Sed0019560.1 (mRNA) Chayote v1

Overview


Name	Sed0019560.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Dirigent protein
Location	LG12: 9587078 .. 9587968 (-)
Sequence length	891
RNA-Seq Expression	Sed0019560.1
Synteny	Sed0019560.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAAAAAAAAAAAAGAACTCCAAAAATAAAATTTAAAACTCCATAAATAAACCCCATCACAAAAACGCCATTGCCCATTCCCTTCCATATCCAATGGCTACAACCCTCTTCCGAAAACGCTCCGCCGCCTCCACCTTCGCAGCGGCGGCGATTTTCTCAGCACTCCTCGTCACCTCCGCCACGGCCTTGGTGAGGCCCATCCTGTCACCGGAGAAGGTCGGCCTCGGAGGGCGGCGAGAGAAGCTGAGCCACCTCCACTTCTACTTCCACGACACCGTCAGCGGGCGGGACCCGACGGCGGTGGCGGTGGTAGCGGCGGCGAACGGGTCAAGCAGCCTATTCGGCACGGTGGTGGTTATTGACGATCCGCTGACGGTGGGGCCGGAAACGGGGTCGAAATTGGTGGGAAGGGCGCAAGGGGTGTACGGCGGGGCCTCGCAAACGGAAATCGGGCTGTTAATGGTCATGAATTTTGCGTTTGTGGAGGGCAAGTACAACGGGAGTTATTTGAGCATTTTGGGGCGGAACACGGTGGCCTCCGCCGTGAGAGAGATGCCGGTCGTCGGCGGCGGTGGGCTTTTCCGATTTGCTCGTGGCTATGCCCAGGCTAACACTCACACCTTTAATTACACCACTGGGAACGCCGTTGTGGAGTATAACGTCTACGTCTTCCATTATTGATCACTTTCTCAACAACACCCTTGTTTATGTTTCCAAACAGTATTTGAGAATTGAAAATTATTATTTTTTTCTATTTTTAATTTCTGTAATTTTTAAATGTTTATTTAAAGTTTCGGGTGTTTGTTTGTCATGTTTATAGAATATATAAAAGGAGTATTTACTAATTATTTCTAAGAACAAAATTATATTTAGATTAGTTTTGGTAATTA

mRNA sequence

AATAAAAAAAAAAAAGAACTCCAAAAATAAAATTTAAAACTCCATAAATAAACCCCATCACAAAAACGCCATTGCCCATTCCCTTCCATATCCAATGGCTACAACCCTCTTCCGAAAACGCTCCGCCGCCTCCACCTTCGCAGCGGCGGCGATTTTCTCAGCACTCCTCGTCACCTCCGCCACGGCCTTGGTGAGGCCCATCCTGTCACCGGAGAAGGTCGGCCTCGGAGGGCGGCGAGAGAAGCTGAGCCACCTCCACTTCTACTTCCACGACACCGTCAGCGGGCGGGACCCGACGGCGGTGGCGGTGGTAGCGGCGGCGAACGGGTCAAGCAGCCTATTCGGCACGGTGGTGGTTATTGACGATCCGCTGACGGTGGGGCCGGAAACGGGGTCGAAATTGGTGGGAAGGGCGCAAGGGGTGTACGGCGGGGCCTCGCAAACGGAAATCGGGCTGTTAATGGTCATGAATTTTGCGTTTGTGGAGGGCAAGTACAACGGGAGTTATTTGAGCATTTTGGGGCGGAACACGGTGGCCTCCGCCGTGAGAGAGATGCCGGTCGTCGGCGGCGGTGGGCTTTTCCGATTTGCTCGTGGCTATGCCCAGGCTAACACTCACACCTTTAATTACACCACTGGGAACGCCGTTGTGGAGTATAACGTCTACGTCTTCCATTATTGATCACTTTCTCAACAACACCCTTGTTTATGTTTCCAAACAGTATTTGAGAATTGAAAATTATTATTTTTTTCTATTTTTAATTTCTGTAATTTTTAAATGTTTATTTAAAGTTTCGGGTGTTTGTTTGTCATGTTTATAGAATATATAAAAGGAGTATTTACTAATTATTTCTAAGAACAAAATTATATTTAGATTAGTTTTGGTAATTA

Coding sequence (CDS)

ATGGCTACAACCCTCTTCCGAAAACGCTCCGCCGCCTCCACCTTCGCAGCGGCGGCGATTTTCTCAGCACTCCTCGTCACCTCCGCCACGGCCTTGGTGAGGCCCATCCTGTCACCGGAGAAGGTCGGCCTCGGAGGGCGGCGAGAGAAGCTGAGCCACCTCCACTTCTACTTCCACGACACCGTCAGCGGGCGGGACCCGACGGCGGTGGCGGTGGTAGCGGCGGCGAACGGGTCAAGCAGCCTATTCGGCACGGTGGTGGTTATTGACGATCCGCTGACGGTGGGGCCGGAAACGGGGTCGAAATTGGTGGGAAGGGCGCAAGGGGTGTACGGCGGGGCCTCGCAAACGGAAATCGGGCTGTTAATGGTCATGAATTTTGCGTTTGTGGAGGGCAAGTACAACGGGAGTTATTTGAGCATTTTGGGGCGGAACACGGTGGCCTCCGCCGTGAGAGAGATGCCGGTCGTCGGCGGCGGTGGGCTTTTCCGATTTGCTCGTGGCTATGCCCAGGCTAACACTCACACCTTTAATTACACCACTGGGAACGCCGTTGTGGAGTATAACGTCTACGTCTTCCATTATTGA

