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Sed0019354.1 (mRNA) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCTAATGGAGAGAAACACAAGATCACATGTGCCATGGATCATATTATAGACGCTCAATTGAAAGGTGAGATTAGCGAAGAAAATGTAATTTACATTGTAGAAAACATCAATGTGGCAGCGATAGAAACGACGTTATGGTCGATGGAATGGGCAATAGCAGAATTGGTGAATCATCCAAAAATTCAACAAAAGATTCGAGATGAGCTAAAGAGCGTCCTTAAAGGAAAGGAAGTGACTGAATCTAACCTTCATGAGTTACCATATTTGCAAGCAACAGTGAAAGAGACATTAAGGTTGCACACTCCAATACCATTGTTGGTGCCACATATGAACTTGAAGGAGGAAAAACTTGGAGGATTCACCATCCCTAAGGAATCCAAGGTGGTAGTAAATGCATGGTGGCTAGCCAACAACCCTGAGTGGTGGAAGAATCCAGAAGAATTTAGGCCGGAAAGATTCTTCGAAGAAGAAAGTGGGATCGAAGCTGTTGCTGCAGGAAAAGTGGATTACAGATTCTTACCATTTGGAGTTGGAAGGAGGAGTTGTCCTGGACTTGTTTTAGCCATGCCAATCTTAGGCCTCATCGTTGCTAAATTGGTTTCAAAGTTTGAAATGATACCTCCTAGTGGAATGGACAAGATTGACGTTACTGAGAAAGGAGGACAATTCAGTCTGCATATTGCCAACCATTCAACTGTCGTATTCGAGCCAATAATGGCTTAGCCTAGTTAGCTTTCTCTTAATGGTGTTGTTAATTTAAAGAGTGCATCTTGTTTTCTCTTCATTACTTTGAATTTTTTTATGTGCTTATGTTGTAATCTCTTTAATTTATAATATTAAAAGAGAAGGAATAATATTTCCAAGATCCC ATGGCTGCTAATGGAGAGAAACACAAGATCACATGTGCCATGGATCATATTATAGACGCTCAATTGAAAGGTGAGATTAGCGAAGAAAATGTAATTTACATTGTAGAAAACATCAATGTGGCAGCGATAGAAACGACGTTATGGTCGATGGAATGGGCAATAGCAGAATTGGTGAATCATCCAAAAATTCAACAAAAGATTCGAGATGAGCTAAAGAGCGTCCTTAAAGGAAAGGAAGTGACTGAATCTAACCTTCATGAGTTACCATATTTGCAAGCAACATTTGAAATGATACCTCCTAGTGGAATGGACAAGATTGACGTTACTGAGAAAGGAGGACAATTCAGTCTGCATATTGCCAACCATTCAACTGTCGTATTCGAGCCAATAATGGCTTAGCCTAGTTAGCTTTCTCTTAATGGTGTTGTTAATTTAAAGAGTGCATCTTGTTTTCTCTTCATTACTTTGAATTTTTTTATGTGCTTATGTTGTAATCTCTTTAATTTATAATATTAAAAGAGAAGGAATAATATTTCCAAGATCCC ATGGCTGCTAATGGAGAGAAACACAAGATCACATGTGCCATGGATCATATTATAGACGCTCAATTGAAAGGTGAGATTAGCGAAGAAAATGTAATTTACATTGTAGAAAACATCAATGTGGCAGCGATAGAAACGACGTTATGGTCGATGGAATGGGCAATAGCAGAATTGGTGAATCATCCAAAAATTCAACAAAAGATTCGAGATGAGCTAAAGAGCGTCCTTAAAGGAAAGGAAGTGACTGAATCTAACCTTCATGAGTTACCATATTTGCAAGCAACATTTGAAATGATACCTCCTAGTGGAATGGACAAGATTGACGTTACTGAGAAAGGAGGACAATTCAGTCTGCATATTGCCAACCATTCAACTGTCGTATTCGAGCCAATAATGGCTTAG MAANGEKHKITCAMDHIIDAQLKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPKIQQKIRDELKSVLKGKEVTESNLHELPYLQATFEMIPPSGMDKIDVTEKGGQFSLHIANHSTVVFEPIMA Homology
BLAST of Sed0019354.1 vs. NCBI nr
Match: KAB5552000.1 (hypothetical protein DKX38_009311 [Salix brachista]) HSP 1 Score: 207.6 bits (527), Expect = 6.5e-50 Identity = 110/168 (65.48%), Postives = 121/168 (72.02%), Query Frame = 0
BLAST of Sed0019354.1 vs. NCBI nr
Match: CBI24058.3 (unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 204.1 bits (518), Expect = 7.2e-49 Identity = 110/179 (61.45%), Postives = 120/179 (67.04%), Query Frame = 0
BLAST of Sed0019354.1 vs. NCBI nr
Match: XP_022929767.1 (cytochrome P450 CYP73A100-like [Cucurbita moschata]) HSP 1 Score: 200.3 bits (508), Expect = 1.0e-47 Identity = 120/242 (49.59%), Postives = 127/242 (52.48%), Query Frame = 0
BLAST of Sed0019354.1 vs. NCBI nr
Match: XP_023545771.1 (cytochrome P450 CYP73A100-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 199.5 bits (506), Expect = 1.8e-47 Identity = 120/242 (49.59%), Postives = 127/242 (52.48%), Query Frame = 0
BLAST of Sed0019354.1 vs. NCBI nr
Match: TYK25913.1 (cytochrome P450 CYP73A100-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 199.5 bits (506), Expect = 1.8e-47 Identity = 120/240 (50.00%), Postives = 125/240 (52.08%), Query Frame = 0
BLAST of Sed0019354.1 vs. ExPASy Swiss-Prot
Match: H2DH22 (Cytochrome P450 CYP73A100 OS=Panax ginseng OX=4054 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 6.8e-42 Identity = 106/240 (44.17%), Postives = 119/240 (49.58%), Query Frame = 0
BLAST of Sed0019354.1 vs. ExPASy Swiss-Prot
Match: Q43240 (Trans-cinnamate 4-monooxygenase OS=Zinnia violacea OX=34245 GN=CYP73A12 PE=2 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 1.9e-31 Identity = 86/232 (37.07%), Postives = 107/232 (46.12%), Query Frame = 0
BLAST of Sed0019354.1 vs. ExPASy Swiss-Prot
Match: F1B283 (Trans-cinnamate 4-monooxygenase C4H2 OS=Petunia hybrida OX=4102 GN=C4H2 PE=2 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 4.1e-31 Identity = 84/232 (36.21%), Postives = 105/232 (45.26%), Query Frame = 0
BLAST of Sed0019354.1 vs. ExPASy Swiss-Prot
Match: P48522 (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus OX=4058 GN=CYP73A4 PE=2 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 1.6e-30 Identity = 82/232 (35.34%), Postives = 107/232 (46.12%), Query Frame = 0
BLAST of Sed0019354.1 vs. ExPASy Swiss-Prot
Match: Q42797 (Trans-cinnamate 4-monooxygenase OS=Glycine max OX=3847 GN=CYP73A11 PE=2 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 1.6e-30 Identity = 83/235 (35.32%), Postives = 106/235 (45.11%), Query Frame = 0
BLAST of Sed0019354.1 vs. ExPASy TrEMBL
Match: A0A0A0LMJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G069700 PE=3 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 8.3e-59 Identity = 118/134 (88.06%), Postives = 125/134 (93.28%), Query Frame = 0
BLAST of Sed0019354.1 vs. ExPASy TrEMBL
Match: A0A0A0LGX8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G069200 PE=3 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 3.0e-56 Identity = 113/129 (87.60%), Postives = 120/129 (93.02%), Query Frame = 0
BLAST of Sed0019354.1 vs. ExPASy TrEMBL
Match: A0A5N5MA76 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_009311 PE=3 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 3.2e-50 Identity = 110/168 (65.48%), Postives = 121/168 (72.02%), Query Frame = 0
BLAST of Sed0019354.1 vs. ExPASy TrEMBL
Match: A0A6J1ENL9 (cytochrome P450 CYP73A100-like OS=Cucurbita moschata OX=3662 GN=LOC111436256 PE=3 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 5.1e-48 Identity = 120/242 (49.59%), Postives = 127/242 (52.48%), Query Frame = 0
BLAST of Sed0019354.1 vs. ExPASy TrEMBL
Match: A0A5D3DQH8 (Cytochrome P450 CYP73A100-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold12488G00010 PE=3 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 8.6e-48 Identity = 120/240 (50.00%), Postives = 125/240 (52.08%), Query Frame = 0
BLAST of Sed0019354.1 vs. TAIR 10
Match: AT2G30490.1 (cinnamate-4-hydroxylase ) HSP 1 Score: 132.9 bits (333), Expect = 1.9e-31 Identity = 82/228 (35.96%), Postives = 104/228 (45.61%), Query Frame = 0
BLAST of Sed0019354.1 vs. TAIR 10
Match: AT1G74550.1 (cytochrome P450, family 98, subfamily A, polypeptide 9 ) HSP 1 Score: 62.8 bits (151), Expect = 2.4e-10 Identity = 28/86 (32.56%), Postives = 60/86 (69.77%), Query Frame = 0
BLAST of Sed0019354.1 vs. TAIR 10
Match: AT5G06900.1 (cytochrome P450, family 93, subfamily D, polypeptide 1 ) HSP 1 Score: 61.6 bits (148), Expect = 5.4e-10 Identity = 32/92 (34.78%), Postives = 55/92 (59.78%), Query Frame = 0
BLAST of Sed0019354.1 vs. TAIR 10
Match: AT2G40890.1 (cytochrome P450, family 98, subfamily A, polypeptide 3 ) HSP 1 Score: 61.2 bits (147), Expect = 7.1e-10 Identity = 33/104 (31.73%), Postives = 65/104 (62.50%), Query Frame = 0
BLAST of Sed0019354.1 vs. TAIR 10
Match: AT5G06905.1 (cytochrome P450, family 712, subfamily A, polypeptide 2 ) HSP 1 Score: 60.8 bits (146), Expect = 9.2e-10 Identity = 30/93 (32.26%), Postives = 57/93 (61.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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