Sed0019248.1 (mRNA) Chayote v1

Overview


Name	Sed0019248.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	zinc finger CCHC domain-containing protein 7 isoform X2
Location	LG12: 31939113 .. 31943489 (+)
Sequence length	2150
RNA-Seq Expression	Sed0019248.1
Synteny	Sed0019248.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTCTTTAACTTCGCTGAACGACATGTCGTCTCAATCCTTCAAGGAACAGACAGTAGTAGTATAAACAAAATTCGGGGAAAACCCTAGCCACCAAAGGCTGAAAAAAAAAACTGCCCAAATCTGCTCAGTTCTTCTCCCCCAATTCGATTAGGGTTTTTAGCAGATTGCAGTTCGATTCAGTTCCGTAATTGGGAAGATGGGGAGGAAGAAGAAGTTCGAATTCGAGGATGAAGAAGACGATGTTCAGGGTACGAAAGATGGGGGTTCGAAGTTTATCAATTCGTTGAGCAGTGACGACGACGAGGCCAATGAAGATCTTAGCCTCAAGATTGTTGAGAAGGCTTTGCGATTGCGCTCCGGAAAGTTGGTCGCCGTTGCCGGCGGTACTAAGGGCGGTGTTGCCGGCGATGAAGACGGCGAAGTGTTTTCATCGTCTTTGGAGTGTGCTGATCCTGAGGTGCCGGAATCGGGGAGTAAGAAGACGGTGAAGAAGAGGAAGAAGAAAGTCAAGAAGCTGGAATCTGAAGAGCGCGATGTGAGTATTTAACGAAATTTTGCTTTAGTCTTTTTGGAAGTATAGAAGAATTTTTTTTATCTTTTAGGACATTGCCACGGTCTTAGAAGGATTGTTTTTGTGGTCGATGTAAAGCAAATATGATAGCACTAGTTTCAAATTCAAAGAACAAACCGTCTTACATTTCTTGCCAGATTTTAGTTTCCTTTCCTTTAATCTGATATTAGGATTTCCAGTTATCGGTTACTAGAGCTTTGTATTTCTTAGTTTTGCTGATTCTTTTCAATTTAGGTGGTAGTCAGAGATGAACAGAAGATCGAGACAACCGGAATTATAGATCAAGTTGATACGGTGGAACCAAACTCTACTGAACCAACTGATAATAACGTGTTTAGGAAGCTTCTTGTGAGTCCCTTTTACCATTCTGAACTTCCATTAAGGAAAAATTTATTTGTGGAGGCTTAGTTTTGTATCTATGGTGTATTATTCTATCAGCGCGGACCAAGATACTTTGACCCTCCAGACAGTTGGGGAACTTGCTATAATTGTGGTGAGGAAGGCCATAGTGCTGTTAATTGCAAATCAGCTAAACGGAAGAAACCATGTTTTGTCTGTGGAAGTCTGGAACACAATGCAAGGAGTTGCGGAAAGGTCAGGAAGAAATCATTTTTCATAAAAAGGGGGATCTATAGTTAGTCATAGAAGTAACAAATAATATGAATATTATTTGAATATTGAGGTCGTGACTCATGGGTCAGGCCCTGTTGGTGGCAATAAACATTGAGATTTCATTTCCACTTTCAAGTTCCTAATTCAGAAACTACAATTTAATTGTTAGCTTTCTTCTGTATGTGAGTATGTATATTTTTGTATATAATTTATTCACAATTAAACTGAGTGTCTAGTGGTGTTTTAATATTTTCTTCTTACACCTTCTCCTGTTTCTTGCTCATTTGGACTTATTGAAAATTGAAATCCTTCTCCTTACCATCCTCAGGCACGAGACTGCTATATTTGCAAGAAAGTTGGGCATCGTGCAAAAGACTGTCCGGAGAAGCACAAAGATGCTTCTTCAAGCGCAGCAATATGTTTAAAATGTGGAGATCCTGGGCATGATATGTTTTCTTGTCGTAATCTTTATCCATATGATGATCTTAAGGTCTTCTTCTTTTCCAGAAGTTGTCTTGCATGCTGTATCATTTTTCTCAACCTGACTTGTAAAACACATAATTTTTTTCCCCAGAACATACAGTGCTATATTTGTAAGGGTTTTGGTCATTTGTGTTGTGTGAAGTCCACTGCTGATACTTCAGTAGATATTTCCTGCTATAAATGTGGACAGACTGGACATACTGGTCTGGTAAGTTCTCTATGCTCATATCTTACTGTATACGATTTTCACATGATACTCAATACTCATCACCTTTCATTTCCATTCGAGTTTTTTTGTTTAGTTTATGCTTTACTTTTCTATGCATGCCCACCTGTCTTGATTTGACTCCAATTGGCAATAACCATCAACAATGCCCACCTATTCTTGAGCATGAAAAAGTCTTTGATTCTTGGAATTATGTAATGCCATTGTATTTTCTTGTGCTAGTCAAAATTATTGGGATAAATGAGATGCTAATATTTCTCATAATTAAATAGTCCAATGTTCAGGGAGTTGGCATGTGAGGAAGTAGGCGACGACATAGTTTTTTTTAATAAATTTTCGATAGGGCTTTTGTAAATTTTCATACGTCAATGAAAAATATTTGTTTCCTACAAAGAAGAAATATTTGCAGGGCCAATAGTGTTGTTTTCACTTATTATTGCTGGAACATTCAAGTACAGGAATTTGTAATCACTTGAATCTTGTCGACAAGAGGGCTCATTTCTGTTAAATGTAGTTCCTTGCTTCTAAGTTTATTGCATGTGGATTCTTAATTTTTTGTCCCGTGTGTATGTAAATCTACAGGCATGCTCGAGATTACGTGGGGAAGTCTCTGGTTCTGTACCACATAGCTCATGCTATAGATGTGGTGAAGAAGGGCATTTTGCTCGTGAGTGCACTAGTTCCACAAAGGTAAATAAAAAAGCTTATTTATGCATTTACTTGTATTTCCTCTCAAAATGTGATTCCAAACTTTCACTTTATGGAACTTGCTCAGAGTGGCAAGGGGATTCTTGAGGAGGCGTCTGGTGATGCATCGACTAGCTCATGCTATAGATGTGGTGAACAAGGGCATTTTGTCCGTGAGTGCAACAGTTCCAACAAGGTAGGTAAAAGAAATTACGCATCGGAGTGTTTTATTAGGACAACATGTTCAATTTTCTATGCATTTACTTAAATTTCCTGTTGAAATGTGATTCTAAACTTTTACTATATGGTGGGGCTTTCTCAGGGTGGCAAGAGGAATCGTGAGTTATCTAACCCAAAATTAAGGTCACAAATAGAAGAAACTAACCATATGGGGTCGAAATCTGTATCTCATGATCTTTCAAATACTCATAGTAAGAAGAAAAAGATAAACCATGACGAAAAGTACACTAAATCGCCTAGAAAGTCCGTACAAAAGGGGCGGTGGATGATGGAAGATCCGGATTCTGGTAACTTCTCCCATGGAAAATTCATGAGAAATAACTGGAATTCTCCTGCTACACCATCTCGGTGGGATCATAATTATTATACAGAATATACCGATCACTATGAAAGCCCCCGATTTTCTGATCACTATGCAAGCCCTCGATCTTCTGGTCGCTATGCAAGTCCTCAATCTTACACAAAGCGGCGCACATTACATCCAGGCACTCCAATGTCATTAGGATCCAGTAAAGCTTCTCAGAATAGATTCTCGGCATCTCGATTTGGAGGCTTTAGCAATGAAGGAAGGAGGAAAAGCTATGGATGGTGGTAGAAAGTCTTACTTGATTTGAATGATCGGTAGCTGTTGGAGAGATATACAGTTCAAAGATTTGTTCTTTTGTTTATTGGTTCCATTGCAGAATCTGAGATCGTTGTAAGTGTTATTGTCGCTTCACTTGTGATAGTACAAGATAAACTTTTGAGTTTAATTTACATGATTCTATATTGCTCTTTAGAGTTGCCTGTTAGATTTCTTCATTTGCTGTTTATATTCTTCTTCGTTTTGTTACTTCGAATGAGTGTCCGAGTCAACTTTCATACAACATGACCTCATGAGAGAGTTTGACCCTATTATATTTGATTATAAAAAATGTGAGAAATTAATTTTTAGGAAGGTAACCAGTATGTATTGAACCAATAATCTGTATATTCTCCAATACCTTCTTGACCACTAAAGTCAACTTATGATGATTTTGGAGAGCATATTGTCGAGTAATGTTCTAGTGAATGTGTTGATTATCAGTTCTATGTTGTGGTTACCCTTGTATACACGTCGATTCAGTCTTCAGACATCATTATCAGAAAAGATTAGATATCTTAGGTGAGTTAAAATTGACTAGTTATTTTGAATATTTTCACTTGCCAGAAGTTTGATTATGCAACAGCAAATTGAAGATTACAACTGCAATCAGGCTAAATATTAGTTTGCACTTGTTTGGTCATCTTTTTTTTATTGTTTGTGAGTTGTTGAAATTCTGAATCATTATTGTTCCAATGCAGAATGTTTTTGATGGCACGCTTACGAACACGAGCGACGTGGAACAGGATCGAGACTCTTTTGATCGTGTTGGACATTGCTGTTGAAACTCAGCCAATGGCTTCTTCTTGCTGTATTTCTTTTTGACTTCTCCCATCATCCACCTTCCCTGATTCTTCCCTTTTTCTTGTAGTTGATTTAACTTGAGCTGCATCTTAGATGGAAATGGTTTTGATTTAATTAGTGACTCCAGGGG