Protein sequence

MATTLFRKRSAASTFAAAAIFSALLVTSATALVRPILSPEKVGLGGRREKLSHLHFYFHDTVSGRDPTAVAVVAAANGSSSLFGTVVVIDDPLTVGPETGSKLVGRAQGVYGGASQTEIGLLMVMNFAFVEGKYNGSYLSILGRNTVASAVREMPVVGGGGLFRFARGYAQANTHTFNYTTGNAVVEYNVYVFHY

Homology

[Close]

BLAST of Sed0019560.1 vs. NCBI nr
Match: XP_023527247.1 (dirigent protein 22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.2 bits (674), Expect = 8.7e-67
Identity = 146/197 (74.11%), Postives = 158/197 (80.20%), Query Frame = 0


Query: 1   MATTLFRKRSAASTFAAAAIFSALLVTSATALVRPILSPEKVGLGGRREKLSHLHFYFHD 60
           MA T    RSAA    AAA+F +L +TSA A   P+LS EK+GL  RREKLSHLHFYFHD
Sbjct: 1   MAPTFISNRSAA---VAAAVFFSLFLTSALAAAEPVLSLEKLGL-RRREKLSHLHFYFHD 60

Query: 61  TVSGRDPTAVAVV--AAANGSSSLFGTVVVIDDPLTVGPETGSKLVGRAQGVYGGASQTE 120
            VSGR+PTAV VV    AN S SLFG VV+ DDPLT  PE GSKL+GR QG Y  ASQTE
Sbjct: 61  IVSGRNPTAVPVVLPPQANASRSLFGMVVMTDDPLTERPEIGSKLLGRVQGFYASASQTE 120

Query: 121 IGLLMVMNFAFVEGKYNGSYLSILGRNTVASAVREMPVVGGGGLFRFARGYAQANTHTFN 180
           +G LMVMNFAFVEGKYNGSYLSILGRNTV SAVREMPVVGGGGLFRFARGYAQA T+T N
Sbjct: 121 LGFLMVMNFAFVEGKYNGSYLSILGRNTVMSAVREMPVVGGGGLFRFARGYAQAKTYTVN 180

Query: 181 YTTGNAVVEYNVYVFHY 196
           Y+TG+AVVEYNVYVFHY
Sbjct: 181 YSTGDAVVEYNVYVFHY 193

[Close]

BLAST of Sed0019560.1 vs. NCBI nr
Match: KAG6580789.1 (Dirigent protein 20, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017539.1 Dirigent protein 20, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 261.9 bits (668), Expect = 4.3e-66
Identity = 145/197 (73.60%), Postives = 158/197 (80.20%), Query Frame = 0


Query: 1   MATTLFRKRSAASTFAAAAIFSALLVTSATALVRPILSPEKVGLGGRREKLSHLHFYFHD 60
           MA T    RSAA    AAA+F +L +TSA A   P+LS EK+GL  RREKLSHLHFYFHD
Sbjct: 1   MAPTFIANRSAA---VAAAVFFSLFLTSAFAAAEPVLSLEKLGL-RRREKLSHLHFYFHD 60

Query: 61  TVSGRDPTAVAVV--AAANGSSSLFGTVVVIDDPLTVGPETGSKLVGRAQGVYGGASQTE 120
            VSGR+PTAV VV    AN S SLFG VV+ DDPLT  PE GSKL+GR QG Y  ASQTE
Sbjct: 61  IVSGRNPTAVPVVLPPQANASRSLFGMVVMTDDPLTERPEIGSKLLGRVQGFYASASQTE 120

Query: 121 IGLLMVMNFAFVEGKYNGSYLSILGRNTVASAVREMPVVGGGGLFRFARGYAQANTHTFN 180
           +G LMVMNFAFVEGKYNGSYLSILGRNTV SAVREMPVVGGGGLFRFARGYAQA T+T +
Sbjct: 121 LGFLMVMNFAFVEGKYNGSYLSILGRNTVMSAVREMPVVGGGGLFRFARGYAQAKTYTVD 180

Query: 181 YTTGNAVVEYNVYVFHY 196
           Y+TG+AVVEYNVYVFHY
Sbjct: 181 YSTGDAVVEYNVYVFHY 193

[Close]

BLAST of Sed0019560.1 vs. NCBI nr
Match: XP_022934301.1 (dirigent protein 22-like [Cucurbita moschata])

HSP 1 Score: 261.9 bits (668), Expect = 4.3e-66
Identity = 145/197 (73.60%), Postives = 157/197 (79.70%), Query Frame = 0


Query: 1   MATTLFRKRSAASTFAAAAIFSALLVTSATALVRPILSPEKVGLGGRREKLSHLHFYFHD 60
           MA T    RSAA    AAA+F +L +TSA A   P+LS EK+GL  RREKLSHLHFYFHD
Sbjct: 1   MAPTFIANRSAA---VAAAVFFSLFLTSAFAAAEPVLSLEKLGL-RRREKLSHLHFYFHD 60

Query: 61  TVSGRDPTAVAVV--AAANGSSSLFGTVVVIDDPLTVGPETGSKLVGRAQGVYGGASQTE 120
            VSGR+PTAV VV    AN S SLFG VV+ DDPLT  PE GSKL+GR QG Y  ASQTE
Sbjct: 61  IVSGRNPTAVPVVLPPQANASRSLFGMVVMTDDPLTERPEIGSKLLGRVQGFYASASQTE 120

