Sed0018313.1 (mRNA) Chayote v1

Overview


Name	Sed0018313.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	F-box/kelch-repeat protein SKIP30-like
Location	LG05: 232848 .. 236617 (-)
Sequence length	1688
RNA-Seq Expression	Sed0018313.1
Synteny	Sed0018313.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAACTCATTCAACTCGACTCGCCCATCCTTTTTTGCCCTTCTTCATCTTCTTCATCTTCATCTCTGCAATCTCGCCGCTAATTTCTTCGGGTTTTTTCTCTACCAGGTATCCTTTATACTAATTCTTCTCTCTTCTTCTACAATGCCGACTCAATTCTATTTACACCCAATTCCTTCGTTTTCTTCTTTCCATCTTCATGCCGTTCTTTATCGCATACTTTTCTTCTCTTCTATTCCAGCCCCGTTTCATTTTCAATGCTAATTTATTTCTCCCTTCATTATGACTTCACTCGACCTTGTCTCTTCTTTTTCCCCCTTTGTCAAATTTTAGGTTTTGCTGTAATTTCTGATTCTATTGGCGTTAGAGGTTGTTGGGTATGGATTTTTCTGCGTATTTTAGGTCGTGGCTGCAATTTCCTTGATATTCGAGTCTCCATAGTTTAATTCGTCCGGAGATAGCTTCTAGGTTTCAAGCCCAATTCAGGCAGTTTTAGGTGCACGGCCTTGGGATCATGCACACGATACATGGACCTCCTAACCGCATTATCGAAATTCCCTTCTTTTTTTATGTTCTTTTTACTTTTTGAGTTTTAATCTCAGTCGTGAGTGGCATCATTACTTCTATTATCCCGATCATCAGTTCCTAGCTCCCAAAATTAAGCCTAATTCTATAGTCAATATCAATATTCAAGACCGGATGTTTTGTTAAATCTTCTTCTTTATGCATATGTCATGTGATGTGTATACTTCTTCACAAAGGGTTTCTAGGTTGATTTTCTTGGAATCTTCAAAATGGATTTTGTGGAAACCTGTGGATGTCCTTGCATTCTAAGTCATTATTTCGTAATCATGCCTTATGGAGGTGGGTGTTTCCAGGTTTTCTCTTCTCTAGGAATTGATATTGTTACGCGTGAACAGACATGACTATGAAAAGCGGAAGAAAAAAAAAATCATATTCATTGAAGAGAGGGGAGTTCTTCCTCTTATAATCTTGTTCAAAATAAGTTGGAGAGAAAGGCTAGGGCTCTTTCATTCAATTTGCCTTAATCTTCATTCATTAGATTTCTTAGTTGTATGATGGCATTTTCTTTGGTCTTGTTATGCATATTGCATATGCAGTATGCTTTATGTGAAGCGAGGGGTTCTTTGAAGTTCTTTTATTTTTAAAATGTGGATTTTACAGTTTAAAGTTATATCTGGTGAATTGGGCATATGCAGTAAGGAGATTCAAGAGCATCCGGGTTTCTTCTGTGTTATCAAGAATCGACAAGGGATTTACATTCTGATTTATCAAAACCCTCCCCCAATTTGGCATCATCCATCTAAATTTGTTGCATCATAAACATTTTGAACATCCATTAAATTGTAAGGTTTCAAAGATACATCTCTTTAGTTAATTCTTCATTGCTCAATGTGGAAAGGGTTGGACCTGGCTGTGTAGGTTTTTCTTATGTCTAACCTCAGGTGGTTAGCATTTTTCCATAGTTGAGAGCTGCCTATTGATATTAAATAAGAATAATAAAAACATTATGGTGCTCCATGCTAGAGCTATTGATTCAGTGTTTAAGTTCAGAATATAAAATCCTATGTTGATTGCAGCTTCTAAATTGAATTTATGATACCTTGTTCTTTCTTAAATTTGGTCTTTCATGTATTCACTAACCTCTTATTTTCCCAATCCCGATCCTTAGCCTTACATTATTTTGTATATATCTTATCTTATTGACTTACTAATACTAATCTGGTACGAACATTCATTAAATGAAGTACCGTATATTGTAGTTATCCTTTGGACTTGGTCGCTAAAGCATATGGATGAAGTTTAGTTTTTCTGAAATTTTTTGTGTAGCTTTTAATAGGTAAGGAGGTAGGACTCTTACTAGGGAATCTTCTTGTGTCCTGTTTCCTTCCAAATGTCCTTAATTTTGAAGAGGAACTCCTCTCTATTTCTGGGATTGCTCGTCCCTTTATCAGAAATTATTTTCCGGTTGTCAGGAATAATGAAGATTTCCCTCTAATCAGTTAGATGTATGCGTGCTATAACAAGCAGAAAATTTTCTCTTAGAGCATGCGACACACTGGTTTTGTATGGTTCTACTACTTGTATTCATAGTGTCTTTGTGTATGCCAAATGATGTTCGATATTAACTGGTTCTCTAACGTTTGACTATTCTTCTTCACATCTCAGATTATTTGGTTCCTGAATAAGAAACAACCTGCAGTGGATAAGCATCTGAAACGAATGAAAAGAGATTATTATGTCTGAATTGATTGACGGTCTCCCGGACGCTGTTGCCCTTAGGTGCCTTGCTCGTGTTCCCTTCCATCTCTATCCAAAGTTGGAGCTTGTTTCTCACTCCTGGCAAGCTGCCATTCGTAGTTCTGAACTATTCAGAGTTCGACAGGAGATTGGATCATCAGAAGATCTATTATGCGTATGTGCATTTGAACCTGAGAATCTATGGCAGCTATATGACCCCCTTAGAGACCTTTGGATTACAACTCCGGTACTTCCATCGAGAATTAGGCATCTTGCACACTTTGGTGCTGTCTCTACTGCTGGAAAGTTGTTTGTGCTTGGTGGTGGCAGTGATGCTGTTGATCCATTAACTGGTGATCAGGATAGAAACTTTGCAACAAACGAGGTGTGGTCGTATGATCCTGTACTACGTCGGTGGTCTCAATGTGCATCTATGCTTGTACCACGTGCCATGTTTGCGTGCTGTGTTTTGGATGGAAGGATTGTTGTTGCAGGTGGTTTTACTAGCTGTAGAAAATCAATTTCTCAGGCAGAAATGTACATTCCTGATAAAGATGTTTGGATTCCACTGCCTAATCTACAGCATACTCACAATTCTGCTTGCACAGGGGTAGTGATTGGAGGGAAGTTGCACGTCTTGCACAAGGGATTATCGACAGTGCAAATTTTCGAGGAAATGCAGCCTGGATGGAGAGTCGAAGATTATGGTTGGCTCCAAGGTCCAATGGCTGTTGTCCAGGGTTCACTTTATGTGATGAGCCATGGACATATTTTCAAGCATGATGGAGAAGTGAGGAAGGTTGTTGTTTCAGCGTCCGAATTTCGCCAAAGAATAGGGTTTGCGATGATCAGTTTGAGAGATGAAATTTACGTGATTGGAGGAGATATTGGTCCTGACCGCTTGAATTGGGACGTCAAGCCAACGTCTGATGTTGACATATTGACAACAGGAGGTGAGAGACCCACATGGCGACACGCAGCTTCAATGACAAGATGCTGTGGGGCTATTCGGGGATGTGCTCAGTTGAGAATTTAGGACTCCATTTGTTGTTCTGTTTCTACATTGCCATTGAATTGTGTGTTGGCTCAGAATCCCTCCTATTGGCTATCTCTTTTTGTAATATCTGGTCTTTGATGTTAGTTCCAGGGGTATTGTTGATGGTTCTCCTGGAATTTGGATGTTGTTGGAATGGTCTAGAATCTGATAGTACATGAATTTTACAAATTAGTATGATGGAGGATGAAATTTCATTTCTAAATACTTTGAATGAAGAATGATTTGTTGACACCCATATTTTTTTTTTCTCCGTTTTATGGGTTGGACAATTTGGAAGAGGGAAAGACAGCTTTCTGGTCTCAGACAGTAACCCGTGAGTCTACAACTCAAGAACAAAAACGAACGTTTCTCATACAACTTCGAAAACTGATGTAAAACAACCATGTTTTGGAGTGGAGAGTGATATTTAGAATTAGAACCAAGGGTGATGGACGTGGACGACATGTCG

