Sed0018874.1 (mRNA) Chayote v1

Overview


Name	Sed0018874.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Integral membrane HPP family protein
Location	LG01: 13508863 .. 13513108 (-)
Sequence length	2311
RNA-Seq Expression	Sed0018874.1
Synteny	Sed0018874.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGTACCTATATCTATTCCTAGAGTAGGCACCGGGAAACATTGAAGAAATGGAGATACGGGAGTTGTCTACACGTTAATGTCATAGTGGGTCTTGAACCTATGACCTTGAGGAGGTATACATTCAAAACTCAAGTCTTCACCAATGCGCCACTCCTTAGAGATAATTGGAAGGGCGGCTTAGGGTAAATAGTGAAAGGGGGAGAATGACAAATGATTATGAAATAATTGTTGGTGATTTAAACATGAGTGAGGGATCTAATGATCATTCTCATTCTTCTTGACTCAAACACCTTTAAGACAAGAAGAATGAGAATTATTACGGAGAGGATCTTAGAAAATAATGATTTTGAAGAGAATGAATATTGTTTTGGGAATGAAGTGATTGATTATTAGGGAAGTGTACAGGGTAAAAAGTTATTACAAGTACGAATAAAAAAATGTTAGGAAGAAATGAGATTGTGAACTGATTGATTCTTGGGGGTGGAATGATCCTCTTTTCCATTATCCTCATTTGACTTATTTTCCATATTTAGACTTTGCTGTGACAATTAAATGATGGGCTTTTCTTAGCTGCTCTCTTCAATAAAAGTCAAAACTGTAACAGAGGATCACTTCAAATGGCAACTGAAATTTAATCCCATTTCACTGATTCGATGCTGATGAGTTTTTAAGTATATCTCGAAATAGACAAGCACGATGGCAGAGAGGGTGCTATTATTTATTGAATTTTCCACTATTATTATTATTATTATTATTTATGATTTAGCTTTTGAGTTTTTAATGTTCGAGAAGTGGCAACTATACAGAAATGGAGTTGTCTCTTTCTGTGAATGGCCTTTGGAGCTCTTCAAAGGCCAACTCTGCAACACAGCTTCGAGTTTTTTTTTCTTCTTTTTCTTCAGGCCTCTGTTTTCAAGCAGAAACTTTTCCCAAATCCCATTTCCTTACAAGATGGTGTCTTTGTCAGATTCACGTCTGAATTTACAATTGCATGCTATTAATTTATTCACTATTTTCTGTTTCTTATCTTTTTTATTTATCACAAACTCTTTTTGCGGCTTTTCCCATACGCTCTCTCTGTTTCTCTGTATCTTTTTCTTCTTCTTCTTCTTCTTCCCCTGTTTTGTCCACAAATATCTTAAGATAGAACAATAGAAGCTTTGAGGTGGGTTGAAGGTAAAATCCAGTATGAGCCTGCAACTAAAGCCAACTAGCCACCATCTCCATCACCGTAGCCGCCGCCATTGCCTTCATCGGCAGCAGTATCGACCCAGTTCTAATGTACGATTACGATCTCCGTCCGCTTCTCTGCTCCCGAATCATTCATTTGTTTCTTTGTTGCCGAATTGCCATTCATTGAATGCAAAACGAGGGATTTCGGCGGACGGGTCTAGTTCGTGGAGATTATTCGGTGACCGGAGAAGACGAAGCAGCAGCAGAATCAGTCACCGGAGTATCGTGGCATCCGGCATTGCTGGTGTGCCGATTTCAGATGGGTCAAAACCAGAAAAGGGCTTTATTTCTCCTCCTCTCAGTGACATCCTTTGGCCTTCTGCAGGTTAGTAGAAAAAAAGAAAAAAAAAACCCACTAGAACTGAAATTTGATGAGAAATTGCAATGAAACAGGGGCATTTGCAGCAATGGCAATGCTGGGGAAAATGGATCAAATCCTAGCACCCAAGGGGCTTTCTATGACAATTGCGCCACTAGGAGCCGTGTGTGCGGTCCTGTTCGCAACGCCGTCGGCCCCTGCAGCTCGAGTACTCCCCCTGTTTCTCCAATTCAACGAATTCTCGATATCTTTCCCGGAATCGGGTTCGATTAATTTGTTTGTTTTCTCAAGCAGAAGTACAATATCTTCATAGCACAGATTGGTTGTGCGGCAATCGGGGTATTGGCGTTTACTTTGCTGGGGCCGGGATGGCTGGCAAGAAGCTCTGCTCTGGCTGCATCCATGGCGTTTATGATCTACACTGGTTCAACTCATCCTCCAGGTTGAAATCAACAACAACCCACTGAATTTCAAAAGCTCCATTGTTGTTTGTTTAACTGTGTTGTGTGTATTGATTGGAATTTGTTAATTGTAGCTGCGAGCTTGCCGATTCTGTTCATCGATGGAGCTAAATTGCATCATCTCAATTTCTGGTATGCTCTGTTTCCAGGAGCCGCTGGATGTATTCTTCTATGTTTGATAGTAAGTTCTTTTCTCTGTTTTTTTTTCTTTTTTTCTTTTTCTCAGTCATTAGATACTTCCTAAGATCCTTGGAATCTTTTTAGATACTCAATTTTATACCGTAACAAAATTGAGATGTTAAGAAATATTGTTTTTTTTTTATAATAAAAAATAAATAAAGTTAATTTGTTAATTTATTATTGAAATAATGCTTCACTGACACGAGATATGCTACAATTGAATACAATATGAAGCTCAACACCTACCTATTAATAAAATTCAACCCACAATCAACAAATTTTTTTTATCCATGTGGTCCATATAATAAAATTAATTATATCTTAATTCTGCTTGCTTAGCGAAATGGGTTATTAAAATAAAGGGTGAAACCATCATTCAGAGTTAGTCCCAACACCAGCCTGATTAGTTTAGTGGTCAAAATGACAAAAAAATAATAATAATAAAAGATCGTAGATTCAAACATTAAAAGGTTAGACAGTTTGTTTAATAATAATAATGGAGGTATGTACAAGTTGATTCAAATACGGATGGATAGGTATAAAAAAATTAATAATAAATAAATAAATTACTAGTAAAATTATTAAAATATGGTTACTTAAGTTGAATTATGCACTTCAGTTCTTTAAAAATTAGTAGGCTAAATCATCCAAATTAATAAAATGGAAACGATAGAATAAGACAATCCTAATTCTCAGCTCAAAGATCCAAGCTTAGAATAAAGCAAGAACCCTTGAATTAAGAGATTAACACCTATGGATTTGGGAACAACCAAGAGAAAAAGCTAATTACCTCTTAAGATATCAATGATCTAGAAGCATGATATGGAAGATCTTGTTCTAGATTGAGCCACTCCACAATCAAGCTAGATCAAGGTTGGATTGAATGGCTCGGATACATTCTATCACAAGAATTGCAAGGGGAACTTCGAAAAAAGGCAAAAAACATGTCCTAAAATTCTAAGAAAAGGATCTCTAAAACTAGTTTTCATTCATTCAAAATCTGAGTTTTACAACTTAGTTCATGACTATTAAGAAAATTAAACCTAAAAAGAAGAAATAACATAATTACCATAATGGCCCTTTGCAAAAATTTAACCTAAAAACATATAAATGAAAATTTTAAACCTAAAATTACATGTAAATAGCCATAAATCTGAAAATTGATGGTTTTGAAACCATTCTTGATGATTTTGTAACCATCCATAAGTAAATGAAGATCATTTCTAAGTAACTTGAAGGTAAAATGTTGGGTCATATTCTGATTCATATCATTAGTTAGAAAGAGATTAAATTATAAAAATAAAATACTTATGAACTTTTTTTTCCTTGTTTTAAAAGGGTTCCTGATCTTGTGAAAAGTTGCAATATTACGTTTAACTTTTTTTTTTTTTAATATTTCAAAACTATCTCTGAAGTAGAAAATATATCAGAATATTGAATAAAAAGTTAATGTGTTTGAATAGTGTATCTTTATACCAATCAGCAATGAAGATGTTGGATTTTCCTTTCTTGTAATCAAACCTACAACAGGTTTGCATATTTAATAACTATCCTCTTAAATTGAATACACACAACTTTGCCTCCAACTTTGGTAATACTACATTTACAAATAAAAATATGGGTGCTTCATCAATTTATACTTTCCTTTGCTAAGCTTACAAATTGCATCATATGTTGTTTTGATTGCAGCAAGAGATAGTGGTGTACTTGAAGGAGAAGTTCAAATTTTAAGCTCTCAATGAAACAGTGTGACACATTGAACCACCCATTATTTGAAAGCCAAATATTGATGAAAATAATTCATTGTCATTCCCCAACAAATATTTTTTGTCCCATAATTGTTCTTGTTCAACCCCCACATCACTCCCAATTGCCTCTTCATTCTCAAATTAAGTTGTAAATTTATCTTCCCTACTTTGTGCATTTGATCTTTGTGAATCTTCATCTATATATGAATGGTTAAATTATAAGTTTAGTTCTTCATCTTTCATGAATTTTAGAGAGATACCTAATAAATTCTTACTTTGATCTTGTGTTCAGTAAATTCTTGAA

mRNA sequence

AGGTACCTATATCTATTCCTAGAGTAGGCACCGGGAAACATTGAAGAAATGGAGATACGGGAGTTGTCTACACGTTAATGTCATAGTGGGTCTTGAACCTATGACCTTGAGGAGGTATACATTCAAAACTCAAGTCTTCACCAATGCGCCACTCCTTAGAGATAATTGGAAGGGCGGCTTAGGGTAAATAGTGAAAGGGGGAGAATGACAAATGATTATGAAATAATTGTTGGTGATTTAAACATGAGTGAGGGATCTAATGATCATTCTCATTCTTCTTGACTCAAACACCTTTAAGACAAGAAGAATGAGAATTATTACGGAGAGGATCTTAGAAAATAATGATTTTGAAGAGAATGAATATTGTTTTGGGAATGAAGTGATTGATTATTAGGGAAGTGTACAGGGTAAAAAGTTATTACAAGTACGAATAAAAAAATGTTAGGAAGAAATGAGATTGTGAACTGATTGATTCTTGGGGGTGGAATGATCCTCTTTTCCATTATCCTCATTTGACTTATTTTCCATATTTAGACTTTGCTGTGACAATTAAATGATGGGCTTTTCTTAGCTGCTCTCTTCAATAAAAGTCAAAACTGTAACAGAGGATCACTTCAAATGGCAACTGAAATTTAATCCCATTTCACTGATTCGATGCTGATGAGTTTTTAAGTATATCTCGAAATAGACAAGCACGATGGCAGAGAGGGTGCTATTATTTATTGAATTTTCCACTATTATTATTATTATTATTATTTATGATTTAGCTTTTGAGTTTTTAATGTTCGAGAAGTGGCAACTATACAGAAATGGAGTTGTCTCTTTCTGTGAATGGCCTTTGGAGCTCTTCAAAGGCCAACTCTGCAACACAGCTTCGAGTTTTTTTTTCTTCTTTTTCTTCAGGCCTCTGTTTTCAAGCAGAAACTTTTCCCAAATCCCATTTCCTTACAAGATGGTGTCTTTGTCAGATTCACGTCTGAATTTACAATTGCATGCTATTAATTTATTCACTATTTTCTGTTTCTTATCTTTTTTATTTATCACAAACTCTTTTTGCGGCTTTTCCCATACGCTCTCTCTGTTTCTCTGTATCTTTTTCTTCTTCTTCTTCTTCTTCCCCTGTTTTGTCCACAAATATCTTAAGATAGAACAATAGAAGCTTTGAGGTGGGTTGAAGGTAAAATCCAGTATGAGCCTGCAACTAAAGCCAACTAGCCACCATCTCCATCACCGTAGCCGCCGCCATTGCCTTCATCGGCAGCAGTATCGACCCAGTTCTAATGTACGATTACGATCTCCGTCCGCTTCTCTGCTCCCGAATCATTCATTTGTTTCTTTGTTGCCGAATTGCCATTCATTGAATGCAAAACGAGGGATTTCGGCGGACGGGTCTAGTTCGTGGAGATTATTCGGTGACCGGAGAAGACGAAGCAGCAGCAGAATCAGTCACCGGAGTATCGTGGCATCCGGCATTGCTGGTGTGCCGATTTCAGATGGGTCAAAACCAGAAAAGGGCTTTATTTCTCCTCCTCTCAGTGACATCCTTTGGCCTTCTGCAGGGGCATTTGCAGCAATGGCAATGCTGGGGAAAATGGATCAAATCCTAGCACCCAAGGGGCTTTCTATGACAATTGCGCCACTAGGAGCCGTGTGTGCGGTCCTGTTCGCAACGCCGTCGGCCCCTGCAGCTCGAAAGTACAATATCTTCATAGCACAGATTGGTTGTGCGGCAATCGGGGTATTGGCGTTTACTTTGCTGGGGCCGGGATGGCTGGCAAGAAGCTCTGCTCTGGCTGCATCCATGGCGTTTATGATCTACACTGGTTCAACTCATCCTCCAGCTGCGAGCTTGCCGATTCTGTTCATCGATGGAGCTAAATTGCATCATCTCAATTTCTGGTATGCTCTGTTTCCAGGAGCCGCTGGATGTATTCTTCTATGTTTGATACAAGAGATAGTGGTGTACTTGAAGGAGAAGTTCAAATTTTAAGCTCTCAATGAAACAGTGTGACACATTGAACCACCCATTATTTGAAAGCCAAATATTGATGAAAATAATTCATTGTCATTCCCCAACAAATATTTTTTGTCCCATAATTGTTCTTGTTCAACCCCCACATCACTCCCAATTGCCTCTTCATTCTCAAATTAAGTTGTAAATTTATCTTCCCTACTTTGTGCATTTGATCTTTGTGAATCTTCATCTATATATGAATGGTTAAATTATAAGTTTAGTTCTTCATCTTTCATGAATTTTAGAGAGATACCTAATAAATTCTTACTTTGATCTTGTGTTCAGTAAATTCTTGAA

Coding sequence (CDS)

ATGAGCCTGCAACTAAAGCCAACTAGCCACCATCTCCATCACCGTAGCCGCCGCCATTGCCTTCATCGGCAGCAGTATCGACCCAGTTCTAATGTACGATTACGATCTCCGTCCGCTTCTCTGCTCCCGAATCATTCATTTGTTTCTTTGTTGCCGAATTGCCATTCATTGAATGCAAAACGAGGGATTTCGGCGGACGGGTCTAGTTCGTGGAGATTATTCGGTGACCGGAGAAGACGAAGCAGCAGCAGAATCAGTCACCGGAGTATCGTGGCATCCGGCATTGCTGGTGTGCCGATTTCAGATGGGTCAAAACCAGAAAAGGGCTTTATTTCTCCTCCTCTCAGTGACATCCTTTGGCCTTCTGCAGGGGCATTTGCAGCAATGGCAATGCTGGGGAAAATGGATCAAATCCTAGCACCCAAGGGGCTTTCTATGACAATTGCGCCACTAGGAGCCGTGTGTGCGGTCCTGTTCGCAACGCCGTCGGCCCCTGCAGCTCGAAAGTACAATATCTTCATAGCACAGATTGGTTGTGCGGCAATCGGGGTATTGGCGTTTACTTTGCTGGGGCCGGGATGGCTGGCAAGAAGCTCTGCTCTGGCTGCATCCATGGCGTTTATGATCTACACTGGTTCAACTCATCCTCCAGCTGCGAGCTTGCCGATTCTGTTCATCGATGGAGCTAAATTGCATCATCTCAATTTCTGGTATGCTCTGTTTCCAGGAGCCGCTGGATGTATTCTTCTATGTTTGATACAAGAGATAGTGGTGTACTTGAAGGAGAAGTTCAAATTTTAA

Protein sequence

MSLQLKPTSHHLHHRSRRHCLHRQQYRPSSNVRLRSPSASLLPNHSFVSLLPNCHSLNAKRGISADGSSSWRLFGDRRRRSSSRISHRSIVASGIAGVPISDGSKPEKGFISPPLSDILWPSAGAFAAMAMLGKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIFIAQIGCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAKLHHLNFWYALFPGAAGCILLCLIQEIVVYLKEKFKF

Homology

[Close]

BLAST of Sed0018874.1 vs. NCBI nr
Match: XP_038894638.1 (uncharacterized protein LOC120083135 [Benincasa hispida])

HSP 1 Score: 418.7 bits (1075), Expect = 3.8e-113
Identity = 217/269 (80.67%), Postives = 234/269 (86.99%), Query Frame = 0


Query: 1   MSLQLKPTSHHLHHRSRRHCLHRQQYRPSSNVRLRSPSASLLPNHSFVSLLPNCHSLNAK 60
           MSLQLKP  HHLHH  RRHC  ++ Y+PS  V++++PSASL  NHSFVSLLPNCH LN  
Sbjct: 1   MSLQLKPIHHHLHHHGRRHCHSQEPYQPSYRVQIQAPSASLHLNHSFVSLLPNCHLLNGN 60

Query: 61  RGISADGSSSWRLFGDRRRR---SSSRISHRSIVASGIAGVPISDGSKPEKGFISPPLSD 120
           RG+S        LF +RR+R      RI HR IVASGIAG PISDGSK EKGF+SPPLSD
Sbjct: 61  RGVSLG------LFNNRRKRRCGGGGRIGHRGIVASGIAGTPISDGSKSEKGFVSPPLSD 120

Query: 121 ILWPSAGAFAAMAMLGKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIFIAQI 180
           ILWPSAGAFAAMAMLGKMDQILAPKGLSMTIAPLGAVCAVLFATPS+PAARKYN+FIAQI
Sbjct: 121 ILWPSAGAFAAMAMLGKMDQILAPKGLSMTIAPLGAVCAVLFATPSSPAARKYNVFIAQI 180

Query: 181 GCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAKLHHLNFW 240
           GCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAK+  LNFW
Sbjct: 181 GCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAKMQQLNFW 240

Query: 241 YALFPGAAGCILLCLIQEIVVYLKEKFKF 267
           YALFPGAAGCILLCLIQE+V++LKEKFKF
Sbjct: 241 YALFPGAAGCILLCLIQELVMFLKEKFKF 263

[Close]

BLAST of Sed0018874.1 vs. NCBI nr
Match: XP_011651222.2 (uncharacterized protein LOC105434855 [Cucumis sativus] >KGN64262.2 hypothetical protein Csa_014225 [Cucumis sativus])

HSP 1 Score: 410.2 bits (1053), Expect = 1.3e-110
Identity = 214/266 (80.45%), Postives = 229/266 (86.09%), Query Frame = 0


Query: 1   MSLQLKPTSHHLHHRSRRHCLHRQQYRPSSNVRLRSPSASLLPNHSFVSLLPNCHSLNAK 60
           MSLQLKP  HHLHH   RHC + + Y+PS    ++ PS  +L NHSFVSLLP+CH LN K
Sbjct: 1   MSLQLKPIHHHLHHYGGRHCHNNEPYQPSYIENIQVPSGCML-NHSFVSLLPSCHLLNGK 60

Query: 61  RGISADGSSSWRLFGDRRRRSSSRISHRSIVASGIAGVPISDGSKPEKGFISPPLSDILW 120
           RGISA     +  +  RR R S RI HRSIVAS IAG P+SDGSKPEKGF+SPPLSDILW
Sbjct: 61  RGISARSLGLFNDWRRRRNRGSDRIGHRSIVASSIAGTPVSDGSKPEKGFVSPPLSDILW 120

Query: 121 PSAGAFAAMAMLGKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIFIAQIGCA 180
           PSAGAFAAMA+LGKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIF+AQIGCA
Sbjct: 121 PSAGAFAAMALLGKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIFLAQIGCA 180

Query: 181 AIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAKLHHLNFWYAL 240
           AIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAK+  LNFWYAL
Sbjct: 181 AIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAKMQQLNFWYAL 240

Query: 241 FPGAAGCILLCLIQEIVVYLKEKFKF 267
           FPGAAGCILLCLIQE+VV LKEK KF
Sbjct: 241 FPGAAGCILLCLIQELVVLLKEKIKF 265

[Close]

BLAST of Sed0018874.1 vs. NCBI nr
Match: XP_008437643.1 (PREDICTED: uncharacterized protein LOC103482985 [Cucumis melo])

HSP 1 Score: 400.6 bits (1028), Expect = 1.1e-107
Identity = 211/266 (79.32%), Postives = 226/266 (84.96%), Query Frame = 0


Query: 1   MSLQLKPTSHHLHHRSRRHCLHRQQYRPSSNVRLRSPSASLLPNHSFVSLLPNCHSLNAK 60
           MSLQLKP  HHLHH   RHC   + Y+PS   ++++PSA +L NHS VSLLP CH LN K
Sbjct: 1   MSLQLKPIHHHLHHHGGRHC--HKPYQPSYREKIQAPSACML-NHSLVSLLPICHLLNGK 60

Query: 61  RGISADGSSSWRLFGDRRRRSSSRISHRSIVASGIAGVPISDGSKPEKGFISPPLSDILW 120
           RGI       +  +  RR R S  I HRSIVAS IAG P+SDGSKPEKGF+SPPLSDILW
Sbjct: 61  RGIPVRSLGLFNDWRRRRSRGSDGIGHRSIVASSIAGTPVSDGSKPEKGFVSPPLSDILW 120

Query: 121 PSAGAFAAMAMLGKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIFIAQIGCA 180
           PSAGAFAAMA+LGKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIF+AQIGCA
Sbjct: 121 PSAGAFAAMALLGKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIFMAQIGCA 180

Query: 181 AIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAKLHHLNFWYAL 240
           AIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAK+  LNFWYAL
Sbjct: 181 AIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAKMQQLNFWYAL 240

Query: 241 FPGAAGCILLCLIQEIVVYLKEKFKF 267
           FPGAAGCILLCLIQE+VV LKEK KF
Sbjct: 241 FPGAAGCILLCLIQELVVLLKEKIKF 263

[Close]

BLAST of Sed0018874.1 vs. NCBI nr
Match: XP_022137446.1 (uncharacterized protein LOC111008888 [Momordica charantia])

HSP 1 Score: 397.9 bits (1021), Expect = 6.9e-107
Identity = 217/267 (81.27%), Postives = 225/267 (84.27%), Query Frame = 0


Query: 1   MSLQLKPTSHHLHHRSRRHCLHRQQY-RPSSNVRLRSPSASLLPNHSFVSLLPNCHSLNA 60
           MSLQLKP  HHL HR RRH  H+QQY + SSNVRL++ SAS  PN SFVSLLPN H  N 
Sbjct: 1   MSLQLKPIHHHLRHRGRRHSHHQQQYDQASSNVRLQASSASPPPNQSFVSLLPNFHLWNV 60

Query: 61  KRGISADGSSSWRLFGDRRRRSSSRISHRSIVASGIAGVPISDGSKPEKGFISPPLSDIL 120
            RG+        RLFGDRRRRS     HR I ASGI G  +SDG+KPEKG  SP LSDIL
Sbjct: 61  NRGM--------RLFGDRRRRS----GHRKIAASGIVGTAVSDGAKPEKGSASPSLSDIL 120

Query: 121 WPSAGAFAAMAMLGKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIFIAQIGC 180
           WPSAGAFAAMAMLGKMDQILA KGLSMTIAPLGAVCAVLFATPSAPAARKYNIF+AQIGC
Sbjct: 121 WPSAGAFAAMAMLGKMDQILAQKGLSMTIAPLGAVCAVLFATPSAPAARKYNIFMAQIGC 180

Query: 181 AAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAKLHHLNFWYA 240
           AAIGV AFTLLGPGWLARSSALAASMAFMI TGSTHPPAASLPILFIDGAKL HLNFWYA
Sbjct: 181 AAIGVAAFTLLGPGWLARSSALAASMAFMICTGSTHPPAASLPILFIDGAKLQHLNFWYA 240

Query: 241 LFPGAAGCILLCLIQEIVVYLKEKFKF 267
           LFPGAAGCILLCLIQEIVVYLKEKFKF
Sbjct: 241 LFPGAAGCILLCLIQEIVVYLKEKFKF 255

[Close]

BLAST of Sed0018874.1 vs. NCBI nr
Match: XP_023519271.1 (uncharacterized protein LOC111782708 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 385.2 bits (988), Expect = 4.6e-103
Identity = 207/272 (76.10%), Postives = 224/272 (82.35%), Query Frame = 0


Query: 1   MSLQLKPTSHHLHHRSRRHCLHRQQYRPSSNVRLRSPSASLLPNHSFVSLLPNCHSLNAK 60
           MSLQLKP    +HHR       +Q Y+PS  V           NHSF+SLLPNCH LN K
Sbjct: 1   MSLQLKP----IHHRG------QQPYQPSFRV-----------NHSFISLLPNCHLLNGK 60

Query: 61  RGISADGS--SSWRLFGDRRRR----SSSRISHRSIVASGIAGVPISDGSKPEKGFISPP 120
           RG+S DGS      L  DRRRR        +S+RSIVASGIAG PISDGSKP+KGF+SPP
Sbjct: 61  RGVSIDGSVRPLGLLLNDRRRRRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPP 120

Query: 121 LSDILWPSAGAFAAMAMLGKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIFI 180
           LSDILWPSAGAFAAMAMLGKMDQILAPKGLSMTIAPLGAVCA+LFA PS+PAARKYN+F+
Sbjct: 121 LSDILWPSAGAFAAMAMLGKMDQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFM 180

Query: 181 AQIGCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAKLHHL 240
           AQIGCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLP++FIDGAK+ HL
Sbjct: 181 AQIGCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHL 240

Query: 241 NFWYALFPGAAGCILLCLIQEIVVYLKEKFKF 267
           NFWYALFPGAAGC+LLC IQEIVVYLKEKFKF
Sbjct: 241 NFWYALFPGAAGCVLLCFIQEIVVYLKEKFKF 251

[Close]

BLAST of Sed0018874.1 vs. ExPASy TrEMBL
Match: A0A0A0LR37 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045560 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 9.4e-110
Identity = 213/266 (80.08%), Postives = 228/266 (85.71%), Query Frame = 0


Query: 1   MSLQLKPTSHHLHHRSRRHCLHRQQYRPSSNVRLRSPSASLLPNHSFVSLLPNCHSLNAK 60
           MSLQLKP  HHLHH   R C + + Y+PS    ++ PS  +L NHSFVSLLP+CH LN K
Sbjct: 1   MSLQLKPIHHHLHHYGGRPCHNNEPYQPSYIENIQVPSGCML-NHSFVSLLPSCHLLNGK 60

Query: 61  RGISADGSSSWRLFGDRRRRSSSRISHRSIVASGIAGVPISDGSKPEKGFISPPLSDILW 120
           RGISA     +  +  RR R S RI HRSIVAS IAG P+SDGSKPEKGF+SPPLSDILW
Sbjct: 61  RGISARSLGLFNDWRRRRNRGSDRIGHRSIVASSIAGTPVSDGSKPEKGFVSPPLSDILW 120

Query: 121 PSAGAFAAMAMLGKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIFIAQIGCA 180
           PSAGAFAAMA+LGKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIF+AQIGCA
Sbjct: 121 PSAGAFAAMALLGKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIFLAQIGCA 180

Query: 181 AIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAKLHHLNFWYAL 240
           AIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAK+  LNFWYAL
Sbjct: 181 AIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAKMQQLNFWYAL 240

Query: 241 FPGAAGCILLCLIQEIVVYLKEKFKF 267
           FPGAAGCILLCLIQE+VV LKEK KF
Sbjct: 241 FPGAAGCILLCLIQELVVLLKEKIKF 265

[Close]

BLAST of Sed0018874.1 vs. ExPASy TrEMBL
Match: A0A1S3AUM8 (uncharacterized protein LOC103482985 OS=Cucumis melo OX=3656 GN=LOC103482985 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 5.1e-108
Identity = 211/266 (79.32%), Postives = 226/266 (84.96%), Query Frame = 0


Query: 1   MSLQLKPTSHHLHHRSRRHCLHRQQYRPSSNVRLRSPSASLLPNHSFVSLLPNCHSLNAK 60
           MSLQLKP  HHLHH   RHC   + Y+PS   ++++PSA +L NHS VSLLP CH LN K
Sbjct: 1   MSLQLKPIHHHLHHHGGRHC--HKPYQPSYREKIQAPSACML-NHSLVSLLPICHLLNGK 60

Query: 61  RGISADGSSSWRLFGDRRRRSSSRISHRSIVASGIAGVPISDGSKPEKGFISPPLSDILW 120
           RGI       +  +  RR R S  I HRSIVAS IAG P+SDGSKPEKGF+SPPLSDILW
Sbjct: 61  RGIPVRSLGLFNDWRRRRSRGSDGIGHRSIVASSIAGTPVSDGSKPEKGFVSPPLSDILW 120

Query: 121 PSAGAFAAMAMLGKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIFIAQIGCA 180
           PSAGAFAAMA+LGKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIF+AQIGCA
Sbjct: 121 PSAGAFAAMALLGKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIFMAQIGCA 180

Query: 181 AIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAKLHHLNFWYAL 240
           AIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAK+  LNFWYAL
Sbjct: 181 AIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAKMQQLNFWYAL 240

Query: 241 FPGAAGCILLCLIQEIVVYLKEKFKF 267
           FPGAAGCILLCLIQE+VV LKEK KF
Sbjct: 241 FPGAAGCILLCLIQELVVLLKEKIKF 263

[Close]

BLAST of Sed0018874.1 vs. ExPASy TrEMBL
Match: A0A6J1C6M6 (uncharacterized protein LOC111008888 OS=Momordica charantia OX=3673 GN=LOC111008888 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 3.3e-107
Identity = 217/267 (81.27%), Postives = 225/267 (84.27%), Query Frame = 0


Query: 1   MSLQLKPTSHHLHHRSRRHCLHRQQY-RPSSNVRLRSPSASLLPNHSFVSLLPNCHSLNA 60
           MSLQLKP  HHL HR RRH  H+QQY + SSNVRL++ SAS  PN SFVSLLPN H  N 
Sbjct: 1   MSLQLKPIHHHLRHRGRRHSHHQQQYDQASSNVRLQASSASPPPNQSFVSLLPNFHLWNV 60

Query: 61  KRGISADGSSSWRLFGDRRRRSSSRISHRSIVASGIAGVPISDGSKPEKGFISPPLSDIL 120
            RG+        RLFGDRRRRS     HR I ASGI G  +SDG+KPEKG  SP LSDIL
Sbjct: 61  NRGM--------RLFGDRRRRS----GHRKIAASGIVGTAVSDGAKPEKGSASPSLSDIL 120

Query: 121 WPSAGAFAAMAMLGKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIFIAQIGC 180
           WPSAGAFAAMAMLGKMDQILA KGLSMTIAPLGAVCAVLFATPSAPAARKYNIF+AQIGC
Sbjct: 121 WPSAGAFAAMAMLGKMDQILAQKGLSMTIAPLGAVCAVLFATPSAPAARKYNIFMAQIGC 180

Query: 181 AAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAKLHHLNFWYA 240
           AAIGV AFTLLGPGWLARSSALAASMAFMI TGSTHPPAASLPILFIDGAKL HLNFWYA
Sbjct: 181 AAIGVAAFTLLGPGWLARSSALAASMAFMICTGSTHPPAASLPILFIDGAKLQHLNFWYA 240

Query: 241 LFPGAAGCILLCLIQEIVVYLKEKFKF 267
           LFPGAAGCILLCLIQEIVVYLKEKFKF
Sbjct: 241 LFPGAAGCILLCLIQEIVVYLKEKFKF 255

[Close]

BLAST of Sed0018874.1 vs. ExPASy TrEMBL
Match: A0A6J1E7R0 (uncharacterized protein LOC111431576 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431576 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.2e-101
Identity = 205/272 (75.37%), Postives = 221/272 (81.25%), Query Frame = 0


Query: 1   MSLQLKPTSHHLHHRSRRHCLHRQQYRPSSNVRLRSPSASLLPNHSFVSLLPNCHSLNAK 60
           MSLQLKP    +HHR       +Q Y+PS  V           NHSF+SLLPNCH LN K
Sbjct: 1   MSLQLKP----IHHRG------QQPYQPSFRV-----------NHSFISLLPNCHLLNGK 60

Query: 61  RGISADGS--SSWRLFGDRRRR----SSSRISHRSIVASGIAGVPISDGSKPEKGFISPP 120
           RG+S DGS      L  DRRRR          +RSIVASGIA  PISDGSKP+KGF+SPP
Sbjct: 61  RGVSIDGSVRPLGLLLNDRRRRRNGGGGGGFGYRSIVASGIARAPISDGSKPDKGFVSPP 120

Query: 121 LSDILWPSAGAFAAMAMLGKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIFI 180
           LSDILWPSAGAFAAMAMLGKMDQILAPKGLSMTIAPLGAVCA+LFA PS+PAARKYN+F+
Sbjct: 121 LSDILWPSAGAFAAMAMLGKMDQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFM 180

Query: 181 AQIGCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAKLHHL 240
           AQIGCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLP++FIDGAK+ HL
Sbjct: 181 AQIGCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHL 240

Query: 241 NFWYALFPGAAGCILLCLIQEIVVYLKEKFKF 267
           NFWYALFPGAAGC+LLC IQEIVVYLKEKFKF
Sbjct: 241 NFWYALFPGAAGCLLLCFIQEIVVYLKEKFKF 251

[Close]

BLAST of Sed0018874.1 vs. ExPASy TrEMBL
Match: A0A6J1KLD7 (uncharacterized protein LOC111495629 OS=Cucurbita maxima OX=3661 GN=LOC111495629 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 2.1e-101
Identity = 204/273 (74.73%), Postives = 221/273 (80.95%), Query Frame = 0


Query: 1   MSLQLKPTSHHLHHRSRRHCLHRQQYRPSSNVRLRSPSASLLPNHSFVSLLPNCHSLNAK 60
           M+LQLKP    +HHR       +Q Y+PS  V           NHSF+SLLPNCH LN  
Sbjct: 1   MNLQLKP----IHHRG------QQPYQPSFRV-----------NHSFISLLPNCHLLNGN 60

Query: 61  RGISADGS--SSWRLFGDRRRR-----SSSRISHRSIVASGIAGVPISDGSKPEKGFISP 120
           RG S DGS      L  DRRRR         I +RSIVASGIAG PISDGSKP+KGF+SP
Sbjct: 61  RGFSIDGSVRPLGLLLNDRRRRRNGGGGGDGIGYRSIVASGIAGAPISDGSKPDKGFVSP 120

Query: 121 PLSDILWPSAGAFAAMAMLGKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIF 180
           PLSDILWPSAGAFAAMAMLGKMDQ+LAPKGLSMTIAPLGAVCA+LFA PS+PAARKYN+F
Sbjct: 121 PLSDILWPSAGAFAAMAMLGKMDQMLAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMF 180

Query: 181 IAQIGCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAKLHH 240
           +AQIGCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLP++FIDGAK+ H
Sbjct: 181 MAQIGCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQH 240

Query: 241 LNFWYALFPGAAGCILLCLIQEIVVYLKEKFKF 267
           LNFWYALFPGAAGC+LLC IQEIVVYLKEKFKF
Sbjct: 241 LNFWYALFPGAAGCVLLCFIQEIVVYLKEKFKF 252

[Close]

BLAST of Sed0018874.1 vs. TAIR 10
Match: AT5G62720.1 (Integral membrane HPP family protein )

HSP 1 Score: 251.5 bits (641), Expect = 7.4e-67
Identity = 125/194 (64.43%), Postives = 158/194 (81.44%), Query Frame = 0


Query: 80  RSSSRISHRSIVASGIAG-----VPISDGSKPEKGFISPP--LSDILWPSAGAFAAMAML 139
           ++ + ++HR  V++ +A       P  D  KP+K   +    LSD++WP+AGAFAAMA+L
Sbjct: 50  KTPATVNHRRRVSTVVASAGNLTAPSWDSWKPDKTAAATALLLSDVIWPAAGAFAAMALL 109

Query: 140 GKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIFIAQIGCAAIGVLAFTLLGP 199
           G+MDQ+L+PKG+SM++APLGAV A+LF TPSAPAARKYNIF+AQIGCAAIGV+AF++ GP
Sbjct: 110 GRMDQMLSPKGISMSVAPLGAVSAILFITPSAPAARKYNIFLAQIGCAAIGVVAFSVFGP 169

Query: 200 GWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAKLHHLNFWYALFPGAAGCILLCL 259
           GWLARS ALAAS+AFM+ T + HPPAASLP++FIDGAK HHLNFWYALFPGAA C++LCL
Sbjct: 170 GWLARSVALAASIAFMVITRANHPPAASLPLMFIDGAKFHHLNFWYALFPGAAACVILCL 229

Query: 260 IQEIVVYLKEKFKF 267
           +Q IV YLKE  KF
Sbjct: 230 LQSIVCYLKENMKF 243

[Close]

BLAST of Sed0018874.1 vs. TAIR 10
Match: AT3G47980.1 (Integral membrane HPP family protein )

HSP 1 Score: 249.2 bits (635), Expect = 3.7e-66
Identity = 137/243 (56.38%), Postives = 172/243 (70.78%), Query Frame = 0


Query: 28  PSSNVRLRSPSASLLPNHSFVSLLPNCHSLNAKRGISADGS----SSWRLFGDRRRRSSS 87
           PS +++L S +  + P+   V    +     +  G+  D S     S R   +RRR S S
Sbjct: 10  PSGHLQLHSRNLIIPPSMVTVGFKRHHFLGVSSYGLCIDESVRHMRSLRSSSNRRRVSKS 69

Query: 88  RISHRSIVASGIAGVPISDGSKPEKGFISPPLSDILWPSAGAFAAMAMLGKMDQILAPKG 147
                 + +S        +  KPEK  ++P LSD++WP+AGAFAAMA++G++DQ+L PKG
Sbjct: 70  AGVSMPVASSDDFPAVSWESWKPEKTTVAPSLSDVIWPAAGAFAAMAIMGRIDQMLNPKG 129

Query: 148 LSMTIAPLGAVCAVLFATPSAPAARKYNIFIAQIGCAAIGVLAFTLLGPGWLARSSALAA 207
           +SM++APLGAV A+LF TPSAPAARKYN+F AQIGCAAIGVLAF+  GP WLARS+ALAA
Sbjct: 130 ISMSVAPLGAVSAILFTTPSAPAARKYNMFTAQIGCAAIGVLAFSAFGPSWLARSTALAA 189

Query: 208 SMAFMIYTGSTHPPAASLPILFIDGAKLHHLNFWYALFPGAAGCILLCLIQEIVVYLKEK 267
           S+AFM+ T + HPPAASLP+LFIDGAKLH LNFWYALFPGAA CILLC +Q IV YLKE 
Sbjct: 190 SIAFMVITRANHPPAASLPLLFIDGAKLHKLNFWYALFPGAAACILLCFLQAIVGYLKEN 249

[Close]

BLAST of Sed0018874.1 vs. TAIR 10
Match: AT5G62720.2 (Integral membrane HPP family protein )

HSP 1 Score: 167.5 bits (423), Expect = 1.4e-41
Identity = 88/149 (59.06%), Postives = 116/149 (77.85%), Query Frame = 0


Query: 80  RSSSRISHRSIVASGIAG-----VPISDGSKPEKGFISPP--LSDILWPSAGAFAAMAML 139
           ++ + ++HR  V++ +A       P  D  KP+K   +    LSD++WP+AGAFAAMA+L
Sbjct: 50  KTPATVNHRRRVSTVVASAGNLTAPSWDSWKPDKTAAATALLLSDVIWPAAGAFAAMALL 109

Query: 140 GKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIFIAQIGCAAIGVLAFTLLGP 199
           G+MDQ+L+PKG+SM++APLGAV A+LF TPSAPAARKYNIF+AQIGCAAIGV+AF++ GP
Sbjct: 110 GRMDQMLSPKGISMSVAPLGAVSAILFITPSAPAARKYNIFLAQIGCAAIGVVAFSVFGP 169

Query: 200 GWLARSSALAASMAFMIYTGSTHPPAASL 222
           GWLARS ALAAS+AFM+ T + HPP   L
Sbjct: 170 GWLARSVALAASIAFMVITRANHPPGKYL 198

The following BLAST results are available for this feature:

BLAST of Sed0018874.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894638.1	3.8e-113	80.67	uncharacterized protein LOC120083135 [Benincasa hispida]	[more]
XP_011651222.2	1.3e-110	80.45	uncharacterized protein LOC105434855 [Cucumis sativus] >KGN64262.2 hypothetical ...	[more]
XP_008437643.1	1.1e-107	79.32	PREDICTED: uncharacterized protein LOC103482985 [Cucumis melo]	[more]
XP_022137446.1	6.9e-107	81.27	uncharacterized protein LOC111008888 [Momordica charantia]	[more]
XP_023519271.1	4.6e-103	76.10	uncharacterized protein LOC111782708 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0018874.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0018874.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LR37	9.4e-110	80.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045560 PE=4 SV=1	[more]
A0A1S3AUM8	5.1e-108	79.32	uncharacterized protein LOC103482985 OS=Cucumis melo OX=3656 GN=LOC103482985 PE=...	[more]
A0A6J1C6M6	3.3e-107	81.27	uncharacterized protein LOC111008888 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A6J1E7R0	1.2e-101	75.37	uncharacterized protein LOC111431576 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KLD7	2.1e-101	74.73	uncharacterized protein LOC111495629 OS=Cucurbita maxima OX=3661 GN=LOC111495629...	[more]

BLAST of Sed0018874.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62720.1	7.4e-67	64.43	Integral membrane HPP family protein	[more]
AT3G47980.1	3.7e-66	56.38	Integral membrane HPP family protein	[more]
AT5G62720.2	1.4e-41	59.06	Integral membrane HPP family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007065	HPP	PFAM	PF04982	HPP	coord: 148..257 e-value: 1.0E-21 score: 77.3
None	No IPR available	PANTHER	PTHR33741	TRANSMEMBRANE PROTEIN DDB_G0269096-RELATED	coord: 76..266
None	No IPR available	PANTHER	PTHR33741:SF3	BNAA06G16970D PROTEIN	coord: 76..266

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0018874	Sed0018874	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0018874.1-exon	Sed0018874.1-exon-LG01:13508863..13509225	exon
Sed0018874.1-exon	Sed0018874.1-exon-LG01:13510914..13511020	exon
Sed0018874.1-exon	Sed0018874.1-exon-LG01:13511114..13511261	exon
Sed0018874.1-exon	Sed0018874.1-exon-LG01:13511348..13511481	exon
Sed0018874.1-exon	Sed0018874.1-exon-LG01:13511550..13513108	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0018874.1-three_prime_utr	Sed0018874.1-three_prime_utr-LG01:13508863..13509183	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0018874.1-cds	Sed0018874.1-cds-LG01:13509184..13509225	CDS
Sed0018874.1-cds	Sed0018874.1-cds-LG01:13510914..13511020	CDS
Sed0018874.1-cds	Sed0018874.1-cds-LG01:13511114..13511261	CDS
Sed0018874.1-cds	Sed0018874.1-cds-LG01:13511348..13511481	CDS
Sed0018874.1-cds	Sed0018874.1-cds-LG01:13511550..13511919	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0018874.1-five_prime_utr	Sed0018874.1-five_prime_utr-LG01:13511920..13513108	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0018874.1	Sed0018874.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane