Sed0019036.1 (mRNA) Chayote v1

Overview


Name	Sed0019036.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	ULP_PROTEASE domain-containing protein
Location	LG11: 3037559 .. 3039905 (+)
Sequence length	1332
RNA-Seq Expression	Sed0019036.1
Synteny	Sed0019036.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCCTACAAATGTCGATGAAGAAGAAACCTCAACTAAAAAGCGAACACGAGGCACAACTACTATGAAAGAAGGAAGAAGTAAAAAGAAAGATGGGGAGAAACGATTGGTTATATTCAATGAAGATGGAGTGCCCATTGGGGATAGTGGACACAAATTTACTTCCTTCATTGGATCAACAGTTCATCATCACATCCCTATTACTTATAAGAAATGGCCTGACGTACCACGTGAGTTGAAAGAGAAGTTGTTTAATATCGTTGAGGTATGTTCACTTTCACCATAATAATAATATTAATTTATTTGTGGTTGTATTTATTAATAGTATTTATTTTTTAATGTGTAGAATGATTTTGAATTTGATGGACGAGCTAAAAAGAAGGTACTCAGAATGGGTGGGGTAGCTTTTCGTCAATTCAAGAACATTCTAACTACAAAGTGGATAATGCCATTTAAAGATCAACCTGAAATTTTAGAAAATCCACCAACTTTATACTCATTTCTTGACAAAACTCAGTGGACAGAGTTTGTCAAATCAAGGTTAACTCCAGAGTTCGAGGTATGAAAATAATTGAATTCGTGTGGGTATATATATATATTGTTTTGGTTTCTTACTAAGTACACATTAATGTAGAAATTGAGAGCCGAACAACAAGCAAAACAAGCAAGTAATAGGTATCATCATCGCCTTTCACGTAAAGGTTATGCCAACAAGAAGGAAGAAATGGTAATACTTTCTGTTTAATTTATAATAATCTAATTCCTCATAACATGTATCTAACTTATTATGTTTATTGGAGTTTAGAAGAATAAAGGATTAGATGATAGTCAGCTTCAACGACATAACATGTGGAAGATTGCACATTCTAATAAGAAAGGAGAAATTGTGGACGAACATGTTCAAGAAGTAGTTGACAAGATGGTAAATAACTTTCGTTTCTTTTTAACATGTTCATGGAGTAGTTGAAATGACAAATAACTTCTTTTTTTTAAGGATGATATCATTGCAACTGTAGACCCAACAAACCACAAGTTTCCGAATCCTAATGATGTGTTGACTAAAGCTTTAGGCACTCCTGAACACAATGGGCGTGTACGTGGAGTAGGTGGTTTCATTACACCTACTTCATACTTCCACACTCCAAAAAGTGGGCTGAAGAGAACTGCAAAGGAAATGGAACTTGCTAATGAGAATGAATTACTTCGACAACGCATTCAAGAGTTGGAAGCAAATCAAATGAACACACAAGACACTCCAAAATCTGAACAAGGGAGTTGCACCAAGCAAGTTTTGAAAATGGCTAAAAAGAATGAAGATAAAGTTGACGACAAAGTAATTATACCAATGGGGAAGCTTAGTACAAAACAATTGGAAGATATCATAAAACCTTCAACCAAGGTACAATATGCCAAATTTCTCTTAAGTGTCGTCTTTCATATATAAAAGATGCAATTTTTATTAACTAGCACTTATTTTTTGTTAAAGGGAAAATCATGCTTGTTGGCAAAAGATGTAATTTCAAATGTTGTTGCATCCGGCATACTACTTGAGGATAAGACACTAGGATCTACAATTCATGGAATACCATTAGGAGAAAATAATGTTAGAGTCTCAATAGATGTGGCGATCGTTGATGCAGCCTTACCGATCACGGTAAGAGATGATTTGAAAACTACAAAACAATCTATTGGGTCACATGTCCCATGGCCACGCAATTTAGTGATTCTCAATGAGGAGATGAAGGTACGCTCGATAAAAACAATTAATTTCTAAAAAATCTCATTAGATCTCTCATGAATCATGATAAAATTAAAACTTACTTATTGTAGGTTAAATCTAAGAAGAAGATTAAAGACAAAATCAAAGTTGGTGATTTGCAGATGTTGGATCTACCAGAAGGTTTGAATTCTATCTTTCGCCATGCAGAGTCGATAATGAAGACTGACAGTAGTATCTCCATGCAACTTCCTGAGGGGCTCTTCGGTACAAGTCGCAAGAGTTGTGTATTAAGAGACGATATTATTGACTTTTGCAATATGAAAGAAGTAAAAACATTATCGTTGGTTGCTTATATGGCGTAATAAATTTTTTCCTTCTTTTCTTTATCATATTAAATTATAGTAGACTTTTTTTTTAAAAGAAAACTAACCATTATCTTAATCTTTGTAGGTATTTGTACTCATATTGCGTTGATTCAGGGCGAGCTGAAAAGTATATTTTCGTGGATCCATCTTTAATATCGTTTGGTCAATACACACCGGAAATTAGAGCACGTAATCTTTGTTCGAGACTGATGACTGCAAGAAAAGATCAATTGGTTGTTGCTCCATATAATCTTGGGTGA