mRNA sequence

GCTTCTTTAACTTCGCTGAACGACATGTCGTCTCAATCCTTCAAGGAACAGACAGTAGTAGTATAAACAAAATTCGGGGAAAACCCTAGCCACCAAAGGCTGAAAAAAAAAACTGCCCAAATCTGCTCAGTTCTTCTCCCCCAATTCGATTAGGGTTTTTAGCAGATTGCAGTTCGATTCAGTTCCGTAATTGGGAAGATGGGGAGGAAGAAGAAGTTCGAATTCGAGGATGAAGAAGACGATGTTCAGGGTACGAAAGATGGGGGTTCGAAGTTTATCAATTCGTTGAGCAGTGACGACGACGAGGCCAATGAAGATCTTAGCCTCAAGATTGTTGAGAAGGCTTTGCGATTGCGCTCCGGAAAGTTGGTCGCCGTTGCCGGCGGTACTAAGGGCGGTGTTGCCGGCGATGAAGACGGCGAAGTGTTTTCATCGTCTTTGGAGTGTGCTGATCCTGAGGTGCCGGAATCGGGGAGTAAGAAGACGGTGAAGAAGAGGAAGAAGAAAGTCAAGAAGCTGGAATCTGAAGAGCGCGATGTGGTAGTCAGAGATGAACAGAAGATCGAGACAACCGGAATTATAGATCAAGTTGATACGGTGGAACCAAACTCTACTGAACCAACTGATAATAACGTGTTTAGGAAGCTTCTTCGCGGACCAAGATACTTTGACCCTCCAGACAGTTGGGGAACTTGCTATAATTGTGGTGAGGAAGGCCATAGTGCTGTTAATTGCAAATCAGCTAAACGGAAGAAACCATGTTTTGTCTGTGGAAGTCTGGAACACAATGCAAGGAGTTGCGGAAAGGCACGAGACTGCTATATTTGCAAGAAAGTTGGGCATCGTGCAAAAGACTGTCCGGAGAAGCACAAAGATGCTTCTTCAAGCGCAGCAATATGTTTAAAATGTGGAGATCCTGGGCATGATATGTTTTCTTGTCGTAATCTTTATCCATATGATGATCTTAAGAACATACAGTGCTATATTTGTAAGGGTTTTGGTCATTTGTGTTGTGTGAAGTCCACTGCTGATACTTCAGTAGATATTTCCTGCTATAAATGTGGACAGACTGGACATACTGGTCTGGCATGCTCGAGATTACGTGGGGAAGTCTCTGGTTCTGTACCACATAGCTCATGCTATAGATGTGGTGAAGAAGGGCATTTTGCTCGTGAGTGCACTAGTTCCACAAAGAGTGGCAAGGGGATTCTTGAGGAGGCGTCTGGTGATGCATCGACTAGCTCATGCTATAGATGTGGTGAACAAGGGCATTTTGTCCGTGAGTGCAACAGTTCCAACAAGGGTGGCAAGAGGAATCGTGAGTTATCTAACCCAAAATTAAGGTCACAAATAGAAGAAACTAACCATATGGGGTCGAAATCTGTATCTCATGATCTTTCAAATACTCATAGTAAGAAGAAAAAGATAAACCATGACGAAAAGTACACTAAATCGCCTAGAAAGTCCGTACAAAAGGGGCGGTGGATGATGGAAGATCCGGATTCTGGTAACTTCTCCCATGGAAAATTCATGAGAAATAACTGGAATTCTCCTGCTACACCATCTCGGTGGGATCATAATTATTATACAGAATATACCGATCACTATGAAAGCCCCCGATTTTCTGATCACTATGCAAGCCCTCGATCTTCTGGTCGCTATGCAAGTCCTCAATCTTACACAAAGCGGCGCACATTACATCCAGGCACTCCAATGTCATTAGGATCCAGTAAAGCTTCTCAGAATAGATTCTCGGCATCTCGATTTGGAGGCTTTAGCAATGAAGGAAGGAGGAAAAGCTATGGATGGTGGTAGAAAGTCTTACTTGATTTGAATGATCGGTAGCTGTTGGAGAGATATACAGTTCAAAGATTTGTTCTTTTGTTTATTGGTTCCATTGCAGAATCTGAGATCGTTAATGTTTTTGATGGCACGCTTACGAACACGAGCGACGTGGAACAGGATCGAGACTCTTTTGATCGTGTTGGACATTGCTGTTGAAACTCAGCCAATGGCTTCTTCTTGCTGTATTTCTTTTTGACTTCTCCCATCATCCACCTTCCCTGATTCTTCCCTTTTTCTTGTAGTTGATTTAACTTGAGCTGCATCTTAGATGGAAATGGTTTTGATTTAATTAGTGACTCCAGGGG

Coding sequence (CDS)

ATGGGGAGGAAGAAGAAGTTCGAATTCGAGGATGAAGAAGACGATGTTCAGGGTACGAAAGATGGGGGTTCGAAGTTTATCAATTCGTTGAGCAGTGACGACGACGAGGCCAATGAAGATCTTAGCCTCAAGATTGTTGAGAAGGCTTTGCGATTGCGCTCCGGAAAGTTGGTCGCCGTTGCCGGCGGTACTAAGGGCGGTGTTGCCGGCGATGAAGACGGCGAAGTGTTTTCATCGTCTTTGGAGTGTGCTGATCCTGAGGTGCCGGAATCGGGGAGTAAGAAGACGGTGAAGAAGAGGAAGAAGAAAGTCAAGAAGCTGGAATCTGAAGAGCGCGATGTGGTAGTCAGAGATGAACAGAAGATCGAGACAACCGGAATTATAGATCAAGTTGATACGGTGGAACCAAACTCTACTGAACCAACTGATAATAACGTGTTTAGGAAGCTTCTTCGCGGACCAAGATACTTTGACCCTCCAGACAGTTGGGGAACTTGCTATAATTGTGGTGAGGAAGGCCATAGTGCTGTTAATTGCAAATCAGCTAAACGGAAGAAACCATGTTTTGTCTGTGGAAGTCTGGAACACAATGCAAGGAGTTGCGGAAAGGCACGAGACTGCTATATTTGCAAGAAAGTTGGGCATCGTGCAAAAGACTGTCCGGAGAAGCACAAAGATGCTTCTTCAAGCGCAGCAATATGTTTAAAATGTGGAGATCCTGGGCATGATATGTTTTCTTGTCGTAATCTTTATCCATATGATGATCTTAAGAACATACAGTGCTATATTTGTAAGGGTTTTGGTCATTTGTGTTGTGTGAAGTCCACTGCTGATACTTCAGTAGATATTTCCTGCTATAAATGTGGACAGACTGGACATACTGGTCTGGCATGCTCGAGATTACGTGGGGAAGTCTCTGGTTCTGTACCACATAGCTCATGCTATAGATGTGGTGAAGAAGGGCATTTTGCTCGTGAGTGCACTAGTTCCACAAAGAGTGGCAAGGGGATTCTTGAGGAGGCGTCTGGTGATGCATCGACTAGCTCATGCTATAGATGTGGTGAACAAGGGCATTTTGTCCGTGAGTGCAACAGTTCCAACAAGGGTGGCAAGAGGAATCGTGAGTTATCTAACCCAAAATTAAGGTCACAAATAGAAGAAACTAACCATATGGGGTCGAAATCTGTATCTCATGATCTTTCAAATACTCATAGTAAGAAGAAAAAGATAAACCATGACGAAAAGTACACTAAATCGCCTAGAAAGTCCGTACAAAAGGGGCGGTGGATGATGGAAGATCCGGATTCTGGTAACTTCTCCCATGGAAAATTCATGAGAAATAACTGGAATTCTCCTGCTACACCATCTCGGTGGGATCATAATTATTATACAGAATATACCGATCACTATGAAAGCCCCCGATTTTCTGATCACTATGCAAGCCCTCGATCTTCTGGTCGCTATGCAAGTCCTCAATCTTACACAAAGCGGCGCACATTACATCCAGGCACTCCAATGTCATTAGGATCCAGTAAAGCTTCTCAGAATAGATTCTCGGCATCTCGATTTGGAGGCTTTAGCAATGAAGGAAGGAGGAAAAGCTATGGATGGTGGTAG

Protein sequence

MGRKKKFEFEDEEDDVQGTKDGGSKFINSLSSDDDEANEDLSLKIVEKALRLRSGKLVAVAGGTKGGVAGDEDGEVFSSSLECADPEVPESGSKKTVKKRKKKVKKLESEERDVVVRDEQKIETTGIIDQVDTVEPNSTEPTDNNVFRKLLRGPRYFDPPDSWGTCYNCGEEGHSAVNCKSAKRKKPCFVCGSLEHNARSCGKARDCYICKKVGHRAKDCPEKHKDASSSAAICLKCGDPGHDMFSCRNLYPYDDLKNIQCYICKGFGHLCCVKSTADTSVDISCYKCGQTGHTGLACSRLRGEVSGSVPHSSCYRCGEEGHFARECTSSTKSGKGILEEASGDASTSSCYRCGEQGHFVRECNSSNKGGKRNRELSNPKLRSQIEETNHMGSKSVSHDLSNTHSKKKKINHDEKYTKSPRKSVQKGRWMMEDPDSGNFSHGKFMRNNWNSPATPSRWDHNYYTEYTDHYESPRFSDHYASPRSSGRYASPQSYTKRRTLHPGTPMSLGSSKASQNRFSASRFGGFSNEGRRKSYGWW

Homology

[Close]

BLAST of Sed0019248.1 vs. NCBI nr
Match: XP_008453513.1 (PREDICTED: zinc finger CCHC domain-containing protein 7 isoform X4 [Cucumis melo])

HSP 1 Score: 739.6 bits (1908), Expect = 1.9e-209
Identity = 395/595 (66.39%), Postives = 437/595 (73.45%), Query Frame = 0


Query: 1   MGRK---KKFEFEDEEDDVQGTKDGGSKFINSLSSDDDEANEDLSLKIVEKALRLRSGKL 60
           MGR+   KKF+FED++D++Q  K    KF  SLSSDDDEANEDLSLKIVEKA++LRSGKL
Sbjct: 1   MGRRIKQKKFKFEDDDDELQVLKTVAPKFAKSLSSDDDEANEDLSLKIVEKAMQLRSGKL 60

Query: 61  VAVAGGTK---------GGVAGDEDGEVFSSSLECADPEVPES---------GSKKTVKK 120
           V  AG  K         G VA     E+  SSLE AD +   S          SKKTVKK
Sbjct: 61  VTDAGVNKDGKCEQSGNGDVAAVGAIELVPSSLEGADADAGTSKASADSIATASKKTVKK 120

Query: 121 RKKKVKKLESEERDVVVRDEQKIETTGIIDQVDTVEPNSTEPTDNNVFRKLLRGPRYFDP 180
           RKKKVKKL +EERD VV + +KIETTG+IDQVD+VEPNST  TDNNVFRKLLRGPRYFDP
Sbjct: 121 RKKKVKKLGTEERDAVVTEGEKIETTGVIDQVDSVEPNSTATTDNNVFRKLLRGPRYFDP 180

Query: 181 PDSWGTCYNCGEEGHSAVNCKSAKRKKPCFVCGSLEHNARSCGKARDCYICKKVGHRAKD 240
           PDSWGTCYNCGEEGH+AVNC SAKRK+PCFVCGSLEHNA+SC KARDC+ICKK GHRA  
Sbjct: 181 PDSWGTCYNCGEEGHNAVNCTSAKRKRPCFVCGSLEHNAKSCSKARDCFICKKGGHRANV 240