mRNA sequence

AAAAAAAACTCATTCAACTCGACTCGCCCATCCTTTTTTGCCCTTCTTCATCTTCTTCATCTTCATCTCTGCAATCTCGCCGCTAATTTCTTCGGGTTTTTTCTCTACCAGATTATTTGGTTCCTGAATAAGAAACAACCTGCAGTGGATAAGCATCTGAAACGAATGAAAAGAGATTATTATGTCTGAATTGATTGACGGTCTCCCGGACGCTGTTGCCCTTAGGTGCCTTGCTCGTGTTCCCTTCCATCTCTATCCAAAGTTGGAGCTTGTTTCTCACTCCTGGCAAGCTGCCATTCGTAGTTCTGAACTATTCAGAGTTCGACAGGAGATTGGATCATCAGAAGATCTATTATGCGTATGTGCATTTGAACCTGAGAATCTATGGCAGCTATATGACCCCCTTAGAGACCTTTGGATTACAACTCCGGTACTTCCATCGAGAATTAGGCATCTTGCACACTTTGGTGCTGTCTCTACTGCTGGAAAGTTGTTTGTGCTTGGTGGTGGCAGTGATGCTGTTGATCCATTAACTGGTGATCAGGATAGAAACTTTGCAACAAACGAGGTGTGGTCGTATGATCCTGTACTACGTCGGTGGTCTCAATGTGCATCTATGCTTGTACCACGTGCCATGTTTGCGTGCTGTGTTTTGGATGGAAGGATTGTTGTTGCAGGTGGTTTTACTAGCTGTAGAAAATCAATTTCTCAGGCAGAAATGTACATTCCTGATAAAGATGTTTGGATTCCACTGCCTAATCTACAGCATACTCACAATTCTGCTTGCACAGGGGTAGTGATTGGAGGGAAGTTGCACGTCTTGCACAAGGGATTATCGACAGTGCAAATTTTCGAGGAAATGCAGCCTGGATGGAGAGTCGAAGATTATGGTTGGCTCCAAGGTCCAATGGCTGTTGTCCAGGGTTCACTTTATGTGATGAGCCATGGACATATTTTCAAGCATGATGGAGAAGTGAGGAAGGTTGTTGTTTCAGCGTCCGAATTTCGCCAAAGAATAGGGTTTGCGATGATCAGTTTGAGAGATGAAATTTACGTGATTGGAGGAGATATTGGTCCTGACCGCTTGAATTGGGACGTCAAGCCAACGTCTGATGTTGACATATTGACAACAGGAGGTGAGAGACCCACATGGCGACACGCAGCTTCAATGACAAGATGCTGTGGGGCTATTCGGGGATGTGCTCAGTTGAGAATTTAGGACTCCATTTGTTGTTCTGTTTCTACATTGCCATTGAATTGTGTGTTGGCTCAGAATCCCTCCTATTGGCTATCTCTTTTTGTAATATCTGGTCTTTGATGTTAGTTCCAGGGGTATTGTTGATGGTTCTCCTGGAATTTGGATGTTGTTGGAATGGTCTAGAATCTGATAGTACATGAATTTTACAAATTAGTATGATGGAGGATGAAATTTCATTTCTAAATACTTTGAATGAAGAATGATTTGTTGACACCCATATTTTTTTTTTCTCCGTTTTATGGGTTGGACAATTTGGAAGAGGGAAAGACAGCTTTCTGGTCTCAGACAGTAACCCGTGAGTCTACAACTCAAGAACAAAAACGAACGTTTCTCATACAACTTCGAAAACTGATGTAAAACAACCATGTTTTGGAGTGGAGAGTGATATTTAGAATTAGAACCAAGGGTGATGGACGTGGACGACATGTCG

Coding sequence (CDS)

ATGTCTGAATTGATTGACGGTCTCCCGGACGCTGTTGCCCTTAGGTGCCTTGCTCGTGTTCCCTTCCATCTCTATCCAAAGTTGGAGCTTGTTTCTCACTCCTGGCAAGCTGCCATTCGTAGTTCTGAACTATTCAGAGTTCGACAGGAGATTGGATCATCAGAAGATCTATTATGCGTATGTGCATTTGAACCTGAGAATCTATGGCAGCTATATGACCCCCTTAGAGACCTTTGGATTACAACTCCGGTACTTCCATCGAGAATTAGGCATCTTGCACACTTTGGTGCTGTCTCTACTGCTGGAAAGTTGTTTGTGCTTGGTGGTGGCAGTGATGCTGTTGATCCATTAACTGGTGATCAGGATAGAAACTTTGCAACAAACGAGGTGTGGTCGTATGATCCTGTACTACGTCGGTGGTCTCAATGTGCATCTATGCTTGTACCACGTGCCATGTTTGCGTGCTGTGTTTTGGATGGAAGGATTGTTGTTGCAGGTGGTTTTACTAGCTGTAGAAAATCAATTTCTCAGGCAGAAATGTACATTCCTGATAAAGATGTTTGGATTCCACTGCCTAATCTACAGCATACTCACAATTCTGCTTGCACAGGGGTAGTGATTGGAGGGAAGTTGCACGTCTTGCACAAGGGATTATCGACAGTGCAAATTTTCGAGGAAATGCAGCCTGGATGGAGAGTCGAAGATTATGGTTGGCTCCAAGGTCCAATGGCTGTTGTCCAGGGTTCACTTTATGTGATGAGCCATGGACATATTTTCAAGCATGATGGAGAAGTGAGGAAGGTTGTTGTTTCAGCGTCCGAATTTCGCCAAAGAATAGGGTTTGCGATGATCAGTTTGAGAGATGAAATTTACGTGATTGGAGGAGATATTGGTCCTGACCGCTTGAATTGGGACGTCAAGCCAACGTCTGATGTTGACATATTGACAACAGGAGGTGAGAGACCCACATGGCGACACGCAGCTTCAATGACAAGATGCTGTGGGGCTATTCGGGGATGTGCTCAGTTGAGAATTTAG

Protein sequence

MSELIDGLPDAVALRCLARVPFHLYPKLELVSHSWQAAIRSSELFRVRQEIGSSEDLLCVCAFEPENLWQLYDPLRDLWITTPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGDQDRNFATNEVWSYDPVLRRWSQCASMLVPRAMFACCVLDGRIVVAGGFTSCRKSISQAEMYIPDKDVWIPLPNLQHTHNSACTGVVIGGKLHVLHKGLSTVQIFEEMQPGWRVEDYGWLQGPMAVVQGSLYVMSHGHIFKHDGEVRKVVVSASEFRQRIGFAMISLRDEIYVIGGDIGPDRLNWDVKPTSDVDILTTGGERPTWRHAASMTRCCGAIRGCAQLRI

Homology

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BLAST of Sed0018313.1 vs. NCBI nr
Match: XP_023511586.1 (F-box/kelch-repeat protein SKIP30 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 681.8 bits (1758), Expect = 3.1e-192
Identity = 322/345 (93.33%), Postives = 332/345 (96.23%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSHSWQAAIRSSELFRVRQEIGSSEDLLCV 60
           MSELIDGLPDAVALRCLARVPFHLYPKLELVS SW AAIRSSELFRVRQEIGSSEDLLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITTPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 120
           CAFEPENLWQLYDPLRDLWIT PVLPSRIRHLAHFGAVSTAGKLFVLGGGSD VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVLRRWSQCASMLVPRAMFACCVLDGRIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDP++ RW Q ASMLVPRAMFACCVL GRIVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180

Query: 181 YIPDKDVWIPLPNLQHTHNSACTGVVIGGKLHVLHKGLSTVQIFEEMQPGWRVEDYGWLQ 240
           Y PDKDVWIPLP+L HTHNSACTGVVIGGKLHVLHKGLSTVQIF+++Q  WRVEDYGWLQ
Sbjct: 181 YDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQIFDDVQLEWRVEDYGWLQ 240

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVVSASEFRQRIGFAMISLRDEIYVIGGDIGPD 300
           GPMAVVQGSLYVMSHGHIFKHDGEVRKVV+SASEFRQRIGFAMI LRDEIYVIGGDIGPD
Sbjct: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRHAASMTRCCGAIRGCAQLRI 346
           RLNWD+KPTSDVDILTTGGERPTWRHAASMT+CCGAIRGCA+LRI
Sbjct: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345

[Close]

BLAST of Sed0018313.1 vs. NCBI nr
Match: XP_022931065.1 (F-box/kelch-repeat protein SKIP30-like [Cucurbita moschata] >XP_022931066.1 F-box/kelch-repeat protein SKIP30-like [Cucurbita moschata] >XP_022931067.1 F-box/kelch-repeat protein SKIP30-like [Cucurbita moschata])

HSP 1 Score: 678.7 bits (1750), Expect = 2.6e-191
Identity = 318/345 (92.17%), Postives = 331/345 (95.94%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSHSWQAAIRSSELFRVRQEIGSSEDLLCV 60
           MSELID LPDAVALRCLARVPFHLYPKLELVSHSWQAAI S+EL+RVRQEIGSSEDLLCV
Sbjct: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITTPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 120
           CAFEPENLWQLYDPLRDLW+T PVLPS+IRHLA FGAVSTAGKLFVLGGGSD+VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVLRRWSQCASMLVPRAMFACCVLDGRIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDPV+RRWSQCASMLVPRAMFACCVLDG+IVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180

Query: 181 YIPDKDVWIPLPNLQHTHNSACTGVVIGGKLHVLHKGLSTVQIFEEMQPGWRVEDYGWLQ 240
           Y PDKD WIPLP+L HTH+SACTGVVIGGKLHVLHKGLSTVQIFE  +PGWRVEDYGWLQ
Sbjct: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVVSASEFRQRIGFAMISLRDEIYVIGGDIGPD 300
           GPM VVQGSLYVMSHGHIFKHDGE +KVV+SASEFRQRIGFAM+SLRDEIYVIGGDIGPD
Sbjct: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRHAASMTRCCGAIRGCAQLRI 346
           RLNWDVKPTSDVDILTTGGERPTWR A SMTRC GAIRGCAQLRI
Sbjct: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 345

[Close]

BLAST of Sed0018313.1 vs. NCBI nr
Match: XP_022963882.1 (F-box/kelch-repeat protein SKIP30 [Cucurbita moschata] >XP_022967369.1 F-box/kelch-repeat protein SKIP30 [Cucurbita maxima] >KAG6571462.1 F-box/kelch-repeat protein SKIP30, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011226.1 F-box/kelch-repeat protein SKIP30, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 678.3 bits (1749), Expect = 3.4e-191
Identity = 320/345 (92.75%), Postives = 331/345 (95.94%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSHSWQAAIRSSELFRVRQEIGSSEDLLCV 60
           MSELIDGLPDAVALRCLARVPFHLYPKLELVS SW AAIRSSELFRVRQEIGSSEDLLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITTPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 120
           CAFEPENLWQLYDPLRDLWIT PVLPSRIRHLAHFGAVSTAGKLFVLGGGSD VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVLRRWSQCASMLVPRAMFACCVLDGRIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDP++ RW Q ASMLVPRAMFACCVL GRIVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180

Query: 181 YIPDKDVWIPLPNLQHTHNSACTGVVIGGKLHVLHKGLSTVQIFEEMQPGWRVEDYGWLQ 240
           Y PD+DVWIPLP+L HTHNSACTGVVIGGKLHVLHKGLSTVQI +++Q  WRVEDYGWLQ
Sbjct: 181 YDPDRDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQILDDVQLEWRVEDYGWLQ 240

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVVSASEFRQRIGFAMISLRDEIYVIGGDIGPD 300
           GPMAVVQGSLYVMSHGHIFKHDGEVRKVV+SASEFRQRIGFAMI LRDEIYVIGGDIGPD
Sbjct: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRHAASMTRCCGAIRGCAQLRI 346
           RLNWD+KPTSDVDILTTGGERPTWRHAASMT+CCGAIRGCA+LRI
Sbjct: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345

[Close]

BLAST of Sed0018313.1 vs. NCBI nr
Match: KAG6606420.1 (F-box/kelch-repeat protein SKIP30, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036358.1 F-box/kelch-repeat protein SKIP30, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 677.9 bits (1748), Expect = 4.5e-191
Identity = 318/345 (92.17%), Postives = 330/345 (95.65%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSHSWQAAIRSSELFRVRQEIGSSEDLLCV 60
           MSELID LPDAVALRCLARVPFHLYPKLELVSHSWQAAI S+EL+RVRQEIGSSEDLLCV
Sbjct: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITTPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 120
           CAFEPENLWQLYDPLRDLW+T PVLPS+IRHLA FGAVSTAGKLFVLGGGSD+VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVLRRWSQCASMLVPRAMFACCVLDGRIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDPV+RRWSQCASMLVPRAMFACCVLDG IVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGNIVVAGGFTSCRKSISQAEM 180

Query: 181 YIPDKDVWIPLPNLQHTHNSACTGVVIGGKLHVLHKGLSTVQIFEEMQPGWRVEDYGWLQ 240
           Y PDKD WIPLP+L HTH+SACTGVVIGGKLHVLHKGLSTVQIFE  +PGWRVEDYGWLQ
Sbjct: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVVSASEFRQRIGFAMISLRDEIYVIGGDIGPD 300
           GPM VVQGSLYVMSHGHIFKHDGE +KVV+SASEFRQRIGFAM+SLRDEIYVIGGDIGPD
Sbjct: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRHAASMTRCCGAIRGCAQLRI 346
           RLNWDVKPTSDVDILTTGGERPTWR A SMTRC GAIRGCAQLRI
Sbjct: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 345

[Close]

BLAST of Sed0018313.1 vs. NCBI nr
Match: XP_022996118.1 (F-box/kelch-repeat protein SKIP30-like [Cucurbita maxima] >XP_022996119.1 F-box/kelch-repeat protein SKIP30-like [Cucurbita maxima] >XP_022996120.1 F-box/kelch-repeat protein SKIP30-like [Cucurbita maxima] >XP_022996121.1 F-box/kelch-repeat protein SKIP30-like [Cucurbita maxima])

HSP 1 Score: 676.8 bits (1745), Expect = 1.0e-190
Identity = 316/345 (91.59%), Postives = 331/345 (95.94%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSHSWQAAIRSSELFRVRQEIGSSEDLLCV 60
           MSELID LPDAVALRCLARVPFHLYP+LELVSHSWQAAI S+EL+RVRQEIGSSEDLLCV
Sbjct: 1   MSELIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITTPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 120
           CAFEPENLWQLYDPLRDLW+T PVLPS+IRHLA FGAVSTAGKLFVLGGGSD+VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVLRRWSQCASMLVPRAMFACCVLDGRIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDPV+RRWSQCASMLVPRAMFACCVLDG+IVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180

Query: 181 YIPDKDVWIPLPNLQHTHNSACTGVVIGGKLHVLHKGLSTVQIFEEMQPGWRVEDYGWLQ 240
           Y PDKD WIPLP+L HTH+SACTGVVIGGKLHVLHKGLSTVQIFE  +PGWRVEDYGWLQ
Sbjct: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVVSASEFRQRIGFAMISLRDEIYVIGGDIGPD 300
           GPM VVQGSLYVMSHGHIFKHDGE +KV++SASEFRQRIGFAM+SLRDEIYVIGGDIGPD
Sbjct: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVIISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRHAASMTRCCGAIRGCAQLRI 346
           RLNWDVKPTSDVDILTTGGERPTWR A SMTRC GAIRGCAQLRI
Sbjct: 301 RLNWDVKPTSDVDILTTGGERPTWRRATSMTRCHGAIRGCAQLRI 345

[Close]

BLAST of Sed0018313.1 vs. ExPASy Swiss-Prot
Match: Q9M1W7 (F-box/kelch-repeat protein SKIP30 OS=Arabidopsis thaliana OX=3702 GN=SKIP30 PE=1 SV=2)

HSP 1 Score: 523.1 bits (1346), Expect = 2.4e-147
Identity = 240/345 (69.57%), Postives = 283/345 (82.03%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSHSWQAAIRSSELFRVRQEIGSSEDLLCV 60
           MS L+DG+P+AVALRCLA VP HL+P LELVS SW+AAIRS ELFRVR+E+ SSE LLCV
Sbjct: 8   MSGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCV 67

Query: 61  CAFEPENLWQLYDPLRDLWITTPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 120
           CAF+PEN+WQ+Y P  D W+T P+LPSRIRHLAHFGAV+TAG LFVLGGGSDAV P+TGD
Sbjct: 68  CAFDPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGGGSDAVSPVTGD 127

Query: 121 QDRNFATNEVWSYDPVLRRWSQCASMLVPRAMFACCVLDGRIVVAGGFTSCRKSISQAEM 180
            D  FAT++VWSYD V R+W+  ASMLVPRAMFACCVL G+IVVAGGFT+CRKSIS AEM
Sbjct: 128 HDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSISGAEM 187

Query: 181 YIPDKDVWIPLPNLQHTHNSACTGVVIGGKLHVLHKGLSTVQIFEEMQPGWRVEDYGWLQ 240
           Y P+ DVW  +P+L  THNSAC+G+V+ GK+HVLHKGLSTVQ+ E ++ GW V+DYGW Q
Sbjct: 188 YDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVLHKGLSTVQVLESVKLGWDVKDYGWPQ 247

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVVSASEFRQRIGFAMISLRDEIYVIGGDIGPD 300
           GPM VV+  LYVMSHG +FK +G+  K+V SASEF++RIG AM SL DE+ ++GG IGPD
Sbjct: 248 GPMVVVEDVLYVMSHGLVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGPD 307

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRHAASMTRCCGAIRGCAQLRI 346
           RLNWD+KP SDVD LT G +RP WR  A MTRC G I GC QL I
Sbjct: 308 RLNWDIKPLSDVDALTVGNDRPAWRSVAPMTRCRGTILGCTQLTI 352

[Close]

BLAST of Sed0018313.1 vs. ExPASy Swiss-Prot
Match: Q0WW40 (F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana OX=3702 GN=At1g16250 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 5.0e-28
Identity = 105/383 (27.42%), Postives = 161/383 (42.04%), Query Frame = 0


Query: 4   LIDGLPDAVALRCLARVPFHLYPKLELVSHSWQAAIRSSELFRVRQEIGSSEDLLCVCAF 63
           +I GLPD +ALRC+A++    +  LE VS  W+  +R ++    +   G S   L V   
Sbjct: 8   IIPGLPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRGADYSCYKARNGWSGSWLFVLTE 67

Query: 64  EPENLWQLYDPLRDLWITTPVLPSRIR------HLAHFGAVSTAGKLFVLGGGSDAVDPL 123
             +N W  YDP  D W   P    R R      H + F  V  +  L V+ GG  A    
Sbjct: 68  RSKNQWVAYDPEADRWHPLP----RTRAVQDGWHHSGFACVCVSNCLLVI-GGCYAPSVS 127

Query: 124 TGDQDRNFATNEVWSYDPVLRRWSQCASMLVPRAMFACCVLDGRIVVAGGFT-SCRKSIS 183
           +    +   T +V  +DP  ++W   ASM  PR  FAC  + G++ VAGG   +  + I 
Sbjct: 128 SFPHQKPVVTKDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRNLTHSRGIP 187

Query: 184 QAEMYIPDKDVWIPLPNLQHTHNSACTGVVIGGKLHVLHKGL-----STVQIFEEMQPGW 243
            AE+Y P  D W  LP +       C+G+   G  HVL   +     ++ ++F      W
Sbjct: 188 SAEVYDPVADRWEELPAMPRPQMD-CSGLSYRGCFHVLSDQVGFAEQNSSEVFNPRDMTW 247

Query: 244 RVEDYGWLQGPMA-VVQGSLYVMSHGHIFK--------------------HDGEVRKVVV 303
              +  W   P +  +Q ++ VM +  ++                     + G V  VV+
Sbjct: 248 STVEDVW---PFSRAMQFAVQVMKNDRVYTIVDWGESLIKTRDTDEGEWYNVGSVPSVVL 307

Query: 304 -SASEFRQRIGFAMISLRDEIYVIGGDIGPDRLNWDVKPTSDVDI-------LTTGGERP 344
            +     +  G+   +LR+E+YVIGG +    L W+       DI       +    +RP
Sbjct: 308 PNHPRELEAFGYGFAALRNELYVIGGKV----LKWEESGAGRFDIVRLPVVRVCNPLDRP 367

[Close]

BLAST of Sed0018313.1 vs. ExPASy Swiss-Prot
Match: Q9LM55 (F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana OX=3702 GN=At1g22040 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 4.6e-21
Identity = 68/248 (27.42%), Postives = 115/248 (46.37%), Query Frame = 0


Query: 4   LIDGLPDAVALRCLARVPFHLYPKLELVSHSWQAAIRSSELFRVRQEIGSSEDLLCVC-- 63
           LI  LPD ++++ LAR+P   Y  + LVS  W++A+ +SE++ +R+E+G +E+ L V   
Sbjct: 43  LIPSLPDELSIQILARLPRICYSSVRLVSRRWRSAVSTSEVYSLRKELGRTEEWLYVLTK 102

Query: 64  AFEPENLWQLYDPLRDLWITTPVLP----------------SRIRHLAHFGAV------- 123
             E + LW   DP+   W   P +P                + I    + GA+       
Sbjct: 103 GHEDKLLWYALDPVSTKWQRLPPMPVVVYEEESRKSLSGLWNMITPSFNVGAIVRSFLGR 162

Query: 124 -STAGKLFVLGGGSDAVDP---LTGDQDRNFATNEVWSYDPVLRRWSQCASMLVPRAMFA 183
             ++ ++   G    AVD    + G   R+   + VW +DP+L  WS+ +SML  RA   
Sbjct: 163 RDSSEQMPFCGCAIGAVDGGLYVIGGLSRSKTVSCVWRFDPILNSWSEVSSMLASRAYSK 222

Query: 184 CCVLDGRIVVAGGFTSCRKSIS---QAEMYIPDKDVWIPLPNLQHTHNSACTGVVIGGKL 220
             VL+ ++ V GG    R  +S    AE+Y P  D W  +P++  +         +   L
Sbjct: 223 TGVLNKKLYVVGGVDRGRGGLSPLQSAEVYDPSTDAWSEVPSMPFSKAQVLPNAFLADLL 282

[Close]

BLAST of Sed0018313.1 vs. ExPASy Swiss-Prot
Match: Q9FKJ0 (F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana OX=3702 GN=At5g60570 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.3e-20
Identity = 70/237 (29.54%), Postives = 108/237 (45.57%), Query Frame = 0


Query: 4   LIDGLPDAVALRCLARVPFHLYPKLELVSHSWQAAIRSSELFRVRQEIGSSEDLL-CVCA 63
           ++ GL D VAL CLA VP   YP L  V+  +   I S  LF +R+E+G  E L+  VC 
Sbjct: 49  VLPGLIDDVALNCLAWVPRSDYPSLSCVNKKYNKLINSGHLFALRKELGIVEYLVFMVC- 108

Query: 64  FEPENLWQLYDPLRDLWITTPVLP-SRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGDQ 123
            +P   W ++ P++  W+  P +P     + A   +++   +L V G             
Sbjct: 109 -DPRG-WLMFSPMKKKWMVLPKMPCDECFNHADKESLAVDDELLVFG------------- 168

Query: 124 DRNFATNEVWSYDPVLRRWSQCASMLVPRAMFACCVLDGRIVVAGGFTSCRKSISQAEMY 183
            R      +W Y    R W +C  M  PR +FA   L G  +VAGG       ++ AE+Y
Sbjct: 169 -RELFQFAIWKYSLRSRCWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELY 228

Query: 184 IPDKDVWIPLPNLQHTHNSACTGVVIGGKLHVLHKGLSTVQIFEEMQPGWRVEDYGW 239
                 W  LPN+ H+    C+G  + GK +V+  G+S+  +       + +E   W
Sbjct: 229 DSSSGRWEMLPNM-HSPRRLCSGFFMDGKFYVI-GGMSSPNVSVTFGEEFDLETRKW 266

[Close]

BLAST of Sed0018313.1 vs. ExPASy Swiss-Prot
Match: Q9FZJ3 (Putative F-box/kelch-repeat protein At1g27420 OS=Arabidopsis thaliana OX=3702 GN=At1g27420 PE=4 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 2.3e-17
Identity = 60/236 (25.42%), Postives = 103/236 (43.64%), Query Frame = 0


Query: 2   SELIDGLPDAVALRCLARVPFHLYPKLELVSHSWQAAIRSSELFRVRQEIGSSEDLLCVC 61
           S +I GL D VA  C++++P   +     V   W++ +RS     VR+  G+ E+ LCV 
Sbjct: 8   SPIIPGLTDDVAELCVSKIPRSSFQITSQVCRRWRSFLRSQHFAAVRKLTGTVEEFLCVL 67

Query: 62  AFEP---ENLWQLYDPLRDLWITTPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLT 121
                  +  W+++D   +     P +P  ++    FG     G   V  GG   V+   
Sbjct: 68  MESECGRDVYWEVFDASGNKLGQIPPVPGPLKR--GFGVAVLDGGKIVFFGGYTEVEGSG 127

Query: 122 GDQDRNFATNEVWSYDPVLRRWSQCASMLVPRAMFACCVLDGRIVVAGGFTSCRKSISQA 181
            +     A+ +V+ +DP    W + A M +PR  FA   ++G + V  G+++   S+S A
Sbjct: 128 INSTTVSASADVYEFDPANNSWRKLAGMNIPRYNFAFAEVNGLLYVIRGYSTDTYSLSNA 187

Query: 182 EMYIPDKDVWIPLPNLQHTHNSAC---TGVVIGGKLHVLHKGLSTVQIFEEMQPGW 232
           E+Y P  + W    +L H  N             KL+ +  G   + I++     W
Sbjct: 188 EVYNPKTNQW----SLMHCPNRPVWRGFAFAFSSKLYAVGNGSRFIDIYDPKTQTW 237

[Close]

BLAST of Sed0018313.1 vs. ExPASy TrEMBL
Match: A0A6J1ESG5 (F-box/kelch-repeat protein SKIP30-like OS=Cucurbita moschata OX=3662 GN=LOC111437365 PE=4 SV=1)

HSP 1 Score: 678.7 bits (1750), Expect = 1.3e-191
Identity = 318/345 (92.17%), Postives = 331/345 (95.94%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSHSWQAAIRSSELFRVRQEIGSSEDLLCV 60
           MSELID LPDAVALRCLARVPFHLYPKLELVSHSWQAAI S+EL+RVRQEIGSSEDLLCV
Sbjct: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITTPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 120
           CAFEPENLWQLYDPLRDLW+T PVLPS+IRHLA FGAVSTAGKLFVLGGGSD+VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVLRRWSQCASMLVPRAMFACCVLDGRIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDPV+RRWSQCASMLVPRAMFACCVLDG+IVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180

Query: 181 YIPDKDVWIPLPNLQHTHNSACTGVVIGGKLHVLHKGLSTVQIFEEMQPGWRVEDYGWLQ 240
           Y PDKD WIPLP+L HTH+SACTGVVIGGKLHVLHKGLSTVQIFE  +PGWRVEDYGWLQ
Sbjct: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVVSASEFRQRIGFAMISLRDEIYVIGGDIGPD 300
           GPM VVQGSLYVMSHGHIFKHDGE +KVV+SASEFRQRIGFAM+SLRDEIYVIGGDIGPD
Sbjct: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRHAASMTRCCGAIRGCAQLRI 346
           RLNWDVKPTSDVDILTTGGERPTWR A SMTRC GAIRGCAQLRI
Sbjct: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 345

[Close]

BLAST of Sed0018313.1 vs. ExPASy TrEMBL
Match: A0A6J1HWH7 (F-box/kelch-repeat protein SKIP30 OS=Cucurbita maxima OX=3661 GN=LOC111466917 PE=4 SV=1)

HSP 1 Score: 678.3 bits (1749), Expect = 1.7e-191
Identity = 320/345 (92.75%), Postives = 331/345 (95.94%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSHSWQAAIRSSELFRVRQEIGSSEDLLCV 60
           MSELIDGLPDAVALRCLARVPFHLYPKLELVS SW AAIRSSELFRVRQEIGSSEDLLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITTPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 120
           CAFEPENLWQLYDPLRDLWIT PVLPSRIRHLAHFGAVSTAGKLFVLGGGSD VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVLRRWSQCASMLVPRAMFACCVLDGRIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDP++ RW Q ASMLVPRAMFACCVL GRIVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180

Query: 181 YIPDKDVWIPLPNLQHTHNSACTGVVIGGKLHVLHKGLSTVQIFEEMQPGWRVEDYGWLQ 240
           Y PD+DVWIPLP+L HTHNSACTGVVIGGKLHVLHKGLSTVQI +++Q  WRVEDYGWLQ
Sbjct: 181 YDPDRDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQILDDVQLEWRVEDYGWLQ 240

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVVSASEFRQRIGFAMISLRDEIYVIGGDIGPD 300
           GPMAVVQGSLYVMSHGHIFKHDGEVRKVV+SASEFRQRIGFAMI LRDEIYVIGGDIGPD
Sbjct: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRHAASMTRCCGAIRGCAQLRI 346
           RLNWD+KPTSDVDILTTGGERPTWRHAASMT+CCGAIRGCA+LRI
Sbjct: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345

[Close]

BLAST of Sed0018313.1 vs. ExPASy TrEMBL
Match: A0A6J1HGE3 (F-box/kelch-repeat protein SKIP30 OS=Cucurbita moschata OX=3662 GN=LOC111464058 PE=4 SV=1)

HSP 1 Score: 678.3 bits (1749), Expect = 1.7e-191
Identity = 320/345 (92.75%), Postives = 331/345 (95.94%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSHSWQAAIRSSELFRVRQEIGSSEDLLCV 60
           MSELIDGLPDAVALRCLARVPFHLYPKLELVS SW AAIRSSELFRVRQEIGSSEDLLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITTPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 120
           CAFEPENLWQLYDPLRDLWIT PVLPSRIRHLAHFGAVSTAGKLFVLGGGSD VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVLRRWSQCASMLVPRAMFACCVLDGRIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDP++ RW Q ASMLVPRAMFACCVL GRIVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180

Query: 181 YIPDKDVWIPLPNLQHTHNSACTGVVIGGKLHVLHKGLSTVQIFEEMQPGWRVEDYGWLQ 240
           Y PD+DVWIPLP+L HTHNSACTGVVIGGKLHVLHKGLSTVQI +++Q  WRVEDYGWLQ
Sbjct: 181 YDPDRDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQILDDVQLEWRVEDYGWLQ 240

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVVSASEFRQRIGFAMISLRDEIYVIGGDIGPD 300
           GPMAVVQGSLYVMSHGHIFKHDGEVRKVV+SASEFRQRIGFAMI LRDEIYVIGGDIGPD
Sbjct: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRHAASMTRCCGAIRGCAQLRI 346
           RLNWD+KPTSDVDILTTGGERPTWRHAASMT+CCGAIRGCA+LRI
Sbjct: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345

[Close]

BLAST of Sed0018313.1 vs. ExPASy TrEMBL
Match: A0A6J1K7U2 (F-box/kelch-repeat protein SKIP30-like OS=Cucurbita maxima OX=3661 GN=LOC111491436 PE=4 SV=1)

HSP 1 Score: 676.8 bits (1745), Expect = 4.8e-191
Identity = 316/345 (91.59%), Postives = 331/345 (95.94%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSHSWQAAIRSSELFRVRQEIGSSEDLLCV 60
           MSELID LPDAVALRCLARVPFHLYP+LELVSHSWQAAI S+EL+RVRQEIGSSEDLLCV
Sbjct: 1   MSELIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITTPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 120
           CAFEPENLWQLYDPLRDLW+T PVLPS+IRHLA FGAVSTAGKLFVLGGGSD+VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVLRRWSQCASMLVPRAMFACCVLDGRIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDPV+RRWSQCASMLVPRAMFACCVLDG+IVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180

Query: 181 YIPDKDVWIPLPNLQHTHNSACTGVVIGGKLHVLHKGLSTVQIFEEMQPGWRVEDYGWLQ 240
           Y PDKD WIPLP+L HTH+SACTGVVIGGKLHVLHKGLSTVQIFE  +PGWRVEDYGWLQ
Sbjct: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVVSASEFRQRIGFAMISLRDEIYVIGGDIGPD 300
           GPM VVQGSLYVMSHGHIFKHDGE +KV++SASEFRQRIGFAM+SLRDEIYVIGGDIGPD
Sbjct: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVIISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRHAASMTRCCGAIRGCAQLRI 346
           RLNWDVKPTSDVDILTTGGERPTWR A SMTRC GAIRGCAQLRI
Sbjct: 301 RLNWDVKPTSDVDILTTGGERPTWRRATSMTRCHGAIRGCAQLRI 345

[Close]

BLAST of Sed0018313.1 vs. ExPASy TrEMBL
Match: A0A6J1CW43 (F-box/kelch-repeat protein SKIP30 OS=Momordica charantia OX=3673 GN=LOC111015334 PE=4 SV=1)

HSP 1 Score: 652.9 bits (1683), Expect = 7.5e-184
Identity = 307/345 (88.99%), Postives = 324/345 (93.91%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSHSWQAAIRSSELFRVRQEIGSSEDLLCV 60
           MSELIDGLPDAVALRCLARVPFHLY  LELVSHSW+AAIRS+ELFRVR+EIGSSE+LLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITTPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 120
           CAFEPENLWQLYDPLRDLWIT PV PS+IRHLAHFGAVSTAGKLFV+GGGSDAVDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVLRRWSQCASMLVPRAMFACCVLDGRIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDPV+ +WSQ A MLV RAMFACCVL G+IVVAGGFTSCRKSISQAE+
Sbjct: 121 QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEV 180

Query: 181 YIPDKDVWIPLPNLQHTHNSACTGVVIGGKLHVLHKGLSTVQIFEEMQPGWRVEDYGWLQ 240
           Y PDKDVWIPLP+L HTHNSACTG VIGGKLHVLHKGLSTVQIF+ ++PGWRVEDYGWLQ
Sbjct: 181 YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVLHKGLSTVQIFDNVRPGWRVEDYGWLQ 240

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVVSASEFRQRIGFAMISLRDEIYVIGGDIGPD 300
           GPM VVQ SLYVMSHG IFKHD EVRKVV+SASEFRQRIGFAMI LRDEIYVIGGDIGPD
Sbjct: 241 GPMVVVQDSLYVMSHGLIFKHDKEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRHAASMTRCCGAIRGCAQLRI 346
           RLNWD+KPTSDVDILTT GERPTWRHAA MTRC GAIRGCA+LRI
Sbjct: 301 RLNWDIKPTSDVDILTTAGERPTWRHAAPMTRCRGAIRGCAELRI 345

[Close]

BLAST of Sed0018313.1 vs. TAIR 10
Match: AT3G63220.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 523.1 bits (1346), Expect = 1.7e-148
Identity = 240/345 (69.57%), Postives = 283/345 (82.03%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSHSWQAAIRSSELFRVRQEIGSSEDLLCV 60
           MS L+DG+P+AVALRCLA VP HL+P LELVS SW+AAIRS ELFRVR+E+ SSE LLCV
Sbjct: 1   MSGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITTPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 120
           CAF+PEN+WQ+Y P  D W+T P+LPSRIRHLAHFGAV+TAG LFVLGGGSDAV P+TGD
Sbjct: 61  CAFDPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGGGSDAVSPVTGD 120

Query: 121 QDRNFATNEVWSYDPVLRRWSQCASMLVPRAMFACCVLDGRIVVAGGFTSCRKSISQAEM 180
            D  FAT++VWSYD V R+W+  ASMLVPRAMFACCVL G+IVVAGGFT+CRKSIS AEM
Sbjct: 121 HDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSISGAEM 180

Query: 181 YIPDKDVWIPLPNLQHTHNSACTGVVIGGKLHVLHKGLSTVQIFEEMQPGWRVEDYGWLQ 240
           Y P+ DVW  +P+L  THNSAC+G+V+ GK+HVLHKGLSTVQ+ E ++ GW V+DYGW Q
Sbjct: 181 YDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVLHKGLSTVQVLESVKLGWDVKDYGWPQ 240

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVVSASEFRQRIGFAMISLRDEIYVIGGDIGPD 300
           GPM VV+  LYVMSHG +FK +G+  K+V SASEF++RIG AM SL DE+ ++GG IGPD
Sbjct: 241 GPMVVVEDVLYVMSHGLVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRHAASMTRCCGAIRGCAQLRI 346
           RLNWD+KP SDVD LT G +RP WR  A MTRC G I GC QL I
Sbjct: 301 RLNWDIKPLSDVDALTVGNDRPAWRSVAPMTRCRGTILGCTQLTI 345

[Close]

BLAST of Sed0018313.1 vs. TAIR 10
Match: AT3G63220.2 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 523.1 bits (1346), Expect = 1.7e-148
Identity = 240/345 (69.57%), Postives = 283/345 (82.03%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSHSWQAAIRSSELFRVRQEIGSSEDLLCV 60
           MS L+DG+P+AVALRCLA VP HL+P LELVS SW+AAIRS ELFRVR+E+ SSE LLCV
Sbjct: 8   MSGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCV 67

Query: 61  CAFEPENLWQLYDPLRDLWITTPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 120
           CAF+PEN+WQ+Y P  D W+T P+LPSRIRHLAHFGAV+TAG LFVLGGGSDAV P+TGD
Sbjct: 68  CAFDPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGGGSDAVSPVTGD 127

Query: 121 QDRNFATNEVWSYDPVLRRWSQCASMLVPRAMFACCVLDGRIVVAGGFTSCRKSISQAEM 180
            D  FAT++VWSYD V R+W+  ASMLVPRAMFACCVL G+IVVAGGFT+CRKSIS AEM
Sbjct: 128 HDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSISGAEM 187

Query: 181 YIPDKDVWIPLPNLQHTHNSACTGVVIGGKLHVLHKGLSTVQIFEEMQPGWRVEDYGWLQ 240
           Y P+ DVW  +P+L  THNSAC+G+V+ GK+HVLHKGLSTVQ+ E ++ GW V+DYGW Q
Sbjct: 188 YDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVLHKGLSTVQVLESVKLGWDVKDYGWPQ 247

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVVSASEFRQRIGFAMISLRDEIYVIGGDIGPD 300
           GPM VV+  LYVMSHG +FK +G+  K+V SASEF++RIG AM SL DE+ ++GG IGPD
Sbjct: 248 GPMVVVEDVLYVMSHGLVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGPD 307

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRHAASMTRCCGAIRGCAQLRI 346
           RLNWD+KP SDVD LT G +RP WR  A MTRC G I GC QL I
Sbjct: 308 RLNWDIKPLSDVDALTVGNDRPAWRSVAPMTRCRGTILGCTQLTI 352

[Close]

BLAST of Sed0018313.1 vs. TAIR 10
Match: AT1G16250.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 126.7 bits (317), Expect = 3.6e-29
Identity = 105/383 (27.42%), Postives = 161/383 (42.04%), Query Frame = 0


Query: 4   LIDGLPDAVALRCLARVPFHLYPKLELVSHSWQAAIRSSELFRVRQEIGSSEDLLCVCAF 63
           +I GLPD +ALRC+A++    +  LE VS  W+  +R ++    +   G S   L V   
Sbjct: 8   IIPGLPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRGADYSCYKARNGWSGSWLFVLTE 67

Query: 64  EPENLWQLYDPLRDLWITTPVLPSRIR------HLAHFGAVSTAGKLFVLGGGSDAVDPL 123
             +N W  YDP  D W   P    R R      H + F  V  +  L V+ GG  A    
Sbjct: 68  RSKNQWVAYDPEADRWHPLP----RTRAVQDGWHHSGFACVCVSNCLLVI-GGCYAPSVS 127

Query: 124 TGDQDRNFATNEVWSYDPVLRRWSQCASMLVPRAMFACCVLDGRIVVAGGFT-SCRKSIS 183
           +    +   T +V  +DP  ++W   ASM  PR  FAC  + G++ VAGG   +  + I 
Sbjct: 128 SFPHQKPVVTKDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRNLTHSRGIP 187

Query: 184 QAEMYIPDKDVWIPLPNLQHTHNSACTGVVIGGKLHVLHKGL-----STVQIFEEMQPGW 243
            AE+Y P  D W  LP +       C+G+   G  HVL   +     ++ ++F      W
Sbjct: 188 SAEVYDPVADRWEELPAMPRPQMD-CSGLSYRGCFHVLSDQVGFAEQNSSEVFNPRDMTW 247

Query: 244 RVEDYGWLQGPMA-VVQGSLYVMSHGHIFK--------------------HDGEVRKVVV 303
              +  W   P +  +Q ++ VM +  ++                     + G V  VV+
Sbjct: 248 STVEDVW---PFSRAMQFAVQVMKNDRVYTIVDWGESLIKTRDTDEGEWYNVGSVPSVVL 307

Query: 304 -SASEFRQRIGFAMISLRDEIYVIGGDIGPDRLNWDVKPTSDVDI-------LTTGGERP 344
            +     +  G+   +LR+E+YVIGG +    L W+       DI       +    +RP
Sbjct: 308 PNHPRELEAFGYGFAALRNELYVIGGKV----LKWEESGAGRFDIVRLPVVRVCNPLDRP 367

[Close]

BLAST of Sed0018313.1 vs. TAIR 10
Match: AT1G22040.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 103.6 bits (257), Expect = 3.2e-22
Identity = 68/248 (27.42%), Postives = 115/248 (46.37%), Query Frame = 0


Query: 4   LIDGLPDAVALRCLARVPFHLYPKLELVSHSWQAAIRSSELFRVRQEIGSSEDLLCVC-- 63
           LI  LPD ++++ LAR+P   Y  + LVS  W++A+ +SE++ +R+E+G +E+ L V   
Sbjct: 43  LIPSLPDELSIQILARLPRICYSSVRLVSRRWRSAVSTSEVYSLRKELGRTEEWLYVLTK 102

