Sed0018564.1 (mRNA) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCCGCTCCTACCGTCACCACCCCTGCTGGCAATCCGTCTTCGACCATACCTGTTCTGGCGATCGGCAACACGGAAACCTTCGTCAGCCCACCCTTAAATCAGCTTCTTACTCAAATCACGACCATAAAAATGGATCAGGAAAATTTTCTCCTCTGGCAAAATCTTGCCCTACCCATCCTTCGGAGCTATCGGTTGTTTGACTACCTTACCGGAGACAAACCCTGCCCGACCAAATTTCTTCCCTCATCATTCTCTCTGGAAAATTCGAGCTCTATTCCAGCCTCGCCTCCACTGGTTGTTAACCCAGAATACAAATTTTGGGTGGTTATGGATCAATTACTGCTTGGATGGTTGTATAACTCCATGATAGTTGAAGTGGCGACTCAGGTGATGGGATATCATACCTCTGCTGATCTTTGGCAAGCTGTTCAACGGTTATTTGGGGTTCAATCAAAAGCTGAAACAGCTTATTTGTAG ATGTCTTCCGCTCCTACCGTCACCACCCCTGCTGGCAATCCGTCTTCGACCATACCTGTTCTGGCGATCGGCAACACGGAAACCTTCGTCAGCCCACCCTTAAATCAGCTTCTTACTCAAATCACGACCATAAAAATGGATCAGGAAAATTTTCTCCTCTGGCAAAATCTTGCCCTACCCATCCTTCGGAGCTATCGGTTGTTTGACTACCTTACCGGAGACAAACCCTGCCCGACCAAATTTCTTCCCTCATCATTCTCTCTGGAAAATTCGAGCTCTATTCCAGCCTCGCCTCCACTGGTTGTTAACCCAGAATACAAATTTTGGGTGGTTATGGATCAATTACTGCTTGGATGGTTGTATAACTCCATGATAGTTGAAGTGGCGACTCAGGTGATGGGATATCATACCTCTGCTGATCTTTGGCAAGCTGTTCAACGGTTATTTGGGGTTCAATCAAAAGCTGAAACAGCTTATTTGTAG ATGTCTTCCGCTCCTACCGTCACCACCCCTGCTGGCAATCCGTCTTCGACCATACCTGTTCTGGCGATCGGCAACACGGAAACCTTCGTCAGCCCACCCTTAAATCAGCTTCTTACTCAAATCACGACCATAAAAATGGATCAGGAAAATTTTCTCCTCTGGCAAAATCTTGCCCTACCCATCCTTCGGAGCTATCGGTTGTTTGACTACCTTACCGGAGACAAACCCTGCCCGACCAAATTTCTTCCCTCATCATTCTCTCTGGAAAATTCGAGCTCTATTCCAGCCTCGCCTCCACTGGTTGTTAACCCAGAATACAAATTTTGGGTGGTTATGGATCAATTACTGCTTGGATGGTTGTATAACTCCATGATAGTTGAAGTGGCGACTCAGGTGATGGGATATCATACCTCTGCTGATCTTTGGCAAGCTGTTCAACGGTTATTTGGGGTTCAATCAAAAGCTGAAACAGCTTATTTGTAG MSSAPTVTTPAGNPSSTIPVLAIGNTETFVSPPLNQLLTQITTIKMDQENFLLWQNLALPILRSYRLFDYLTGDKPCPTKFLPSSFSLENSSSIPASPPLVVNPEYKFWVVMDQLLLGWLYNSMIVEVATQVMGYHTSADLWQAVQRLFGVQSKAETAYL Homology
BLAST of Sed0018564.1 vs. NCBI nr
Match: XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia]) HSP 1 Score: 178.7 bits (452), Expect = 3.9e-41 Identity = 93/150 (62.00%), Postives = 114/150 (76.00%), Query Frame = 0
BLAST of Sed0018564.1 vs. NCBI nr
Match: XP_031745012.1 (uncharacterized protein LOC116405217 [Cucumis sativus]) HSP 1 Score: 140.2 bits (352), Expect = 1.6e-29 Identity = 68/136 (50.00%), Postives = 95/136 (69.85%), Query Frame = 0
BLAST of Sed0018564.1 vs. NCBI nr
Match: XP_016902203.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]) HSP 1 Score: 137.9 bits (346), Expect = 7.7e-29 Identity = 70/142 (49.30%), Postives = 97/142 (68.31%), Query Frame = 0
BLAST of Sed0018564.1 vs. NCBI nr
Match: XP_016902205.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo]) HSP 1 Score: 137.9 bits (346), Expect = 7.7e-29 Identity = 70/142 (49.30%), Postives = 97/142 (68.31%), Query Frame = 0
BLAST of Sed0018564.1 vs. NCBI nr
Match: XP_016902197.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]) HSP 1 Score: 137.9 bits (346), Expect = 7.7e-29 Identity = 70/142 (49.30%), Postives = 97/142 (68.31%), Query Frame = 0
BLAST of Sed0018564.1 vs. ExPASy TrEMBL
Match: A0A6J1DCW4 (uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019598 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 1.9e-41 Identity = 93/150 (62.00%), Postives = 114/150 (76.00%), Query Frame = 0
BLAST of Sed0018564.1 vs. ExPASy TrEMBL
Match: A0A1S4E1U9 (uncharacterized protein LOC107991581 isoform X4 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 3.7e-29 Identity = 70/142 (49.30%), Postives = 97/142 (68.31%), Query Frame = 0
BLAST of Sed0018564.1 vs. ExPASy TrEMBL
Match: A0A1S4E1U6 (uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 3.7e-29 Identity = 70/142 (49.30%), Postives = 97/142 (68.31%), Query Frame = 0
BLAST of Sed0018564.1 vs. ExPASy TrEMBL
Match: A0A1S4E1V2 (uncharacterized protein LOC107991581 isoform X3 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 3.7e-29 Identity = 70/142 (49.30%), Postives = 97/142 (68.31%), Query Frame = 0
BLAST of Sed0018564.1 vs. ExPASy TrEMBL
Match: A0A1S4E2K3 (uncharacterized protein LOC107991581 isoform X5 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 3.7e-29 Identity = 70/142 (49.30%), Postives = 97/142 (68.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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