Query: 241 CPEKHKDASSSAAICLKCGDPGHDMFSCRNLYPYDDLKNIQCYICKGFGHLCCVKSTADT 300
           CPEKHK+ SSS  ICLKCGD GHDMFSC+N Y  DDLK IQCYICK FGHLCCV ST+DT
Sbjct: 241 CPEKHKNVSSSLKICLKCGDSGHDMFSCQNHYADDDLKKIQCYICKKFGHLCCVNSTSDT 300

Query: 301 SVDISCYKCGQTGHTGLACSRLRGEVSGSVPHSSCYRCGEEGHFARECTSSTKS------ 360
           SV +SCYKCGQTGHTGL+CSRLRGE SG+V  S CYRCGEEGHFARECTSSTKS      
Sbjct: 301 SV-VSCYKCGQTGHTGLSCSRLRGEASGAVSSSQCYRCGEEGHFARECTSSTKSGKRNRE 360

Query: 361 ------------------------------GKGILEEASGDASTSSCYRCGEQGHFVREC 420
                                         GK ILEE SG AS SSCYRCGEQGHF R+C
Sbjct: 361 EASGAASPSPCYKCGEEGHFARECTSSTKGGKRILEETSGAASPSSCYRCGEQGHFARDC 420

Query: 421 NSSNKGGKRNRELSNPKLRSQIEETNHMGSKSVSHDLSNTHSKKKKINHDEKYTKSPRKS 480
             S KGGKRNRELSNPK RSQ+EET++MGSKS  HDL   H KKKK+NH+EKY+  PRKS
Sbjct: 421 AGSTKGGKRNRELSNPKWRSQVEETDYMGSKSAPHDLVKAHDKKKKMNHEEKYSDLPRKS 480

Query: 481 VQKGRWMMEDPDSGNFSHGKFMRNNWNSPATPSRWDHNYYTEYTDHYESPRFSDHYASPR 539
            Q+GRWMMEDP   NFSHG F RN+WNSP TPSRW H+YY EY   Y  P FS HYASP+
Sbjct: 481 GQRGRWMMEDP-GPNFSHGTFNRNDWNSPVTPSRWGHDYYAEYNGQYTDPHFSGHYASPQ 540

[Close]

BLAST of Sed0019248.1 vs. NCBI nr
Match: XP_038880631.1 (uncharacterized protein LOC120072267 isoform X4 [Benincasa hispida])

HSP 1 Score: 734.6 bits (1895), Expect = 6.3e-208
Identity = 399/639 (62.44%), Postives = 448/639 (70.11%), Query Frame = 0


Query: 1   MGRK---KKFEFEDEEDDVQGTKDGGSKFINSLSSDDDEANEDLSLKIVEKALRLRSGKL 60
           MGR+   KKF+FED++D++Q      SK  NSLSSDDDEANEDLSLKIVEKA++LRSGKL
Sbjct: 1   MGRRVKQKKFKFEDDDDELQVVNSAASKSANSLSSDDDEANEDLSLKIVEKAMQLRSGKL 60

Query: 61  VAVAG---------GTKGGVAGDEDGEVFSSSLECAD----------------PEVPESG 120
           V  AG           KG + G     + SS+LE AD                 E  E G
Sbjct: 61  VTDAGVNKDVKCEQSGKGDIVGVGAIRLLSSTLEGADADDGTDRASADGIAAASEGRELG 120

Query: 121 SKKTVKKRKKKVKKLESEERDVVVRDEQKIETTGIIDQVDTVEPNSTEPTDNNVFRKLLR 180
           SKKTVKKRKKKVKKL +E+RD+VV +  KI+TTG+ID VD+VEPNSTE TDNNVFRKLLR
Sbjct: 121 SKKTVKKRKKKVKKLGTEDRDMVVTEGAKIKTTGMIDHVDSVEPNSTETTDNNVFRKLLR 180

Query: 181 GPRYFDPPDSWGTCYNCGEEGHSAVNCKSAKRKKPCFVCGSLEHNARSCGKARDCYICKK 240
           GPRYFDPPDSWGTCYNCGEEGH+AVNC SAKRK+PCFVCGSLEHNA+SC KARDC+ICKK
Sbjct: 181 GPRYFDPPDSWGTCYNCGEEGHNAVNCTSAKRKRPCFVCGSLEHNAKSCSKARDCFICKK 240

Query: 241 VGHRAKDCPEKHKDASSSAAICLKCGDPGHDMFSCRNLYPYDDLKNIQCYICKGFGHLCC 300
            GHRA DCPEKH+D SSS  ICLKCGD GHDMFSC+NLYP DDLKNIQCYICK FGHLCC
Sbjct: 241 GGHRANDCPEKHRDVSSSLKICLKCGDSGHDMFSCQNLYPDDDLKNIQCYICKKFGHLCC 300

Query: 301 VKSTADTSVDISCYKCGQTGHTGLACSRLRGEVSGSVPHSSCYRCGEEGHFARECTSSTK 360
           V S + TSV +SCYKCGQTGHTGL+CSRLRG+  G+V  S CYRCGEEGHFARECTSSTK
Sbjct: 301 VNSISGTSV-VSCYKCGQTGHTGLSCSRLRGDAFGAVSPSQCYRCGEEGHFARECTSSTK 360

Query: 361 S------------------------------------GKGILEEASGDASTSSCYRCGEQ 420
           S                                    GK ILEE SG AS SSCY+CGEQ
Sbjct: 361 SGKRSREEASGAASPSPCYRCGEEGHFARECTNSTKAGKRILEETSGAASPSSCYKCGEQ 420

Query: 421 ------------------------------------GHFVRECNSSNKGGKRNRELSNPK 480
                                               GHF REC SS KGGKRNRELSN +
Sbjct: 421 GHFARECTSSTKGGKRIIEETSVAASPSLCYRCGELGHFARECTSSTKGGKRNRELSNSR 480

Query: 481 LRSQIEETNHMGSKSVSHDLSNTHSKKKKINHDEKYTKSPRKSVQKGRWMMEDPDSGNFS 539
            +SQ+EETNHM SKS  HD      KKKKINH+E+Y+  P KS Q GRW++E   SGNF 
Sbjct: 481 SKSQVEETNHMVSKSAPHD------KKKKINHEEQYSNLPSKSGQTGRWILEGSGSGNFF 540

[Close]

BLAST of Sed0019248.1 vs. NCBI nr
Match: XP_008453512.1 (PREDICTED: zinc finger CCHC domain-containing protein 7 isoform X3 [Cucumis melo])

HSP 1 Score: 734.2 bits (1894), Expect = 8.2e-208
Identity = 395/598 (66.05%), Postives = 437/598 (73.08%), Query Frame = 0


Query: 1   MGRK---KKFEFEDEEDDVQGTKDGGSKFINSLSSDDDEANEDLSLKIVEKALRLRSGKL 60
           MGR+   KKF+FED++D++Q  K    KF  SLSSDDDEANEDLSLKIVEKA++LRSGKL
Sbjct: 1   MGRRIKQKKFKFEDDDDELQVLKTVAPKFAKSLSSDDDEANEDLSLKIVEKAMQLRSGKL 60

Query: 61  VAVAGGTK---------GGVAGDEDGEVFSSSLECADPEVPES---------GSKKTVKK 120
           V  AG  K         G VA     E+  SSLE AD +   S          SKKTVKK
Sbjct: 61  VTDAGVNKDGKCEQSGNGDVAAVGAIELVPSSLEGADADAGTSKASADSIATASKKTVKK 120

Query: 121 RKKKVKKLESEERDVVVRDEQKIETTGIIDQVDTVEPNSTEPTDNNVFRKLLRGPRYFDP 180
           RKKKVKKL +EERD VV + +KIETTG+IDQVD+VEPNST  TDNNVFRKLLRGPRYFDP
Sbjct: 121 RKKKVKKLGTEERDAVVTEGEKIETTGVIDQVDSVEPNSTATTDNNVFRKLLRGPRYFDP 180

Query: 181 PDSWGTCYNCGEEGHSAVNCKSAKRKKPCFVCGSLEHNARSCGKARDCYICKKVGHRAKD 240
           PDSWGTCYNCGEEGH+AVNC SAKRK+PCFVCGSLEHNA+SC KARDC+ICKK GHRA  
Sbjct: 181 PDSWGTCYNCGEEGHNAVNCTSAKRKRPCFVCGSLEHNAKSCSKARDCFICKKGGHRANV 240

Query: 241 CPEKHKDASSSAAICLKCGDPGHDMFSCRNLYPYDDLKNIQCYICKGFGHLCCVKSTADT 300
           CPEKHK+ SSS  ICLKCGD GHDMFSC+N Y  DDLK IQCYICK FGHLCCV ST+DT
Sbjct: 241 CPEKHKNVSSSLKICLKCGDSGHDMFSCQNHYADDDLKKIQCYICKKFGHLCCVNSTSDT 300

Query: 301 SVDISCYKCGQTGHTGLACSRLRGEVSGSVPHSSCYRCGEEGHFARECTSSTKS------ 360
           SV +SCYKCGQTGHTGL+CSRLRGE SG+V  S CYRCGEEGHFARECTSSTKS      
Sbjct: 301 SV-VSCYKCGQTGHTGLSCSRLRGEASGAVSSSQCYRCGEEGHFARECTSSTKSGKRNRE 360

Query: 361 ------------------------------GKGILEEASGDASTSSCYRCGEQGHFVREC 420
                                         GK ILEE SG AS SSCYRCGEQGHF R+C
Sbjct: 361 EASGAASPSPCYKCGEEGHFARECTSSTKGGKRILEETSGAASPSSCYRCGEQGHFARDC 420

Query: 421 NSSNK---GGKRNRELSNPKLRSQIEETNHMGSKSVSHDLSNTHSKKKKINHDEKYTKSP 480
             S K   GGKRNRELSNPK RSQ+EET++MGSKS  HDL   H KKKK+NH+EKY+  P
Sbjct: 421 AGSTKLAQGGKRNRELSNPKWRSQVEETDYMGSKSAPHDLVKAHDKKKKMNHEEKYSDLP 480

Query: 481 RKSVQKGRWMMEDPDSGNFSHGKFMRNNWNSPATPSRWDHNYYTEYTDHYESPRFSDHYA 539
           RKS Q+GRWMMEDP   NFSHG F RN+WNSP TPSRW H+YY EY   Y  P FS HYA
Sbjct: 481 RKSGQRGRWMMEDP-GPNFSHGTFNRNDWNSPVTPSRWGHDYYAEYNGQYTDPHFSGHYA 540

[Close]

BLAST of Sed0019248.1 vs. NCBI nr
Match: XP_038880630.1 (uncharacterized protein LOC120072267 isoform X3 [Benincasa hispida])

HSP 1 Score: 733.4 bits (1892), Expect = 1.4e-207
Identity = 399/642 (62.15%), Postives = 448/642 (69.78%), Query Frame = 0