mRNA sequence

ATGAAGCCTACAAATGTCGATGAAGAAGAAACCTCAACTAAAAAGCGAACACGAGGCACAACTACTATGAAAGAAGGAAGAAGTAAAAAGAAAGATGGGGAGAAACGATTGGTTATATTCAATGAAGATGGAGTGCCCATTGGGGATAGTGGACACAAATTTACTTCCTTCATTGGATCAACAGTTCATCATCACATCCCTATTACTTATAAGAAATGGCCTGACGTACCACGTGAGTTGAAAGAGAAGTTGTTTAATATCGTTGAGGATGATATCATTGCAACTGTAGACCCAACAAACCACAAGTTTCCGAATCCTAATGATGTGTTGACTAAAGCTTTAGGCACTCCTGAACACAATGGGCGTGTACGTGGAGTAGGTGGTTTCATTACACCTACTTCATACTTCCACACTCCAAAAAGTGGGCTGAAGAGAACTGCAAAGGAAATGGAACTTGCTAATGAGAATGAATTACTTCGACAACGCATTCAAGAGTTGGAAGCAAATCAAATGAACACACAAGACACTCCAAAATCTGAACAAGGGATTGACGACAAAGTAATTATACCAATGGGGAAGCTTAGTACAAAACAATTGGAAGATATCATAAAACCTTCAACCAAGGTACAATATGCCAAATTTCTCTTAAGTGGAAAATCATGCTTGTTGGCAAAAGATGTAATTTCAAATGTTGTTGCATCCGGCATACTACTTGAGGATAAGACACTAGGATCTACAATTCATGGAATACCATTAGGAGAAAATAATGTTAGAGTCTCAATAGATGTGGCGATCGTTGATGCAGCCTTACCGATCACGGTAAGAGATGATTTGAAAACTACAAAACAATCTATTGGGTCACATGTCCCATGGCCACGCAATTTAGTGATTCTCAATGAGGAGATGAAGGTTAAATCTAAGAAGAAGATTAAAGACAAAATCAAAGTTGGTGATTTGCAGATGTTGGATCTACCAGAAGGTTTGAATTCTATCTTTCGCCATGCAGAGTCGATAATGAAGACTGACAGTAGTATCTCCATGCAACTTCCTGAGGGGCTCTTCGGTACAAGTCGCAAGAGTTGTGTATTAAGAGACGATATTATTGACTTTTGCAATATGAAAGAAGTAAAAACATTATCGTTGGTTGCTTATATGGCGTATTTGTACTCATATTGCGTTGATTCAGGGCGAGCTGAAAAGTATATTTTCGTGGATCCATCTTTAATATCGTTTGGTCAATACACACCGGAAATTAGAGCACGTAATCTTTGTTCGAGACTGATGACTGCAAGAAAAGATCAATTGGTTGTTGCTCCATATAATCTTGGGTGA

Coding sequence (CDS)

ATGAAGCCTACAAATGTCGATGAAGAAGAAACCTCAACTAAAAAGCGAACACGAGGCACAACTACTATGAAAGAAGGAAGAAGTAAAAAGAAAGATGGGGAGAAACGATTGGTTATATTCAATGAAGATGGAGTGCCCATTGGGGATAGTGGACACAAATTTACTTCCTTCATTGGATCAACAGTTCATCATCACATCCCTATTACTTATAAGAAATGGCCTGACGTACCACGTGAGTTGAAAGAGAAGTTGTTTAATATCGTTGAGGATGATATCATTGCAACTGTAGACCCAACAAACCACAAGTTTCCGAATCCTAATGATGTGTTGACTAAAGCTTTAGGCACTCCTGAACACAATGGGCGTGTACGTGGAGTAGGTGGTTTCATTACACCTACTTCATACTTCCACACTCCAAAAAGTGGGCTGAAGAGAACTGCAAAGGAAATGGAACTTGCTAATGAGAATGAATTACTTCGACAACGCATTCAAGAGTTGGAAGCAAATCAAATGAACACACAAGACACTCCAAAATCTGAACAAGGGATTGACGACAAAGTAATTATACCAATGGGGAAGCTTAGTACAAAACAATTGGAAGATATCATAAAACCTTCAACCAAGGTACAATATGCCAAATTTCTCTTAAGTGGAAAATCATGCTTGTTGGCAAAAGATGTAATTTCAAATGTTGTTGCATCCGGCATACTACTTGAGGATAAGACACTAGGATCTACAATTCATGGAATACCATTAGGAGAAAATAATGTTAGAGTCTCAATAGATGTGGCGATCGTTGATGCAGCCTTACCGATCACGGTAAGAGATGATTTGAAAACTACAAAACAATCTATTGGGTCACATGTCCCATGGCCACGCAATTTAGTGATTCTCAATGAGGAGATGAAGGTTAAATCTAAGAAGAAGATTAAAGACAAAATCAAAGTTGGTGATTTGCAGATGTTGGATCTACCAGAAGGTTTGAATTCTATCTTTCGCCATGCAGAGTCGATAATGAAGACTGACAGTAGTATCTCCATGCAACTTCCTGAGGGGCTCTTCGGTACAAGTCGCAAGAGTTGTGTATTAAGAGACGATATTATTGACTTTTGCAATATGAAAGAAGTAAAAACATTATCGTTGGTTGCTTATATGGCGTATTTGTACTCATATTGCGTTGATTCAGGGCGAGCTGAAAAGTATATTTTCGTGGATCCATCTTTAATATCGTTTGGTCAATACACACCGGAAATTAGAGCACGTAATCTTTGTTCGAGACTGATGACTGCAAGAAAAGATCAATTGGTTGTTGCTCCATATAATCTTGGGTGA

Protein sequence

MKPTNVDEEETSTKKRTRGTTTMKEGRSKKKDGEKRLVIFNEDGVPIGDSGHKFTSFIGSTVHHHIPITYKKWPDVPRELKEKLFNIVEDDIIATVDPTNHKFPNPNDVLTKALGTPEHNGRVRGVGGFITPTSYFHTPKSGLKRTAKEMELANENELLRQRIQELEANQMNTQDTPKSEQGIDDKVIIPMGKLSTKQLEDIIKPSTKVQYAKFLLSGKSCLLAKDVISNVVASGILLEDKTLGSTIHGIPLGENNVRVSIDVAIVDAALPITVRDDLKTTKQSIGSHVPWPRNLVILNEEMKVKSKKKIKDKIKVGDLQMLDLPEGLNSIFRHAESIMKTDSSISMQLPEGLFGTSRKSCVLRDDIIDFCNMKEVKTLSLVAYMAYLYSYCVDSGRAEKYIFVDPSLISFGQYTPEIRARNLCSRLMTARKDQLVVAPYNLG

Homology

[Close]

BLAST of Sed0019036.1 vs. NCBI nr
Match: TYK22869.1 (hypothetical protein E5676_scaffold334G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 247.7 bits (631), Expect = 1.9e-61
Identity = 187/569 (32.86%), Postives = 248/569 (43.59%), Query Frame = 0


Query: 14   KKRTRGTTTMKEGRSKKKDGEKRLVIFNEDGVPIGDSGHKFTSFIGSTVHHHIPITYKKW 73
            KK+TRG T M +    K  GEK +V +NE+G+PIG++GHK  SFIGS VHHHIPIT+  W
Sbjct: 941  KKKTRGLTLMHDVTRIKSTGEKTVVEYNENGIPIGENGHKLQSFIGSCVHHHIPITHASW 1000

Query: 74   PDVPRELKEKLFNIVE-------------------------------------DDIIATV 133
              VP ELKEK+ ++VE                                     D+    +
Sbjct: 1001 KVVPTELKEKICSMVEGAFVVDGRSKKAIMKTAGVSFRQFKSWLTTQYIIPFMDEPQLLI 1060

Query: 134  DPTN-------------------------------------------------------- 193
            DP +                                                        
Sbjct: 1061 DPPSLYAHIIDKPVWQEFVRSRMSSEFQKLRREQQDRRKRSKYTHNMSRRGYANLAEDMK 1120

Query: 194  ------------------------------------------HKFPN---PNDVLTKALG 253
                                                       K PN   PND LT+ALG
Sbjct: 1121 KGSFEEQDFGRANMWKKARTKKDGGYINEDVQQVANEIDEILDKAPNEESPNDALTQALG 1180

Query: 254  TPEHNGRVRGVGGFITPTSYFHTPK-SGLKRTAKEMELANENELLRQRIQELEANQMNTQ 313
            TPE+ GRVRGVGGFITPT YFH  K    K+     ++ +ENE LR+RI+ELE      Q
Sbjct: 1181 TPEYGGRVRGVGGFITPTVYFHQAKPRKSKKVDTTQQIIDENEALRKRIRELE---QKVQ 1240

Query: 314  DTPKSEQGIDDKVIIPMGKLSTKQLEDIIKPSTKVQYAKFLLSGKSCLLAKDVISNVVAS 373
              P SE G                                     SC  +K      V  
Sbjct: 1241 SIPTSEHG-------------------------------------SCSKSKVQEKEKVLE 1300

Query: 374  GILLEDKTLGSTIHGIPLGENNVRVSIDVAIVDAALPITVRDDLKTTKQSIGSHVPWPRN 433
             ++ E K + +++  + L                     V ++ +  ++ + +  P  +N
Sbjct: 1301 NVVKEKKGIATSVPPVSLTSKK----------------KVVEEEEVKEEEVIATTPMTKN 1360

Query: 434  LVILNEEMKVKSKKKIKDKIKVGDLQMLDLPEGLNSIFRHAESIMKTDSSISMQLPEGLF 444
                    +VKS + +  +++V   +  +LP  L  I R+AE +M   SS S QLP  LF
Sbjct: 1361 --------EVKSSRPMTKEVEVTS-EPSNLPIQLKYILRYAERVMVDGSSFSFQLPLELF 1420

[Close]

BLAST of Sed0019036.1 vs. NCBI nr
Match: TYK01009.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 245.7 bits (626), Expect = 7.3e-61
Identity = 186/569 (32.69%), Postives = 247/569 (43.41%), Query Frame = 0


Query: 14   KKRTRGTTTMKEGRSKKKDGEKRLVIFNEDGVPIGDSGHKFTSFIGSTVHHHIPITYKKW 73
            KK+TRG T M +    K  GEK +V +NE+G+PIG++GHK  SFIGS VHHHIPIT+  W
Sbjct: 714  KKKTRGLTLMHDVTRIKSTGEKTVVEYNENGIPIGENGHKLQSFIGSCVHHHIPITHASW 773

Query: 74   PDVPRELKEKLFNIVE-------------------------------------DDIIATV 133
              VP ELKEK+ ++VE                                     D+    +
Sbjct: 774  KVVPTELKEKICSMVEGAFVVDGRSKKAIMKTAGVSFRQFKSWLTTQYIIPFMDEPQLLI 833

Query: 134  DPTN-------------------------------------------------------- 193
            DP +                                                        
Sbjct: 834  DPPSLYAHIIDKPVWQEFVRSRMSSEFQKLRREQQDRRKRSKYTHNMSRRGYANLAEDMK 893

Query: 194  ------------------------------------------HKFPN---PNDVLTKALG 253
                                                       K PN   PND LT+ALG
Sbjct: 894  KGSFEEQDFGRANMWKKARTKKDGGYINEDVQQVANEIDEILDKAPNEESPNDALTQALG 953

Query: 254  TPEHNGRVRGVGGFITPTSYFHTPK-SGLKRTAKEMELANENELLRQRIQELEANQMNTQ 313
            TPE+ GRVRGVGGFITPT YFH  K     +     ++ +ENE LR+RI+ELE      Q
Sbjct: 954  TPEYGGRVRGVGGFITPTVYFHQAKPRKSNKVDTTQQIIDENEALRKRIRELE---QKVQ 1013

Query: 314  DTPKSEQGIDDKVIIPMGKLSTKQLEDIIKPSTKVQYAKFLLSGKSCLLAKDVISNVVAS 373
              P SE G                                     SC  +K      V  
Sbjct: 1014 SIPTSEHG-------------------------------------SCSKSKVQEKEKVLE 1073