Query: 121 IGLLMVMNFAFVEGKYNGSYLSILGRNTVASAVREMPVVGGGGLFRFARGYAQANTHTFN 180
           +G LMVMNFAFVEGKYNGSYLSILGRNTV S VREMPVVGGGGLFRFARGYAQA T+T N
Sbjct: 121 LGFLMVMNFAFVEGKYNGSYLSILGRNTVMSPVREMPVVGGGGLFRFARGYAQAKTYTVN 180

Query: 181 YTTGNAVVEYNVYVFHY 196
           Y+TG+AVVEYNVYVFHY
Sbjct: 181 YSTGDAVVEYNVYVFHY 193

[Close]

BLAST of Sed0019560.1 vs. NCBI nr
Match: XP_022983112.1 (dirigent protein 22-like [Cucurbita maxima])

HSP 1 Score: 261.2 bits (666), Expect = 7.4e-66
Identity = 145/197 (73.60%), Postives = 160/197 (81.22%), Query Frame = 0


Query: 1   MATTLFRKRSAASTFAAAAIFSALLVTSATALVRPILSPEKVGLGGRREKLSHLHFYFHD 60
           MA T    RSAA    AAA+  +L +TSA A  +P+LS EK+GL  RREKLSHLHFYFHD
Sbjct: 1   MAPTFIPNRSAA---VAAALCFSLFLTSALAAAKPVLSLEKLGL-RRREKLSHLHFYFHD 60

Query: 61  TVSGRDPTAVAVV--AAANGSSSLFGTVVVIDDPLTVGPETGSKLVGRAQGVYGGASQTE 120
            +SGR+PTAV VV    AN S SLFG VV+ DDPLT  PE GSKL+GRAQG Y  ASQTE
Sbjct: 61  ILSGRNPTAVPVVLPPQANASRSLFGMVVMTDDPLTERPEIGSKLLGRAQGFYASASQTE 120

Query: 121 IGLLMVMNFAFVEGKYNGSYLSILGRNTVASAVREMPVVGGGGLFRFARGYAQANTHTFN 180
           +GLLMVMNFAFVEGKYNGSYLSILGRNTV SAVREMPVVGGGGLFRFARGYAQA T+T +
Sbjct: 121 LGLLMVMNFAFVEGKYNGSYLSILGRNTVMSAVREMPVVGGGGLFRFARGYAQAKTYTVD 180

Query: 181 YTTGNAVVEYNVYVFHY 196
           Y+TG+AVVEYNVYVFHY
Sbjct: 181 YSTGDAVVEYNVYVFHY 193

[Close]

BLAST of Sed0019560.1 vs. NCBI nr
Match: XP_038905141.1 (dirigent protein 22-like [Benincasa hispida])

HSP 1 Score: 254.6 bits (649), Expect = 6.9e-64
Identity = 136/180 (75.56%), Postives = 150/180 (83.33%), Query Frame = 0


Query: 17  AAAIFSALLVTSATALVRPILSPEKVGLGGRREKLSHLHFYFHDTVSGRDPTAVAVV-AA 76
           AAAI  +L + SA     P+LSPEK+G+  RREKLSHLHFYFHD VSGR+PTAV VV   
Sbjct: 10  AAAISFSLFLISALVASDPVLSPEKLGI-RRREKLSHLHFYFHDIVSGRNPTAVFVVPPP 69

Query: 77  ANGSSSLFGTVVVIDDPLTVGPETGSKLVGRAQGVYGGASQTEIGLLMVMNFAFVEGKYN 136
           +N S +LFG+VV+ DDPLT  PE GSKL+GRAQG Y GASQTEIG LMVMNFAFVEGKYN
Sbjct: 70  SNASRTLFGSVVMTDDPLTERPEIGSKLLGRAQGFYAGASQTEIGFLMVMNFAFVEGKYN 129

Query: 137 GSYLSILGRNTVASAVREMPVVGGGGLFRFARGYAQANTHTFNYTTGNAVVEYNVYVFHY 196
           GSYLSILGRNTV SAVREMPVVGGGGLFRFARGYAQA TH  N ++G+AVVEYNVYVFHY
Sbjct: 130 GSYLSILGRNTVFSAVREMPVVGGGGLFRFARGYAQAKTHAVNISSGDAVVEYNVYVFHY 188

[Close]

BLAST of Sed0019560.1 vs. ExPASy Swiss-Prot
Match: A0A1V1FH01 (Pterocarpan synthase 1 OS=Glycyrrhiza echinata OX=46348 GN=PTS1 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.7e-44
Identity = 101/188 (53.72%), Postives = 133/188 (70.74%), Query Frame = 0


Query: 12  ASTFAAAAIFSALLVTSATALVRPILSPEKVGLGGRREKLSHLHFYFHDTVSGRDPTAVA 71
           ++TF  +     LL++  TA     +SP    LG + EK +HLHFYFHD V+G  P+ V 
Sbjct: 4   STTFFISLTLPFLLLSVVTATYYQSMSP--TVLGFQEEKFTHLHFYFHDVVTGPKPSMV- 63

Query: 72  VVAAANG---SSSLFGTVVVIDDPLTVGPETGSKLVGRAQGVYGGASQTEIGLLMVMNFA 131
           +VA  NG   +S  FGTVV +DDPLTVGPE+ SKLVG+AQG+Y   SQ E+GL+MVM  A
Sbjct: 64  IVAEPNGKAKNSLPFGTVVAMDDPLTVGPESDSKLVGKAQGIYTSISQEEMGLMMVMTMA 123

Query: 132 FVEGKYNGSYLSILGRNTVAS-AVREMPVVGGGGLFRFARGYAQANTHTFNYTTGNAVVE 191
           F +G++NGS LSIL RN + S  VREM +VGG G FRFARGYAQA  ++ ++T G+A+VE
Sbjct: 124 FSDGEFNGSTLSILARNMIMSEPVREMAIVGGTGAFRFARGYAQAKFYSVDFTKGDAIVE 183

Query: 192 YNVYVFHY 196
           Y+++VFHY
Sbjct: 184 YDIFVFHY 188

[Close]

BLAST of Sed0019560.1 vs. ExPASy Swiss-Prot
Match: Q9C523 (Dirigent protein 19 OS=Arabidopsis thaliana OX=3702 GN=DIR19 PE=2 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.1e-43
Identity = 94/183 (51.37%), Postives = 130/183 (71.04%), Query Frame = 0


Query: 19  AIFSALLVTSAT-ALVRPILSPEKVG---LGGRREKLSHLHFYFHDTVSGRDPTAVAVVA 78
           +  S  L++S T ALV   ++ E +    L  ++EKL+H   Y+HD V+G+D ++V+++ 
Sbjct: 3   SFLSFFLISSRTLALVLISVTGETLESNFLHHKKEKLTHFRVYWHDIVTGQDSSSVSIMN 62

Query: 79  AAN--GSSSLFGTVVVIDDPLTVGPETGSKLVGRAQGVYGGASQTEIGLLMVMNFAFVEG 138
                  ++ FG + +ID+PLT+ P+  SK+VGRAQG Y G S+ EIGLLM MNFA ++G
Sbjct: 63  PPKKYTGATGFGLMRMIDNPLTLTPKLSSKMVGRAQGFYAGTSKEEIGLLMAMNFAILDG 122

Query: 139 KYNGSYLSILGRNTVASAVREMPVVGGGGLFRFARGYAQANTHTFNYTTGNAVVEYNVYV 196
           KYNGS +++LGRN+V   VREMPV+GG GLFRFARGY QA+TH FN  TGNA+VEYN Y+
Sbjct: 123 KYNGSTITVLGRNSVFDKVREMPVIGGSGLFRFARGYVQASTHEFNLKTGNAIVEYNCYL 182

[Close]

BLAST of Sed0019560.1 vs. ExPASy Swiss-Prot
Match: Q9SS03 (Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.0e-41
Identity = 90/178 (50.56%), Postives = 119/178 (66.85%), Query Frame = 0


Query: 19  AIFSALLVTSATALVRPILSPEKVGLGGRREKLSHLHFYFHDTVSGRDPTAVAVV--AAA 78
           A+  A  +T + +    + +P     G + +KL+HLHFYFHD VSG  PT+V V      
Sbjct: 15  ALILAATITESKSFSTTVKAPYP---GHKPDKLTHLHFYFHDIVSGDKPTSVQVANGPTT 74

Query: 79  NGSSSLFGTVVVIDDPLTVGPETGSKLVGRAQGVYGGASQTEIGLLMVMNFAFVEGKYNG 138
           N S++ FG V V+DD LTVGPE  S+ VGRAQG+Y  A Q ++GLLM  N  F +GK++ 
Sbjct: 75  NSSATGFGLVAVVDDKLTVGPEITSEEVGRAQGMYASADQNKLGLLMAFNLVFTKGKFSD 134

Query: 139 SYLSILGRNTVASAVREMPVVGGGGLFRFARGYAQANTHTFNYTTGNAVVEYNVYVFH 195
           S +++ GRN V S VREMP++GG G FRF RGYA A T  FN T+G+AVVEYNVY++H
Sbjct: 135 STVAMYGRNPVLSKVREMPIIGGTGAFRFGRGYALAKTLVFNITSGDAVVEYNVYIWH 189

[Close]

BLAST of Sed0019560.1 vs. ExPASy Swiss-Prot
Match: Q9FI66 (Dirigent protein 3 OS=Arabidopsis thaliana OX=3702 GN=DIR3 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.3e-41
Identity = 93/181 (51.38%), Postives = 126/181 (69.61%), Query Frame = 0


Query: 24  LLVTSATALV-------RPILSPEKVGLGGRREKLSHLHFYFHDTVSGRDPTAVAV--VA 83
           +L+ +ATAL           ++ + +GL G++EKL+HL  Y+HD V+GR+P+++ +    
Sbjct: 12  ILLLTATALAGKNGEDFARTINRKHLGL-GKKEKLTHLRVYWHDIVTGRNPSSIRIQGPV 71

Query: 84  AANGSSSLFGTVVVIDDPLTVGPETGSKLVGRAQGVYGGASQTEIGLLMVMNFAFVEGKY 143
           A   SSS FG++ +ID+ LT+     S +VG+AQG+Y GA+Q EIGLLM MN AF  GKY
Sbjct: 72  AKYSSSSYFGSITMIDNALTLDVPINSTVVGQAQGMYVGAAQKEIGLLMAMNLAFKTGKY 131

Query: 144 NGSYLSILGRNTVASAVREMPVVGGGGLFRFARGYAQANTHTFNYTTGNAVVEYNVYVFH 196
           NGS ++ILGRNTV S VREMPVVGG G+FRFARGY +A T  F+  TG+A VE N Y+ H
Sbjct: 132 NGSTITILGRNTVMSKVREMPVVGGSGMFRFARGYVEARTKLFDMKTGDATVESNCYILH 191

[Close]

BLAST of Sed0019560.1 vs. ExPASy Swiss-Prot
Match: I1JNN8 (Pterocarpan synthase 1 OS=Glycine max OX=3847 GN=PTS1 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.3e-41
Identity = 100/189 (52.91%), Postives = 128/189 (67.72%), Query Frame = 0


Query: 11  AASTFAAAAIFSALLVTSATALVRPILSPEKVGLGGRREKLSHLHFYFHDTVSGRDPTAV 70
           A STF      S LL +  TA     L+P    LG R E+ +HLHF+FHD V+G  P+ V
Sbjct: 2   AKSTFFVCLNLS-LLFSLVTATYYSSLTPTL--LGFREEQFTHLHFFFHDVVTGPKPSMV 61

Query: 71  AVVAAANGSSS---LFGTVVVIDDPLTVGPETGSKLVGRAQGVYGGASQTEIGLLMVMNF 130
             +A  NG +     FGTVV +DDPLTVGPE  SKLVG+AQG+Y   SQ E+GL+MVM  
Sbjct: 62  -FIAEPNGKAKDALPFGTVVAMDDPLTVGPEQDSKLVGKAQGIYTSISQEEMGLMMVMTM 121

Query: 131 AFVEGKYNGSYLSILGRNTVAS-AVREMPVVGGGGLFRFARGYAQANTHTFNYTTGNAVV 190
           AF +G +NGS +S+LGRN + S  VREM +VGG G FRFARGYAQA  ++ ++T G+A+V
Sbjct: 122 AFTDGDFNGSTISVLGRNMIMSEPVREMAIVGGTGAFRFARGYAQARFYSVDFTKGDAIV 181

Query: 191 EYNVYVFHY 196
           EY+V+V HY
Sbjct: 182 EYDVFVNHY 186

[Close]

BLAST of Sed0019560.1 vs. ExPASy TrEMBL
Match: A0A6J1F1F6 (Dirigent protein OS=Cucurbita moschata OX=3662 GN=LOC111441505 PE=3 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.1e-66
Identity = 145/197 (73.60%), Postives = 157/197 (79.70%), Query Frame = 0


Query: 1   MATTLFRKRSAASTFAAAAIFSALLVTSATALVRPILSPEKVGLGGRREKLSHLHFYFHD 60
           MA T    RSAA    AAA+F +L +TSA A   P+LS EK+GL  RREKLSHLHFYFHD
Sbjct: 1   MAPTFIANRSAA---VAAAVFFSLFLTSAFAAAEPVLSLEKLGL-RRREKLSHLHFYFHD 60

Query: 61  TVSGRDPTAVAVV--AAANGSSSLFGTVVVIDDPLTVGPETGSKLVGRAQGVYGGASQTE 120
            VSGR+PTAV VV    AN S SLFG VV+ DDPLT  PE GSKL+GR QG Y  ASQTE
Sbjct: 61  IVSGRNPTAVPVVLPPQANASRSLFGMVVMTDDPLTERPEIGSKLLGRVQGFYASASQTE 120

Query: 121 IGLLMVMNFAFVEGKYNGSYLSILGRNTVASAVREMPVVGGGGLFRFARGYAQANTHTFN 180
           +G LMVMNFAFVEGKYNGSYLSILGRNTV S VREMPVVGGGGLFRFARGYAQA T+T N
Sbjct: 121 LGFLMVMNFAFVEGKYNGSYLSILGRNTVMSPVREMPVVGGGGLFRFARGYAQAKTYTVN 180

Query: 181 YTTGNAVVEYNVYVFHY 196
           Y+TG+AVVEYNVYVFHY
Sbjct: 181 YSTGDAVVEYNVYVFHY 193

[Close]

BLAST of Sed0019560.1 vs. ExPASy TrEMBL
Match: A0A6J1IYD1 (Dirigent protein OS=Cucurbita maxima OX=3661 GN=LOC111481758 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 3.6e-66
Identity = 145/197 (73.60%), Postives = 160/197 (81.22%), Query Frame = 0


Query: 1   MATTLFRKRSAASTFAAAAIFSALLVTSATALVRPILSPEKVGLGGRREKLSHLHFYFHD 60
           MA T    RSAA    AAA+  +L +TSA A  +P+LS EK+GL  RREKLSHLHFYFHD
Sbjct: 1   MAPTFIPNRSAA---VAAALCFSLFLTSALAAAKPVLSLEKLGL-RRREKLSHLHFYFHD 60

Query: 61  TVSGRDPTAVAVV--AAANGSSSLFGTVVVIDDPLTVGPETGSKLVGRAQGVYGGASQTE 120
            +SGR+PTAV VV    AN S SLFG VV+ DDPLT  PE GSKL+GRAQG Y  ASQTE
Sbjct: 61  ILSGRNPTAVPVVLPPQANASRSLFGMVVMTDDPLTERPEIGSKLLGRAQGFYASASQTE 120

Query: 121 IGLLMVMNFAFVEGKYNGSYLSILGRNTVASAVREMPVVGGGGLFRFARGYAQANTHTFN 180
           +GLLMVMNFAFVEGKYNGSYLSILGRNTV SAVREMPVVGGGGLFRFARGYAQA T+T +
Sbjct: 121 LGLLMVMNFAFVEGKYNGSYLSILGRNTVMSAVREMPVVGGGGLFRFARGYAQAKTYTVD 180

Query: 181 YTTGNAVVEYNVYVFHY 196
           Y+TG+AVVEYNVYVFHY
Sbjct: 181 YSTGDAVVEYNVYVFHY 193

[Close]

BLAST of Sed0019560.1 vs. ExPASy TrEMBL
Match: A0A5A7TQT1 (Dirigent protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005190 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 7.4e-64
Identity = 136/184 (73.91%), Postives = 150/184 (81.52%), Query Frame = 0


Query: 13  STFAAAAIFSALLVTSATALVRPILSPEKVGLGGRREKLSHLHFYFHDTVSGRDPTAVAV 72
           ST   AAIF +L +TS  A    +LSPEK+G+  RREKLSHLHFYFHD VSGRDPTAV V
Sbjct: 10  STAVPAAIFFSLFLTSLLAASDTVLSPEKLGI-RRREKLSHLHFYFHDIVSGRDPTAVFV 69

Query: 73  V-AAANGSSSLFGTVVVIDDPLTVGPETGSKLVGRAQGVYGGASQTEIGLLMVMNFAFVE 132
           V   +N S +LFG VV+ DDPLT  PE GSKL+G+AQG Y GASQTE G LMVMNFAFVE
Sbjct: 70  VPPPSNASRTLFGAVVMTDDPLTERPEIGSKLLGKAQGFYTGASQTEFGFLMVMNFAFVE 129

Query: 133 GKYNGSYLSILGRNTVASAVREMPVVGGGGLFRFARGYAQANTHTFNYTTGNAVVEYNVY 192
           GKYNGSYLSILGRNTV SAVREMPVVGGGGLFRFARGYA A TH  N+++G+AVVEYNVY
Sbjct: 130 GKYNGSYLSILGRNTVMSAVREMPVVGGGGLFRFARGYALAKTHAVNFSSGDAVVEYNVY 189

Query: 193 VFHY 196
           VFHY
Sbjct: 190 VFHY 192

[Close]

BLAST of Sed0019560.1 vs. ExPASy TrEMBL
Match: A0A0A0LBR8 (Dirigent protein OS=Cucumis sativus OX=3659 GN=Csa_3G798110 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 2.2e-63
Identity = 133/185 (71.89%), Postives = 152/185 (82.16%), Query Frame = 0


Query: 13  STFAAAAIFSALLVTSATALVRPILSPEKVGLGGRREKLSHLHFYFHDTVSGRDPTAVAV 72
           ST  AAA F +L +TS  A    +LSPEK+G+  RREKLSHLHFYFHD VSGR+PTA+ V
Sbjct: 10  STAVAAATFFSLFLTSLLAASDTVLSPEKLGI-RRREKLSHLHFYFHDIVSGRNPTALIV 69

Query: 73  V--AAANGSSSLFGTVVVIDDPLTVGPETGSKLVGRAQGVYGGASQTEIGLLMVMNFAFV 132
           V   ++N S +LFG VV+ DDPLT  PE GSKL+G+AQG Y GAS+TE GLLMVMNFAFV
Sbjct: 70  VPPPSSNASRTLFGAVVMTDDPLTERPEIGSKLLGKAQGFYAGASKTEFGLLMVMNFAFV 129

Query: 133 EGKYNGSYLSILGRNTVASAVREMPVVGGGGLFRFARGYAQANTHTFNYTTGNAVVEYNV 192
           EGKYNGSYLSILGRNT+ SAVREMPVVGGGGLFRFARGYA A TH  N+++G+AVVEYNV
Sbjct: 130 EGKYNGSYLSILGRNTIMSAVREMPVVGGGGLFRFARGYALAKTHALNFSSGDAVVEYNV 189

Query: 193 YVFHY 196
           YVFHY
Sbjct: 190 YVFHY 193

[Close]

BLAST of Sed0019560.1 vs. ExPASy TrEMBL
Match: A0A1S3B8E5 (Dirigent protein OS=Cucumis melo OX=3656 GN=LOC103487157 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.8e-62
Identity = 131/176 (74.43%), Postives = 145/176 (82.39%), Query Frame = 0


Query: 21  FSALLVTSATALVRPILSPEKVGLGGRREKLSHLHFYFHDTVSGRDPTAVAVV-AAANGS 80
           F +L +TS  A    +LSPEK+G+  RREKLSHLHFYFHD VSGRDPTAV VV   +N S
Sbjct: 32  FFSLFLTSLLAASDTVLSPEKLGI-RRREKLSHLHFYFHDIVSGRDPTAVFVVPPPSNAS 91

Query: 81  SSLFGTVVVIDDPLTVGPETGSKLVGRAQGVYGGASQTEIGLLMVMNFAFVEGKYNGSYL 140
            +LFG VV+ DDPLT  PE GSKL+G+AQG Y GASQTE G LMVMNFAFVEGKYNGSYL
Sbjct: 92  RTLFGAVVMTDDPLTERPEIGSKLLGKAQGFYTGASQTEFGFLMVMNFAFVEGKYNGSYL 151

Query: 141 SILGRNTVASAVREMPVVGGGGLFRFARGYAQANTHTFNYTTGNAVVEYNVYVFHY 196
           SILGRNTV SAVREMPVVGGGGLFRFARGYA A TH  N+++G+AVVEYNVYVFHY
Sbjct: 152 SILGRNTVMSAVREMPVVGGGGLFRFARGYALAKTHAVNFSSGDAVVEYNVYVFHY 206

[Close]

BLAST of Sed0019560.1 vs. TAIR 10
Match: AT1G58170.1 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 176.4 bits (446), Expect = 2.2e-44
Identity = 94/183 (51.37%), Postives = 130/183 (71.04%), Query Frame = 0


Query: 19  AIFSALLVTSAT-ALVRPILSPEKVG---LGGRREKLSHLHFYFHDTVSGRDPTAVAVVA 78
           +  S  L++S T ALV   ++ E +    L  ++EKL+H   Y+HD V+G+D ++V+++ 
Sbjct: 3   SFLSFFLISSRTLALVLISVTGETLESNFLHHKKEKLTHFRVYWHDIVTGQDSSSVSIMN 62

Query: 79  AAN--GSSSLFGTVVVIDDPLTVGPETGSKLVGRAQGVYGGASQTEIGLLMVMNFAFVEG 138
                  ++ FG + +ID+PLT+ P+  SK+VGRAQG Y G S+ EIGLLM MNFA ++G
Sbjct: 63  PPKKYTGATGFGLMRMIDNPLTLTPKLSSKMVGRAQGFYAGTSKEEIGLLMAMNFAILDG 122

Query: 139 KYNGSYLSILGRNTVASAVREMPVVGGGGLFRFARGYAQANTHTFNYTTGNAVVEYNVYV 196
           KYNGS +++LGRN+V   VREMPV+GG GLFRFARGY QA+TH FN  TGNA+VEYN Y+
Sbjct: 123 KYNGSTITVLGRNSVFDKVREMPVIGGSGLFRFARGYVQASTHEFNLKTGNAIVEYNCYL 182

[Close]

BLAST of Sed0019560.1 vs. TAIR 10
Match: AT1G65870.1 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 171.4 bits (433), Expect = 7.2e-43
Identity = 90/178 (50.56%), Postives = 119/178 (66.85%), Query Frame = 0


Query: 19  AIFSALLVTSATALVRPILSPEKVGLGGRREKLSHLHFYFHDTVSGRDPTAVAVV--AAA 78
           A+  A  +T + +    + +P     G + +KL+HLHFYFHD VSG  PT+V V      
Sbjct: 15  ALILAATITESKSFSTTVKAPYP---GHKPDKLTHLHFYFHDIVSGDKPTSVQVANGPTT 74

Query: 79  NGSSSLFGTVVVIDDPLTVGPETGSKLVGRAQGVYGGASQTEIGLLMVMNFAFVEGKYNG 138
           N S++ FG V V+DD LTVGPE  S+ VGRAQG+Y  A Q ++GLLM  N  F +GK++ 
Sbjct: 75  NSSATGFGLVAVVDDKLTVGPEITSEEVGRAQGMYASADQNKLGLLMAFNLVFTKGKFSD 134

Query: 139 SYLSILGRNTVASAVREMPVVGGGGLFRFARGYAQANTHTFNYTTGNAVVEYNVYVFH 195
           S +++ GRN V S VREMP++GG G FRF RGYA A T  FN T+G+AVVEYNVY++H
Sbjct: 135 STVAMYGRNPVLSKVREMPIIGGTGAFRFGRGYALAKTLVFNITSGDAVVEYNVYIWH 189

[Close]

BLAST of Sed0019560.1 vs. TAIR 10
Match: AT5G49040.1 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 171.0 bits (432), Expect = 9.3e-43
Identity = 93/181 (51.38%), Postives = 126/181 (69.61%), Query Frame = 0


Query: 24  LLVTSATALV-------RPILSPEKVGLGGRREKLSHLHFYFHDTVSGRDPTAVAV--VA 83
           +L+ +ATAL           ++ + +GL G++EKL+HL  Y+HD V+GR+P+++ +    
Sbjct: 12  ILLLTATALAGKNGEDFARTINRKHLGL-GKKEKLTHLRVYWHDIVTGRNPSSIRIQGPV 71

Query: 84  AANGSSSLFGTVVVIDDPLTVGPETGSKLVGRAQGVYGGASQTEIGLLMVMNFAFVEGKY 143
           A   SSS FG++ +ID+ LT+     S +VG+AQG+Y GA+Q EIGLLM MN AF  GKY
Sbjct: 72  AKYSSSSYFGSITMIDNALTLDVPINSTVVGQAQGMYVGAAQKEIGLLMAMNLAFKTGKY 131

Query: 144 NGSYLSILGRNTVASAVREMPVVGGGGLFRFARGYAQANTHTFNYTTGNAVVEYNVYVFH 196
           NGS ++ILGRNTV S VREMPVVGG G+FRFARGY +A T  F+  TG+A VE N Y+ H
Sbjct: 132 NGSTITILGRNTVMSKVREMPVVGGSGMFRFARGYVEARTKLFDMKTGDATVESNCYILH 191

[Close]

BLAST of Sed0019560.1 vs. TAIR 10
Match: AT3G13650.1 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 161.8 bits (408), Expect = 5.7e-40
Identity = 83/156 (53.21%), Postives = 107/156 (68.59%), Query Frame = 0


Query: 40  EKVGLGGRREKLSHLHFYFHDTVSGRDPTAVAVVAAANGSSSLFGTVVVIDDPLTVGPET 99
           +K   G R+EKL+H   Y+HD +SG +P++V V+     +SS FG+V VID+ LT     
Sbjct: 32  DKKHFGLRKEKLTHFRVYWHDILSGSNPSSV-VINPPISNSSFFGSVTVIDNRLTTEVAV 91

Query: 100 GSKLVGRAQGVYGGASQTEIGLLMVMNFAFVEGKYNGSYLSILGRNTVASAVREMPVVGG 159
            S LVG+AQG+Y    Q +   LMVMNFAF  GKYNGS ++ILGRN V + VREMPV+GG
Sbjct: 92  NSTLVGQAQGIYAATGQRDASALMVMNFAFKTGKYNGSSIAILGRNAVLTKVREMPVIGG 151

Query: 160 GGLFRFARGYAQANTHTFNYTTGNAVVEYNVYVFHY 196
            GLFRFARGY +A T  F+  +G+A VEY+ YV HY
Sbjct: 152 SGLFRFARGYVEARTMWFDQKSGDATVEYSCYVLHY 186

[Close]

BLAST of Sed0019560.1 vs. TAIR 10
Match: AT1G55210.1 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 159.8 bits (403), Expect = 2.2e-39
Identity = 79/149 (53.02%), Postives = 103/149 (69.13%), Query Frame = 0


Query: 47  RREKLSHLHFYFHDTVSGRDPTAVAVVAAANGSSSLFGTVVVIDDPLTVGPETGSKLVGR 106
           ++EKL+H   Y+HD +SG +PT++ +      +SS FG + +ID+ LT      S ++G+
Sbjct: 40  KKEKLTHFKVYWHDILSGPNPTSIMIQPPVT-NSSYFGAISMIDNALTAKVPMNSTVLGQ 99

Query: 107 AQGVYGGASQTEIGLLMVMNFAFVEGKYNGSYLSILGRNTVASAVREMPVVGGGGLFRFA 166
           AQG Y GA+Q E+G LM MNFAF  GKYNGS ++ILGRNT  S VREMP+VGG GLFRFA
Sbjct: 100 AQGFYAGAAQKELGFLMAMNFAFKTGKYNGSTITILGRNTALSEVREMPIVGGSGLFRFA 159

Query: 167 RGYAQANTHTFNYTTGNAVVEYNVYVFHY 196
           RGY +A T   N   G+A VEY+ YV HY
Sbjct: 160 RGYVEARTKWINLKNGDATVEYSCYVLHY 187

The following BLAST results are available for this feature:

BLAST of Sed0019560.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023527247.1	8.7e-67	74.11	dirigent protein 22-like [Cucurbita pepo subsp. pepo]	[more]
KAG6580789.1	4.3e-66	73.60	Dirigent protein 20, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017539...	[more]
XP_022934301.1	4.3e-66	73.60	dirigent protein 22-like [Cucurbita moschata]	[more]
XP_022983112.1	7.4e-66	73.60	dirigent protein 22-like [Cucurbita maxima]	[more]
XP_038905141.1	6.9e-64	75.56	dirigent protein 22-like [Benincasa hispida]	[more]

BLAST of Sed0019560.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A1V1FH01	3.7e-44	53.72	Pterocarpan synthase 1 OS=Glycyrrhiza echinata OX=46348 GN=PTS1 PE=1 SV=1	[more]
Q9C523	3.1e-43	51.37	Dirigent protein 19 OS=Arabidopsis thaliana OX=3702 GN=DIR19 PE=2 SV=1	[more]
Q9SS03	1.0e-41	50.56	Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1	[more]
Q9FI66	1.3e-41	51.38	Dirigent protein 3 OS=Arabidopsis thaliana OX=3702 GN=DIR3 PE=3 SV=1	[more]
I1JNN8	1.3e-41	52.91	Pterocarpan synthase 1 OS=Glycine max OX=3847 GN=PTS1 PE=2 SV=1	[more]

BLAST of Sed0019560.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F1F6	2.1e-66	73.60	Dirigent protein OS=Cucurbita moschata OX=3662 GN=LOC111441505 PE=3 SV=1	[more]
A0A6J1IYD1	3.6e-66	73.60	Dirigent protein OS=Cucurbita maxima OX=3661 GN=LOC111481758 PE=3 SV=1	[more]
A0A5A7TQT1	7.4e-64	73.91	Dirigent protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005...	[more]
A0A0A0LBR8	2.2e-63	71.89	Dirigent protein OS=Cucumis sativus OX=3659 GN=Csa_3G798110 PE=3 SV=1	[more]
A0A1S3B8E5	1.8e-62	74.43	Dirigent protein OS=Cucumis melo OX=3656 GN=LOC103487157 PE=3 SV=1	[more]

BLAST of Sed0019560.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G58170.1	2.2e-44	51.37	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT1G65870.1	7.2e-43	50.56	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT5G49040.1	9.3e-43	51.38	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT3G13650.1	5.7e-40	53.21	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT1G55210.1	2.2e-39	53.02	Disease resistance-responsive (dirigent-like protein) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004265	Dirigent protein	PFAM	PF03018	Dirigent	coord: 52..193 e-value: 6.6E-55 score: 185.0
IPR044859	Allene oxide cyclase/Dirigent protein	GENE3D	2.40.480.10		coord: 44..189 e-value: 7.0E-18 score: 66.8
None	No IPR available	PANTHER	PTHR21495	NUCLEOPORIN-RELATED	coord: 14..194
None	No IPR available	PANTHER	PTHR21495:SF200	DIRIGENT PROTEIN	coord: 14..194

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0019560	Sed0019560	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0019560.1-three_prime_utr	Sed0019560.1-three_prime_utr-LG12:9587078..9587286	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0019560.1-exon	Sed0019560.1-exon-LG12:9587078..9587968	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0019560.1-cds	Sed0019560.1-cds-LG12:9587287..9587874	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0019560.1-five_prime_utr	Sed0019560.1-five_prime_utr-LG12:9587875..9587968	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0019560.1	Sed0019560.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0048046	apoplast
cellular_component	GO:0016020	membrane