Query: 1   MGRK---KKFEFEDEEDDVQGTKDGGSKFINSLSSDDDEANEDLSLKIVEKALRLRSGKL 60
           MGR+   KKF+FED++D++Q      SK  NSLSSDDDEANEDLSLKIVEKA++LRSGKL
Sbjct: 1   MGRRVKQKKFKFEDDDDELQVVNSAASKSANSLSSDDDEANEDLSLKIVEKAMQLRSGKL 60

Query: 61  VAVAG---------GTKGGVAGDEDGEVFSSSLECAD----------------PEVPESG 120
           V  AG           KG + G     + SS+LE AD                 E  E G
Sbjct: 61  VTDAGVNKDVKCEQSGKGDIVGVGAIRLLSSTLEGADADDGTDRASADGIAAASEGRELG 120

Query: 121 SKKTVKKRKKKVKKLESEERDVVVRDEQKIETTGIIDQVDTVEPNSTEPTDNNVFRKLLR 180
           SKKTVKKRKKKVKKL +E+RD+VV +  KI+TTG+ID VD+VEPNSTE TDNNVFRKLLR
Sbjct: 121 SKKTVKKRKKKVKKLGTEDRDMVVTEGAKIKTTGMIDHVDSVEPNSTETTDNNVFRKLLR 180

Query: 181 GPRYFDPPDSWGTCYNCGEEGHSAVNCKSAKRKKPCFVCGSLEHNARSCGKARDCYICKK 240
           GPRYFDPPDSWGTCYNCGEEGH+AVNC SAKRK+PCFVCGSLEHNA+SC KARDC+ICKK
Sbjct: 181 GPRYFDPPDSWGTCYNCGEEGHNAVNCTSAKRKRPCFVCGSLEHNAKSCSKARDCFICKK 240

Query: 241 VGHRAKDCPEKHKDASSSAAICLKCGDPGHDMFSCRNLYPYDDLKNIQCYICKGFGHLCC 300
            GHRA DCPEKH+D SSS  ICLKCGD GHDMFSC+NLYP DDLKNIQCYICK FGHLCC
Sbjct: 241 GGHRANDCPEKHRDVSSSLKICLKCGDSGHDMFSCQNLYPDDDLKNIQCYICKKFGHLCC 300

Query: 301 VKSTADTSVDISCYKCGQTGHTGLACSRLRGEVSGSVPHSSCYRCGEEGHFARECTSSTK 360
           V S + TSV +SCYKCGQTGHTGL+CSRLRG+  G+V  S CYRCGEEGHFARECTSSTK
Sbjct: 301 VNSISGTSV-VSCYKCGQTGHTGLSCSRLRGDAFGAVSPSQCYRCGEEGHFARECTSSTK 360

Query: 361 S---------------------------------------GKGILEEASGDASTSSCYRC 420
           S                                       GK ILEE SG AS SSCY+C
Sbjct: 361 SGKRSREEASGAASPSPCYRCGEEGHFARECTNSTKLAQAGKRILEETSGAASPSSCYKC 420

Query: 421 GEQ------------------------------------GHFVRECNSSNKGGKRNRELS 480
           GEQ                                    GHF REC SS KGGKRNRELS
Sbjct: 421 GEQGHFARECTSSTKGGKRIIEETSVAASPSLCYRCGELGHFARECTSSTKGGKRNRELS 480

Query: 481 NPKLRSQIEETNHMGSKSVSHDLSNTHSKKKKINHDEKYTKSPRKSVQKGRWMMEDPDSG 539
           N + +SQ+EETNHM SKS  HD      KKKKINH+E+Y+  P KS Q GRW++E   SG
Sbjct: 481 NSRSKSQVEETNHMVSKSAPHD------KKKKINHEEQYSNLPSKSGQTGRWILEGSGSG 540

[Close]

BLAST of Sed0019248.1 vs. NCBI nr
Match: XP_038880629.1 (uncharacterized protein LOC120072267 isoform X2 [Benincasa hispida])

HSP 1 Score: 732.6 bits (1890), Expect = 2.4e-207
Identity = 398/642 (61.99%), Postives = 448/642 (69.78%), Query Frame = 0


Query: 1   MGRK---KKFEFEDEEDDVQGTKDGGSKFINSLSSDDDEANEDLSLKIVEKALRLRSGKL 60
           MGR+   KKF+FED++D++Q      SK  NSLSSDDDEANEDLSLKIVEKA++LRSGKL
Sbjct: 1   MGRRVKQKKFKFEDDDDELQVVNSAASKSANSLSSDDDEANEDLSLKIVEKAMQLRSGKL 60

Query: 61  VAVAG---------GTKGGVAGDEDGEVFSSSLECAD----------------PEVPESG 120
           V  AG           KG + G     + SS+LE AD                 E  E G
Sbjct: 61  VTDAGVNKDVKCEQSGKGDIVGVGAIRLLSSTLEGADADDGTDRASADGIAAASEGRELG 120

Query: 121 SKKTVKKRKKKVKKLESEERDVVVRDEQKIETTGIIDQVDTVEPNSTEPTDNNVFRKLLR 180
           SKKTVKKRKKKVKKL +E+RD+VV +  KI+TTG+ID VD+VEPNSTE TDNNVFRKLLR
Sbjct: 121 SKKTVKKRKKKVKKLGTEDRDMVVTEGAKIKTTGMIDHVDSVEPNSTETTDNNVFRKLLR 180

Query: 181 GPRYFDPPDSWGTCYNCGEEGHSAVNCKSAKRKKPCFVCGSLEHNARSCGKARDCYICKK 240
           GPRYFDPPDSWGTCYNCGEEGH+AVNC SAKRK+PCFVCGSLEHNA+SC KARDC+ICKK
Sbjct: 181 GPRYFDPPDSWGTCYNCGEEGHNAVNCTSAKRKRPCFVCGSLEHNAKSCSKARDCFICKK 240

Query: 241 VGHRAKDCPEKHKDASSSAAICLKCGDPGHDMFSCRNLYPYDDLKNIQCYICKGFGHLCC 300
            GHRA DCPEKH+D SSS  ICLKCGD GHDMFSC+NLYP DDLKNIQCYICK FGHLCC
Sbjct: 241 GGHRANDCPEKHRDVSSSLKICLKCGDSGHDMFSCQNLYPDDDLKNIQCYICKKFGHLCC 300

Query: 301 VKSTADTSVDISCYKCGQTGHTGLACSRLRG----------------------------- 360
           V S + TSV +SCYKCGQTGHTGL+CSRLRG                             
Sbjct: 301 VNSISGTSV-VSCYKCGQTGHTGLSCSRLRGDAFGAVSPSQCYRCGEEGHFARECTSSTK 360

Query: 361 ----------EVSGSVPHSSCYRCGEEGHFARECTSSTKSGKGILEEASGDASTSSCYRC 420
                     E SG+   S CYRCGEEGHFARECT+STK+GK ILEE SG AS SSCY+C
Sbjct: 361 LAQSGKRSREEASGAASPSPCYRCGEEGHFARECTNSTKAGKRILEETSGAASPSSCYKC 420

Query: 421 GEQ------------------------------------GHFVRECNSSNKGGKRNRELS 480
           GEQ                                    GHF REC SS KGGKRNRELS
Sbjct: 421 GEQGHFARECTSSTKGGKRIIEETSVAASPSLCYRCGELGHFARECTSSTKGGKRNRELS 480

Query: 481 NPKLRSQIEETNHMGSKSVSHDLSNTHSKKKKINHDEKYTKSPRKSVQKGRWMMEDPDSG 539
           N + +SQ+EETNHM SKS  HD      KKKKINH+E+Y+  P KS Q GRW++E   SG
Sbjct: 481 NSRSKSQVEETNHMVSKSAPHD------KKKKINHEEQYSNLPSKSGQTGRWILEGSGSG 540

[Close]

BLAST of Sed0019248.1 vs. ExPASy Swiss-Prot
Match: Q04832 (DNA-binding protein HEXBP OS=Leishmania major OX=5664 GN=HEXBP PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 3.3e-26
Identity = 81/247 (32.79%), Postives = 107/247 (43.32%), Query Frame = 0


Query: 161 DSWGTCYNCGEEGHSAVNC-----KSAKRKKPCFVCGSLEHNARSC--------GKARDC 220
           +S  +C NCG+EGH A  C     K  +R   CF CG   H +R C          A  C
Sbjct: 13  ESSTSCRNCGKEGHYARECPEADSKGDERSTTCFRCGEEGHMSRECPNEARSGAAGAMTC 72

Query: 221 YICKKVGHRAKDCPEKHKDASSSAAICLKCGDPGHDMFSC-------RNLYPYDDLK--- 280
           + C + GH ++DCP   K  ++    C KCG  GH    C       R  Y     +   
Sbjct: 73  FRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGA 132

Query: 281 ------NIQCYICKGFGHLC--CVKSTADTS--VDISCYKCGQTGHTGLACSRLRGEVSG 340
                 +  CY C   GH+   C       S   D +CYKCG  GH    C   +G  SG
Sbjct: 133 QGGYSGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSG 192

Query: 341 SVPHSSCYRCGEEGHFARECTSSTKSGKGILEEASGDASTSSCYRCGEQGHFVRECNSS- 373
           +     CY+CGE GH +REC S+  +G G            +CY+CG+ GH  REC  + 
Sbjct: 193 A-GDRKCYKCGESGHMSRECPSAGSTGSG----------DRACYKCGKPGHISRECPEAG 248

[Close]

BLAST of Sed0019248.1 vs. ExPASy Swiss-Prot
Match: Q3T0Q6 (Cellular nucleic acid-binding protein OS=Bos taurus OX=9913 GN=CNBP PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.9e-21
Identity = 63/185 (34.05%), Postives = 78/185 (42.16%), Query Frame = 0


Query: 166 CYNCGEEGHSAVNCK-------------------SAKRKKPCFVCGSLEHNARSCGKARD 225
           C+ CG  GH A  C                    S+     C+ CG   H A+ C    D
Sbjct: 6   CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65

Query: 226 -CYICKKVGHRAKDCPEKHKDASSSAAICLKCGDPGHDMFSCRNLYPYDDLKNIQCYICK 285
            CY C + GH AKDC E  ++       C  CG PGH    C      D     +CY C 
Sbjct: 66  ACYNCGRGGHIAKDCKEPKREREQ---CCYNCGKPGHLARDC------DHADEQKCYSCG 125

Query: 286 GFGHL--CCVKSTADTSVDISCYKCGQTGHTGLACSRLRGEVSGSVPHSSCYRCGEEGHF 329
            FGH+   C K        + CY+CG+TGH  + CS+            +CYRCGE GH 
Sbjct: 126 EFGHIQKDCTK--------VKCYRCGETGHVAINCSK--------TSEVNCYRCGESGHL 165