Query: 64  AFEPENLWQLYDPLRDLWITTPVLP----------------SRIRHLAHFGAV------- 123
             E + LW   DP+   W   P +P                + I    + GA+       
Sbjct: 103 GHEDKLLWYALDPVSTKWQRLPPMPVVVYEEESRKSLSGLWNMITPSFNVGAIVRSFLGR 162

Query: 124 -STAGKLFVLGGGSDAVDP---LTGDQDRNFATNEVWSYDPVLRRWSQCASMLVPRAMFA 183
             ++ ++   G    AVD    + G   R+   + VW +DP+L  WS+ +SML  RA   
Sbjct: 163 RDSSEQMPFCGCAIGAVDGGLYVIGGLSRSKTVSCVWRFDPILNSWSEVSSMLASRAYSK 222

Query: 184 CCVLDGRIVVAGGFTSCRKSIS---QAEMYIPDKDVWIPLPNLQHTHNSACTGVVIGGKL 220
             VL+ ++ V GG    R  +S    AE+Y P  D W  +P++  +         +   L
Sbjct: 223 TGVLNKKLYVVGGVDRGRGGLSPLQSAEVYDPSTDAWSEVPSMPFSKAQVLPNAFLADLL 282

[Close]

BLAST of Sed0018313.1 vs. TAIR 10
Match: AT1G27420.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 91.3 bits (225), Expect = 1.7e-18
Identity = 60/236 (25.42%), Postives = 103/236 (43.64%), Query Frame = 0


Query: 2   SELIDGLPDAVALRCLARVPFHLYPKLELVSHSWQAAIRSSELFRVRQEIGSSEDLLCVC 61
           S +I GL D VA  C++++P   +     V   W++ +RS     VR+  G+ E+ LCV 
Sbjct: 8   SPIIPGLTDDVAELCVSKIPRSSFQITSQVCRRWRSFLRSQHFAAVRKLTGTVEEFLCVL 67

Query: 62  AFEP---ENLWQLYDPLRDLWITTPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLT 121
                  +  W+++D   +     P +P  ++    FG     G   V  GG   V+   
Sbjct: 68  MESECGRDVYWEVFDASGNKLGQIPPVPGPLKR--GFGVAVLDGGKIVFFGGYTEVEGSG 127

Query: 122 GDQDRNFATNEVWSYDPVLRRWSQCASMLVPRAMFACCVLDGRIVVAGGFTSCRKSISQA 181
            +     A+ +V+ +DP    W + A M +PR  FA   ++G + V  G+++   S+S A
Sbjct: 128 INSTTVSASADVYEFDPANNSWRKLAGMNIPRYNFAFAEVNGLLYVIRGYSTDTYSLSNA 187

Query: 182 EMYIPDKDVWIPLPNLQHTHNSAC---TGVVIGGKLHVLHKGLSTVQIFEEMQPGW 232
           E+Y P  + W    +L H  N             KL+ +  G   + I++     W
Sbjct: 188 EVYNPKTNQW----SLMHCPNRPVWRGFAFAFSSKLYAVGNGSRFIDIYDPKTQTW 237

The following BLAST results are available for this feature:

BLAST of Sed0018313.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023511586.1	3.1e-192	93.33	F-box/kelch-repeat protein SKIP30 [Cucurbita pepo subsp. pepo]	[more]
XP_022931065.1	2.6e-191	92.17	F-box/kelch-repeat protein SKIP30-like [Cucurbita moschata] >XP_022931066.1 F-bo...	[more]
XP_022963882.1	3.4e-191	92.75	F-box/kelch-repeat protein SKIP30 [Cucurbita moschata] >XP_022967369.1 F-box/kel...	[more]
KAG6606420.1	4.5e-191	92.17	F-box/kelch-repeat protein SKIP30, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022996118.1	1.0e-190	91.59	F-box/kelch-repeat protein SKIP30-like [Cucurbita maxima] >XP_022996119.1 F-box/...	[more]

BLAST of Sed0018313.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1W7	2.4e-147	69.57	F-box/kelch-repeat protein SKIP30 OS=Arabidopsis thaliana OX=3702 GN=SKIP30 PE=1...	[more]
Q0WW40	5.0e-28	27.42	F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana OX=3702 GN=At1g1625...	[more]
Q9LM55	4.6e-21	27.42	F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana OX=3702 GN=At1g2204...	[more]
Q9FKJ0	1.3e-20	29.54	F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana OX=3702 GN=At5g6057...	[more]
Q9FZJ3	2.3e-17	25.42	Putative F-box/kelch-repeat protein At1g27420 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Sed0018313.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ESG5	1.3e-191	92.17	F-box/kelch-repeat protein SKIP30-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1HWH7	1.7e-191	92.75	F-box/kelch-repeat protein SKIP30 OS=Cucurbita maxima OX=3661 GN=LOC111466917 PE...	[more]
A0A6J1HGE3	1.7e-191	92.75	F-box/kelch-repeat protein SKIP30 OS=Cucurbita moschata OX=3662 GN=LOC111464058 ...	[more]
A0A6J1K7U2	4.8e-191	91.59	F-box/kelch-repeat protein SKIP30-like OS=Cucurbita maxima OX=3661 GN=LOC1114914...	[more]
A0A6J1CW43	7.5e-184	88.99	F-box/kelch-repeat protein SKIP30 OS=Momordica charantia OX=3673 GN=LOC111015334...	[more]

BLAST of Sed0018313.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63220.1	1.7e-148	69.57	Galactose oxidase/kelch repeat superfamily protein	[more]
AT3G63220.2	1.7e-148	69.57	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G16250.1	3.6e-29	27.42	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G22040.1	3.2e-22	27.42	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G27420.1	1.7e-18	25.42	Galactose oxidase/kelch repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006652	Kelch repeat type 1	SMART	SM00612	kelc_smart	coord: 161..208 e-value: 1.9E-4 score: 30.7 coord: 103..160 e-value: 4.3E-5 score: 32.9
IPR006652	Kelch repeat type 1	PFAM	PF01344	Kelch_1	coord: 278..330 e-value: 1.1E-4 score: 21.7 coord: 149..194 e-value: 6.4E-10 score: 38.5 coord: 92..146 e-value: 3.0E-9 score: 36.3
IPR015915	Kelch-type beta propeller	GENE3D	2.120.10.80		coord: 58..341 e-value: 1.5E-33 score: 118.0
IPR015915	Kelch-type beta propeller	SUPERFAMILY	117281	Kelch motif	coord: 61..329
None	No IPR available	PANTHER	PTHR24414	F-BOX/KELCH-REPEAT PROTEIN SKIP4	coord: 2..345
None	No IPR available	PANTHER	PTHR24414:SF40	F-BOX/KELCH-REPEAT PROTEIN SKIP30	coord: 2..345

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0018313	Sed0018313	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0018313.1-three_prime_utr	Sed0018313.1-three_prime_utr-LG05:232848..233316	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0018313.1-exon	Sed0018313.1-exon-LG05:232848..234424	exon
Sed0018313.1-exon	Sed0018313.1-exon-LG05:236507..236617	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0018313.1-cds	Sed0018313.1-cds-LG05:233317..234354	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0018313.1-five_prime_utr	Sed0018313.1-five_prime_utr-LG05:234355..234424	five_prime_UTR
Sed0018313.1-five_prime_utr	Sed0018313.1-five_prime_utr-LG05:236507..236617	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0018313.1	Sed0018313.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding