sbjct: 61  KPSQLECNLRQALAGFQNQCSGVLHNLSNLPPFNPPLSLKSQLQSTFSSLQNQAKRALDS 120

Query: 69  TISPSDPFPRTPLWARVAAGAQFAPP-VRPGTALSTKAIEERLAGIPVYALSNAAEEFVL 128
            IS  DP  + P+WAR+A  A+   P  RP  ALST+AIEERLAGIPVYALSNA+EEFVL
Sbjct: 121 RISAFDPVAKNPVWARIAETAKTPRPYARPTVALSTEAIEERLAGIPVYALSNASEEFVL 180

Query: 129 VSGVSTAKSMGLFCFKKEDAELLLRHVGAVDSSAKNGSKVVAVALNKVFQLHVDGVAFRL 188
           VSG STAKS+GLFCF KEDAE LL H+G VD SA+NGSKVV VALNKVFQLHV+GVAFRL
Sbjct: 181 VSGASTAKSLGLFCFNKEDAETLLGHIGTVDPSAQNGSKVVTVALNKVFQLHVNGVAFRL 240

Query: 189 VPECSQVKNALNEREKAGISANGFPGVPVFQSKSLILRSQNKSYRPAFFRKEDLENSLKR 248
           +PECSQVKNAL+EREKAGIS NGFPGVPVFQSKSLILRSQNKSYRPAFFRKEDLENSLKR
Sbjct: 241 IPECSQVKNALSEREKAGISDNGFPGVPVFQSKSLILRSQNKSYRPAFFRKEDLENSLKR 300

Query: 249 ASSEQNQINPALRPGDIQVGVFEEIIKGMKDNSNSTWDDVVFIPPGFDVSTDPKKQH 285
           AS +QNQ+NPALRPGD+QV  FE+IIKGMKDNS STWDDVVFIPPGFDVSTDPKKQH
Sbjct: 301 ASQDQNQMNPALRPGDVQVAAFEDIIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQH 357

[Close]

BLAST of Sed0019564.1 vs. ExPASy TrEMBL
Match: A0A6J1D9F7 (protein TIC 22-like, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018590 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 8.7e-114
Identity = 223/296 (75.34%), Postives = 248/296 (83.78%), Query Frame = 0


Query: 6   NGSKP-TQLETHLREALSTFQTHCSGLLHSLSNLP------PFKTHLQS-------PTIS 65
           +G+ P +  E +LR+AL + Q HCSGLLH+LS+LP      PFKTHLQ+         IS
Sbjct: 33  HGNDPNSSFERNLRQALYSLQNHCSGLLHTLSHLPPFNPPLPFKTHLQNQPKRALDSAIS 92

Query: 66  PSDPFPRTPLWARVAAGA--QFAPPVRP--GTALSTKAIEERLAGIPVYALSNAAEEFVL 125
           PSDP  + PLWARVA  A  QF+P  RP    ALST+AIEERLAGIPVYALSN+AEEFVL
Sbjct: 93  PSDPAAKNPLWARVAESATTQFSPSARPAAAAALSTEAIEERLAGIPVYALSNSAEEFVL 152

Query: 126 VSGVSTAKSMGLFCFKKEDAELLLRHVGAVDSSAKNGSKVVAVALNKVFQLHVDGVAFRL 185
           VSG STAKS+GLFCFKKEDAE LL+HVG +D+SA+NGSKVV VALNKVFQLHV+GV FRL
Sbjct: 153 VSGASTAKSLGLFCFKKEDAEALLQHVGMMDASAQNGSKVVPVALNKVFQLHVNGVTFRL 212

Query: 186 VPECSQVKNALNEREKAGISANGFPGVPVFQSKSLILRSQNKSYRPAFFRKEDLENSLKR 245
           VPECSQVKNAL+ER+KAGISA+GF GVPVFQSKSLILRSQNKSYRPAFFRKEDLE SL+R
Sbjct: 213 VPECSQVKNALSERKKAGISADGFSGVPVFQSKSLILRSQNKSYRPAFFRKEDLEKSLQR 272

Query: 246 ASSEQNQINPALRPGDIQVGVFEEIIKGMKDNSNSTWDDVVFIPPGFDVSTDPKKQ 284
           AS EQNQ+NPA RPGDIQV  FEE+IKGMKDNS STWDDVVFIPPGFDVSTDPKKQ
Sbjct: 273 ASREQNQVNPAFRPGDIQVAGFEEVIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQ 328

[Close]

BLAST of Sed0019564.1 vs. ExPASy TrEMBL
Match: A0A6J1KWA0 (protein TIC 22-like, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111498148 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 1.1e-113
Identity = 219/297 (73.74%), Postives = 243/297 (81.82%), Query Frame = 0


Query: 9   KPTQLETHLREALSTFQTHCSGLLHSLSNLPPF------KTHLQS--------------P 68
           KP+QLE +LR+AL+ FQ  CSG+LH+LSNLPPF      K+ LQS               
Sbjct: 62  KPSQLECNLRQALAGFQNQCSGVLHNLSNLPPFNPPLSLKSQLQSTFSSLQNQAKRALDS 121

Query: 69  TISPSDPFPRTPLWARVAAGAQFAPP-VRPGTALSTKAIEERLAGIPVYALSNAAEEFVL 128
            IS  DP  + P+WAR+A  A+   P  RP  ALST+AIEERLAGIPVYALSNA+EEFVL
Sbjct: 122 RISAFDPVAKNPVWARIAETAKTPRPYARPTVALSTEAIEERLAGIPVYALSNASEEFVL 181

Query: 129 VSGVSTAKSMGLFCFKKEDAELLLRHVGAVDSSAKNGSKVVAVALNKVFQLHVDGVAFRL 188
           VSG STAKS+G FCF KEDAE LL H+G VD SA+NGSKVV VALNKVFQLHV+GVAFRL
Sbjct: 182 VSGASTAKSLGFFCFNKEDAETLLGHIGTVDPSAQNGSKVVTVALNKVFQLHVNGVAFRL 241

Query: 189 VPECSQVKNALNEREKAGISANGFPGVPVFQSKSLILRSQNKSYRPAFFRKEDLENSLKR 248
           +PECSQVKNAL+EREKAGIS NGFPGVPVFQSKSLILRS+NKSYRPAFFRKEDLENSLKR
Sbjct: 242 IPECSQVKNALSEREKAGISDNGFPGVPVFQSKSLILRSKNKSYRPAFFRKEDLENSLKR 301

Query: 249 ASSEQNQINPALRPGDIQVGVFEEIIKGMKDNSNSTWDDVVFIPPGFDVSTDPKKQH 285
           AS +QNQ+NPALRPGD+QV  FE+IIKGMKDNS STWDDVVFIPPGFDVSTDPKKQH
Sbjct: 302 ASQDQNQMNPALRPGDVQVAAFEDIIKGMKDNSISTWDDVVFIPPGFDVSTDPKKQH 358

[Close]

BLAST of Sed0019564.1 vs. ExPASy TrEMBL
Match: A0A5D3BU87 (Protein TIC 22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold128G00260 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 1.1e-105
Identity = 211/297 (71.04%), Postives = 236/297 (79.46%), Query Frame = 0


Query: 6   NGSKPTQLETHLREALSTFQTHCSGLLHSLSNLPPFKTHLQS---------------PTI 65
           +G+ P     +L +AL++FQ HCS LLH+LSN  P KT LQS                TI
Sbjct: 4   HGNDPISSFLNLPQALNSFQNHCSTLLHNLSNPLPLKTQLQSTFSTLLNPKPNPPLHSTI 63

Query: 66  SPSDPFP-RTPLWARV--AAGAQFAPPVRPG-TALSTKAIEERLAGIPVYALSNAAEEFV 125
           SPSD  P + PLWAR+   A  QF+ P  P   +LST+AIEERLAGIPVYALSNA+EEFV
Sbjct: 64  SPSDSVPNKNPLWARLPETAKTQFSRPSSPSPLSLSTEAIEERLAGIPVYALSNASEEFV 123

Query: 126 LVSGVSTAKSMGLFCFKKEDAELLLRHVGAVDSSAKNGSKVVAVALNKVFQLHVDGVAFR 185
           LVSG ST KS+G FCFKK+DAE LL+H+G +D SA  GSKVV VALNKVFQLHV+GVAFR
Sbjct: 124 LVSGASTQKSLGFFCFKKDDAETLLQHIGTMDPSAHYGSKVVPVALNKVFQLHVNGVAFR 183

Query: 186 LVPECSQVKNALNEREKAGISANGFPGVPVFQSKSLILRSQNKSYRPAFFRKEDLENSLK 245
           L+PECSQVKNAL ER+KAGISA+ F GVPVFQSKSL+LRSQNKSYRPAFFRKEDLENSL+
Sbjct: 184 LIPECSQVKNALTERKKAGISADEFSGVPVFQSKSLVLRSQNKSYRPAFFRKEDLENSLQ 243

Query: 246 RASSEQNQINPALRPGDIQVGVFEEIIKGMKDNSNSTWDDVVFIPPGFDVSTDPKKQ 284
            A  EQNQINPALRPGDIQV VFEEIIKGMKDNS STWDD+VFIPPGFDVSTDPKKQ
Sbjct: 244 SACREQNQINPALRPGDIQVAVFEEIIKGMKDNSISTWDDIVFIPPGFDVSTDPKKQ 300

[Close]

BLAST of Sed0019564.1 vs. ExPASy TrEMBL
Match: A0A1S3CLN7 (protein TIC 22-like, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502243 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 1.1e-105
Identity = 211/297 (71.04%), Postives = 236/297 (79.46%), Query Frame = 0


Query: 6   NGSKPTQLETHLREALSTFQTHCSGLLHSLSNLPPFKTHLQS---------------PTI 65
           +G+ P     +L +AL++FQ HCS LLH+LSN  P KT LQS                TI
Sbjct: 4   HGNDPISSFLNLPQALNSFQNHCSTLLHNLSNPLPLKTQLQSTFSTLLNPKPNPPLHSTI 63

Query: 66  SPSDPFP-RTPLWARV--AAGAQFAPPVRPG-TALSTKAIEERLAGIPVYALSNAAEEFV 125
           SPSD  P + PLWAR+   A  QF+ P  P   +LST+AIEERLAGIPVYALSNA+EEFV
Sbjct: 64  SPSDSVPNKNPLWARLPETAKTQFSRPSSPSPLSLSTEAIEERLAGIPVYALSNASEEFV 123

Query: 126 LVSGVSTAKSMGLFCFKKEDAELLLRHVGAVDSSAKNGSKVVAVALNKVFQLHVDGVAFR 185
           LVSG ST KS+G FCFKK+DAE LL+H+G +D SA  GSKVV VALNKVFQLHV+GVAFR
Sbjct: 124 LVSGASTQKSLGFFCFKKDDAETLLQHIGTMDPSAHYGSKVVPVALNKVFQLHVNGVAFR 183

Query: 186 LVPECSQVKNALNEREKAGISANGFPGVPVFQSKSLILRSQNKSYRPAFFRKEDLENSLK 245
           L+PECSQVKNAL ER+KAGISA+ F GVPVFQSKSL+LRSQNKSYRPAFFRKEDLENSL+
Sbjct: 184 LIPECSQVKNALTERKKAGISADEFSGVPVFQSKSLVLRSQNKSYRPAFFRKEDLENSLQ 243

Query: 246 RASSEQNQINPALRPGDIQVGVFEEIIKGMKDNSNSTWDDVVFIPPGFDVSTDPKKQ 284
            A  EQNQINPALRPGDIQV VFEEIIKGMKDNS STWDD+VFIPPGFDVSTDPKKQ
Sbjct: 244 SACREQNQINPALRPGDIQVAVFEEIIKGMKDNSISTWDDIVFIPPGFDVSTDPKKQ 300

[Close]

BLAST of Sed0019564.1 vs. TAIR 10
Match: AT3G23710.1 (Tic22-like family protein )

HSP 1 Score: 287.3 bits (734), Expect = 1.3e-77
Identity = 149/233 (63.95%), Postives = 186/233 (79.83%), Query Frame = 0


Query: 58  RTPLWARVA-----AGAQFAPPVR-PGTALSTKAIEERLAGIPVYALSNAAEEFVLVSGV 117
           + P+WAR++     A AQ   P+R  G  LS  AIEERLAG+PVYALSN+ EEFVLVSG 
Sbjct: 81  KAPVWARISDDGGGARAQVTVPIRGSGKGLSADAIEERLAGVPVYALSNSNEEFVLVSGT 140

Query: 118 STAKSMGLFCFKKEDAELLLRHVGAVD-SSAKNGSKVVAVALNKVFQLHVDGVAFRLVPE 177
           S+ KS+GL   K+EDAE LL+ + ++D    K GSKVVA+AL+KVFQL V+GVAFRL+PE
Sbjct: 141 SSGKSLGLLFCKEEDAETLLKEMKSMDPRMRKEGSKVVALALSKVFQLKVNGVAFRLIPE 200

Query: 178 CSQVKNALNEREKAGISANGFPGVPVFQSKSLILRSQNKSYRPAFFRKEDLENSLKRASS 237
            +QVKNAL ER+ AGI  + F GVPVFQSKSLILRS+N SYRP FFRKEDLE SL RASS
Sbjct: 201 STQVKNALKERKTAGIDDDDFHGVPVFQSKSLILRSENMSYRPVFFRKEDLEKSLIRASS 260

Query: 238 EQNQINPALRPGDIQVGVFEEIIKGMKDNSNSTWDDVVFIPPGFDVSTDPKKQ 284
           +QN++NPAL+PGDIQV VFE+I+KGM++++ S WDD+VFIPPGF+VST+  ++
Sbjct: 261 QQNRLNPALKPGDIQVAVFEDIVKGMRESTTSNWDDIVFIPPGFEVSTEQTQE 313

[Close]

BLAST of Sed0019564.1 vs. TAIR 10
Match: AT4G33350.1 (Tic22-like family protein )

HSP 1 Score: 151.4 bits (381), Expect = 1.1e-36
Identity = 85/201 (42.29%), Postives = 122/201 (60.70%), Query Frame = 0


Query: 77  PGTALSTKAIEERLAGIPVYALSNAAEEFVLVSGVSTAKSMGLFCFKKEDAELLLRHVGA 136
           P T LS   + + LAG  V+ +SN   EFVL+S  +  KS+GL CF++EDAE  L     
Sbjct: 66  PTTTLSPSLVAKALAGTSVFTVSNTNNEFVLISDPTGGKSIGLLCFRQEDAEAFLAQARL 125

Query: 137 VDSSAKNGSKVVAVALNKVFQLHVDGVAFRLVPECSQVKNALNEREKAGISANGFPGVPV 196
                K  +KVV + L++V+ L V+G++FR +P+  Q+KNAL E + +G + NGF GVPV
Sbjct: 126 RRRELKTNAKVVPITLDQVYLLKVEGISFRFLPDPIQIKNAL-ELKSSG-NKNGFDGVPV 185

Query: 197 FQSKSLILRSQNKSYRPAFFRKEDLENSLK---RASSEQNQINPALRPGDIQVGVFEEII 256
           FQS+ L++R +N+ Y P +F KED+E  L    RAS    Q         I VG  E+++
Sbjct: 186 FQSELLVVRKKNRRYCPVYFSKEDIERELSKYTRASRGDQQ---------IMVGSLEDVL 245

Query: 257 KGMK-DNSNSTWDDVVFIPPG 274
           + M+    NS W+DV+FIPPG
Sbjct: 246 RKMEMSEKNSGWEDVIFIPPG 255

[Close]

BLAST of Sed0019564.1 vs. TAIR 10
Match: AT4G33350.2 (Tic22-like family protein )

HSP 1 Score: 127.9 bits (320), Expect = 1.3e-29
Identity = 74/198 (37.37%), Postives = 109/198 (55.05%), Query Frame = 0


Query: 77  PGTALSTKAIEERLAGIPVYALSNAAEEFVLVSGVSTAKSMGLFCFKKEDAELLLRHVGA 136
           P T LS   + + LAG  V+ +SN   EFVL+S  +  KS+GL CF++EDAE  L     
Sbjct: 66  PTTTLSPSLVAKALAGTSVFTVSNTNNEFVLISDPTGGKSIGLLCFRQEDAEAFLAQARL 125

Query: 137 VDSSAKNGSKVVAVALNKVFQLHVDGVAFRLVPECSQVKNALNEREKAGISANGFPGVPV 196
                K  +KVV + L++V+ L V+G++FR +P+  Q+KNAL E + +G + NGF GVPV
Sbjct: 126 RRRELKTNAKVVPITLDQVYLLKVEGISFRFLPDPIQIKNAL-ELKSSG-NKNGFDGVPV 185

Query: 197 FQSKSLILRSQNKSYRPAFFRKEDLENSLKRASSEQNQINPALRPGDIQVGVFEEIIKGM 256
           FQS+ L++R +N+ Y P                                VG  E++++ M
Sbjct: 186 FQSELLVVRKKNRRYCP--------------------------------VGSLEDVLRKM 229

Query: 257 K-DNSNSTWDDVVFIPPG 274
           +    NS W+DV+FIPPG
Sbjct: 246 EMSEKNSGWEDVIFIPPG 229

The following BLAST results are available for this feature:

BLAST of Sed0019564.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959990.1	2.8e-114	74.41	protein TIC 22-like, chloroplastic [Cucurbita moschata]	[more]
XP_023514114.1	4.8e-114	74.07	protein TIC 22-like, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
KAG7025300.1	8.1e-114	74.07	Protein TIC 22-like, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022150433.1	1.8e-113	75.34	protein TIC 22-like, chloroplastic isoform X1 [Momordica charantia]	[more]
XP_023005035.1	2.4e-113	73.74	protein TIC 22-like, chloroplastic [Cucurbita maxima]	[more]

BLAST of Sed0019564.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4J469	1.8e-76	63.95	Protein TIC 22-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC22L PE=...	[more]
Q9ZST9	2.4e-36	42.27	Protein TIC 22, chloroplastic OS=Pisum sativum OX=3888 GN=TIC22 PE=1 SV=1	[more]
Q9SZB2	1.6e-35	42.29	Protein TIC 22, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC22 PE=1 SV=1	[more]

BLAST of Sed0019564.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H7U6	1.3e-114	74.41	protein TIC 22-like, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111460879...	[more]
A0A6J1D9F7	8.7e-114	75.34	protein TIC 22-like, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1KWA0	1.1e-113	73.74	protein TIC 22-like, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111498148 P...	[more]
A0A5D3BU87	1.1e-105	71.04	Protein TIC 22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold128G...	[more]
A0A1S3CLN7	1.1e-105	71.04	protein TIC 22-like, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]

BLAST of Sed0019564.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23710.1	1.3e-77	63.95	Tic22-like family protein	[more]
AT4G33350.1	1.1e-36	42.29	Tic22-like family protein	[more]
AT4G33350.2	1.3e-29	37.37	Tic22-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.1350.100		coord: 85..168 e-value: 1.2E-15 score: 59.8
None	No IPR available	GENE3D	3.40.1350.100		coord: 169..238 e-value: 1.2E-15 score: 59.8
None	No IPR available	PANTHER	PTHR33926:SF1	PROTEIN TIC 22-LIKE, CHLOROPLASTIC	coord: 13..282
IPR007378	Tic22-like	PFAM	PF04278	Tic22	coord: 26..279 e-value: 4.2E-83 score: 278.4
IPR007378	Tic22-like	PANTHER	PTHR33926	PROTEIN TIC 22, CHLOROPLASTIC	coord: 13..282

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0019564	Sed0019564	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0019564.1-three_prime_utr	Sed0019564.1-three_prime_utr-LG09:4934267..4934400	three_prime_UTR
Sed0019564.1-three_prime_utr	Sed0019564.1-three_prime_utr-LG09:4935213..4935309	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0019564.1-exon	Sed0019564.1-exon-LG09:4934267..4934400	exon
Sed0019564.1-exon	Sed0019564.1-exon-LG09:4935213..4935393	exon
Sed0019564.1-exon	Sed0019564.1-exon-LG09:4936042..4936077	exon
Sed0019564.1-exon	Sed0019564.1-exon-LG09:4936163..4936243	exon
Sed0019564.1-exon	Sed0019564.1-exon-LG09:4936318..4936377	exon
Sed0019564.1-exon	Sed0019564.1-exon-LG09:4939167..4939223	exon
Sed0019564.1-exon	Sed0019564.1-exon-LG09:4940522..4940596	exon
Sed0019564.1-exon	Sed0019564.1-exon-LG09:4940680..4941199	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0019564.1-cds	Sed0019564.1-cds-LG09:4935310..4935393	CDS
Sed0019564.1-cds	Sed0019564.1-cds-LG09:4936042..4936077	CDS
Sed0019564.1-cds	Sed0019564.1-cds-LG09:4936163..4936243	CDS
Sed0019564.1-cds	Sed0019564.1-cds-LG09:4936318..4936377	CDS
Sed0019564.1-cds	Sed0019564.1-cds-LG09:4939167..4939223	CDS
Sed0019564.1-cds	Sed0019564.1-cds-LG09:4940522..4940596	CDS
Sed0019564.1-cds	Sed0019564.1-cds-LG09:4940680..4941141	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0019564.1-five_prime_utr	Sed0019564.1-five_prime_utr-LG09:4941142..4941199	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0019564.1	Sed0019564.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0009507	chloroplast