[Close]

BLAST of Sed0019248.1 vs. ExPASy Swiss-Prot
Match: O42395 (Cellular nucleic acid-binding protein OS=Gallus gallus OX=9031 GN=CNBP PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 4.2e-21
Identity = 63/187 (33.69%), Postives = 78/187 (41.71%), Query Frame = 0


Query: 166 CYNCGEEGHSAVNC--------------------KSAKRKKPCFVCGSLEHNARSCGKAR 225
           C+ CG  GH A  C                     S+     C+ CG   H A+ C    
Sbjct: 6   CFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDCDLQE 65

Query: 226 D--CYICKKVGHRAKDCPEKHKDASSSAAICLKCGDPGHDMFSCRNLYPYDDLKNIQCYI 285
           D  CY C + GH AKDC E  ++       C  CG PGH    C      D     +CY 
Sbjct: 66  DKACYNCGRGGHIAKDCKEPKREREQ---CCYNCGKPGHLARDC------DHADEQKCYS 125

Query: 286 CKGFGHL--CCVKSTADTSVDISCYKCGQTGHTGLACSRLRGEVSGSVPHSSCYRCGEEG 329
           C  FGH+   C K        + CY+CG+TGH  + CS+            +CYRCGE G
Sbjct: 126 CGEFGHIQKDCTK--------VKCYRCGETGHVAINCSK--------TSEVNCYRCGESG 167

[Close]

BLAST of Sed0019248.1 vs. ExPASy Swiss-Prot
Match: Q94C69 (Cold shock domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=CSP3 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 7.1e-21
Identity = 72/220 (32.73%), Postives = 95/220 (43.18%), Query Frame = 0


Query: 162 SWGTCYNCGEEGHSAVNCKSAKRKKPCFVCGSLEHNARSCGKARDCYICKKVGHRAKDCP 221
           S G C+NCGE GH A +C      K  F  G      R  G   +CY+C  VGH A+DC 
Sbjct: 92  SGGNCFNCGEVGHMAKDCDGGSGGK-SFGGG----GGRRSGGEGECYMCGDVGHFARDCR 151

Query: 222 EKHKDASSSAA----ICLKCGDPGHDMFSCR-----NLYPYDDLKNI---QCYICKGFGH 281
           +     S         C  CG+ GH    CR     N Y     +      CY+C G GH
Sbjct: 152 QSGGGNSGGGGGGGRPCYSCGEVGHLAKDCRGGSGGNRYGGGGGRGSGGDGCYMCGGVGH 211

Query: 282 LC--CVKSTADT--SVDISCYKCGQTGHTGLACSRLRGEVSGSVPHSSCYRCGEEGHFAR 341
               C ++          +CY CG  GH    C+  +    G     +CY CG  GH AR
Sbjct: 212 FARDCRQNGGGNVGGGGSTCYTCGGVGHIAKVCTS-KIPSGGGGGGRACYECGGTGHLAR 271

Query: 342 ECTSSTKSGKGILEEASGDASTSSCYRCGEQGHFVRECNS 366
           +C    + G G    + G   ++ C+ CG++GHF REC S
Sbjct: 272 DC---DRRGSG---SSGGGGGSNKCFICGKEGHFARECTS 299

[Close]

BLAST of Sed0019248.1 vs. ExPASy Swiss-Prot
Match: P62633 (Cellular nucleic acid-binding protein OS=Homo sapiens OX=9606 GN=CNBP PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.2e-20
Identity = 63/192 (32.81%), Postives = 78/192 (40.62%), Query Frame = 0


Query: 166 CYNCGEEGHSAVNCK--------------------------SAKRKKPCFVCGSLEHNAR 225
           C+ CG  GH A  C                           S+     C+ CG   H A+
Sbjct: 6   CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65

Query: 226 SCGKARD-CYICKKVGHRAKDCPEKHKDASSSAAICLKCGDPGHDMFSCRNLYPYDDLKN 285
            C    D CY C + GH AKDC E  ++       C  CG PGH    C      D    
Sbjct: 66  DCDLQEDACYNCGRGGHIAKDCKEPKREREQ---CCYNCGKPGHLARDC------DHADE 125

Query: 286 IQCYICKGFGHL--CCVKSTADTSVDISCYKCGQTGHTGLACSRLRGEVSGSVPHSSCYR 329
            +CY C  FGH+   C K        + CY+CG+TGH  + CS+            +CYR
Sbjct: 126 QKCYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSK--------TSEVNCYR 172

[Close]

BLAST of Sed0019248.1 vs. ExPASy TrEMBL
Match: A0A1S3BVV3 (zinc finger CCHC domain-containing protein 7 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103494199 PE=4 SV=1)

HSP 1 Score: 739.6 bits (1908), Expect = 9.4e-210
Identity = 395/595 (66.39%), Postives = 437/595 (73.45%), Query Frame = 0


Query: 1   MGRK---KKFEFEDEEDDVQGTKDGGSKFINSLSSDDDEANEDLSLKIVEKALRLRSGKL 60
           MGR+   KKF+FED++D++Q  K    KF  SLSSDDDEANEDLSLKIVEKA++LRSGKL
Sbjct: 1   MGRRIKQKKFKFEDDDDELQVLKTVAPKFAKSLSSDDDEANEDLSLKIVEKAMQLRSGKL 60

Query: 61  VAVAGGTK---------GGVAGDEDGEVFSSSLECADPEVPES---------GSKKTVKK 120
           V  AG  K         G VA     E+  SSLE AD +   S          SKKTVKK
Sbjct: 61  VTDAGVNKDGKCEQSGNGDVAAVGAIELVPSSLEGADADAGTSKASADSIATASKKTVKK 120

Query: 121 RKKKVKKLESEERDVVVRDEQKIETTGIIDQVDTVEPNSTEPTDNNVFRKLLRGPRYFDP 180
           RKKKVKKL +EERD VV + +KIETTG+IDQVD+VEPNST  TDNNVFRKLLRGPRYFDP
Sbjct: 121 RKKKVKKLGTEERDAVVTEGEKIETTGVIDQVDSVEPNSTATTDNNVFRKLLRGPRYFDP 180

Query: 181 PDSWGTCYNCGEEGHSAVNCKSAKRKKPCFVCGSLEHNARSCGKARDCYICKKVGHRAKD 240
           PDSWGTCYNCGEEGH+AVNC SAKRK+PCFVCGSLEHNA+SC KARDC+ICKK GHRA  
Sbjct: 181 PDSWGTCYNCGEEGHNAVNCTSAKRKRPCFVCGSLEHNAKSCSKARDCFICKKGGHRANV 240

Query: 241 CPEKHKDASSSAAICLKCGDPGHDMFSCRNLYPYDDLKNIQCYICKGFGHLCCVKSTADT 300
           CPEKHK+ SSS  ICLKCGD GHDMFSC+N Y  DDLK IQCYICK FGHLCCV ST+DT
Sbjct: 241 CPEKHKNVSSSLKICLKCGDSGHDMFSCQNHYADDDLKKIQCYICKKFGHLCCVNSTSDT 300

Query: 301 SVDISCYKCGQTGHTGLACSRLRGEVSGSVPHSSCYRCGEEGHFARECTSSTKS------ 360
           SV +SCYKCGQTGHTGL+CSRLRGE SG+V  S CYRCGEEGHFARECTSSTKS      
Sbjct: 301 SV-VSCYKCGQTGHTGLSCSRLRGEASGAVSSSQCYRCGEEGHFARECTSSTKSGKRNRE 360

Query: 361 ------------------------------GKGILEEASGDASTSSCYRCGEQGHFVREC 420
                                         GK ILEE SG AS SSCYRCGEQGHF R+C
Sbjct: 361 EASGAASPSPCYKCGEEGHFARECTSSTKGGKRILEETSGAASPSSCYRCGEQGHFARDC 420

Query: 421 NSSNKGGKRNRELSNPKLRSQIEETNHMGSKSVSHDLSNTHSKKKKINHDEKYTKSPRKS 480
             S KGGKRNRELSNPK RSQ+EET++MGSKS  HDL   H KKKK+NH+EKY+  PRKS
Sbjct: 421 AGSTKGGKRNRELSNPKWRSQVEETDYMGSKSAPHDLVKAHDKKKKMNHEEKYSDLPRKS 480

Query: 481 VQKGRWMMEDPDSGNFSHGKFMRNNWNSPATPSRWDHNYYTEYTDHYESPRFSDHYASPR 539
            Q+GRWMMEDP   NFSHG F RN+WNSP TPSRW H+YY EY   Y  P FS HYASP+
Sbjct: 481 GQRGRWMMEDP-GPNFSHGTFNRNDWNSPVTPSRWGHDYYAEYNGQYTDPHFSGHYASPQ 540

[Close]

BLAST of Sed0019248.1 vs. ExPASy TrEMBL
Match: A0A1S3BXL1 (zinc finger CCHC domain-containing protein 7 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103494199 PE=4 SV=1)

HSP 1 Score: 734.2 bits (1894), Expect = 4.0e-208
Identity = 395/598 (66.05%), Postives = 437/598 (73.08%), Query Frame = 0


Query: 1   MGRK---KKFEFEDEEDDVQGTKDGGSKFINSLSSDDDEANEDLSLKIVEKALRLRSGKL 60
           MGR+   KKF+FED++D++Q  K    KF  SLSSDDDEANEDLSLKIVEKA++LRSGKL
Sbjct: 1   MGRRIKQKKFKFEDDDDELQVLKTVAPKFAKSLSSDDDEANEDLSLKIVEKAMQLRSGKL 60

Query: 61  VAVAGGTK---------GGVAGDEDGEVFSSSLECADPEVPES---------GSKKTVKK 120
           V  AG  K         G VA     E+  SSLE AD +   S          SKKTVKK
Sbjct: 61  VTDAGVNKDGKCEQSGNGDVAAVGAIELVPSSLEGADADAGTSKASADSIATASKKTVKK 120

Query: 121 RKKKVKKLESEERDVVVRDEQKIETTGIIDQVDTVEPNSTEPTDNNVFRKLLRGPRYFDP 180
           RKKKVKKL +EERD VV + +KIETTG+IDQVD+VEPNST  TDNNVFRKLLRGPRYFDP
Sbjct: 121 RKKKVKKLGTEERDAVVTEGEKIETTGVIDQVDSVEPNSTATTDNNVFRKLLRGPRYFDP 180