Query: 374  GILLEDKTLGSTIHGIPLGENNVRVSIDVAIVDAALPITVRDDLKTTKQSIGSHVPWPRN 433
             ++ E K + +++  + L                     V ++ +  ++ + +  P  +N
Sbjct: 1074 NVVKEKKGIATSVPPVSLTSKK----------------KVVEEEEVKEEEVIATTPMTKN 1133

Query: 434  LVILNEEMKVKSKKKIKDKIKVGDLQMLDLPEGLNSIFRHAESIMKTDSSISMQLPEGLF 444
                    +VKS + +  +++V   +  +LP  L  I R+AE +M   SS S QLP  LF
Sbjct: 1134 --------EVKSSRPMTKEVEVTS-EPSNLPIQLKYILRYAERVMVDGSSFSFQLPLELF 1193

[Close]

BLAST of Sed0019036.1 vs. NCBI nr
Match: TYK24859.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 244.2 bits (622), Expect = 2.1e-60
Identity = 185/569 (32.51%), Postives = 247/569 (43.41%), Query Frame = 0


Query: 14   KKRTRGTTTMKEGRSKKKDGEKRLVIFNEDGVPIGDSGHKFTSFIGSTVHHHIPITYKKW 73
            KK+TRG T M +    K  GEK +V +NE+G+PIG++GHK  SFIGS VHHHIPIT+  W
Sbjct: 657  KKKTRGLTLMHDVTRIKSTGEKTVVEYNENGIPIGENGHKLQSFIGSCVHHHIPITHASW 716

Query: 74   PDVPRELKEKLFNIVE-------------------------------------DDIIATV 133
              VP ELKEK+ ++VE                                     D+    +
Sbjct: 717  KVVPTELKEKICSMVEGAFVVDGRSKKAIMKTAGVSFRQFKSWLTTQYIIPFMDEPQLLI 776

Query: 134  DPTN-------------------------------------------------------- 193
            DP +                                                        
Sbjct: 777  DPPSLYAHIIDKPVWQEFVRSRMSSEFQKLRREQQDRRKRSKYTHNMSRRGYANLAEDMK 836

Query: 194  ------------------------------------------HKFPN---PNDVLTKALG 253
                                                       K PN   PND LT+ALG
Sbjct: 837  KGSFEEQDFGRANMWKKARTKKDEGCINEDVQQVANEIDEILDKAPNEESPNDALTQALG 896

Query: 254  TPEHNGRVRGVGGFITPTSYFHTPK-SGLKRTAKEMELANENELLRQRIQELEANQMNTQ 313
            TPE+ GRVRGVGGFITPT YFH  K     +     ++ +ENE LR+RI+ELE      Q
Sbjct: 897  TPEYGGRVRGVGGFITPTVYFHQAKPRKSNKVDTTQQIIDENEALRKRIRELE---QKVQ 956

Query: 314  DTPKSEQGIDDKVIIPMGKLSTKQLEDIIKPSTKVQYAKFLLSGKSCLLAKDVISNVVAS 373
              P SE G                                     SC  +K      V  
Sbjct: 957  SIPTSEHG-------------------------------------SCSKSKVQEKEKVLE 1016

Query: 374  GILLEDKTLGSTIHGIPLGENNVRVSIDVAIVDAALPITVRDDLKTTKQSIGSHVPWPRN 433
             ++ E K + +++  + L                     V ++ +  ++ + +  P  +N
Sbjct: 1017 NVVKEKKGIATSVPPVSLTSKK----------------KVVEEEEVKEEEVIATTPMTKN 1076

Query: 434  LVILNEEMKVKSKKKIKDKIKVGDLQMLDLPEGLNSIFRHAESIMKTDSSISMQLPEGLF 444
                    +VKS + +  +++V   +  +LP  L  I R+AE +M   SS S QLP  LF
Sbjct: 1077 --------EVKSSRPMTKEVEVTS-EPSNLPIQLKYILRYAERVMVDGSSFSFQLPLELF 1136

[Close]

BLAST of Sed0019036.1 vs. NCBI nr
Match: TYK30539.1 (hypothetical protein E5676_scaffold71G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 238.0 bits (606), Expect = 1.5e-58
Identity = 167/448 (37.28%), Postives = 231/448 (51.56%), Query Frame = 0


Query: 14  KKRTRGTTTMKEGRSKKKDGEKRLVIFNEDGVPIGDSGHKFTSFIGS---TVHHHIPITY 73
           KK+TRG T M +    K  GEK +V +NE+G+PIG++GHK  SFIGS   +++ HI I  
Sbjct: 582 KKKTRGLTLMHDVTRIKSTGEKTVVEYNENGIPIGENGHKLQSFIGSYPPSLYAHI-IDK 641

Query: 74  KKWPDVPRELKEKLFNIVEDD-------IIATVDPTNHKFPN-------PNDVLTKALGT 133
             W +  R      F  +  +          T + +   + N       PND LT+ALGT
Sbjct: 642 PVWQEFVRSKMSSEFQKLRREQQDRRKRSKYTHNMSRRGYANLAEDMESPNDALTQALGT 701

Query: 134 PEHNGRVRGVGGFITPTSYFHTPK-SGLKRTAKEMELANENELLRQRIQELEANQMNTQD 193
           PE+ GRVRGVGGFITPT YF+  K     +     ++ +ENE L +RI+ELE      Q 
Sbjct: 702 PEYGGRVRGVGGFITPTVYFNQAKPRKSNKVDTTQKIIDENEALHKRIRELE---QKVQS 761

Query: 194 TPKSEQGIDDKVIIPMGKLSTKQLEDIIKPSTKVQYAKFLLSGKSCLLAKDVISNVVASG 253
              SE G                                     SC  +K      V   
Sbjct: 762 ILTSEHG-------------------------------------SCSKSKVQEKEKVLEN 821

Query: 254 ILLEDKTLGSTIHGIPLGENNVRVSIDVAIVDAALPITVRDDLKTTKQSIGSHVPWPRNL 313
           ++ E K + +++  + L                     V ++ +  ++ + +  P  +N 
Sbjct: 822 VVKEKKGIATSVPPVSLTSKK----------------KVVEEEEVKEEEVIATTPMTKN- 881

Query: 314 VILNEEMKVKSKKKIKDKIKVGDLQMLDLPEGLNSIFRHAESIMKTDSSISMQLPEGLFG 373
                  +VKS + +  +++V   +  +LP  L  I R+AE +M   SS S QLP  LFG
Sbjct: 882 -------EVKSSRPMTKEVEVTS-EPSNLPIQLKYILRYAERVMVDGSSFSFQLPLELFG 941

Query: 374 TSRKSCVLRDDIIDFCNMKEVKTLSLVAYMAYLYSYCVDSGRAEKYIFVDPSLISFGQYT 433
            SRKS VLR+D+IDFCNM++VKTLS+VAY+ YLYS  +D  +  KY+FVDPSLIS G  T
Sbjct: 942 ISRKSYVLREDVIDFCNMQKVKTLSMVAYITYLYSLIIDLKKVSKYVFVDPSLISAGHST 963

Query: 434 PEIRARNLCSRLMTARKDQLVVAPYNLG 444
            EIRARNLCSRLMT+++DQLVVAPYN G
Sbjct: 1002 REIRARNLCSRLMTSKQDQLVVAPYNPG 963

[Close]

BLAST of Sed0019036.1 vs. NCBI nr
Match: TYK22670.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 237.3 bits (604), Expect = 2.6e-58
Identity = 181/554 (32.67%), Postives = 241/554 (43.50%), Query Frame = 0


Query: 14   KKRTRGTTTMKEGRSKKKDGEKRLVIFNEDGVPIGDSGHKFTSFIGSTVHHHIPITYKKW 73
            KK+TRG T M +    K  GEK +V +NE+G+PIG++GHK  SFIGS VHHHIPIT+  W
Sbjct: 831  KKKTRGLTLMHDVTRIKSTGEKTVVEYNENGIPIGENGHKLQSFIGSCVHHHIPITHASW 890

Query: 74   P-------------------------------------DVPREL---------------- 133
                                                  D P+ L                
Sbjct: 891  KGAFVVDGRSKKAIMKTAGVSFRQFKSWLTTQYIIPFMDEPQLLIDPPSLYAHIIDKPVW 950

Query: 134  ---------------------------------KEKLFNIVED----------------- 193
                                             +    N+ ED                 
Sbjct: 951  QEFVRSRMSSEFQKLRREQQDRRKRSKYTHNMSRRGYANLAEDMKKGSFEEQDFGRANMW 1010

Query: 194  -----------------DIIATVDPTNHKFPN---PNDVLTKALGTPEHNGRVRGVGGFI 253
                              +   +D    K PN   PND LT+ALGTPE+ GRVRGVGGFI
Sbjct: 1011 KKARTKKDGGYINEDVQQVANEIDEILDKAPNEESPNDALTQALGTPEYGGRVRGVGGFI 1070

Query: 254  TPTSYFHTPK-SGLKRTAKEMELANENELLRQRIQELEANQMNTQDTPKSEQGIDDKVII 313
            TPT YFH  K     +     ++ +ENE LR+RI+ELE      Q  P SE G       
Sbjct: 1071 TPTVYFHQAKPRKSNKVDTTQQIIDENEALRKRIRELE---QKVQSIPTSEHG------- 1130

Query: 314  PMGKLSTKQLEDIIKPSTKVQYAKFLLSGKSCLLAKDVISNVVASGILLEDKTLGSTIHG 373
                                          SC  +K      V   ++ E K + +++  
Sbjct: 1131 ------------------------------SCSKSKVQEKEKVLENVVKEKKGIATSVPP 1190

Query: 374  IPLGENNVRVSIDVAIVDAALPITVRDDLKTTKQSIGSHVPWPRNLVILNEEMKVKSKKK 433
            + L                     V ++ +  ++ + +  P  +N        +VKS + 
Sbjct: 1191 VSLTSKK----------------KVVEEEEVKEEEVIATTPMTKN--------EVKSSRP 1250

Query: 434  IKDKIKVGDLQMLDLPEGLNSIFRHAESIMKTDSSISMQLPEGLFGTSRKSCVLRDDIID 444
            +  +++V   +  +LP  L  I R+AE +M   SS S QLP  LFG SRKS VLR+D+ID
Sbjct: 1251 MTKEVEVTS-EPSNLPIQLKYILRYAERVMVDGSSFSFQLPLELFGISRKSYVLREDVID 1310

[Close]

BLAST of Sed0019036.1 vs. ExPASy TrEMBL
Match: A0A5D3DHZ4 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold334G00040 PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 9.3e-62
Identity = 187/569 (32.86%), Postives = 248/569 (43.59%), Query Frame = 0


Query: 14   KKRTRGTTTMKEGRSKKKDGEKRLVIFNEDGVPIGDSGHKFTSFIGSTVHHHIPITYKKW 73
            KK+TRG T M +    K  GEK +V +NE+G+PIG++GHK  SFIGS VHHHIPIT+  W
Sbjct: 941  KKKTRGLTLMHDVTRIKSTGEKTVVEYNENGIPIGENGHKLQSFIGSCVHHHIPITHASW 1000

Query: 74   PDVPRELKEKLFNIVE-------------------------------------DDIIATV 133
              VP ELKEK+ ++VE                                     D+    +
Sbjct: 1001 KVVPTELKEKICSMVEGAFVVDGRSKKAIMKTAGVSFRQFKSWLTTQYIIPFMDEPQLLI 1060

Query: 134  DPTN-------------------------------------------------------- 193
            DP +                                                        
Sbjct: 1061 DPPSLYAHIIDKPVWQEFVRSRMSSEFQKLRREQQDRRKRSKYTHNMSRRGYANLAEDMK 1120

Query: 194  ------------------------------------------HKFPN---PNDVLTKALG 253
                                                       K PN   PND LT+ALG
Sbjct: 1121 KGSFEEQDFGRANMWKKARTKKDGGYINEDVQQVANEIDEILDKAPNEESPNDALTQALG 1180

Query: 254  TPEHNGRVRGVGGFITPTSYFHTPK-SGLKRTAKEMELANENELLRQRIQELEANQMNTQ 313
            TPE+ GRVRGVGGFITPT YFH  K    K+     ++ +ENE LR+RI+ELE      Q
Sbjct: 1181 TPEYGGRVRGVGGFITPTVYFHQAKPRKSKKVDTTQQIIDENEALRKRIRELE---QKVQ 1240

Query: 314  DTPKSEQGIDDKVIIPMGKLSTKQLEDIIKPSTKVQYAKFLLSGKSCLLAKDVISNVVAS 373
              P SE G                                     SC  +K      V  
Sbjct: 1241 SIPTSEHG-------------------------------------SCSKSKVQEKEKVLE 1300

Query: 374  GILLEDKTLGSTIHGIPLGENNVRVSIDVAIVDAALPITVRDDLKTTKQSIGSHVPWPRN 433
             ++ E K + +++  + L                     V ++ +  ++ + +  P  +N
Sbjct: 1301 NVVKEKKGIATSVPPVSLTSKK----------------KVVEEEEVKEEEVIATTPMTKN 1360

Query: 434  LVILNEEMKVKSKKKIKDKIKVGDLQMLDLPEGLNSIFRHAESIMKTDSSISMQLPEGLF 444
                    +VKS + +  +++V   +  +LP  L  I R+AE +M   SS S QLP  LF
Sbjct: 1361 --------EVKSSRPMTKEVEVTS-EPSNLPIQLKYILRYAERVMVDGSSFSFQLPLELF 1420

[Close]

BLAST of Sed0019036.1 vs. ExPASy TrEMBL
Match: A0A5D3BSE4 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G00030 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 3.5e-61
Identity = 186/569 (32.69%), Postives = 247/569 (43.41%), Query Frame = 0


Query: 14   KKRTRGTTTMKEGRSKKKDGEKRLVIFNEDGVPIGDSGHKFTSFIGSTVHHHIPITYKKW 73
            KK+TRG T M +    K  GEK +V +NE+G+PIG++GHK  SFIGS VHHHIPIT+  W
Sbjct: 714  KKKTRGLTLMHDVTRIKSTGEKTVVEYNENGIPIGENGHKLQSFIGSCVHHHIPITHASW 773

Query: 74   PDVPRELKEKLFNIVE-------------------------------------DDIIATV 133
              VP ELKEK+ ++VE                                     D+    +
Sbjct: 774  KVVPTELKEKICSMVEGAFVVDGRSKKAIMKTAGVSFRQFKSWLTTQYIIPFMDEPQLLI 833

Query: 134  DPTN-------------------------------------------------------- 193
            DP +                                                        
Sbjct: 834  DPPSLYAHIIDKPVWQEFVRSRMSSEFQKLRREQQDRRKRSKYTHNMSRRGYANLAEDMK 893

Query: 194  ------------------------------------------HKFPN---PNDVLTKALG 253
                                                       K PN   PND LT+ALG
Sbjct: 894  KGSFEEQDFGRANMWKKARTKKDGGYINEDVQQVANEIDEILDKAPNEESPNDALTQALG 953

Query: 254  TPEHNGRVRGVGGFITPTSYFHTPK-SGLKRTAKEMELANENELLRQRIQELEANQMNTQ 313
            TPE+ GRVRGVGGFITPT YFH  K     +     ++ +ENE LR+RI+ELE      Q
Sbjct: 954  TPEYGGRVRGVGGFITPTVYFHQAKPRKSNKVDTTQQIIDENEALRKRIRELE---QKVQ 1013

Query: 314  DTPKSEQGIDDKVIIPMGKLSTKQLEDIIKPSTKVQYAKFLLSGKSCLLAKDVISNVVAS 373
              P SE G                                     SC  +K      V  
Sbjct: 1014 SIPTSEHG-------------------------------------SCSKSKVQEKEKVLE 1073

Query: 374  GILLEDKTLGSTIHGIPLGENNVRVSIDVAIVDAALPITVRDDLKTTKQSIGSHVPWPRN 433
             ++ E K + +++  + L                     V ++ +  ++ + +  P  +N
Sbjct: 1074 NVVKEKKGIATSVPPVSLTSKK----------------KVVEEEEVKEEEVIATTPMTKN 1133

Query: 434  LVILNEEMKVKSKKKIKDKIKVGDLQMLDLPEGLNSIFRHAESIMKTDSSISMQLPEGLF 444
                    +VKS + +  +++V   +  +LP  L  I R+AE +M   SS S QLP  LF
Sbjct: 1134 --------EVKSSRPMTKEVEVTS-EPSNLPIQLKYILRYAERVMVDGSSFSFQLPLELF 1193

[Close]

BLAST of Sed0019036.1 vs. ExPASy TrEMBL
Match: A0A5D3DNH1 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G001280 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.0e-60
Identity = 185/569 (32.51%), Postives = 247/569 (43.41%), Query Frame = 0


Query: 14   KKRTRGTTTMKEGRSKKKDGEKRLVIFNEDGVPIGDSGHKFTSFIGSTVHHHIPITYKKW 73
            KK+TRG T M +    K  GEK +V +NE+G+PIG++GHK  SFIGS VHHHIPIT+  W
Sbjct: 657  KKKTRGLTLMHDVTRIKSTGEKTVVEYNENGIPIGENGHKLQSFIGSCVHHHIPITHASW 716

Query: 74   PDVPRELKEKLFNIVE-------------------------------------DDIIATV 133
              VP ELKEK+ ++VE                                     D+    +
Sbjct: 717  KVVPTELKEKICSMVEGAFVVDGRSKKAIMKTAGVSFRQFKSWLTTQYIIPFMDEPQLLI 776

Query: 134  DPTN-------------------------------------------------------- 193
            DP +                                                        
Sbjct: 777  DPPSLYAHIIDKPVWQEFVRSRMSSEFQKLRREQQDRRKRSKYTHNMSRRGYANLAEDMK 836

Query: 194  ------------------------------------------HKFPN---PNDVLTKALG 253
                                                       K PN   PND LT+ALG
Sbjct: 837  KGSFEEQDFGRANMWKKARTKKDEGCINEDVQQVANEIDEILDKAPNEESPNDALTQALG 896

Query: 254  TPEHNGRVRGVGGFITPTSYFHTPK-SGLKRTAKEMELANENELLRQRIQELEANQMNTQ 313
            TPE+ GRVRGVGGFITPT YFH  K     +     ++ +ENE LR+RI+ELE      Q
Sbjct: 897  TPEYGGRVRGVGGFITPTVYFHQAKPRKSNKVDTTQQIIDENEALRKRIRELE---QKVQ 956

Query: 314  DTPKSEQGIDDKVIIPMGKLSTKQLEDIIKPSTKVQYAKFLLSGKSCLLAKDVISNVVAS 373
              P SE G                                     SC  +K      V  
Sbjct: 957  SIPTSEHG-------------------------------------SCSKSKVQEKEKVLE 1016

Query: 374  GILLEDKTLGSTIHGIPLGENNVRVSIDVAIVDAALPITVRDDLKTTKQSIGSHVPWPRN 433
             ++ E K + +++  + L                     V ++ +  ++ + +  P  +N
Sbjct: 1017 NVVKEKKGIATSVPPVSLTSKK----------------KVVEEEEVKEEEVIATTPMTKN 1076

Query: 434  LVILNEEMKVKSKKKIKDKIKVGDLQMLDLPEGLNSIFRHAESIMKTDSSISMQLPEGLF 444
                    +VKS + +  +++V   +  +LP  L  I R+AE +M   SS S QLP  LF
Sbjct: 1077 --------EVKSSRPMTKEVEVTS-EPSNLPIQLKYILRYAERVMVDGSSFSFQLPLELF 1136

[Close]

BLAST of Sed0019036.1 vs. ExPASy TrEMBL
Match: A0A5D3E405 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold71G00030 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 7.3e-59
Identity = 167/448 (37.28%), Postives = 231/448 (51.56%), Query Frame = 0


Query: 14  KKRTRGTTTMKEGRSKKKDGEKRLVIFNEDGVPIGDSGHKFTSFIGS---TVHHHIPITY 73
           KK+TRG T M +    K  GEK +V +NE+G+PIG++GHK  SFIGS   +++ HI I  
Sbjct: 582 KKKTRGLTLMHDVTRIKSTGEKTVVEYNENGIPIGENGHKLQSFIGSYPPSLYAHI-IDK 641

Query: 74  KKWPDVPRELKEKLFNIVEDD-------IIATVDPTNHKFPN-------PNDVLTKALGT 133
             W +  R      F  +  +          T + +   + N       PND LT+ALGT
Sbjct: 642 PVWQEFVRSKMSSEFQKLRREQQDRRKRSKYTHNMSRRGYANLAEDMESPNDALTQALGT 701

Query: 134 PEHNGRVRGVGGFITPTSYFHTPK-SGLKRTAKEMELANENELLRQRIQELEANQMNTQD 193
           PE+ GRVRGVGGFITPT YF+  K     +     ++ +ENE L +RI+ELE      Q 
Sbjct: 702 PEYGGRVRGVGGFITPTVYFNQAKPRKSNKVDTTQKIIDENEALHKRIRELE---QKVQS 761

Query: 194 TPKSEQGIDDKVIIPMGKLSTKQLEDIIKPSTKVQYAKFLLSGKSCLLAKDVISNVVASG 253
              SE G                                     SC  +K      V   
Sbjct: 762 ILTSEHG-------------------------------------SCSKSKVQEKEKVLEN 821

Query: 254 ILLEDKTLGSTIHGIPLGENNVRVSIDVAIVDAALPITVRDDLKTTKQSIGSHVPWPRNL 313
           ++ E K + +++  + L                     V ++ +  ++ + +  P  +N 
Sbjct: 822 VVKEKKGIATSVPPVSLTSKK----------------KVVEEEEVKEEEVIATTPMTKN- 881

Query: 314 VILNEEMKVKSKKKIKDKIKVGDLQMLDLPEGLNSIFRHAESIMKTDSSISMQLPEGLFG 373
                  +VKS + +  +++V   +  +LP  L  I R+AE +M   SS S QLP  LFG
Sbjct: 882 -------EVKSSRPMTKEVEVTS-EPSNLPIQLKYILRYAERVMVDGSSFSFQLPLELFG 941

Query: 374 TSRKSCVLRDDIIDFCNMKEVKTLSLVAYMAYLYSYCVDSGRAEKYIFVDPSLISFGQYT 433
            SRKS VLR+D+IDFCNM++VKTLS+VAY+ YLYS  +D  +  KY+FVDPSLIS G  T
Sbjct: 942 ISRKSYVLREDVIDFCNMQKVKTLSMVAYITYLYSLIIDLKKVSKYVFVDPSLISAGHST 963

Query: 434 PEIRARNLCSRLMTARKDQLVVAPYNLG 444
            EIRARNLCSRLMT+++DQLVVAPYN G
Sbjct: 1002 REIRARNLCSRLMTSKQDQLVVAPYNPG 963

[Close]

BLAST of Sed0019036.1 vs. ExPASy TrEMBL
Match: A0A5D3DH49 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G001150 PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.3e-58
Identity = 181/554 (32.67%), Postives = 241/554 (43.50%), Query Frame = 0


Query: 14   KKRTRGTTTMKEGRSKKKDGEKRLVIFNEDGVPIGDSGHKFTSFIGSTVHHHIPITYKKW 73
            KK+TRG T M +    K  GEK +V +NE+G+PIG++GHK  SFIGS VHHHIPIT+  W
Sbjct: 831  KKKTRGLTLMHDVTRIKSTGEKTVVEYNENGIPIGENGHKLQSFIGSCVHHHIPITHASW 890

Query: 74   P-------------------------------------DVPREL---------------- 133
                                                  D P+ L                
Sbjct: 891  KGAFVVDGRSKKAIMKTAGVSFRQFKSWLTTQYIIPFMDEPQLLIDPPSLYAHIIDKPVW 950

Query: 134  ---------------------------------KEKLFNIVED----------------- 193
                                             +    N+ ED                 
Sbjct: 951  QEFVRSRMSSEFQKLRREQQDRRKRSKYTHNMSRRGYANLAEDMKKGSFEEQDFGRANMW 1010

Query: 194  -----------------DIIATVDPTNHKFPN---PNDVLTKALGTPEHNGRVRGVGGFI 253
                              +   +D    K PN   PND LT+ALGTPE+ GRVRGVGGFI
Sbjct: 1011 KKARTKKDGGYINEDVQQVANEIDEILDKAPNEESPNDALTQALGTPEYGGRVRGVGGFI 1070

Query: 254  TPTSYFHTPK-SGLKRTAKEMELANENELLRQRIQELEANQMNTQDTPKSEQGIDDKVII 313
            TPT YFH  K     +     ++ +ENE LR+RI+ELE      Q  P SE G       
Sbjct: 1071 TPTVYFHQAKPRKSNKVDTTQQIIDENEALRKRIRELE---QKVQSIPTSEHG------- 1130

Query: 314  PMGKLSTKQLEDIIKPSTKVQYAKFLLSGKSCLLAKDVISNVVASGILLEDKTLGSTIHG 373
                                          SC  +K      V   ++ E K + +++  
Sbjct: 1131 ------------------------------SCSKSKVQEKEKVLENVVKEKKGIATSVPP 1190

Query: 374  IPLGENNVRVSIDVAIVDAALPITVRDDLKTTKQSIGSHVPWPRNLVILNEEMKVKSKKK 433
            + L                     V ++ +  ++ + +  P  +N        +VKS + 
Sbjct: 1191 VSLTSKK----------------KVVEEEEVKEEEVIATTPMTKN--------EVKSSRP 1250

Query: 434  IKDKIKVGDLQMLDLPEGLNSIFRHAESIMKTDSSISMQLPEGLFGTSRKSCVLRDDIID 444
            +  +++V   +  +LP  L  I R+AE +M   SS S QLP  LFG SRKS VLR+D+ID
Sbjct: 1251 MTKEVEVTS-EPSNLPIQLKYILRYAERVMVDGSSFSFQLPLELFGISRKSYVLREDVID 1310

The following BLAST results are available for this feature:

BLAST of Sed0019036.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK22869.1	1.9e-61	32.86	hypothetical protein E5676_scaffold334G00040 [Cucumis melo var. makuwa]	[more]
TYK01009.1	7.3e-61	32.69	transposase [Cucumis melo var. makuwa]	[more]
TYK24859.1	2.1e-60	32.51	transposase [Cucumis melo var. makuwa]	[more]
TYK30539.1	1.5e-58	37.28	hypothetical protein E5676_scaffold71G00030 [Cucumis melo var. makuwa]	[more]
TYK22670.1	2.6e-58	32.67	transposase [Cucumis melo var. makuwa]	[more]

BLAST of Sed0019036.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0019036.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DHZ4	9.3e-62	32.86	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5D3BSE4	3.5e-61	32.69	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G00030 PE...	[more]
A0A5D3DNH1	1.0e-60	32.51	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G001280 P...	[more]
A0A5D3E405	7.3e-59	37.28	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5D3DH49	1.3e-58	32.67	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G001150 P...	[more]

BLAST of Sed0019036.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 149..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	PANTHER	PTHR33018:SF19	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 8..86 coord: 102..305
None	No IPR available	PANTHER	PTHR33018	OS10G0338966 PROTEIN-RELATED	coord: 8..86
None	No IPR available	PANTHER	PTHR33018	OS10G0338966 PROTEIN-RELATED	coord: 102..305

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0019036	Sed0019036	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0019036.1-exon	Sed0019036.1-exon-LG11:3037559..3037825	exon
Sed0019036.1-exon	Sed0019036.1-exon-LG11:3038555..3038834	exon
Sed0019036.1-exon	Sed0019036.1-exon-LG11:3038883..3038986	exon
Sed0019036.1-exon	Sed0019036.1-exon-LG11:3039047..3039304	exon
Sed0019036.1-exon	Sed0019036.1-exon-LG11:3039391..3039638	exon
Sed0019036.1-exon	Sed0019036.1-exon-LG11:3039731..3039905	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0019036.1-cds	Sed0019036.1-cds-LG11:3037559..3037825	CDS
Sed0019036.1-cds	Sed0019036.1-cds-LG11:3038555..3038834	CDS
Sed0019036.1-cds	Sed0019036.1-cds-LG11:3038883..3038986	CDS
Sed0019036.1-cds	Sed0019036.1-cds-LG11:3039047..3039304	CDS
Sed0019036.1-cds	Sed0019036.1-cds-LG11:3039391..3039638	CDS
Sed0019036.1-cds	Sed0019036.1-cds-LG11:3039731..3039905	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0019036.1	Sed0019036.1-protein	polypeptide