Sed0016595.2 (mRNA) Chayote v1

Overview


Name	Sed0016595.2
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	3-isopropylmalate dehydratase
Location	LG14: 3061868 .. 3075613 (-)
Sequence length	2522
RNA-Seq Expression	Sed0016595.2
Synteny	Sed0016595.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGAAATCCGAAACGCGCGGCTGTGAAGTTTGCTTCCAAACAGCCCTATTAAGGCTCGTTCACAACTTGCGAGATACTGAAAGCCGCCTTCACCATATCTTCCAATCGCCTCTCTTTCACTGGCGAGAAGAAATCCCTTTTCTTCATCCTCTTGATTAGCAGCTCAAGCTTTGCTTCCATGGCTACTTCCACCGCCGCCTTGGCATCCACGCCGTTCCTGACCAACAAGGTTCGTTTCAGCTTTCCATTTTCATTGTTCAAAAAGATCTCCAAAATTGACCTGTTCATGTTCTTTATCATCATTCTTCTTGTTAGCGCTCGTGTTTCTGAATTATCTGCTGCTGGATTCAATTCGTATTGAAACCGTCTACTTTTTGTTTTCAGAAGGATTCGGATCTCACTGCTTTTTCTTCGTCGTTGCCGTTTTCGTTTCGGAGATGCGAGAGGACTGTATCGAAGAAAATATGCTCGGTCATGGCACCGCAGCAATCGGAACGCAAGCCTAGCGCCACCGGCTCGGTTGAGTTCTTATTGGCCTTCATCCTGTAAATGAGGTTAAAAGATTATGTGAATTGTAATTGTGCTTTGTCTGTTTACTTTAGGTTAAAACTGCCATGACTATGACGGAGAAGATATTTGCTAAAGCTTCTCAAAAAACTCAGTTGAGCCCTGGTGAAAATGTTTGGGTTAATGTGGACGTTTTGATGACTCATGATGTTTGCGGTCCTGGTTCGATTGGAGTTTTTAAAAAGGAGTTTGGAGAGAATGCCAAGGTATATTTTTGTGTTGGAAGTTCACATTTCTTATTAATTTACTTGCAGTCAAGTTTAATGGATTTAATTTTGAAGTTGTGCTATAAGAGGAAAGGTCTTTAGTATGAAGTTGTCAACTGTCTCTTTCTAAGAAATTTTGTGGTGGCGAAGTGGCGTAACATTCCAGATAAATTTTCAGAAATCGTAAAAATCAGTGGCATTCAACTTAAATCAATCTCACCCTGGAAATCAGTAATTTTTCACCTGTAGTATGAAAGTCTTGTCATGGAATTATAGTCATCCATCATCTACCTATGCACTATCATTGTCCATTTTTTTCAAGAAGATTATCAAGTCTTTTTGGAGTTCAAGAGATATCGATTGTTCTTGAGATATTTTTTGGAGGATCAGGATTATAGTTGAAGATTTGGTCATGAGATATCTTGTGGAAGAACTGGAATATAGCTGAACATTGGCATTGGATGCATAAGCCTTTTGGATTGTCACAAGGAGATTTTCAAGCCTTTTGGATTGTCGTAAGGTTATTATCTTGTAAGTTCTCGGCCAATGCAGGACAAACTCAGTCTCATCCCAGATAGGCAGATACTGGTTATCAAATCGCTAATCAGTGGCTTATTGGCCGTTTTCAGCATGTATAAGGTTTCTCTATGGGTTTATTTATCAATAGCCTTTGCTGGTTGCTCCATTCAGCAGATTGTTTCATCTGGGAAGAAGTTTTTGCTCTGGCTATTTATTCTTCTCTCAGCCTTTTATAGCTTTTGTTTTTTGTATTGTTTTGTTTGTTTATTGTAACTTGCATATTTCCCTCTTCATTTTCTCAATGAAAGACTTTTTCTTGTTTAAAGAAAAAGTGGCGTAGGATTTGCTTGAATAAATCTTGAGCATGCTTCGGAATTTTATAGTGGTGTCTGAATAAAGTTGTGCCAGAGGTTCAGAAGATAGAATGAAAAGAAAATGAATTAATTTAAGTTTGAGGTGTAAATTTATGGGAACAGTGCTACTCTATATCGATAAACCATTAATGGTCGAAATATACTCAATCTAATGATAACTCATTGGATAATACACAATTACCGTCTTAAAAGTTGATGGTTTGATCCCACCCTACAATTTTTCAACTTAAAAAGAAAAAAAGGTTGAAAAAGCAATACGTTTTGTAAACTGAATTCAATCACTTCAGCAGGTTGGAAGTTGTTATTTTGTTGCATTCATCTTAATAATCCCTGGTACATGTACTGATCGTGTCTGAACTTTTTGCTACAGTAAATGTTATCCTTGTCCTTGAATGTCATTGTGATGTAACTATTTTCCTATTGAAGGTTTGGGATCGAGAAAAGGTCGTGATCATTCCTGACCATTACATATTCACCAGTGATGAACGTGCTAATCGCAATGTGGACATTCTGAGAGATTTCTCAAAAGAACAAAATATCAAGTACTTTTATGATATTAAGGATCTTAGCGATTTCAGGGTATGAAATTCTAGACTTATTTCTTTTTACTCTCATGTATCAATAATTGAACATATATAATGTTACCAGGTGAATCCAGATTACAAAGGTGTCTGTCATGTTGCGTTAGCTCAAGAAGGTCACTGCAGGCCCGGGGAGGTTATATTTCTTAGAGATGCTTATTTTTGCCTATGGTTTTTTCTTGTTTGTTTGTACTTTTATGTTAAATAGCATTTCTGGAATGCTTCATGTCTTCAGGTTCTGCTTGGTACAGACTCTCATACCTGTACAGCTGGTGCATTTGGTCAATTTGCTAGTGGAATTGGTAATACCGATGCAGGTTTTGTTCTGGGCACTGGGAAATCACTGCTCAAGGTCTTCCAAACTCTTAATTCTATCATTCTGTTTCTAGCATGGATGTTATTCAACCCTATTCATGTGCTCAAATTATGCTTGCTTCGGCTTATTGGTGCTTATTTGAGTAGATTTACATAAAGTAGTCTTGTTGTTTTGGGAATTCAAATGTGTTGAAAACCGTAAAATATATTCTTTTCAATTGAGAACAAGACATTATTTGAAAGGGATTAAAAAATATCTTTGACTTGATCGTGCTGTTCTACTTTTCCATTAAAGAGCACAATACACATTCAATGGGTACATTTGCTCTGGTCGTCTTTGTTGGTTGATATAATTTTTTTTTTTTGGAATAAGAAACCAATCAATTCATTTAGAAATTGAAGAGGAGCAGTACAAGAGACGAAAGGAAAAAGAAAAAAAAAGCCAAAGCTTACAAAACCAACAGAAAGGAAAAAACAAAACAAAGGAAAGTTTGCTAACAAAACAAAATGAGAAAGTTACAGTAAATGAAAAACTACAAGAAAGTTTTCCAATTTGCGAAGATCAGTTGTGTTGAATAACTGCCAAAAGCTTTGGTAGACAGCCCATAATGAAATGTTCATGCAAGCCAATTCACTTCTAGAGTACCACGGCTGATAAACCTATTGAAATATACGTTGATTTCTTTTCCACCTTAGTTCATAAAGAAGGCTTTTTAACTGAATTGGTTCATACAAAACTTGCCTTGTTTCGAAAACAAGGGCTAATAAGCAGCCGAGTGACGTTGGCCTTGACATTATACAAAAATGCCCATGAGAGACCAATTAAACTTAATAGAACTGACCAAAAAATTTCCAGAAAATGACAGTGAATATGTTGGTTGATATAATTAATTTGACCTCAACCTACCAGCTGAAAATTACTTTTGGGTTGATTGGTGAATGGTGATTTAACATAGTTCAACAGTTTTCAAAGTGTTAAGAAATAAATAAATGTACACTTTTTGGAGCATAAAACTATCGTCACTGGGAATTCTTTGTGACCGGTTGTTTTTTCACATCCTCTGTTCCTTGCATATCATCCACAGTCTGCACATACTTGCCTTTTATCCTTTGAAGACTTGCCATTTGTATTTGAAGGATTTTAATATGTCCCGGTAGTACATAATATTTGGTTTTTCTATTTTCTATTTGTAAATTGCAGGTTCCCCCAACTTTGAAATTTGTCATGGATGGAGAAATGCCCGATTATTTACTTGCAAAGGACTTGATTTTGCAGGTAAGTGTAGCCGTAATAAGATATTCATGTTTCTTTAAATGATTATGAGCCTAATTAATCAGATGCTAAAGTTTCCTTAAATATGTTCCAATATTTACCATCACATCTTGACTTGACATCTGGACATGAACATATTTAAACAGACCTGCACTTATAAGACAGTAATTTATAACTTATCATCTATACTTAGTTAAGGGTAATTTCTTTTCAATCTTTTAATAGGTATAAAAAATAGAAGTATCATTATGGATAGAGAAACCTTGATATCTTAGATTTACCAAATGTCAAAATTGTGAAGAATGCTGAAGCTTTTTTTTCTTTGTTAAGAAATCAAAACCATAAATTTAAGATTCATCTCTAAAGATACAGGACGCCTTCATTTATTTGGGGGCTAATTAATTAACGTACCCATTAGGTGTAATTTTGTTTGGGCAGTTAATTTTGTTTGGGGGCTAATTAATTAACGTACCCATTAGGTGTAAATAAATAAATATGTTCATAGAATCATCTATCTTTAAACATACCCATTAGGTGTAATTTTGTTAGATTGGAAACCCTTTGGTTGGTTGTCTCCCACTTTTGTTTGGGCAGTTTTTTTTGTATGTCTGTTTGTATTTTTCTTTATTTTTTTTTTCTCAAGGAAAGTTAGGTTCTTTATAAAAAAAAACACATACCTTCCAACAATTACTTGAATAAAAACCTTCATTTCCTTGATTTTTCATTTTTTTATTCATTTTTTTTTATGAATAATCAAACTTTCACTGAGAAGAAAATTAAATAATAAAAGGGTAGTACAAAGACGAGTGCCCATAAAAAAGAAAATGTTTTCAAAATGTCACTTTTGTATTTTTTTTGTTTGCTTTAGGTGACAAAAACAATGTATTTTTTCGTAGATATGTGGCTTCTAATAGAAGAAGAAACTCAATTGTTGAAATTCAAGATGTGATGGATAACAGTTTGGTGACTAATAAATGACAATGAGAAGAGCTTGAATTTATATCCTTTTACAAAAGATTATACTCTAAGAAGCAAAATTGGGAGCCACGGCCTCACATTGAGAATTGGAATCCTATCTCCCCCGAGCATAGATATGCTCTTGAAACAACGTTTACTGAAATTGATATTTTGAGGGTTGTTAACGACCTAGGAAGTAACAAGACTCCTGGACCTGATGGAATAACGACTGAATTTTTAAAAAAATCATGGAACATCCTTAAGGAAGACATAACGAGGATGTTTGACGATTTTTTTTGAAATGGAATCATCAATGCGAGTCTGAATGTGAGACATATATTGTCTCATCCCCAAGAAGAACATTGCTTCTGTTGTCTCTTATTATAGACCGATCAACCCCACCATTTATTTATATAAAGTGATTGCTAGAGTTTTGTCGGAACGCCTTAAGGTGATTTTTCCTTACACCATAAATGAGTACCAATCTGCTTTTGTTGCAAATCGACAGATTTTTATCCTATTCTTATTGCTAATGAGCTTATCGATGAATGGAATCGAAAGAAGAAGAAGAAGAAGAAGGGCATTGTTTTAAACCTCGATATTGAAAAAGGCTTTTGATATGGTGGATTGGGATTTTCTAATATGATCCAGGATCTAGATTATATCAAAAGATAAAAGAATAAAGATAAACCAAGTTTTGATAGGAACTTGGAACCTCTCTTCTCAAGAGAATCTCTTGAGCCCTACAATAAACCACTCAATTAATCACTCAATATTTGGATGCCTCAAACCTAGGCTAACCCTCTCTATTTATAATAAAATACCCTAACTTACTCTCCAAGTAATTGCAACTTACTCCCCAAGTAATTGCTAACATACCCTTATATTATTCCTATTTCTACTAAGACCCAACCTTATCACTACCGGCCCCTAAAAAAATACACCTTGTCCTCAAGGTATTGGTAAACAATAACTACGGAAAAAAAACAATTATGAGTTTTTTTTTTTTTTTTTTTGTGTGGCGATCTTGTGCGTCGGTCTTGTGACGAAACGGCGGCATCGGTGGCATCAGCGGTGGAAACGACGACGGTGGTGGTGGCGATGGCGGTAGCGGTGGTGGCGGCAGAGGTGGCAGCGGCGATGTCGGAGGTGGTGGCGGCGATGGTGGTGGTGGAGGTAGTGACGGCGGCAGCGGTGGTGGCGTCGGAGGTGGCGGCGACGATGTCGGTGGTGGTGGCGGCGGAGGTGGCGGTGTAAAAACCCTAGCCGTCACTTTTTCTTCCATAATAATTTCCTCTTTGAGCTCTCTAAGAGAACTATTTAGGTCAATGCAGCTCTCCCTCATTTTTCTGAGATCTTCTTTCATTGAAGCTACCTCTTCTCTGATTTTTTTAGAGAACCAACCGAGACCATCAAACTTAGCAATGCCTCTCGAAATAAACGAACCTCTTCCTGATCCATCTCTACAACCAAGAATCGAACGGCTCTAATACCAATTGATATGTTCCAGGATCTAGATTATATCAAAAGATAAAAGAATAAAGATAAACCAAGTTTTGATAGGAACTTGGAACCTCTCTTCTCAAGAGAATCTCTTGAGCCCTACAATAAATCACTCAATTAATCACTCAATATTTGGATGCCTCAAACCTAGGCTAACCCTCTCTATTTATAATAAAATACCCTAACTTACTCTCCAAGTAATTGCAACTTACCCCCAAGTAATTGCTAGCATACCCTTATATTATTCCTATTTCTACTAAGACCCAACCTTATCATTTTCTTGATAAGATTTTGAGGGCTAAAGGTTTTGGATTTGCTTGGAGAAGATGGGTTAGAGGATGCATCTCTTCCATAAATTTCTCTATCATTATAAACGACAAGCCCCGAGGGAAGTTCTTTGCTTCTAGAGGCTTAAGGCAGGGAGGCCCTCTCTCCCCTTTCCTCTTTATTCTTAGTATGGATTGTCTCAGCCTCCGATTGAAATTTGCTGAAAATGTTGGCGTGAATGAAGGGTTCAAGTTTGTACGGGGCCTGATGTTCATATTACCCATCTATAGTTTGCTGATGACACCTTATTGTTTTCCACTTTGAAGAAAGACTCTTTAAAAATGCCATTGAAAATTGTGGAGAATTTCAAACAGACATTGGGGCTAGACATTAACTCTAAAAAATTTGTTTTCGCATTGACCAAGCTGAAGTGAATGTCATTGCTGTTCCTTATGGTTTTAAGATGGAATCTTGACCCTCCATATATTTGGTCCTCCCTCTCAATGGAAACCCAAAATCGATGGGTTTGTGGGTCCTTGTCATCGACAAAATTGAAAGGAGATTGTATTCATGGGGATCTACTAATATATCAAAAGGAGGTCATCGAAAAAAATTGAAAGGAGATCATATTCATGGGGATCTACTAATATATCAAAAGTAGGTTGACCGACTCTCATCAATGCCACTCTCTCCAACATTCCTATATACTATTTGCCCCTCTTCTTTGCTCCGAAAAATGTGACACATATCATTGAAAAACTTATGAGAGATTTCTTATGGAGGGGAAAGGGTGGATCTAAAGCTGGTCACTTGCTTAAATGGGATTTGGTTAAAATTCCAATCGAAAATGGTGGTTTGGGCATCATTGATCTTCACTGCAAGAATATTGCATTGTTAGCCAAATGGCATTGGAGGTTCTACATTGAAAAAGAGGCTCTTTGGAGGAAGTGTATTGGTGCCAGATATGGTTATTCATGGCATTAGGTGTTCGATGGCCCTCGGAGACAAATCGACAAATGGAAGCATTTGATTTACAACAATGTCTCTCTCAGAGAATTGGTGCGGGCATAAGCACTAAATTTTGGATTGACAGATGGGCTGGGCATGAATTGAGAACTACCTATTCTTCACTGTTTTCCTTATCAAGGAACAACGATGCTCACATTGCTGATTTATGGAATTTTGCTACAATGGGATGGGATCTCAATTTGAGGAGGAATCCGAAAGATGAAGAAATAATTGAGTGGGCCTCATTGTAAAATCTGCTTGATTCTCATATCCCTGGACAGAGTCAAGATCGTTGGATATGGCCACCAGAGAAAACTGATTTGTTTTCTTCTAGATCGCTAACTTCCCACTTTGCCCCATCTCCAGATCCTATTAAGAAGAAATTCTTTACCATTCTCTGGAAGGGCCCTCAACCTAAAAAAGTTTTAAAAAATTTGCTGAACTTAGCCATGGCATTCTTAATACCAATGACAAACTTCAACGCAGATGCCCGGGTATAATGATCTTTCCTCATTGCTGCATCCTTTGTGTTAAAGACATGGAATCCCAGTATCACTTATTCAAAGAATGCTCGGTTGCTAACTATATATGGAACTATCTTACTAGCACTTTCTCATGGAAAATGTCATCTCCCAACGACATTCAGGATCTTCTATTCTATGCTTTTACAGGATACCCATTTAAACGAGAGAAAAAAGCTCTATGGAGAATTTTCCTATCGGCATTTTTGTGGACTTTTTGGCAAGTCCAGAATGATTTGGTCTTCACATAGGAAAATCCTTTGAAAGGAAATATTTTGGAATCTATCACTGTTTTTGCTATTACATGGGCTCATAACATTCTTGCGTTTAAAGATTATAGTCTTTCTTCTCTATTACATCATTGGAGCAATTTTTTGTAAAGTTATGATTCTCTTTGGGTAACTTTTCATTCATCAATGAAAGTTCACCGTTTCCTATAAAAAAAATGTAGTTTTTTTTTTGCGTGTCTTGTAGCCTTTTTGCTTTTCATATTAATTTTTTTAATAAACATTTTTCGTGTTGCACTTTTAATTAAACCTTCTTTTTGCACATTGCAGATTATTGGTGAAATATCAGTATCAGGTGCAACATATAAAGCCATGGAATTTCTCGGCACAACCGTTGAAAGTTTAACGGTGAGAACTCTACTAAGATTTTGGATGTTACTTGTCACTAATCTTACTCATATGTATATATTTTATGATCATTTGCCCTTTGGCAATTAGATGGTAGTAAAAAATAATTTGATCGCTTGGGTCCTTTTTTCTGGTAGATGGAAGAAAGAATGACACTGTGCAACATGGTTGTTGAAGCTGGAGGAAAGAATGGAGTTATTCCTCCTGATAGTACTACGTTCAAGTACCTTGAGGTTAGTCCAGAGGGGCATTAAAGTTTATTGAAATAATTTTGTCTATTTCGCATGTTTGCAACATTCAAGTGCCTTGTGGTGAGTACAAAAGGGACATTTAAGTTATTAGAACAGTTCAATTCCTCTTTTTTAGCATGTTTCATGCCTGCTTTTCAATTAATAGTAAAGTGATACATTGAAGCATCAATGAGGCCAACATTACTCATATGATTTTAATTGCAGTAGTCTTTCAATATGTTATCTTTATTAGATGAATGATGGATATGGCCAGGCCAGGGATGCATGCCATTTACATTGATTTTGAAGTAGTTTTAAGTCTCTCTAGGTTATTTAATCAATTATATCCCTCAGTTAAGTATGTTTTCTCGTCTCCTTGGAAGAAAGGAACAAGCTTGAAATGATACATTAAAGTGTCACCAGTTTTGGTAGGTCATAGGATGTTTTTATCAGTTGTTTCAATTTTTTTTTCATTTTTAGTTTAAATATTGATTATCTGTAAAGTTTATTGGGATTATTCTATTGCGTGTTTTGGACAGGATAAGACATCCAAACCCTTTGAACCAGTTTACAGTGACGAGAACGCAAGGTATTTTTTTTTAATTAAAATAAAACTTCATAGAGGAAATCTTAAACTTCATCTATTTGCCAAAAACAATCATGGCTGATTTTATGATGGAATCTTTACTGTTTAGGAATATTAGAATTCTTACAATTTAGGAATAATTGTCATAATTGTATTTATCATATTTATTCTTTTACATTGTTGTAATGTTTCCTTAATTGTAAAAGGCCTCTCTCCTGTATAAGAAGACCTAGTGGGAGTATATTTTAACAAGCAATACATGATAATTGCTCTCAAAACTAAGATGGTATCAGAGCAGAAGGTCTCGAGTTCGAGTCCATGCCTAGTCTTTTCCTCCCCATTTAAAATTAAATTCCACTTGTAGGGCATTTTTCAAATTTCAAAGCCCACAAGTGACGGAGAGTGTTAGTTGATATAATTAAATTTACCCTAGTTCATCAACTTAAGCTTTTTGGTTGATTGATGATTTAACATAATTGGACATTTTAGAAAGTATAAATTGCGCCCTTTCTGGTTGATGAGAAAAAAAGAGATTACTTCAGCTCTCAATCCCTTACGGGGAGGCGGCATGGTGGATGCGCTTCTGAATTCCTTATTCAAACATTAGGTTACGCTGTTTTTCTTTCACTCTTTGTCTCTACAGAAACAATGAAGTTTTCCAGTGTTAGGGCAAACCTGGTCAACAGTTATTGAGGTAGCTAAATATTGTCTTTTGGGTTTAATGAATCCTTCCTTCATTAACTATTCTCACCCGCTATAATTAATGATCGGTGCCTGGTGGGTGAGTTACTTTAAGTTGCTTAGGAAAATATTTGCTTCTGTTTGGTTGGTATAGTTTCATCTTTTCAACTTTTAATTGAAACCACTAAAAATCTCTTGTTTCTTAAAACATGATATTGGGTAGAATTCAATGGTGACTTTTTGTTTTGTCTTTTTTTCCCTATTAAGTGTTCTCTCTCTCTCTTTTTTTATAATTATAAAAAAATGGTTTAATTAAAAAATAGTTATGATCTATGAATATTTCTTTATAAATTGCCACTTTAGAATTAGTTCTATTAATTTCTCTACTTATTTTTTACTTGTTCAGTCAATATTTGTTTGCCTTTTAGGCTCATTGTTATTCTTGTTGATTAGTATATTTTGTTGGGTTTAGATTTCTATCAGAATACAGATTTGATGTATCGAAACTGGAGCCTGTCGTAGCTAAGGTTAGCATTCTAGAATTTCCTTCTTTTTTTGAGTTCAAATCATTTTGGGGTGGGGGTTTCGAATCTGTAACCTCTTGGTTACTAGGTTGTACATAATATCGCTAGAGCTTTGTTCCTTTTGGTAGATTTTCCTGATTTGTACAGTTTCTGCCAATGTTCACCTGTTTCTTTTCCTAAATTTTGTCATTTTTTTTGTTGAAAACTTCAGCCCCATTCTCCAGATAACCGTGCTTTGGCAAGGGAATGTAAAGATGTGAAAATTGATAGAGTATATGTTGGATCTTGTACGGGTGGAAAGACGGAGGATTTTCTGGCCTTGGCTAAAGTTTTTCTTGCCGCAGTATTAATCTTCATCTCTTTTACTTGTGAATGTTATTATATCATATATCCACATCACATGCTTCTAACTGCCCTCAATTTATGTCGCAATATATTTTTCAAAACAAAAAAAAATTTGTTTTTATTCCTTTCCAGTGGTGTCTGATTTTTTAAAAAACAATGTCACTCATCTTTTCTGTTGATGTGATTGATGTAAGCATGATTGACCGTTTATTTTCTTAAACAATGTCTCACCGTACTATTGATTTATGCATTGAAAATTTAGAGATGTCCATGAGATTTCCATCGACCCTTATCCTCGCTGCTCTTTGCCTATTTATATTTCATTTTTCATATTTTAGCATCTGGATATTTTTTTGGGAGGCTTATAATATAAGGTACATCTTATTTGCAGGGAAAGAAGGTTAAAGTTCCTACATTTATCGTCCCTGCCACTCAAAAGGTTTAGAACTGTTTACAATTCGGTGTTGAAATGCAATTTTGCTCACAGGATTTTATTGCCTTTATTTTAATTTATTTTTCCCAAAAATGAATAGGTCTGGATAGACTTATATAGCATACCAGTTCCTGGAGCTGGTGGGAAAACTTGCTCTCAGATATTTGAGGAAGCTGGCTGTGATACACCAGCAAGTCCTGGTTGTGCTGCTTGTTTAGGTGGCCCTAAGGATACTTATGCACGAATGAACGAAGCACAGGTAAATCATAATTTTCCTGCAGTTCATTTTTAGAATAGGATTAAAAATGGTTCGAGACTCAGCTGTGACATTACTCCTTCGATGTCTCTCGGTGTCTGACCTAGGGATGGGCGTAGTTACTCTTGTTTCAAAAAAATAAAAAAAAGAATAGGATAAAAAATAAAAAAATTGTCGATGTCTTTACAGAATAAGACTAAAATAAGGAAAACATTGACTTGTTAGTTTATTATTCACTTAGGTGGATCTCTGTTATTGAATTCTTGCTATCGGTCCCTACCTGCAATTTTTTACGATGTAGTAATTGGTGATGAAGTAAATTTTCAGCTATAGTTAATTACACACTACATGCAAAAGTTGTAGCCAAATTGAGTGAAATTGTTTCTTCTAAAAAAAAAAGTTCTAGCCAAATTGATCTACAAGACTTGTTTTAAATTTTTTAAAAATTATGGTTTCAAATTTTGGTTCCGTTGGTTAACCATTTGGTTTTTTATTTTTAGTTTTTGATAACTATTATTATTTCGATATCTTTTTACTTAAATTTTTAAAAATCAAACCAAAATTTGAAAGTTAAAAAAAATAGTTTTCAAATATTTGTTTTGGTTTATAGAATTTATTTAGGATTCACCTGAGAAAAAATGATAAATACGCAGAGAATTTGAGTAGTAAATACAAACTTAAATTTCAAAACAAAAAACTAATGTCTGACATCTTTAACACTTTCGACTTTTATTACTATCCTCTCCTTTTGTTTAAGCCATCATTAAAATTATCTTAATGGTCATCTGGCTATCTTATCAATTATTGTGGTCACAAGAGTGGAGCCAGAGTTTTCTTTCAGATGTCTATGGGTCTGGGCTCGCGTGGTGAGATTTAGAGATAGTGTTGTTTAATGCTTCCTTGTGGACTTTTTTGGCCAAACATTTAGCAATATTTCTGTAGTCTTCTTCAATTCACAATGCCAACTTAAGCATATACTAAAAACTAAGAATTAGAAACTTTTCCCACAGATTTCAAGGTCGAATCACCTCACCTTCGAATGTAGCATATAATTTTCCTCTCTACCATCATGGAGTGATCTAATGGTCAAGAGAGACCTTGGGGAAGAAGTCTTGTTCAATTCGACTGACATCTTACCTCGGAATTAGTTTCTTACGGGTTCTTTTGACTTTCAAATGTTATAGCGTCAGGTGGTATGTCGCGTGACAATAGTCGAGGTACTCGCAAGCTTGTTTCGACAGTCACAGATATATATATGTAAAAAAAGATTATTTCTCTTTAACATCCAAATGTTGTAGGGTCATGTTTTATGTCCTTCGAGAATAGTCAAAGTGCGTGTAAGCTGTTCTGAGTACTCGTGGATTTTTTTAAAAAGAAATTGTGTGCTAAACCTAAACATATGGATTATCTCATGCCATGAATGTGAAATAACATTGGGGAGGGTTATTTTTTTATTGCAGGTTTGTGTTTCAACAACAAACAGGAACTTCCCTGGTAGAATGGGACACAAGGAAGGACAGATTTACCTTGCTTCTCCATATACGGCTGCAGCCTCTGCCTTGACTGGATATGTGACTGACCCAAGAGAGTTCTTGCAGTAATTCCCGTCGAATTCGTGATCAACATATTGTATGTTTTAATTTATTATCTAAATCCAAATAAGGTTTCGTCGCGTCATGTTTGTATCGGCCTGCTTCGAGCTTGCTTACCCAGTAGATCGTCATGTTTATGTCAAGTTTAATGAGATTTTGCGGTTGATAAGTACTTAGGTGTATTAGGGTTTGAATTTGACGATGAATTTACTTTTAAATTAATGTTTAAACTAGTTTAACACGCTATATATGCGTTATTATTTAAAAGAAAACTGGAATGTTGCTACTGAAATTGTAGAAATCATTTGGGATTTATCATCCTACATGTTTTATATGGATAAATAGCGATCAAACAAGAAATAATGGAATCATA

mRNA sequence

CAGAAATCCGAAACGCGCGGCTGTGAAGTTTGCTTCCAAACAGCCCTATTAAGGCTCGTTCACAACTTGCGAGATACTGAAAGCCGCCTTCACCATATCTTCCAATCGCCTCTCTTTCACTGGCGAGAAGAAATCCCTTTTCTTCATCCTCTTGATTAGCAGCTCAAGCTTTGCTTCCATGGCTACTTCCACCGCCGCCTTGGCATCCACGCCGTTCCTGACCAACAAGAAGGATTCGGATCTCACTGCTTTTTCTTCGTCGTTGCCGTTTTCGTTTCGGAGATGCGAGAGGACTGTATCGAAGAAAATATGCTCGGTCATGGCACCGCAGCAATCGGAACGCAAGCCTAGCGCCACCGGCTCGGTTAAAACTGCCATGACTATGACGGAGAAGATATTTGCTAAAGCTTCTCAAAAAACTCAGTTGAGCCCTGGTGAAAATGTTTGGGTTAATGTGGACGTTTTGATGACTCATGATGTTTGCGGTCCTGGTTCGATTGGAGTTTTTAAAAAGGAGTTTGGAGAGAATGCCAAGGTTTGGGATCGAGAAAAGGTCGTGATCATTCCTGACCATTACATATTCACCAGTGATGAACGTGCTAATCGCAATGTGGACATTCTGAGAGATTTCTCAAAAGAACAAAATATCAAGTACTTTTATGATATTAAGGATCTTAGCGATTTCAGGGTGAATCCAGATTACAAAGGTGTCTGTCATGTTGCGTTAGCTCAAGAAGGTCACTGCAGGCCCGGGGAGGTTCTGCTTGGTACAGACTCTCATACCTGTACAGCTGGTGCATTTGGTCAATTTGCTAGTGGAATTGGTAATACCGATGCAGGTTTTGTTCTGGGCACTGGGAAATCACTGCTCAAGGTTCCCCCAACTTTGAAATTTGTCATGGATGGAGAAATGCCCGATTATTTACTTGCAAAGGACTTGATTTTGCAGATTATTGGTGAAATATCAGTATCAGGTGCAACATATAAAGCCATGGAATTTCTCGGCACAACCGTTGAAAGTTTAACGATGGAAGAAAGAATGACACTGTGCAACATGGTTGTTGAAGCTGGAGGAAAGAATGGAGTTATTCCTCCTGATAGTACTACGTTCAAGTACCTTGAGGATAAGACATCCAAACCCTTTGAACCAGTTTACAGTGACGAGAACGCAAGATTTCTATCAGAATACAGATTTGATGTATCGAAACTGGAGCCTGTCGTAGCTAAGCCCCATTCTCCAGATAACCGTGCTTTGGCAAGGGAATGTAAAGATGTGAAAATTGATAGAGTATATGTTGGATCTTGTACGGGTGGAAAGACGGAGGATTTTCTGGCCTTGGCTAAAGTTTTTCTTGCCGCAGGAAAGAAGGTTAAAGTTCCTACATTTATCGTCCCTGCCACTCAAAAGGTCTGGATAGACTTATATAGCATACCAGTTCCTGGAGCTGGTGGGAAAACTTGCTCTCAGATATTTGAGGAAGCTGGCTGTGATACACCAGCAAGTCCTGGTTGTGCTGCTTGTTTAGGTGGCCCTAAGGATACTTATGCACGAATGAACGAAGCACAGATTTCAAGGTCGAATCACCTCACCTTCGAATGTAGCATATAATTTTCCTCTCTACCATCATGGAGTGATCTAATGGTCAAGAGAGACCTTGGGGAAGAAGTCTTGTTCAATTCGACTGACATCTTACCTCGGAATTAGTTTCTTACGGGTTCTTTTGACTTTCAAATGTTATAGCGTCAGGTGGTATGTCGCGTGACAATAGTCGAGGTACTCGCAAGCTTGTTTCGACAGTCACAGATATATATATGTAAAAAAAGATTATTTCTCTTTAACATCCAAATGTTGTAGGGTCATGTTTTATGTCCTTCGAGAATAGTCAAAGTGCGTGTAAGCTGTTCTGAGTACTCGTGGATTTTTTTAAAAAGAAATTGTGTGCTAAACCTAAACATATGGATTATCTCATGCCATGAATGTGAAATAACATTGGGGAGGGTTATTTTTTTATTGCAGGTTTGTGTTTCAACAACAAACAGGAACTTCCCTGGTAGAATGGGACACAAGGAAGGACAGATTTACCTTGCTTCTCCATATACGGCTGCAGCCTCTGCCTTGACTGGATATGTGACTGACCCAAGAGAGTTCTTGCAGTAATTCCCGTCGAATTCGTGATCAACATATTGTATGTTTTAATTTATTATCTAAATCCAAATAAGGTTTCGTCGCGTCATGTTTGTATCGGCCTGCTTCGAGCTTGCTTACCCAGTAGATCGTCATGTTTATGTCAAGTTTAATGAGATTTTGCGGTTGATAAGTACTTAGGTGTATTAGGGTTTGAATTTGACGATGAATTTACTTTTAAATTAATGTTTAAACTAGTTTAACACGCTATATATGCGTTATTATTTAAAAGAAAACTGGAATGTTGCTACTGAAATTGTAGAAATCATTTGGGATTTATCATCCTACATGTTTTATATGGATAAATAGCGATCAAACAAGAAATAATGGAATCATA

Coding sequence (CDS)

ATGGCTACTTCCACCGCCGCCTTGGCATCCACGCCGTTCCTGACCAACAAGAAGGATTCGGATCTCACTGCTTTTTCTTCGTCGTTGCCGTTTTCGTTTCGGAGATGCGAGAGGACTGTATCGAAGAAAATATGCTCGGTCATGGCACCGCAGCAATCGGAACGCAAGCCTAGCGCCACCGGCTCGGTTAAAACTGCCATGACTATGACGGAGAAGATATTTGCTAAAGCTTCTCAAAAAACTCAGTTGAGCCCTGGTGAAAATGTTTGGGTTAATGTGGACGTTTTGATGACTCATGATGTTTGCGGTCCTGGTTCGATTGGAGTTTTTAAAAAGGAGTTTGGAGAGAATGCCAAGGTTTGGGATCGAGAAAAGGTCGTGATCATTCCTGACCATTACATATTCACCAGTGATGAACGTGCTAATCGCAATGTGGACATTCTGAGAGATTTCTCAAAAGAACAAAATATCAAGTACTTTTATGATATTAAGGATCTTAGCGATTTCAGGGTGAATCCAGATTACAAAGGTGTCTGTCATGTTGCGTTAGCTCAAGAAGGTCACTGCAGGCCCGGGGAGGTTCTGCTTGGTACAGACTCTCATACCTGTACAGCTGGTGCATTTGGTCAATTTGCTAGTGGAATTGGTAATACCGATGCAGGTTTTGTTCTGGGCACTGGGAAATCACTGCTCAAGGTTCCCCCAACTTTGAAATTTGTCATGGATGGAGAAATGCCCGATTATTTACTTGCAAAGGACTTGATTTTGCAGATTATTGGTGAAATATCAGTATCAGGTGCAACATATAAAGCCATGGAATTTCTCGGCACAACCGTTGAAAGTTTAACGATGGAAGAAAGAATGACACTGTGCAACATGGTTGTTGAAGCTGGAGGAAAGAATGGAGTTATTCCTCCTGATAGTACTACGTTCAAGTACCTTGAGGATAAGACATCCAAACCCTTTGAACCAGTTTACAGTGACGAGAACGCAAGATTTCTATCAGAATACAGATTTGATGTATCGAAACTGGAGCCTGTCGTAGCTAAGCCCCATTCTCCAGATAACCGTGCTTTGGCAAGGGAATGTAAAGATGTGAAAATTGATAGAGTATATGTTGGATCTTGTACGGGTGGAAAGACGGAGGATTTTCTGGCCTTGGCTAAAGTTTTTCTTGCCGCAGGAAAGAAGGTTAAAGTTCCTACATTTATCGTCCCTGCCACTCAAAAGGTCTGGATAGACTTATATAGCATACCAGTTCCTGGAGCTGGTGGGAAAACTTGCTCTCAGATATTTGAGGAAGCTGGCTGTGATACACCAGCAAGTCCTGGTTGTGCTGCTTGTTTAGGTGGCCCTAAGGATACTTATGCACGAATGAACGAAGCACAGATTTCAAGGTCGAATCACCTCACCTTCGAATGTAGCATATAA

Protein sequence

MATSTAALASTPFLTNKKDSDLTAFSSSLPFSFRRCERTVSKKICSVMAPQQSERKPSATGSVKTAMTMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIGVFKKEFGENAKVWDREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLKFVMDGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGKNGVIPPDSTTFKYLEDKTSKPFEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALARECKDVKIDRVYVGSCTGGKTEDFLALAKVFLAAGKKVKVPTFIVPATQKVWIDLYSIPVPGAGGKTCSQIFEEAGCDTPASPGCAACLGGPKDTYARMNEAQISRSNHLTFECSI

Homology

[Close]

BLAST of Sed0016595.2 vs. NCBI nr
Match: XP_022963044.1 (3-isopropylmalate dehydratase large subunit, chloroplastic [Cucurbita moschata] >XP_023517927.1 3-isopropylmalate dehydratase large subunit, chloroplastic [Cucurbita pepo subsp. pepo] >KAG7027191.1 3-isopropylmalate dehydratase large subunit, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 906.0 bits (2340), Expect = 1.4e-259
Identity = 448/464 (96.55%), Postives = 457/464 (98.49%), Query Frame = 0


Query: 1   MATSTAALASTPFLTNKKDSDLTAFSSSLPFSFRRCERTVSKKICSVMAPQQSERKPSAT 60
           MA STAAL ST FL+NKKDSDL AFSSSLPFSFRRCERTVSKKICSVMAPQQSERKPSAT
Sbjct: 1   MAASTAALTSTSFLSNKKDSDLAAFSSSLPFSFRRCERTVSKKICSVMAPQQSERKPSAT 60

Query: 61  GSVKTAMTMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIGVFKKEFGENAKV 120
           GSVKTAMTMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIG+FKKEFGE+AKV
Sbjct: 61  GSVKTAMTMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIGIFKKEFGEDAKV 120

Query: 121 WDREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCH 180
           WDREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCH
Sbjct: 121 WDREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCH 180

Query: 181 VALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLKFV 240
           VALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTL+FV
Sbjct: 181 VALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLRFV 240

Query: 241 MDGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGK 300
           MDGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGK
Sbjct: 241 MDGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGK 300

Query: 301 NGVIPPDSTTFKYLEDKTSKPFEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALA 360
           NGVIPPDSTTFKYLE KTSK +EPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALA
Sbjct: 301 NGVIPPDSTTFKYLEGKTSKAYEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALA 360

Query: 361 RECKDVKIDRVYVGSCTGGKTEDFLALAKVFLAAGKKVKVPTFIVPATQKVWIDLYSIPV 420
           RECKDVKIDRVYVGSCTGGKTEDFLALAKVFLAAG+KVKVPTFIVPATQKVW+DLYSIPV
Sbjct: 361 RECKDVKIDRVYVGSCTGGKTEDFLALAKVFLAAGRKVKVPTFIVPATQKVWMDLYSIPV 420

Query: 421 PGAGGKTCSQIFEEAGCDTPASPGCAACLGGPKDTYARMNEAQI 465
           PGAGGKTCSQIFEEAGCDTPASPGCAACLGGP+DTYARMNE Q+
Sbjct: 421 PGAGGKTCSQIFEEAGCDTPASPGCAACLGGPRDTYARMNEPQV 464

[Close]

BLAST of Sed0016595.2 vs. NCBI nr
Match: XP_022972644.1 (3-isopropylmalate dehydratase large subunit, chloroplastic [Cucurbita maxima])

HSP 1 Score: 905.6 bits (2339), Expect = 1.8e-259
Identity = 447/464 (96.34%), Postives = 457/464 (98.49%), Query Frame = 0


Query: 1   MATSTAALASTPFLTNKKDSDLTAFSSSLPFSFRRCERTVSKKICSVMAPQQSERKPSAT 60
           MA STAAL ST FL+NKKDSDL AFSSSLPFSFRRCERTVSKKICSVMAPQQSERKPSAT
Sbjct: 1   MAASTAALTSTSFLSNKKDSDLAAFSSSLPFSFRRCERTVSKKICSVMAPQQSERKPSAT 60

Query: 61  GSVKTAMTMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIGVFKKEFGENAKV 120
           GSVKTAMTMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIG+FKKEFGE+AK+
Sbjct: 61  GSVKTAMTMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIGIFKKEFGEDAKI 120

Query: 121 WDREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCH 180
           WDREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCH
Sbjct: 121 WDREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCH 180

Query: 181 VALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLKFV 240
           VALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTL+FV
Sbjct: 181 VALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLRFV 240

Query: 241 MDGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGK 300
           MDGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGK
Sbjct: 241 MDGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGK 300

Query: 301 NGVIPPDSTTFKYLEDKTSKPFEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALA 360
           NGVIPPDSTTFKYLE KTSK +EPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALA
Sbjct: 301 NGVIPPDSTTFKYLEGKTSKAYEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALA 360

Query: 361 RECKDVKIDRVYVGSCTGGKTEDFLALAKVFLAAGKKVKVPTFIVPATQKVWIDLYSIPV 420
           RECKDVKIDRVYVGSCTGGKTEDFLALAKVFLAAG+KVKVPTFIVPATQKVW+DLYSIPV
Sbjct: 361 RECKDVKIDRVYVGSCTGGKTEDFLALAKVFLAAGRKVKVPTFIVPATQKVWMDLYSIPV 420

Query: 421 PGAGGKTCSQIFEEAGCDTPASPGCAACLGGPKDTYARMNEAQI 465
           PGAGGKTCSQIFEEAGCDTPASPGCAACLGGP+DTYARMNE Q+
Sbjct: 421 PGAGGKTCSQIFEEAGCDTPASPGCAACLGGPRDTYARMNEPQV 464

[Close]

BLAST of Sed0016595.2 vs. NCBI nr
Match: XP_008465910.1 (PREDICTED: 3-isopropylmalate dehydratase large subunit [Cucumis melo] >KAA0038519.1 3-isopropylmalate dehydratase large subunit [Cucumis melo var. makuwa] >TYK31113.1 3-isopropylmalate dehydratase large subunit [Cucumis melo var. makuwa])

HSP 1 Score: 897.1 bits (2317), Expect = 6.5e-257
Identity = 440/463 (95.03%), Postives = 455/463 (98.27%), Query Frame = 0


Query: 2   ATSTAALASTPFLTNKKDSDLTAFSSSLPFSFRRCERTVSKKICSVMAPQQSERKPSATG 61
           A++ AAL ST FL+NKKD D+ AFSSSLPFS+RRCERTVSKKICSVM PQQSERKPSATG
Sbjct: 3   ASTAAALTSTAFLSNKKDLDVAAFSSSLPFSYRRCERTVSKKICSVMTPQQSERKPSATG 62

Query: 62  SVKTAMTMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIGVFKKEFGENAKVW 121
           SVKTAMTMTEKIFAKASQKT+LSPGENVWV+VDVLMTHDVCGPGSIG+FKKEFGENAKVW
Sbjct: 63  SVKTAMTMTEKIFAKASQKTELSPGENVWVDVDVLMTHDVCGPGSIGIFKKEFGENAKVW 122

Query: 122 DREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCHV 181
           DREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCHV
Sbjct: 123 DREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCHV 182

Query: 182 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLKFVM 241
           ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTL+FVM
Sbjct: 183 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLRFVM 242

Query: 242 DGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGKN 301
           DGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTT+ESL MEERMTLCNMVVEAGGKN
Sbjct: 243 DGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTTIESLNMEERMTLCNMVVEAGGKN 302

Query: 302 GVIPPDSTTFKYLEDKTSKPFEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALAR 361
           GVIPPDSTTFKYLEDKT+KPFEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALAR
Sbjct: 303 GVIPPDSTTFKYLEDKTTKPFEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALAR 362

Query: 362 ECKDVKIDRVYVGSCTGGKTEDFLALAKVFLAAGKKVKVPTFIVPATQKVWIDLYSIPVP 421
           ECKDVKIDRVYVGSCTGGKTEDFLALAKVF+AAGKKVKVPTFIVPATQKVW+DLYSIPVP
Sbjct: 363 ECKDVKIDRVYVGSCTGGKTEDFLALAKVFVAAGKKVKVPTFIVPATQKVWMDLYSIPVP 422

Query: 422 GAGGKTCSQIFEEAGCDTPASPGCAACLGGPKDTYARMNEAQI 465
           GAGGKTCSQIFEEAGCDTPASPGCAACLGGP+DTYARMNE Q+
Sbjct: 423 GAGGKTCSQIFEEAGCDTPASPGCAACLGGPRDTYARMNEPQV 465

[Close]

BLAST of Sed0016595.2 vs. NCBI nr
Match: XP_004148369.1 (3-isopropylmalate dehydratase large subunit, chloroplastic [Cucumis sativus] >KGN60450.1 hypothetical protein Csa_002246 [Cucumis sativus])

HSP 1 Score: 896.0 bits (2314), Expect = 1.4e-256
Identity = 439/463 (94.82%), Postives = 455/463 (98.27%), Query Frame = 0


Query: 2   ATSTAALASTPFLTNKKDSDLTAFSSSLPFSFRRCERTVSKKICSVMAPQQSERKPSATG 61
           A++ AAL ST FLTNKKD D+ AFSSSLPFS+RRCERTVSKKICSVM PQQSERKPSA+G
Sbjct: 3   ASTAAALTSTAFLTNKKDLDVAAFSSSLPFSYRRCERTVSKKICSVMTPQQSERKPSASG 62

Query: 62  SVKTAMTMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIGVFKKEFGENAKVW 121
           SVKTAMTMTEKIFAKASQKT+LSPGENVWV+VDVLMTHDVCGPGSIG+FKKEFGENAKVW
Sbjct: 63  SVKTAMTMTEKIFAKASQKTELSPGENVWVDVDVLMTHDVCGPGSIGIFKKEFGENAKVW 122

Query: 122 DREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCHV 181
           DREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCHV
Sbjct: 123 DREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCHV 182

Query: 182 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLKFVM 241
           ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGF+LGTGKSLLKVPPTL+FVM
Sbjct: 183 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFILGTGKSLLKVPPTLRFVM 242

Query: 242 DGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGKN 301
           DGEMPDYLLAKDLILQIIGEISVSGATYKAMEF+GTT+ESLTMEERMTLCNMVVEAGGKN
Sbjct: 243 DGEMPDYLLAKDLILQIIGEISVSGATYKAMEFIGTTIESLTMEERMTLCNMVVEAGGKN 302

Query: 302 GVIPPDSTTFKYLEDKTSKPFEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALAR 361
           GVIPPDSTTFKYLEDKT+KPFEPVYSD NARFLSEYRFDVSKLEPVVAKPHSPDNRALAR
Sbjct: 303 GVIPPDSTTFKYLEDKTTKPFEPVYSDANARFLSEYRFDVSKLEPVVAKPHSPDNRALAR 362

Query: 362 ECKDVKIDRVYVGSCTGGKTEDFLALAKVFLAAGKKVKVPTFIVPATQKVWIDLYSIPVP 421
           ECKDVKIDRVYVGSCTGGKTEDFLALAKVF AAGKKVKVPTFIVPATQKVW+DLYSIPVP
Sbjct: 363 ECKDVKIDRVYVGSCTGGKTEDFLALAKVFHAAGKKVKVPTFIVPATQKVWMDLYSIPVP 422

Query: 422 GAGGKTCSQIFEEAGCDTPASPGCAACLGGPKDTYARMNEAQI 465
           GAGGKTCSQIFEEAGCDTPASPGCAACLGGP+DTYARMNEAQ+
Sbjct: 423 GAGGKTCSQIFEEAGCDTPASPGCAACLGGPRDTYARMNEAQV 465

[Close]

BLAST of Sed0016595.2 vs. NCBI nr
Match: XP_022132847.1 (3-isopropylmalate dehydratase large subunit, chloroplastic [Momordica charantia])

HSP 1 Score: 888.3 bits (2294), Expect = 3.0e-254
Identity = 437/464 (94.18%), Postives = 451/464 (97.20%), Query Frame = 0


Query: 1   MATSTAALASTPFLTNKKDSDLTAFSSSLPFSFRRCERTVSKKICSVMAPQQSERKPSAT 60
           MA STAAL STP L+NKKD DL AFS SLPFSFRRCERTVSKKICSVM PQQSERKPSA+
Sbjct: 1   MAASTAALTSTPLLSNKKDVDLAAFSPSLPFSFRRCERTVSKKICSVMTPQQSERKPSAS 60

Query: 61  GSVKTAMTMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIGVFKKEFGENAKV 120
           GSVKTAMTMTEKIFAKAS+K+QLSPGENVWVNVDVLMTHDVCGPGSIG+FKKEFGENAKV
Sbjct: 61  GSVKTAMTMTEKIFAKASEKSQLSPGENVWVNVDVLMTHDVCGPGSIGIFKKEFGENAKV 120

Query: 121 WDREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCH 180
           WDREKVVIIPDHYIFTSDERANRNVDILRDFS EQNIKYFYDIKDLS+F+VNPDYKGVCH
Sbjct: 121 WDREKVVIIPDHYIFTSDERANRNVDILRDFSLEQNIKYFYDIKDLSNFKVNPDYKGVCH 180

Query: 181 VALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLKFV 240
           VALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTL+FV
Sbjct: 181 VALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLRFV 240

Query: 241 MDGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGK 300
           MDGEMPDYLLAKDLILQIIGEISVSGATYKAMEF+GTT+ESLTMEERMTLCNMVVEAGGK
Sbjct: 241 MDGEMPDYLLAKDLILQIIGEISVSGATYKAMEFVGTTIESLTMEERMTLCNMVVEAGGK 300

Query: 301 NGVIPPDSTTFKYLEDKTSKPFEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALA 360
           NGVIPPDSTTFKYLEDKTSK +EPVYSD NARFLSEYRFDVSKLEPVVAKPHSPDNRALA
Sbjct: 301 NGVIPPDSTTFKYLEDKTSKAYEPVYSDGNARFLSEYRFDVSKLEPVVAKPHSPDNRALA 360

Query: 361 RECKDVKIDRVYVGSCTGGKTEDFLALAKVFLAAGKKVKVPTFIVPATQKVWIDLYSIPV 420
           RECKDVKIDRVYVGSCTGGKTEDFLALAKVF AAGKKVKVPTFIVPATQKVW+DLY IPV
Sbjct: 361 RECKDVKIDRVYVGSCTGGKTEDFLALAKVFHAAGKKVKVPTFIVPATQKVWMDLYGIPV 420

Query: 421 PGAGGKTCSQIFEEAGCDTPASPGCAACLGGPKDTYARMNEAQI 465
           PGAGGKTCSQIFEEAGCDTPASPGCAACLGGP+DTYARMNE Q+
Sbjct: 421 PGAGGKTCSQIFEEAGCDTPASPGCAACLGGPRDTYARMNEPQV 464

[Close]

BLAST of Sed0016595.2 vs. ExPASy Swiss-Prot
Match: Q94AR8 (3-isopropylmalate dehydratase large subunit, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IIL1 PE=1 SV=1)

HSP 1 Score: 748.0 bits (1930), Expect = 6.4e-215
Identity = 354/463 (76.46%), Postives = 415/463 (89.63%), Query Frame = 0


Query: 6   AALASTPFL---TNKKDSDLTAFSSSLPFSFRRCE-RTVSKKICSVMAPQQSERKPSATG 65
           + ++S+PFL   ++K D  +++F  S   S  RC+ +++S+KI SVMAPQ+ +R P  TG
Sbjct: 3   SVISSSPFLCKSSSKSDLGISSFPKSSQISIHRCQKKSISRKIVSVMAPQK-DRSPGTTG 62

Query: 66  SVKTAMTMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIGVFKKEFGENAKVW 125
           SVKT MTMTEKI A+AS+K+ + PG+N+WVNVDVLMTHDVCGPG+ G+FK+EFGE AKVW
Sbjct: 63  SVKTGMTMTEKILARASEKSLVVPGDNIWVNVDVLMTHDVCGPGAFGIFKREFGEKAKVW 122

Query: 126 DREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCHV 185
           D EK+V+IPDHYIFT+D+RANRNVDI+R+  +EQNIKYFYDI DL +F+ NPDYKGVCHV
Sbjct: 123 DPEKIVVIPDHYIFTADKRANRNVDIMREHCREQNIKYFYDITDLGNFKANPDYKGVCHV 182

Query: 186 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLKFVM 245
           ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFA+GIGNTDAGFVLGTGK LLKVPPT++F++
Sbjct: 183 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKILLKVPPTMRFIL 242

Query: 246 DGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGKN 305
           DGEMP YL AKDLILQIIGEISV+GATYK MEF GTT+ESL+MEERMTLCNMVVEAGGKN
Sbjct: 243 DGEMPSYLQAKDLILQIIGEISVAGATYKTMEFSGTTIESLSMEERMTLCNMVVEAGGKN 302

Query: 306 GVIPPDSTTFKYLEDKTSKPFEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALAR 365
           GVIPPD+TT  Y+E++TS PFEPVYSD NA F+++YRFDVSKLEPVVAKPHSPDNRALAR
Sbjct: 303 GVIPPDATTLNYVENRTSVPFEPVYSDGNASFVADYRFDVSKLEPVVAKPHSPDNRALAR 362

Query: 366 ECKDVKIDRVYVGSCTGGKTEDFLALAKVFLAAGKKVKVPTFIVPATQKVWIDLYSIPVP 425
           ECKDVKIDRVY+GSCTGGKTEDF+A AK+F AAG+KVKVPTF+VPATQKVW+D+Y++PVP
Sbjct: 363 ECKDVKIDRVYIGSCTGGKTEDFMAAAKLFHAAGRKVKVPTFLVPATQKVWMDVYALPVP 422

Query: 426 GAGGKTCSQIFEEAGCDTPASPGCAACLGGPKDTYARMNEAQI 465
           GAGGKTC+QIFEEAGCDTPASP C ACLGGP DTYAR+NE Q+
Sbjct: 423 GAGGKTCAQIFEEAGCDTPASPSCGACLGGPADTYARLNEPQV 464

[Close]

BLAST of Sed0016595.2 vs. ExPASy Swiss-Prot
Match: P81291 (Isopropylmalate/citramalate isomerase large subunit OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=leuC PE=1 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.2e-82
Identity = 167/390 (42.82%), Postives = 236/390 (60.51%), Query Frame = 0


Query: 67  MTMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIGVFKKEFGENAKVWDREKV 126
           MT+ EKI AKAS K ++SPG+ V  N+DV M HD+ GP ++    KE+G   KVW+ EK+
Sbjct: 3   MTIVEKILAKASGKKEVSPGDIVMANIDVAMVHDITGPLTVNTL-KEYGIE-KVWNPEKI 62

Query: 127 VIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCHVALAQE 186
           VI+ DH +     +A  N  ++R F KEQ IKYFYDI++           GVCH  L ++
Sbjct: 63  VILFDHQVPADSIKAAENHILMRKFVKEQGIKYFYDIRE-----------GVCHQVLPEK 122

Query: 187 GHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLKFVMDGEMP 246
           GH  PGEV++G DSHTCT GAFG FA+GIG+TD   V  TGK   KVP T+ F + G++ 
Sbjct: 123 GHVAPGEVVVGADSHTCTHGAFGAFATGIGSTDMAHVFATGKLWFKVPETIYFNITGDLQ 182

Query: 247 DYLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGKNGVIPP 306
            Y+ +KD+IL IIGE+ V GATYKA +F G TV+ +++  RMT+ NM +E GGK G+I P
Sbjct: 183 PYVTSKDVILSIIGEVGVDGATYKACQFGGETVKKMSIASRMTMTNMAIEMGGKTGIIEP 242

Query: 307 DSTTFKYLEDK-----TSKPFEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALAR 366
           D  T +Y+++      T +PFE +  DE+A F   Y  +  K+EPV A PH+ DN   AR
Sbjct: 243 DEKTIQYVKEAMKKHGTERPFEVIKGDEDAEFAEVYEIEADKIEPVFACPHNVDNVKQAR 302

Query: 367 ECKDVKIDRVYVGSCTGGKTEDF-LALAKVFLAAGKKVKVPTFIVPATQKVWIDLYSIPV 426
           E     ID+V++GSCT G+ ED  +A+  +    G    V   + PA+++ ++       
Sbjct: 303 EVAGKPIDQVFIGSCTNGRLEDLRMAIKIIEKHGGIADDVRVVVTPASREEYLK------ 362

Query: 427 PGAGGKTCSQIFEEAGCDTPASPGCAACLG 451
             A  +   + F + GC    +P C+AC+G
Sbjct: 363 --ALKEGIIEKFLKYGC-VVTNPSCSACMG 370

[Close]

BLAST of Sed0016595.2 vs. ExPASy Swiss-Prot
Match: O27439 (Probable 3-isopropylmalate dehydratase large subunit OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) OX=187420 GN=leuC PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.2e-77
Identity = 160/386 (41.45%), Postives = 230/386 (59.59%), Query Frame = 0


Query: 66  AMTMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIGVFKKEFGENAKVWDREK 125
           +MT++EKI A+AS K ++  GE V  ++DV MTHD+ GP S+  F +  GE+ +VWD EK
Sbjct: 2   SMTVSEKILARASGKDRVEAGEIVMADIDVAMTHDLTGPLSVESF-RAIGED-RVWDPEK 61

Query: 126 VVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCHVALAQ 185
           +V+I DH +      A +N  I+RDF +EQ I+ FYD+++           GVCH  L +
Sbjct: 62  IVVIFDHQVPADSIEAAQNHMIMRDFVEEQGIRNFYDVRE-----------GVCHQVLPE 121

Query: 186 EGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLKFVMDGEM 245
           +GH  PGEV++GTDSHTCT GA G FA+GIG+TD   V  TGK   +VP TL+F + G++
Sbjct: 122 KGHVVPGEVVVGTDSHTCTHGALGAFATGIGSTDMAMVFATGKLWFRVPETLRFDVRGKL 181

Query: 246 PDYLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGKNGVIP 305
            +++ AKD+IL IIG +   GATY A EF G TV  +++ +RM L NM +E GGK G++ 
Sbjct: 182 REHVYAKDVILNIIGRVGADGATYMACEFAGETVAEMSVSDRMVLSNMAIEMGGKTGIVE 241

Query: 306 PDSTTFKYLEDKTSKPFEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALARECKD 365
           PD  T  Y+  ++ KP+    +D +A  LS    DVS LEP VA PH+ DN     E + 
Sbjct: 242 PDEKTLNYVRRRSGKPWRVFKTDPDAPSLSVMEVDVSDLEPQVACPHNVDNVKPVTEVEG 301

Query: 366 VKIDRVYVGSCTGGKTEDFLALAKVFLAAGKKVKVPTFIVPATQKVWIDLYSIPVPGAGG 425
            +ID+V++GSCT G+  D    A +         V   ++PA+++V+          A  
Sbjct: 302 TEIDQVFLGSCTNGRLSDLRDAAAILKNRKVSDSVRMLVIPASREVY--------RRALD 361

Query: 426 KTCSQIFEEAGCDTPASPGCAACLGG 452
           +   +IF +AG     +P C  CLGG
Sbjct: 362 EGLIEIFVDAGA-LVCNPCCGPCLGG 365

[Close]

BLAST of Sed0016595.2 vs. ExPASy Swiss-Prot
Match: B0TCR2 (3-isopropylmalate dehydratase large subunit OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) OX=498761 GN=leuC PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.0e-76
Identity = 154/398 (38.69%), Postives = 235/398 (59.05%), Query Frame = 0


Query: 67  MTMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIGVFKKEFGENAKVWDREKV 126
           MT+TEKI A  + K  + PGE +   +D+++ +DV  P SI   +K       V+D+E+V
Sbjct: 3   MTITEKILAAHAGKASVEPGELIQAKLDLVLANDVTAPVSIKELEK--ASLDAVFDKERV 62

Query: 127 VIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCHVALAQE 186
           V++ DH++   D ++     I+RDF+++ +I + YD+ D+          G+ H  L ++
Sbjct: 63  VLVQDHFVPAKDIKSAEQSKIVRDFARKHDITHHYDVGDM----------GIEHCLLPEK 122

Query: 187 GHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLKFVMDGEMP 246
           G   PG+ ++G DSHTCT GA G FA+G+G+TD    +  G++  KVP  +KF  +G++P
Sbjct: 123 GLVVPGDAVIGADSHTCTYGALGAFATGVGSTDLAAGIALGEAWFKVPEAIKFEYEGKLP 182

Query: 247 DYLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGKNGVIPP 306
           + +  KDLIL  IG+I V GA Y++MEF G+ ++ L+M+ RMT+CNM +EAGGKNG+I P
Sbjct: 183 EDVTGKDLILHTIGDIGVDGALYQSMEFTGSAIDDLSMDGRMTMCNMAIEAGGKNGIIAP 242

Query: 307 DSTTFKYLEDKTSKPFEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALARECKDV 366
           D  T  Y+E++ ++P++   SD +A++    ++DV KLEPVVA PH P+N     E   V
Sbjct: 243 DKKTIAYVEERATRPYKVYTSDPDAKYARVIKYDVEKLEPVVAFPHLPENTRPVSEAGHV 302

Query: 367 KIDRVYVGSCTGGKTEDFLALAKVFLAAGKKV--KVPTFIVPATQKVWIDLYSIPVPGAG 426
           +ID+V +GSCT G+ ED    AK+    GKKV   V   I P TQ ++          A 
Sbjct: 303 EIDQVVIGSCTNGRIEDLRMAAKIL--QGKKVHKNVRCIIFPGTQAIY--------KQAI 362

Query: 427 GKTCSQIFEEAGCDTPASPGCAACLGGPKDTYARMNEA 463
            +    IF +AG    ++P C  CLGG     A+   A
Sbjct: 363 KEGLIDIFIDAGA-AVSTPTCGPCLGGHMGILAKGERA 377

[Close]

BLAST of Sed0016595.2 vs. ExPASy Swiss-Prot
Match: Q8TVF2 (3-isopropylmalate dehydratase large subunit 1 OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) OX=190192 GN=leuC1 PE=3 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 8.9e-76
Identity = 157/401 (39.15%), Postives = 227/401 (56.61%), Query Frame = 0


Query: 68  TMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIGVFKKEFGENAKVWDREKVV 127
           TM EKI ++AS +     G+ V  N+DV M HD+ GP  I V + E     +VWD  K+V
Sbjct: 4   TMAEKILSRASGE-DAEAGDIVVANIDVAMVHDITGP--ITVQRLEEMGVERVWDPSKIV 63

Query: 128 IIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCHVALAQEG 187
           ++ DH +      A  N  I+R+F +EQ I++FYD+++           GVCH  L ++G
Sbjct: 64  VLFDHQVPADSVEAAENHKIMREFVEEQGIEHFYDVRE-----------GVCHQVLPEKG 123

Query: 188 HCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLKFVMDGEMPD 247
           H RPG+V++G DSHTCT GA G FA+GIG+TD   V  TGK   +VP T +  + GE+P+
Sbjct: 124 HVRPGDVIVGADSHTCTHGALGAFATGIGSTDMAAVFATGKLWFRVPETYRVEITGELPE 183

Query: 248 YLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGKNGVIPPD 307
            + AKD++L++ GEI   GATY A+E+ G  V  +++ +RM LCNM +E G K G++PPD
Sbjct: 184 GVYAKDVVLKVTGEIGADGATYMAIEYHGEVVREMSVSDRMCLCNMAIEMGAKTGMVPPD 243

Query: 308 STTFKYLEDKTSKPFEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALARECKDVK 367
             T +Y++ +      PV  D +AR+ +E   DVS LEP VAKP SPDN     E + + 
Sbjct: 244 EKTLEYVKKRAGTEGRPVEPDPDARYEAELTLDVSDLEPQVAKPFSPDNVVPVGEVEGIA 303

Query: 368 IDRVYVGSCTGGKTEDFLALAKVFLAAGKKVKVPTFIVPATQKVWIDLYSIPVPGAGGKT 427
           ID+V++GSCT G+ ED    A+V         V   ++PA+++V+       V       
Sbjct: 304 IDQVFIGSCTNGRYEDLKVAAEVLEGEEVHDDVRLIVIPASREVYHRTLKDGV------- 363

Query: 428 CSQIFEEAGCDTPASPGCAACLGGPKDTYARMNEAQISRSN 469
             ++  EAG      P C  CLGG     A   E  ++ SN
Sbjct: 364 -LEVLHEAGA-LICPPNCGPCLGGHMGVLAE-GERCVATSN 380

[Close]

BLAST of Sed0016595.2 vs. ExPASy TrEMBL
Match: A0A6J1HIW0 (3-isopropylmalate dehydratase OS=Cucurbita moschata OX=3662 GN=LOC111463365 PE=4 SV=1)

HSP 1 Score: 906.0 bits (2340), Expect = 6.7e-260
Identity = 448/464 (96.55%), Postives = 457/464 (98.49%), Query Frame = 0


Query: 1   MATSTAALASTPFLTNKKDSDLTAFSSSLPFSFRRCERTVSKKICSVMAPQQSERKPSAT 60
           MA STAAL ST FL+NKKDSDL AFSSSLPFSFRRCERTVSKKICSVMAPQQSERKPSAT
Sbjct: 1   MAASTAALTSTSFLSNKKDSDLAAFSSSLPFSFRRCERTVSKKICSVMAPQQSERKPSAT 60

Query: 61  GSVKTAMTMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIGVFKKEFGENAKV 120
           GSVKTAMTMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIG+FKKEFGE+AKV
Sbjct: 61  GSVKTAMTMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIGIFKKEFGEDAKV 120

Query: 121 WDREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCH 180
           WDREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCH
Sbjct: 121 WDREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCH 180

Query: 181 VALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLKFV 240
           VALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTL+FV
Sbjct: 181 VALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLRFV 240

Query: 241 MDGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGK 300
           MDGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGK
Sbjct: 241 MDGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGK 300

Query: 301 NGVIPPDSTTFKYLEDKTSKPFEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALA 360
           NGVIPPDSTTFKYLE KTSK +EPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALA
Sbjct: 301 NGVIPPDSTTFKYLEGKTSKAYEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALA 360

Query: 361 RECKDVKIDRVYVGSCTGGKTEDFLALAKVFLAAGKKVKVPTFIVPATQKVWIDLYSIPV 420
           RECKDVKIDRVYVGSCTGGKTEDFLALAKVFLAAG+KVKVPTFIVPATQKVW+DLYSIPV
Sbjct: 361 RECKDVKIDRVYVGSCTGGKTEDFLALAKVFLAAGRKVKVPTFIVPATQKVWMDLYSIPV 420

Query: 421 PGAGGKTCSQIFEEAGCDTPASPGCAACLGGPKDTYARMNEAQI 465
           PGAGGKTCSQIFEEAGCDTPASPGCAACLGGP+DTYARMNE Q+
Sbjct: 421 PGAGGKTCSQIFEEAGCDTPASPGCAACLGGPRDTYARMNEPQV 464

[Close]

BLAST of Sed0016595.2 vs. ExPASy TrEMBL
Match: A0A6J1IC64 (3-isopropylmalate dehydratase OS=Cucurbita maxima OX=3661 GN=LOC111471179 PE=4 SV=1)

HSP 1 Score: 905.6 bits (2339), Expect = 8.8e-260
Identity = 447/464 (96.34%), Postives = 457/464 (98.49%), Query Frame = 0


Query: 1   MATSTAALASTPFLTNKKDSDLTAFSSSLPFSFRRCERTVSKKICSVMAPQQSERKPSAT 60
           MA STAAL ST FL+NKKDSDL AFSSSLPFSFRRCERTVSKKICSVMAPQQSERKPSAT
Sbjct: 1   MAASTAALTSTSFLSNKKDSDLAAFSSSLPFSFRRCERTVSKKICSVMAPQQSERKPSAT 60

Query: 61  GSVKTAMTMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIGVFKKEFGENAKV 120
           GSVKTAMTMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIG+FKKEFGE+AK+
Sbjct: 61  GSVKTAMTMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIGIFKKEFGEDAKI 120

Query: 121 WDREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCH 180
           WDREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCH
Sbjct: 121 WDREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCH 180

Query: 181 VALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLKFV 240
           VALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTL+FV
Sbjct: 181 VALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLRFV 240

Query: 241 MDGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGK 300
           MDGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGK
Sbjct: 241 MDGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGK 300

Query: 301 NGVIPPDSTTFKYLEDKTSKPFEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALA 360
           NGVIPPDSTTFKYLE KTSK +EPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALA
Sbjct: 301 NGVIPPDSTTFKYLEGKTSKAYEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALA 360

Query: 361 RECKDVKIDRVYVGSCTGGKTEDFLALAKVFLAAGKKVKVPTFIVPATQKVWIDLYSIPV 420
           RECKDVKIDRVYVGSCTGGKTEDFLALAKVFLAAG+KVKVPTFIVPATQKVW+DLYSIPV
Sbjct: 361 RECKDVKIDRVYVGSCTGGKTEDFLALAKVFLAAGRKVKVPTFIVPATQKVWMDLYSIPV 420

Query: 421 PGAGGKTCSQIFEEAGCDTPASPGCAACLGGPKDTYARMNEAQI 465
           PGAGGKTCSQIFEEAGCDTPASPGCAACLGGP+DTYARMNE Q+
Sbjct: 421 PGAGGKTCSQIFEEAGCDTPASPGCAACLGGPRDTYARMNEPQV 464

[Close]

BLAST of Sed0016595.2 vs. ExPASy TrEMBL
Match: A0A5D3E4R8 (3-isopropylmalate dehydratase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003900 PE=4 SV=1)

HSP 1 Score: 897.1 bits (2317), Expect = 3.1e-257
Identity = 440/463 (95.03%), Postives = 455/463 (98.27%), Query Frame = 0


Query: 2   ATSTAALASTPFLTNKKDSDLTAFSSSLPFSFRRCERTVSKKICSVMAPQQSERKPSATG 61
           A++ AAL ST FL+NKKD D+ AFSSSLPFS+RRCERTVSKKICSVM PQQSERKPSATG
Sbjct: 3   ASTAAALTSTAFLSNKKDLDVAAFSSSLPFSYRRCERTVSKKICSVMTPQQSERKPSATG 62

Query: 62  SVKTAMTMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIGVFKKEFGENAKVW 121
           SVKTAMTMTEKIFAKASQKT+LSPGENVWV+VDVLMTHDVCGPGSIG+FKKEFGENAKVW
Sbjct: 63  SVKTAMTMTEKIFAKASQKTELSPGENVWVDVDVLMTHDVCGPGSIGIFKKEFGENAKVW 122

Query: 122 DREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCHV 181
           DREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCHV
Sbjct: 123 DREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCHV 182

Query: 182 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLKFVM 241
           ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTL+FVM
Sbjct: 183 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLRFVM 242

Query: 242 DGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGKN 301
           DGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTT+ESL MEERMTLCNMVVEAGGKN
Sbjct: 243 DGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTTIESLNMEERMTLCNMVVEAGGKN 302

Query: 302 GVIPPDSTTFKYLEDKTSKPFEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALAR 361
           GVIPPDSTTFKYLEDKT+KPFEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALAR
Sbjct: 303 GVIPPDSTTFKYLEDKTTKPFEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALAR 362

Query: 362 ECKDVKIDRVYVGSCTGGKTEDFLALAKVFLAAGKKVKVPTFIVPATQKVWIDLYSIPVP 421
           ECKDVKIDRVYVGSCTGGKTEDFLALAKVF+AAGKKVKVPTFIVPATQKVW+DLYSIPVP
Sbjct: 363 ECKDVKIDRVYVGSCTGGKTEDFLALAKVFVAAGKKVKVPTFIVPATQKVWMDLYSIPVP 422

Query: 422 GAGGKTCSQIFEEAGCDTPASPGCAACLGGPKDTYARMNEAQI 465
           GAGGKTCSQIFEEAGCDTPASPGCAACLGGP+DTYARMNE Q+
Sbjct: 423 GAGGKTCSQIFEEAGCDTPASPGCAACLGGPRDTYARMNEPQV 465

[Close]

BLAST of Sed0016595.2 vs. ExPASy TrEMBL
Match: A0A1S3CQ00 (3-isopropylmalate dehydratase OS=Cucumis melo OX=3656 GN=LOC103503487 PE=4 SV=1)

HSP 1 Score: 897.1 bits (2317), Expect = 3.1e-257
Identity = 440/463 (95.03%), Postives = 455/463 (98.27%), Query Frame = 0


Query: 2   ATSTAALASTPFLTNKKDSDLTAFSSSLPFSFRRCERTVSKKICSVMAPQQSERKPSATG 61
           A++ AAL ST FL+NKKD D+ AFSSSLPFS+RRCERTVSKKICSVM PQQSERKPSATG
Sbjct: 3   ASTAAALTSTAFLSNKKDLDVAAFSSSLPFSYRRCERTVSKKICSVMTPQQSERKPSATG 62

Query: 62  SVKTAMTMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIGVFKKEFGENAKVW 121
           SVKTAMTMTEKIFAKASQKT+LSPGENVWV+VDVLMTHDVCGPGSIG+FKKEFGENAKVW
Sbjct: 63  SVKTAMTMTEKIFAKASQKTELSPGENVWVDVDVLMTHDVCGPGSIGIFKKEFGENAKVW 122

Query: 122 DREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCHV 181
           DREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCHV
Sbjct: 123 DREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCHV 182

Query: 182 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLKFVM 241
           ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTL+FVM
Sbjct: 183 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLRFVM 242

Query: 242 DGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGKN 301
           DGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTT+ESL MEERMTLCNMVVEAGGKN
Sbjct: 243 DGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTTIESLNMEERMTLCNMVVEAGGKN 302

Query: 302 GVIPPDSTTFKYLEDKTSKPFEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALAR 361
           GVIPPDSTTFKYLEDKT+KPFEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALAR
Sbjct: 303 GVIPPDSTTFKYLEDKTTKPFEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALAR 362

Query: 362 ECKDVKIDRVYVGSCTGGKTEDFLALAKVFLAAGKKVKVPTFIVPATQKVWIDLYSIPVP 421
           ECKDVKIDRVYVGSCTGGKTEDFLALAKVF+AAGKKVKVPTFIVPATQKVW+DLYSIPVP
Sbjct: 363 ECKDVKIDRVYVGSCTGGKTEDFLALAKVFVAAGKKVKVPTFIVPATQKVWMDLYSIPVP 422

Query: 422 GAGGKTCSQIFEEAGCDTPASPGCAACLGGPKDTYARMNEAQI 465
           GAGGKTCSQIFEEAGCDTPASPGCAACLGGP+DTYARMNE Q+
Sbjct: 423 GAGGKTCSQIFEEAGCDTPASPGCAACLGGPRDTYARMNEPQV 465

[Close]

BLAST of Sed0016595.2 vs. ExPASy TrEMBL
Match: A0A0A0LEJ4 (3-isopropylmalate dehydratase OS=Cucumis sativus OX=3659 GN=Csa_3G912340 PE=4 SV=1)

HSP 1 Score: 896.0 bits (2314), Expect = 7.0e-257
Identity = 439/463 (94.82%), Postives = 455/463 (98.27%), Query Frame = 0


Query: 2   ATSTAALASTPFLTNKKDSDLTAFSSSLPFSFRRCERTVSKKICSVMAPQQSERKPSATG 61
           A++ AAL ST FLTNKKD D+ AFSSSLPFS+RRCERTVSKKICSVM PQQSERKPSA+G
Sbjct: 3   ASTAAALTSTAFLTNKKDLDVAAFSSSLPFSYRRCERTVSKKICSVMTPQQSERKPSASG 62

Query: 62  SVKTAMTMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIGVFKKEFGENAKVW 121
           SVKTAMTMTEKIFAKASQKT+LSPGENVWV+VDVLMTHDVCGPGSIG+FKKEFGENAKVW
Sbjct: 63  SVKTAMTMTEKIFAKASQKTELSPGENVWVDVDVLMTHDVCGPGSIGIFKKEFGENAKVW 122

Query: 122 DREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCHV 181
           DREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCHV
Sbjct: 123 DREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCHV 182

Query: 182 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLKFVM 241
           ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGF+LGTGKSLLKVPPTL+FVM
Sbjct: 183 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFILGTGKSLLKVPPTLRFVM 242

Query: 242 DGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGKN 301
           DGEMPDYLLAKDLILQIIGEISVSGATYKAMEF+GTT+ESLTMEERMTLCNMVVEAGGKN
Sbjct: 243 DGEMPDYLLAKDLILQIIGEISVSGATYKAMEFIGTTIESLTMEERMTLCNMVVEAGGKN 302

Query: 302 GVIPPDSTTFKYLEDKTSKPFEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALAR 361
           GVIPPDSTTFKYLEDKT+KPFEPVYSD NARFLSEYRFDVSKLEPVVAKPHSPDNRALAR
Sbjct: 303 GVIPPDSTTFKYLEDKTTKPFEPVYSDANARFLSEYRFDVSKLEPVVAKPHSPDNRALAR 362

Query: 362 ECKDVKIDRVYVGSCTGGKTEDFLALAKVFLAAGKKVKVPTFIVPATQKVWIDLYSIPVP 421
           ECKDVKIDRVYVGSCTGGKTEDFLALAKVF AAGKKVKVPTFIVPATQKVW+DLYSIPVP
Sbjct: 363 ECKDVKIDRVYVGSCTGGKTEDFLALAKVFHAAGKKVKVPTFIVPATQKVWMDLYSIPVP 422

Query: 422 GAGGKTCSQIFEEAGCDTPASPGCAACLGGPKDTYARMNEAQI 465
           GAGGKTCSQIFEEAGCDTPASPGCAACLGGP+DTYARMNEAQ+
Sbjct: 423 GAGGKTCSQIFEEAGCDTPASPGCAACLGGPRDTYARMNEAQV 465

[Close]

BLAST of Sed0016595.2 vs. TAIR 10
Match: AT4G13430.1 (isopropyl malate isomerase large subunit 1 )

HSP 1 Score: 748.0 bits (1930), Expect = 4.5e-216
Identity = 354/463 (76.46%), Postives = 415/463 (89.63%), Query Frame = 0


Query: 6   AALASTPFL---TNKKDSDLTAFSSSLPFSFRRCE-RTVSKKICSVMAPQQSERKPSATG 65
           + ++S+PFL   ++K D  +++F  S   S  RC+ +++S+KI SVMAPQ+ +R P  TG
Sbjct: 3   SVISSSPFLCKSSSKSDLGISSFPKSSQISIHRCQKKSISRKIVSVMAPQK-DRSPGTTG 62

Query: 66  SVKTAMTMTEKIFAKASQKTQLSPGENVWVNVDVLMTHDVCGPGSIGVFKKEFGENAKVW 125
           SVKT MTMTEKI A+AS+K+ + PG+N+WVNVDVLMTHDVCGPG+ G+FK+EFGE AKVW
Sbjct: 63  SVKTGMTMTEKILARASEKSLVVPGDNIWVNVDVLMTHDVCGPGAFGIFKREFGEKAKVW 122

Query: 126 DREKVVIIPDHYIFTSDERANRNVDILRDFSKEQNIKYFYDIKDLSDFRVNPDYKGVCHV 185
           D EK+V+IPDHYIFT+D+RANRNVDI+R+  +EQNIKYFYDI DL +F+ NPDYKGVCHV
Sbjct: 123 DPEKIVVIPDHYIFTADKRANRNVDIMREHCREQNIKYFYDITDLGNFKANPDYKGVCHV 182

Query: 186 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFASGIGNTDAGFVLGTGKSLLKVPPTLKFVM 245
           ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFA+GIGNTDAGFVLGTGK LLKVPPT++F++
Sbjct: 183 ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKILLKVPPTMRFIL 242

Query: 246 DGEMPDYLLAKDLILQIIGEISVSGATYKAMEFLGTTVESLTMEERMTLCNMVVEAGGKN 305
           DGEMP YL AKDLILQIIGEISV+GATYK MEF GTT+ESL+MEERMTLCNMVVEAGGKN
Sbjct: 243 DGEMPSYLQAKDLILQIIGEISVAGATYKTMEFSGTTIESLSMEERMTLCNMVVEAGGKN 302

Query: 306 GVIPPDSTTFKYLEDKTSKPFEPVYSDENARFLSEYRFDVSKLEPVVAKPHSPDNRALAR 365
           GVIPPD+TT  Y+E++TS PFEPVYSD NA F+++YRFDVSKLEPVVAKPHSPDNRALAR
Sbjct: 303 GVIPPDATTLNYVENRTSVPFEPVYSDGNASFVADYRFDVSKLEPVVAKPHSPDNRALAR 362

Query: 366 ECKDVKIDRVYVGSCTGGKTEDFLALAKVFLAAGKKVKVPTFIVPATQKVWIDLYSIPVP 425
           ECKDVKIDRVY+GSCTGGKTEDF+A AK+F AAG+KVKVPTF+VPATQKVW+D+Y++PVP
Sbjct: 363 ECKDVKIDRVYIGSCTGGKTEDFMAAAKLFHAAGRKVKVPTFLVPATQKVWMDVYALPVP 422

Query: 426 GAGGKTCSQIFEEAGCDTPASPGCAACLGGPKDTYARMNEAQI 465
           GAGGKTC+QIFEEAGCDTPASP C ACLGGP DTYAR+NE Q+
Sbjct: 423 GAGGKTCAQIFEEAGCDTPASPSCGACLGGPADTYARLNEPQV 464

The following BLAST results are available for this feature:

BLAST of Sed0016595.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963044.1	1.4e-259	96.55	3-isopropylmalate dehydratase large subunit, chloroplastic [Cucurbita moschata] ...	[more]
XP_022972644.1	1.8e-259	96.34	3-isopropylmalate dehydratase large subunit, chloroplastic [Cucurbita maxima]	[more]
XP_008465910.1	6.5e-257	95.03	PREDICTED: 3-isopropylmalate dehydratase large subunit [Cucumis melo] >KAA003851...	[more]
XP_004148369.1	1.4e-256	94.82	3-isopropylmalate dehydratase large subunit, chloroplastic [Cucumis sativus] >KG...	[more]
XP_022132847.1	3.0e-254	94.18	3-isopropylmalate dehydratase large subunit, chloroplastic [Momordica charantia]	[more]

BLAST of Sed0016595.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AR8	6.4e-215	76.46	3-isopropylmalate dehydratase large subunit, chloroplastic OS=Arabidopsis thalia...	[more]
P81291	2.2e-82	42.82	Isopropylmalate/citramalate isomerase large subunit OS=Methanocaldococcus jannas...	[more]
O27439	1.2e-77	41.45	Probable 3-isopropylmalate dehydratase large subunit OS=Methanothermobacter ther...	[more]
B0TCR2	4.0e-76	38.69	3-isopropylmalate dehydratase large subunit OS=Heliobacterium modesticaldum (str...	[more]
Q8TVF2	8.9e-76	39.15	3-isopropylmalate dehydratase large subunit 1 OS=Methanopyrus kandleri (strain A...	[more]

BLAST of Sed0016595.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HIW0	6.7e-260	96.55	3-isopropylmalate dehydratase OS=Cucurbita moschata OX=3662 GN=LOC111463365 PE=4...	[more]
A0A6J1IC64	8.8e-260	96.34	3-isopropylmalate dehydratase OS=Cucurbita maxima OX=3661 GN=LOC111471179 PE=4 S...	[more]
A0A5D3E4R8	3.1e-257	95.03	3-isopropylmalate dehydratase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3CQ00	3.1e-257	95.03	3-isopropylmalate dehydratase OS=Cucumis melo OX=3656 GN=LOC103503487 PE=4 SV=1	[more]
A0A0A0LEJ4	7.0e-257	94.82	3-isopropylmalate dehydratase OS=Cucumis sativus OX=3659 GN=Csa_3G912340 PE=4 SV...	[more]

BLAST of Sed0016595.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13430.1	4.5e-216	76.46	isopropyl malate isomerase large subunit 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001030	Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain	PRINTS	PR00415	ACONITASE	coord: 204..219 score: 38.01 coord: 190..203 score: 47.67 coord: 437..450 score: 31.34 coord: 280..293 score: 49.85 coord: 266..279 score: 35.42
IPR001030	Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain	PFAM	PF00330	Aconitase	coord: 72..468 e-value: 2.6E-63 score: 214.7
IPR015931	Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3	GENE3D	3.30.499.10	Aconitase, domain 3	coord: 68..346 e-value: 3.6E-97 score: 326.7
IPR015931	Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3	GENE3D	3.30.499.10	Aconitase, domain 3	coord: 349..473 e-value: 4.9E-23 score: 83.4
None	No IPR available	PANTHER	PTHR43822:SF13	DEHYDRATASE, PUTATIVE-RELATED	coord: 8..465
None	No IPR available	PANTHER	PTHR43822	HOMOACONITASE, MITOCHONDRIAL-RELATED	coord: 8..465
IPR033941	3-Isopropylmalate dehydratase, catalytic domain	CDD	cd01583	IPMI	coord: 95..468 e-value: 4.31715E-175 score: 494.786
IPR036008	Aconitase, iron-sulfur domain	SUPERFAMILY	53732	Aconitase iron-sulfur domain	coord: 65..463

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0016595	Sed0016595	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0016595.2-exon	Sed0016595.2-exon-LG14:3061868..3062822	exon
Sed0016595.2-exon	Sed0016595.2-exon-LG14:3063830..3063988	exon
Sed0016595.2-exon	Sed0016595.2-exon-LG14:3064083..3064130	exon
Sed0016595.2-exon	Sed0016595.2-exon-LG14:3064524..3064655	exon
Sed0016595.2-exon	Sed0016595.2-exon-LG14:3064864..3064918	exon
Sed0016595.2-exon	Sed0016595.2-exon-LG14:3066069..3066118	exon
Sed0016595.2-exon	Sed0016595.2-exon-LG14:3066655..3066750	exon
Sed0016595.2-exon	Sed0016595.2-exon-LG14:3066888..3066965	exon
Sed0016595.2-exon	Sed0016595.2-exon-LG14:3071776..3071850	exon
Sed0016595.2-exon	Sed0016595.2-exon-LG14:3073015..3073131	exon
Sed0016595.2-exon	Sed0016595.2-exon-LG14:3073231..3073299	exon
Sed0016595.2-exon	Sed0016595.2-exon-LG14:3073369..3073521	exon
Sed0016595.2-exon	Sed0016595.2-exon-LG14:3074841..3075011	exon
Sed0016595.2-exon	Sed0016595.2-exon-LG14:3075095..3075229	exon
Sed0016595.2-exon	Sed0016595.2-exon-LG14:3075385..3075613	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0016595.2-three_prime_utr	Sed0016595.2-three_prime_utr-LG14:3061868..3062780	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0016595.2-cds	Sed0016595.2-cds-LG14:3062781..3062822	CDS
Sed0016595.2-cds	Sed0016595.2-cds-LG14:3063830..3063988	CDS
Sed0016595.2-cds	Sed0016595.2-cds-LG14:3064083..3064130	CDS
Sed0016595.2-cds	Sed0016595.2-cds-LG14:3064524..3064655	CDS
Sed0016595.2-cds	Sed0016595.2-cds-LG14:3064864..3064918	CDS
Sed0016595.2-cds	Sed0016595.2-cds-LG14:3066069..3066118	CDS
Sed0016595.2-cds	Sed0016595.2-cds-LG14:3066655..3066750	CDS
Sed0016595.2-cds	Sed0016595.2-cds-LG14:3066888..3066965	CDS
Sed0016595.2-cds	Sed0016595.2-cds-LG14:3071776..3071850	CDS
Sed0016595.2-cds	Sed0016595.2-cds-LG14:3073015..3073131	CDS
Sed0016595.2-cds	Sed0016595.2-cds-LG14:3073231..3073299	CDS
Sed0016595.2-cds	Sed0016595.2-cds-LG14:3073369..3073521	CDS
Sed0016595.2-cds	Sed0016595.2-cds-LG14:3074841..3075011	CDS
Sed0016595.2-cds	Sed0016595.2-cds-LG14:3075095..3075229	CDS
Sed0016595.2-cds	Sed0016595.2-cds-LG14:3075385..3075435	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0016595.2-five_prime_utr	Sed0016595.2-five_prime_utr-LG14:3075436..3075613	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0016595.2	Sed0016595.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009098	leucine biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003861	3-isopropylmalate dehydratase activity
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0046872	metal ion binding