Query: 181 PDSWGTCYNCGEEGHSAVNCKSAKRKKPCFVCGSLEHNARSCGKARDCYICKKVGHRAKD 240
           PDSWGTCYNCGEEGH+AVNC SAKRK+PCFVCGSLEHNA+SC KARDC+ICKK GHRA  
Sbjct: 181 PDSWGTCYNCGEEGHNAVNCTSAKRKRPCFVCGSLEHNAKSCSKARDCFICKKGGHRANV 240

Query: 241 CPEKHKDASSSAAICLKCGDPGHDMFSCRNLYPYDDLKNIQCYICKGFGHLCCVKSTADT 300
           CPEKHK+ SSS  ICLKCGD GHDMFSC+N Y  DDLK IQCYICK FGHLCCV ST+DT
Sbjct: 241 CPEKHKNVSSSLKICLKCGDSGHDMFSCQNHYADDDLKKIQCYICKKFGHLCCVNSTSDT 300

Query: 301 SVDISCYKCGQTGHTGLACSRLRGEVSGSVPHSSCYRCGEEGHFARECTSSTKS------ 360
           SV +SCYKCGQTGHTGL+CSRLRGE SG+V  S CYRCGEEGHFARECTSSTKS      
Sbjct: 301 SV-VSCYKCGQTGHTGLSCSRLRGEASGAVSSSQCYRCGEEGHFARECTSSTKSGKRNRE 360

Query: 361 ------------------------------GKGILEEASGDASTSSCYRCGEQGHFVREC 420
                                         GK ILEE SG AS SSCYRCGEQGHF R+C
Sbjct: 361 EASGAASPSPCYKCGEEGHFARECTSSTKGGKRILEETSGAASPSSCYRCGEQGHFARDC 420

Query: 421 NSSNK---GGKRNRELSNPKLRSQIEETNHMGSKSVSHDLSNTHSKKKKINHDEKYTKSP 480
             S K   GGKRNRELSNPK RSQ+EET++MGSKS  HDL   H KKKK+NH+EKY+  P
Sbjct: 421 AGSTKLAQGGKRNRELSNPKWRSQVEETDYMGSKSAPHDLVKAHDKKKKMNHEEKYSDLP 480

Query: 481 RKSVQKGRWMMEDPDSGNFSHGKFMRNNWNSPATPSRWDHNYYTEYTDHYESPRFSDHYA 539
           RKS Q+GRWMMEDP   NFSHG F RN+WNSP TPSRW H+YY EY   Y  P FS HYA
Sbjct: 481 RKSGQRGRWMMEDP-GPNFSHGTFNRNDWNSPVTPSRWGHDYYAEYNGQYTDPHFSGHYA 540

[Close]

BLAST of Sed0019248.1 vs. ExPASy TrEMBL
Match: A0A5A7UTU3 (Zinc finger CCHC domain-containing protein 7 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004740 PE=4 SV=1)

HSP 1 Score: 724.9 bits (1870), Expect = 2.4e-205
Identity = 397/631 (62.92%), Postives = 438/631 (69.41%), Query Frame = 0


Query: 1   MGRK---KKFEFEDEEDDVQGTKDGGSKFINSLSSDDDEANEDLSLKIVEKALRLRSGKL 60
           MGR+   KKF+FED++D++Q  K    KF  SLSSDDDEANEDLSLKIVEKA++LRSGKL
Sbjct: 1   MGRRIKQKKFKFEDDDDELQVLKTVAPKFAKSLSSDDDEANEDLSLKIVEKAMQLRSGKL 60

Query: 61  VAVAGGTK---------GGVAGDEDGEVFSSSLECADPEVPES---------GSKKTVKK 120
           V  AG  K         G VA     E+  SSLE AD +   S          SKKTVKK
Sbjct: 61  VTDAGVNKDGKCEQSGNGDVAAVGAIELVPSSLEGADADAGTSKASADSIATASKKTVKK 120

Query: 121 RKKKVKKLESEERDVVVRDEQKIETTGIIDQVDTVEPNSTEPTDNNVFRKLLRGPRYFDP 180
           RKKKVKKL +EERD VV + +KIETTG+IDQVD+VEPNST  TDNNVFRKLLRGPRYFDP
Sbjct: 121 RKKKVKKLGTEERDAVVTEGEKIETTGVIDQVDSVEPNSTATTDNNVFRKLLRGPRYFDP 180

Query: 181 PDSWGTCYNCGEEGHSAVNCKSAKRKKPCFVCGSLEHNARSCGKARDCYICKKVGHRAKD 240
           PDSWGTCYNCGEEGH+AVNC SAKRK+PCFVCGSLEHNA+SC KARDC+ICKK GHRA  
Sbjct: 181 PDSWGTCYNCGEEGHNAVNCTSAKRKRPCFVCGSLEHNAKSCSKARDCFICKKGGHRANV 240

Query: 241 CPEKHKDASSSAAICLKCGDPGHDMFSCRNLYPYDDLKNIQCYICKGFGHLCCVKSTADT 300
           CPEKHK+ SSS  ICLKCGD GHDMFSC+N Y  DDLK IQCYICK FGHLCCV ST+DT
Sbjct: 241 CPEKHKNVSSSLKICLKCGDSGHDMFSCQNHYADDDLKKIQCYICKKFGHLCCVNSTSDT 300

Query: 301 SVDISCYKCGQTGHTGLACSRLRGEVSGSVPHSSCYRCGEEGHFARECTSSTKS------ 360
           SV +SCYKCGQTGHTGL+CSRLRGE SG+V  S CYRCGEEGHFARECTSSTKS      
Sbjct: 301 SV-VSCYKCGQTGHTGLSCSRLRGEASGAVSSSQCYRCGEEGHFARECTSSTKSGKRNRE 360

Query: 361 ------------------------------GKGILEEASGDASTSSCYRCGEQ------- 420
                                         GK ILEE SG AS SSCYRCGEQ       
Sbjct: 361 EASGAASPSPCYKCGEEGHFARECTSSTKGGKRILEETSGAASPSSCYRCGEQGHFARDC 420

Query: 421 -----------------------------GHFVRECNSSNKGGKRNRELSNPKLRSQIEE 480
                                        GHF REC SS KGGKRNRELSNPK RSQ+EE
Sbjct: 421 AGSTKGGKRIIEEPSVFSSPSLCYRCGELGHFARECTSSTKGGKRNRELSNPKWRSQVEE 480

Query: 481 TNHMGSKSVSHDLSNTHSKKKKINHDEKYTKSPRKSVQKGRWMMEDPDSGNFSHGKFMRN 539
           T++MGSKS  HDL   H KKKK+NH+EKY+  PRKS Q+GRWMMEDP   NFSHG F RN
Sbjct: 481 TDYMGSKSAPHDLVKAHDKKKKMNHEEKYSDLPRKSGQRGRWMMEDP-GPNFSHGTFNRN 540

[Close]

BLAST of Sed0019248.1 vs. ExPASy TrEMBL
Match: A0A1S3BX80 (zinc finger CCHC domain-containing protein 7 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494199 PE=4 SV=1)

HSP 1 Score: 724.9 bits (1870), Expect = 2.4e-205
Identity = 397/631 (62.92%), Postives = 438/631 (69.41%), Query Frame = 0


Query: 1   MGRK---KKFEFEDEEDDVQGTKDGGSKFINSLSSDDDEANEDLSLKIVEKALRLRSGKL 60
           MGR+   KKF+FED++D++Q  K    KF  SLSSDDDEANEDLSLKIVEKA++LRSGKL
Sbjct: 1   MGRRIKQKKFKFEDDDDELQVLKTVAPKFAKSLSSDDDEANEDLSLKIVEKAMQLRSGKL 60

Query: 61  VAVAGGTK---------GGVAGDEDGEVFSSSLECADPEVPES---------GSKKTVKK 120
           V  AG  K         G VA     E+  SSLE AD +   S          SKKTVKK
Sbjct: 61  VTDAGVNKDGKCEQSGNGDVAAVGAIELVPSSLEGADADAGTSKASADSIATASKKTVKK 120

Query: 121 RKKKVKKLESEERDVVVRDEQKIETTGIIDQVDTVEPNSTEPTDNNVFRKLLRGPRYFDP 180
           RKKKVKKL +EERD VV + +KIETTG+IDQVD+VEPNST  TDNNVFRKLLRGPRYFDP
Sbjct: 121 RKKKVKKLGTEERDAVVTEGEKIETTGVIDQVDSVEPNSTATTDNNVFRKLLRGPRYFDP 180

Query: 181 PDSWGTCYNCGEEGHSAVNCKSAKRKKPCFVCGSLEHNARSCGKARDCYICKKVGHRAKD 240
           PDSWGTCYNCGEEGH+AVNC SAKRK+PCFVCGSLEHNA+SC KARDC+ICKK GHRA  
Sbjct: 181 PDSWGTCYNCGEEGHNAVNCTSAKRKRPCFVCGSLEHNAKSCSKARDCFICKKGGHRANV 240

Query: 241 CPEKHKDASSSAAICLKCGDPGHDMFSCRNLYPYDDLKNIQCYICKGFGHLCCVKSTADT 300
           CPEKHK+ SSS  ICLKCGD GHDMFSC+N Y  DDLK IQCYICK FGHLCCV ST+DT
Sbjct: 241 CPEKHKNVSSSLKICLKCGDSGHDMFSCQNHYADDDLKKIQCYICKKFGHLCCVNSTSDT 300

Query: 301 SVDISCYKCGQTGHTGLACSRLRGEVSGSVPHSSCYRCGEEGHFARECTSSTKS------ 360
           SV +SCYKCGQTGHTGL+CSRLRGE SG+V  S CYRCGEEGHFARECTSSTKS      
Sbjct: 301 SV-VSCYKCGQTGHTGLSCSRLRGEASGAVSSSQCYRCGEEGHFARECTSSTKSGKRNRE 360

Query: 361 ------------------------------GKGILEEASGDASTSSCYRCGEQ------- 420
                                         GK ILEE SG AS SSCYRCGEQ       
Sbjct: 361 EASGAASPSPCYKCGEEGHFARECTSSTKGGKRILEETSGAASPSSCYRCGEQGHFARDC 420

Query: 421 -----------------------------GHFVRECNSSNKGGKRNRELSNPKLRSQIEE 480
                                        GHF REC SS KGGKRNRELSNPK RSQ+EE
Sbjct: 421 AGSTKGGKRIIEEPSVFSSPSLCYRCGELGHFARECTSSTKGGKRNRELSNPKWRSQVEE 480

Query: 481 TNHMGSKSVSHDLSNTHSKKKKINHDEKYTKSPRKSVQKGRWMMEDPDSGNFSHGKFMRN 539
           T++MGSKS  HDL   H KKKK+NH+EKY+  PRKS Q+GRWMMEDP   NFSHG F RN
Sbjct: 481 TDYMGSKSAPHDLVKAHDKKKKMNHEEKYSDLPRKSGQRGRWMMEDP-GPNFSHGTFNRN 540

[Close]

BLAST of Sed0019248.1 vs. ExPASy TrEMBL
Match: A0A5D3DYV3 (Zinc finger CCHC domain-containing protein 7 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001560 PE=4 SV=1)

HSP 1 Score: 723.8 bits (1867), Expect = 5.4e-205
Identity = 397/631 (62.92%), Postives = 437/631 (69.26%), Query Frame = 0


Query: 1   MGRK---KKFEFEDEEDDVQGTKDGGSKFINSLSSDDDEANEDLSLKIVEKALRLRSGKL 60
           MGR+   KKF+FED++D++Q  K    K   SLSSDDDEANEDLSLKIVEKA++LRSGKL
Sbjct: 1   MGRRIKQKKFKFEDDDDELQVLKTVAPKSAKSLSSDDDEANEDLSLKIVEKAMQLRSGKL 60

Query: 61  VAVAGGTK---------GGVAGDEDGEVFSSSLECADPEVPES---------GSKKTVKK 120
           V  AG  K         G VA     E+  SSLE AD +   S          SKKTVKK
Sbjct: 61  VTDAGVNKDGKCEQSGNGDVAAVGAIELVPSSLEGADADAGTSKASADSIATASKKTVKK 120

Query: 121 RKKKVKKLESEERDVVVRDEQKIETTGIIDQVDTVEPNSTEPTDNNVFRKLLRGPRYFDP 180
           RKKKVKKL +EERD VV + +KIETTG+IDQVD+VEPNST  TDNNVFRKLLRGPRYFDP
Sbjct: 121 RKKKVKKLGTEERDAVVTEGEKIETTGVIDQVDSVEPNSTATTDNNVFRKLLRGPRYFDP 180

Query: 181 PDSWGTCYNCGEEGHSAVNCKSAKRKKPCFVCGSLEHNARSCGKARDCYICKKVGHRAKD 240
           PDSWGTCYNCGEEGH+AVNC SAKRK+PCFVCGSLEHNA+SC KARDC+ICKK GHRA  
Sbjct: 181 PDSWGTCYNCGEEGHNAVNCTSAKRKRPCFVCGSLEHNAKSCSKARDCFICKKGGHRANV 240

Query: 241 CPEKHKDASSSAAICLKCGDPGHDMFSCRNLYPYDDLKNIQCYICKGFGHLCCVKSTADT 300
           CPEKHK+ SSS  ICLKCGD GHDMFSC+N Y  DDLK IQCYICK FGHLCCV ST+DT
Sbjct: 241 CPEKHKNVSSSLKICLKCGDSGHDMFSCQNHYADDDLKKIQCYICKKFGHLCCVNSTSDT 300

Query: 301 SVDISCYKCGQTGHTGLACSRLRGEVSGSVPHSSCYRCGEEGHFARECTSSTKS------ 360
           SV +SCYKCGQTGHTGL+CSRLRGE SG+V  S CYRCGEEGHFARECTSSTKS      
Sbjct: 301 SV-VSCYKCGQTGHTGLSCSRLRGEASGAVSSSQCYRCGEEGHFARECTSSTKSGKRNRE 360

Query: 361 ------------------------------GKGILEEASGDASTSSCYRCGEQ------- 420
                                         GK ILEE SG AS SSCYRCGEQ       
Sbjct: 361 EASGAASPSPCYKCGEEGHFARECTSSTKGGKRILEETSGAASPSSCYRCGEQGHFAREC 420

Query: 421 -----------------------------GHFVRECNSSNKGGKRNRELSNPKLRSQIEE 480
                                        GHF REC SS KGGKRNRELSNPK RSQ+EE
Sbjct: 421 AGSTKGGKRIIEEPSVFSSPSLCYRCGELGHFARECTSSTKGGKRNRELSNPKWRSQVEE 480

Query: 481 TNHMGSKSVSHDLSNTHSKKKKINHDEKYTKSPRKSVQKGRWMMEDPDSGNFSHGKFMRN 539
           T++MGSKS  HDL   H KKKK+NH+EKY+  PRKS Q+GRWMMEDP   NFSHG F RN
Sbjct: 481 TDYMGSKSAPHDLVKAHDKKKKMNHEEKYSDLPRKSGQRGRWMMEDP-GPNFSHGTFNRN 540

[Close]

BLAST of Sed0019248.1 vs. TAIR 10
Match: AT3G43590.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 357.5 bits (916), Expect = 1.9e-98
Identity = 218/515 (42.33%), Postives = 300/515 (58.25%), Query Frame = 0


Query: 3   RKKKFEFEDEEDDVQGTKDGGSKFINSLSSDDDEANEDLSLKIVEKALRLRSGKLVAVAG 62
           + +KF F+D ED+ +      ++  N    DDDEANEDLSLKI+EKAL  R        G
Sbjct: 6   KDEKFVFDDGEDEDREDPVAITEVDNGEEEDDDEANEDLSLKILEKALSRRD------VG 65

Query: 63  GTKGGVAGDEDGEVFSSSLECADPEVPESGSKKTVKKRKKKVKKLESEERDVVV---RDE 122
                    + G V +  +     +V +S S K +K+      KLE++    +V   +DE
Sbjct: 66  NKLDSDLSSDSGVVSTVMVNGVKSKVKKSESSKKMKR-----NKLEADHEIPIVWNDQDE 125

Query: 123 QK-----IETTGIIDQVD-TVEPNSTEPTDNNVFRKLLRGPRYFDPPDS-WGTCYNCGEE 182
           +K     ++  G  D+V+ + EP + E   N V +KLLRG RYFDPPD+ W +CY+CGE+
Sbjct: 126 EKVVEEIVKGEGEDDEVERSDEPKTEETASNLVLKKLLRGARYFDPPDAGWVSCYSCGEQ 185

Query: 183 GHSAVNCKS-AKRKKPCFVCGSLEHNARSCGKARDCYICKKVGHRAKDCPEKHKDASSSA 242
           GH++ NC +  KR+KPCF+CGSLEH A+ C K  DCYICKK GHRAKDCP+K+K+  S  
Sbjct: 186 GHTSFNCPTPTKRRKPCFICGSLEHGAKQCSKGHDCYICKKTGHRAKDCPDKYKN-GSKG 245

Query: 243 AICLKCGDPGHDMFSCRNLYPYDDLKNIQCYICKGFGHLCCVKSTADTSVDISCYKCGQT 302
           A+CL+CGD GHDM  C+  Y  +DLK++QCYICK FGHLCCV+     S  +SCY+CGQ 
Sbjct: 246 AVCLRCGDFGHDMILCKYEYSKEDLKDVQCYICKSFGHLCCVEPGNSLSWAVSCYRCGQL 305

Query: 303 GHTGLACSRLRGE-----------VSGSVPHSSCYRCGEEGHFARECTSSTKSGKGILEE 362
           GH+GLAC R   E           +  S   S CYRCGEEGHFAREC +S+      +  
Sbjct: 306 GHSGLACGRHYEESNENDSATPERLFNSREASECYRCGEEGHFARECPNSSS-----IST 365

Query: 363 ASGDASTSSCYRCGEQGHFVRECNSSNKGGKRNRELSNPKLRSQIEETNHMGSKSVSHDL 422
           + G  S + CYRC   GHF REC +S++  KR+RE S    +S+ +   +    S  H+ 
Sbjct: 366 SHGRESQTLCYRCNGSGHFARECPNSSQVSKRDRETSTTSHKSRKKNKENSEHDSTPHES 425

Query: 423 S-NTHSKKKKINHDEKYTK-SPRKSVQKGRWMMEDPDSGNFSHGKFMRNNWNSPATPSRW 482
           +  T  KKKK  H E+  + SPRK   +G W+ E+P+  +F  GK  R    SP TPS +
Sbjct: 426 NGKTKKKKKKKTHKEEQPQTSPRKRKHRGGWITEEPEEESFQRGKMRRP--KSPITPSGY 485

Query: 483 DHNYYTEYTDHYESPRFSD--HYASPRSSGRYASP 492
           + +  T    +Y SP+F+   HY   +SS  ++ P
Sbjct: 486 NRSPSTHIGHNYRSPKFNSGGHYPGSQSSRHHSGP 501

[Close]

BLAST of Sed0019248.1 vs. TAIR 10
Match: AT5G36240.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 119.0 bits (297), Expect = 1.2e-26
Identity = 64/152 (42.11%), Postives = 85/152 (55.92%), Query Frame = 0


Query: 223 KHKDASSSAAICLKCGDPGHDMFSCRNLYPYDDLKNIQCYICKGFGHLCCVKSTADTSVD 282
           +H D    A +CL+CG  GHDM  C+  Y ++DLKNI+CY+C   GHLCC++     S  
Sbjct: 19  RHND--DEAEVCLRCGGFGHDMTLCKYEYSHEDLKNIKCYVCNSLGHLCCIEPGHTQSWT 78

Query: 283 ISCYKCGQTGHTGLACSRLRGEVSGSVPHSSCYRCGEEGHFARECTSSTK---SGKGILE 342
           +SCY+CGQ GHTGLAC R       SV   SC+ CG EGHF  +C +S           +
Sbjct: 79  VSCYRCGQLGHTGLACGR---HYDDSV-SPSCFICGREGHFEHQCHNSFSVCFPEDSSED 138

Query: 343 EASGDASTSSCY----RCGEQGHFVRECNSSN 368
           E  G  S+S  +    R  E+GHF  +C  S+
Sbjct: 139 ECQGPDSSSVRFQENTREEEEGHFEHQCPDSS 164

[Close]

BLAST of Sed0019248.1 vs. TAIR 10
Match: AT2G17870.1 (cold shock domain protein 3 )

HSP 1 Score: 103.6 bits (257), Expect = 5.1e-22
Identity = 72/220 (32.73%), Postives = 95/220 (43.18%), Query Frame = 0


Query: 162 SWGTCYNCGEEGHSAVNCKSAKRKKPCFVCGSLEHNARSCGKARDCYICKKVGHRAKDCP 221
           S G C+NCGE GH A +C      K  F  G      R  G   +CY+C  VGH A+DC 
Sbjct: 92  SGGNCFNCGEVGHMAKDCDGGSGGK-SFGGG----GGRRSGGEGECYMCGDVGHFARDCR 151

Query: 222 EKHKDASSSAA----ICLKCGDPGHDMFSCR-----NLYPYDDLKNI---QCYICKGFGH 281
           +     S         C  CG+ GH    CR     N Y     +      CY+C G GH
Sbjct: 152 QSGGGNSGGGGGGGRPCYSCGEVGHLAKDCRGGSGGNRYGGGGGRGSGGDGCYMCGGVGH 211

Query: 282 LC--CVKSTADT--SVDISCYKCGQTGHTGLACSRLRGEVSGSVPHSSCYRCGEEGHFAR 341
               C ++          +CY CG  GH    C+  +    G     +CY CG  GH AR
Sbjct: 212 FARDCRQNGGGNVGGGGSTCYTCGGVGHIAKVCTS-KIPSGGGGGGRACYECGGTGHLAR 271

Query: 342 ECTSSTKSGKGILEEASGDASTSSCYRCGEQGHFVRECNS 366
           +C    + G G    + G   ++ C+ CG++GHF REC S
Sbjct: 272 DC---DRRGSG---SSGGGGGSNKCFICGKEGHFARECTS 299

[Close]

BLAST of Sed0019248.1 vs. TAIR 10
Match: AT4G36020.1 (cold shock domain protein 1 )

HSP 1 Score: 102.4 bits (254), Expect = 1.1e-21
Identity = 69/231 (29.87%), Postives = 94/231 (40.69%), Query Frame = 0


Query: 166 CYNCGEEGHSAVNC----------KSAKRKKPCFVCGSLEHNARSCGKARD--------- 225
           CYNCGE GH + +C          + ++  + C+ CG   H AR C  A +         
Sbjct: 102 CYNCGELGHISKDCGIGGGGGGGERRSRGGEGCYNCGDTGHFARDCTSAGNGDQRGATKG 161

Query: 226 ----CYICKKVGHRAKDCPEKHKDASSSAAICLKCGDPGHDMFSCRNLYPYDDLKNIQCY 285
               CY C  VGH A+DC +K           +K G+ G                   CY
Sbjct: 162 GNDGCYTCGDVGHVARDCTQKSVGNGDQRG-AVKGGNDG-------------------CY 221

Query: 286 ICKGFGHLC--CVKSTADTSV------DISCYKCGQTGHTGLACSRLRGEVSGSVPHSSC 345
            C   GH    C +  A  +V        +CY CG  GH    C+  R       P   C
Sbjct: 222 TCGDVGHFARDCTQKVAAGNVRSGGGGSGTCYSCGGVGHIARDCATKR------QPSRGC 281

Query: 346 YRCGEEGHFARECTSSTKSGKGILEEASGDASTSSCYRCGEQGHFVRECNS 366
           Y+CG  GH AR+C      G G         + ++CY+CG++GHF REC+S
Sbjct: 282 YQCGGSGHLARDCDQRGSGGGG---------NDNACYKCGKEGHFARECSS 297

[Close]

BLAST of Sed0019248.1 vs. TAIR 10
Match: AT3G43490.1 (Zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 92.4 bits (228), Expect = 1.2e-18
Identity = 69/177 (38.98%), Postives = 95/177 (53.67%), Query Frame = 0


Query: 34  DDEANEDLSLKIVEKALRLRS--GKLVAVAGGTKGGVAGDEDGEVFSSSLECADPEVPES 93
           DDEANEDL LKI+EKA   R+   KL +      G V          S++     +  E 
Sbjct: 23  DDEANEDLRLKILEKAFSRRNVDNKLDSDLSFDPGVV----------STVMVNGGKSEEV 82

Query: 94  GSKKTVKKRKKKVKKLESEERDVVVRDEQKIETTGIIDQVDTVEPNSTEPTDNNVFRKLL 153
            + K+ KK K+   KLE+   ++V    ++ +   +++ V   E    E T N+V  KLL
Sbjct: 83  KNSKSNKKMKR--NKLEA-ANEIVTHCVERQDEDNMVEDVVRGEEEDGETTSNSVMTKLL 142

Query: 154 RGPRYFDPPDS-WGTCYNCGEEGHSAVNCKSAKR-KKPCFVCGSLEHNARSCGKARD 207
           RG RYFDP D+ W TCY+CGE+ H  V+C +    +K CF+C SLEH AR C K  D
Sbjct: 143 RGARYFDPLDAGWVTCYSCGEKDHITVSCPTLTNCRKSCFICASLEHGARQCTKVWD 186

The following BLAST results are available for this feature:

BLAST of Sed0019248.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453513.1	1.9e-209	66.39	PREDICTED: zinc finger CCHC domain-containing protein 7 isoform X4 [Cucumis melo...	[more]
XP_038880631.1	6.3e-208	62.44	uncharacterized protein LOC120072267 isoform X4 [Benincasa hispida]	[more]
XP_008453512.1	8.2e-208	66.05	PREDICTED: zinc finger CCHC domain-containing protein 7 isoform X3 [Cucumis melo...	[more]
XP_038880630.1	1.4e-207	62.15	uncharacterized protein LOC120072267 isoform X3 [Benincasa hispida]	[more]
XP_038880629.1	2.4e-207	61.99	uncharacterized protein LOC120072267 isoform X2 [Benincasa hispida]	[more]

BLAST of Sed0019248.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q04832	3.3e-26	32.79	DNA-binding protein HEXBP OS=Leishmania major OX=5664 GN=HEXBP PE=4 SV=1	[more]
Q3T0Q6	1.9e-21	34.05	Cellular nucleic acid-binding protein OS=Bos taurus OX=9913 GN=CNBP PE=2 SV=1	[more]
O42395	4.2e-21	33.69	Cellular nucleic acid-binding protein OS=Gallus gallus OX=9031 GN=CNBP PE=2 SV=1	[more]
Q94C69	7.1e-21	32.73	Cold shock domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=CSP3 P...	[more]
P62633	1.2e-20	32.81	Cellular nucleic acid-binding protein OS=Homo sapiens OX=9606 GN=CNBP PE=1 SV=1	[more]

BLAST of Sed0019248.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BVV3	9.4e-210	66.39	zinc finger CCHC domain-containing protein 7 isoform X4 OS=Cucumis melo OX=3656 ...	[more]
A0A1S3BXL1	4.0e-208	66.05	zinc finger CCHC domain-containing protein 7 isoform X3 OS=Cucumis melo OX=3656 ...	[more]
A0A5A7UTU3	2.4e-205	62.92	Zinc finger CCHC domain-containing protein 7 isoform X2 OS=Cucumis melo var. mak...	[more]
A0A1S3BX80	2.4e-205	62.92	zinc finger CCHC domain-containing protein 7 isoform X2 OS=Cucumis melo OX=3656 ...	[more]
A0A5D3DYV3	5.4e-205	62.92	Zinc finger CCHC domain-containing protein 7 isoform X2 OS=Cucumis melo var. mak...	[more]

BLAST of Sed0019248.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G43590.1	1.9e-98	42.33	zinc knuckle (CCHC-type) family protein	[more]
AT5G36240.1	1.2e-26	42.11	zinc knuckle (CCHC-type) family protein	[more]
AT2G17870.1	5.1e-22	32.73	cold shock domain protein 3	[more]
AT4G36020.1	1.1e-21	29.87	cold shock domain protein 1	[more]
AT3G43490.1	1.2e-18	38.98	Zinc knuckle (CCHC-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 349..365 e-value: 0.0018 score: 27.6 coord: 206..222 e-value: 9.3E-5 score: 31.8 coord: 313..329 e-value: 8.1E-6 score: 35.3 coord: 165..181 e-value: 1.7E-4 score: 30.9 coord: 233..249 e-value: 0.12 score: 16.8 coord: 284..300 e-value: 0.22 score: 15.3 coord: 187..203 e-value: 0.23 score: 15.1
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 313..329 e-value: 9.9E-8 score: 31.7 coord: 207..222 e-value: 1.1E-5 score: 25.2 coord: 164..181 e-value: 6.8E-6 score: 25.9 coord: 349..364 e-value: 3.2E-5 score: 23.8
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 207..222 score: 9.932926
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 285..298 score: 9.092303
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 350..363 score: 10.542789
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 314..329 score: 11.086722
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 166..181 score: 10.147202
None	No IPR available	GENE3D	4.10.60.10		coord: 254..302 e-value: 5.4E-6 score: 28.2
None	No IPR available	GENE3D	4.10.60.10		coord: 205..252 e-value: 6.2E-10 score: 40.9
None	No IPR available	GENE3D	4.10.60.10		coord: 343..379 e-value: 1.3E-6 score: 29.9 coord: 306..336 e-value: 3.5E-7 score: 31.7
None	No IPR available	GENE3D	4.10.60.10		coord: 90..204 e-value: 2.0E-10 score: 42.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 477..538
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 483..523
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 386..429
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 400..429
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	PANTHER	PTHR46978	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 1..336
None	No IPR available	PANTHER	PTHR46978:SF1	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 1..336 coord: 339..535
None	No IPR available	PANTHER	PTHR46978	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 339..535
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 159..204
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 303..366
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 204..249

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0019248	Sed0019248	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0019248.1-five_prime_utr	Sed0019248.1-five_prime_utr-LG12:31939113..31939310	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0019248.1-exon	Sed0019248.1-exon-LG12:31939113..31939649	exon
Sed0019248.1-exon	Sed0019248.1-exon-LG12:31939920..31940033	exon
Sed0019248.1-exon	Sed0019248.1-exon-LG12:31940124..31940279	exon
Sed0019248.1-exon	Sed0019248.1-exon-LG12:31940626..31940787	exon
Sed0019248.1-exon	Sed0019248.1-exon-LG12:31940872..31940988	exon
Sed0019248.1-exon	Sed0019248.1-exon-LG12:31941589..31941696	exon
Sed0019248.1-exon	Sed0019248.1-exon-LG12:31941782..31941889	exon
Sed0019248.1-exon	Sed0019248.1-exon-LG12:31942016..31942630	exon
Sed0019248.1-exon	Sed0019248.1-exon-LG12:31943257..31943489	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0019248.1-cds	Sed0019248.1-cds-LG12:31939311..31939649	CDS
Sed0019248.1-cds	Sed0019248.1-cds-LG12:31939920..31940033	CDS
Sed0019248.1-cds	Sed0019248.1-cds-LG12:31940124..31940279	CDS
Sed0019248.1-cds	Sed0019248.1-cds-LG12:31940626..31940787	CDS
Sed0019248.1-cds	Sed0019248.1-cds-LG12:31940872..31940988	CDS
Sed0019248.1-cds	Sed0019248.1-cds-LG12:31941589..31941696	CDS
Sed0019248.1-cds	Sed0019248.1-cds-LG12:31941782..31941889	CDS
Sed0019248.1-cds	Sed0019248.1-cds-LG12:31942016..31942528	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0019248.1-three_prime_utr	Sed0019248.1-three_prime_utr-LG12:31942529..31942630	three_prime_UTR
Sed0019248.1-three_prime_utr	Sed0019248.1-three_prime_utr-LG12:31943257..31943489	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0019248.1	Sed0019248.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding