Sed0016262.1 (mRNA) Chayote v1

Overview


Name	Sed0016262.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	multiple organellar RNA editing factor 9, chloroplastic
Location	LG07: 41893440 .. 41896133 (+)
Sequence length	1112
RNA-Seq Expression	Sed0016262.1
Synteny	Sed0016262.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAACCTCATCATCTTCTTCTTCTTCGTTTTCTCTGTGATGCTAATGGCTACCAATCTCTCATTTTCTCCTCATCAAACCCTAATTCCACTTCAGAAGCCATTGCTGTCACCACGAGTTCATCTCCGTCGCTTTGTTCATCTCAACTCAGTGAGTCGGATTCCGAGTTCTCGCCTTCGTTCCGGCTCTCATTCGAGAGTTTTGGTTCGAGCTGCTTTGGATAGCGATTACTCGCCGAGGAGGAGTAGCAGCAATGAGCAGAGAGAGACGATTATGTTGCCTGGTTGTGATTATAACCATTGGCTTATTGTAATGGAGTTTCCTAAAGATCCGGCTCCGACGAGGGAGCAGATGATTGATACGTATCTTAACACTCTTGCTACTGTATTGGGAAGGTTCTATCTCTCTCTTTTTTCGCTTTTTCTTTCTTTGTGTATGTTGTGTTTTGCTGTCTGTCCCGGCTGGTAAAGGAGTTATAGAAATCTATGAGGTTTTGGAAATGAACCTTGAGTTGTGTAATTATGCTGTAGGTAGCGGGTTGGAGTCTGGTGAGGATTTGAATTTCGTTTTTGAAGTGGAACAAGAACGATCAATATCTGTTTTCCGAGAGATTTTTTTTGTAATAATAGAAACCACAGGAAATTATTAGAGGCCAGCACAATAAGAAAGTATACACGATATATGATAGAGGAAATATAAAATGTAAGTCAACTAGTATAATATAAAGCCTATGAGTTCAAATCTTCTATTCCAATTGTTGATGAACTAAAAAATATATAATGTAATTCAAACTTAACCATCATACATAGATTAGTCTTGTGGTTAATAAAGGCTTTAGAAAATCATAAAATGTCTAGAGGGAATGAGCTCAATTTATAGTGGTTAGCTATTTATGAATAAATTTTCTACAAATGCTAACTTAACTATCATGAATTGGCCTAGTGGTCAACAAAGGATTTTAAAAATCATAAATTGTTCTAGAGAGAATGAGTTTAATATATGGTGGTCAGCTACTTAGAAATTAAGTTTGTGCAAATGTTTAGAGCAATTACGCAAGGCATAATTTTTTTTTGAAACCAATTAGGCAAGGCATTATGAAAAGTTCAAATGGACCTATTACTATAAGACTTAATGAAAAGTTTAAGAACTTACATGAAAGTGAGTACCTCAGAATGACATTCATTCTTCTTCGCTTGAGTTTGGAGGTTCAGATTCTCATATCTTCAAATTGGTTACGACTACACATGTACTTTAACCTTTATTTTATTGGAGTGGTTACTCTGAAAACTTGAGAAGCGAACCTTATTCAATTATAATGAATAGTTTTTTTTTTGAGATTACAACAATTGGGAATGGGGGAGACTCGAACCAAAGACCTTTAGGTCAATAGGTGTACATTGATGCCGCTTGAGCTCCTGCTCTTGTTGGCGATTATAATGAATAGTTGGCCCAGGTTATTTTCATCTCTCATGTGTGGATTTTCTTGGAAATATGGTTAATGTTATTTTCATATCTCATGTGTGGATTTTTCTCGGAAACAGCATGGAAGAAGCTAAGAAAAATATGTATGCCTTCAGCACCACCACCTACACTGGATTCCAATGCACTGTGTCCGAAGAAACATCCGAGAAATTTAAGGGTAAATGTTAGTTTATGAATTATTCTTGGAAGTCCTGTTCTGACAACTATTATAACTGCTGAGAAATGCCACCTGAACCTTTTCGTTGCAGGATTACCCGGAGTTTTGTGGGTGTTGCCAGATTCTTATATAGATGTCAAGAACAAAGATTATGGAGGTTGGGTTTATTTTATATCCTCTCTATATTTTTATTTCTTGTCTCTTGAAGATGGTATTGCATGTATGTCAGATTCTTACAGTGGTTAGAACTTAGAAGTTATGAGTTCAATCTATTATGATCACTTATCTAAGAATTAATTTCTTACGAGTTATCTTGAAATGTAGTTTGGTAATGTTCTGTAAGAATACTCAAATTACACACAACACATGAGTTGTCCTAGACATTTACAGATATTAAAAAGAAAAAGATAAAGCACTAGGATTCGTATAGTAAATAAAACAAGTAGGATTCCTTTCACGAGTTTTCTCTGGATTATCATATTATCTTGCTGTTAACATTTAGGTGACAAGTATATAAATGGGGAGATAATTCCATCCAAGTATCCTGTTTACGAACCGAAGAAACGAAGAGAAACAAAATACGAAAGTAGGAGATACGAAAGAAAAAGGGATGGACCTCCTCCCGAAAAGCCGAGACAACAAGCGACCAGAACTGAATCAAATTCAGGATAAGGTAGTGCAGCAATTTTCCTTCTATTACTTGCAGTGCTTTGCAAGGGAGAAATTGAATGTTTTTGTTCATTTCCTTTGCAATTCATTAGTGTATGTGACTTGAGATTGTGCTTTGGAACTGAACTACTAAGAAAGATAGATGAAGAATGAAGAGGTGCACCAGGGAATTTCATACTGTTCTTAGAATTTTGTACATGCTGTTCTTTAGTTCAACCTGAAAAAGAAATCTTGAATTTTATTGTGATGTGGCCTTGAAGCTCAGAGTATCATTGGAATGTAATGATTTTAGAGTAGTTTTGGTTGATTGATTAGCTCTTAAACCATGTCTCCTTTTCCTAAAGTGTTCTTAAATCCAGGCCTTTTGCAAACCAAAACACAATATG

mRNA sequence

AAAAACCTCATCATCTTCTTCTTCTTCGTTTTCTCTGTGATGCTAATGGCTACCAATCTCTCATTTTCTCCTCATCAAACCCTAATTCCACTTCAGAAGCCATTGCTGTCACCACGAGTTCATCTCCGTCGCTTTGTTCATCTCAACTCAGTGAGTCGGATTCCGAGTTCTCGCCTTCGTTCCGGCTCTCATTCGAGAGTTTTGGTTCGAGCTGCTTTGGATAGCGATTACTCGCCGAGGAGGAGTAGCAGCAATGAGCAGAGAGAGACGATTATGTTGCCTGGTTGTGATTATAACCATTGGCTTATTGTAATGGAGTTTCCTAAAGATCCGGCTCCGACGAGGGAGCAGATGATTGATACGTATCTTAACACTCTTGCTACTGTATTGGGAAGCATGGAAGAAGCTAAGAAAAATATGTATGCCTTCAGCACCACCACCTACACTGGATTCCAATGCACTGTGTCCGAAGAAACATCCGAGAAATTTAAGGGATTACCCGGAGTTTTGTGGGTGTTGCCAGATTCTTATATAGATGTCAAGAACAAAGATTATGGAGGTGACAAGTATATAAATGGGGAGATAATTCCATCCAAGTATCCTGTTTACGAACCGAAGAAACGAAGAGAAACAAAATACGAAAGTAGGAGATACGAAAGAAAAAGGGATGGACCTCCTCCCGAAAAGCCGAGACAACAAGCGACCAGAACTGAATCAAATTCAGGATAAGGTAGTGCAGCAATTTTCCTTCTATTACTTGCAGTGCTTTGCAAGGGAGAAATTGAATGTTTTTGTTCATTTCCTTTGCAATTCATTAGTGTATGTGACTTGAGATTGTGCTTTGGAACTGAACTACTAAGAAAGATAGATGAAGAATGAAGAGGTGCACCAGGGAATTTCATACTGTTCTTAGAATTTTGTACATGCTGTTCTTTAGTTCAACCTGAAAAAGAAATCTTGAATTTTATTGTGATGTGGCCTTGAAGCTCAGAGTATCATTGGAATGTAATGATTTTAGAGTAGTTTTGGTTGATTGATTAGCTCTTAAACCATGTCTCCTTTTCCTAAAGTGTTCTTAAATCCAGGCCTTTTGCAAACCAAAACACAATATG

Coding sequence (CDS)

ATGCTAATGGCTACCAATCTCTCATTTTCTCCTCATCAAACCCTAATTCCACTTCAGAAGCCATTGCTGTCACCACGAGTTCATCTCCGTCGCTTTGTTCATCTCAACTCAGTGAGTCGGATTCCGAGTTCTCGCCTTCGTTCCGGCTCTCATTCGAGAGTTTTGGTTCGAGCTGCTTTGGATAGCGATTACTCGCCGAGGAGGAGTAGCAGCAATGAGCAGAGAGAGACGATTATGTTGCCTGGTTGTGATTATAACCATTGGCTTATTGTAATGGAGTTTCCTAAAGATCCGGCTCCGACGAGGGAGCAGATGATTGATACGTATCTTAACACTCTTGCTACTGTATTGGGAAGCATGGAAGAAGCTAAGAAAAATATGTATGCCTTCAGCACCACCACCTACACTGGATTCCAATGCACTGTGTCCGAAGAAACATCCGAGAAATTTAAGGGATTACCCGGAGTTTTGTGGGTGTTGCCAGATTCTTATATAGATGTCAAGAACAAAGATTATGGAGGTGACAAGTATATAAATGGGGAGATAATTCCATCCAAGTATCCTGTTTACGAACCGAAGAAACGAAGAGAAACAAAATACGAAAGTAGGAGATACGAAAGAAAAAGGGATGGACCTCCTCCCGAAAAGCCGAGACAACAAGCGACCAGAACTGAATCAAATTCAGGATAA

Protein sequence

MLMATNLSFSPHQTLIPLQKPLLSPRVHLRRFVHLNSVSRIPSSRLRSGSHSRVLVRAALDSDYSPRRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEKPRQQATRTESNSG

Homology

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BLAST of Sed0016262.1 vs. NCBI nr
Match: XP_004151975.1 (multiple organellar RNA editing factor 9, chloroplastic [Cucumis sativus] >XP_008454611.1 PREDICTED: multiple organellar RNA editing factor 9, chloroplastic [Cucumis melo] >KAA0063450.1 DAG protein [Cucumis melo var. makuwa] >KAE8650675.1 hypothetical protein Csa_010519 [Cucumis sativus])

HSP 1 Score: 408.7 bits (1049), Expect = 3.4e-110
Identity = 210/231 (90.91%), Postives = 216/231 (93.51%), Query Frame = 0


Query: 1   MLMATNLSFSPHQTLIPLQKPLLSPRVHLRRFVHLNSVSRIPSSRLRSGSHSRVLVRAAL 60
           MLMATNLSFSP Q+LIPLQKP L  RV L  F+HLNSVS+I ++RL SGS SRVLVRAAL
Sbjct: 1   MLMATNLSFSP-QSLIPLQKPSLLQRVQLGHFLHLNSVSQISTARLHSGSQSRVLVRAAL 60

Query: 61  DSDYSPRRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM 120
           DSDYS +RSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM
Sbjct: 61  DSDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM 120

Query: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180
           EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING
Sbjct: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180

Query: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPE--KPRQQATRTESNSG 230
           EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPE  KPR Q TRTESNSG
Sbjct: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRKPRPQPTRTESNSG 230

[Close]

BLAST of Sed0016262.1 vs. NCBI nr
Match: XP_038900065.1 (multiple organellar RNA editing factor 9, chloroplastic [Benincasa hispida])

HSP 1 Score: 401.4 bits (1030), Expect = 5.4e-108
Identity = 209/231 (90.48%), Postives = 215/231 (93.07%), Query Frame = 0


Query: 1   MLMATNLSFSPHQTLIPLQKPLLSPRVHLRRFVHLNSVSRIPSSRL-RSGSHSRVLVRAA 60
           MLMATNLSFSP Q+LIPLQKP L PRV L  F+ LNSVSRI ++RL  SGS S VLVRAA
Sbjct: 1   MLMATNLSFSP-QSLIPLQKPSLLPRVQLGHFLQLNSVSRISTARLHESGSRSGVLVRAA 60

Query: 61  LDSDYSPRRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGS 120
           LDSDYS +RSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGS
Sbjct: 61  LDSDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGS 120

Query: 121 MEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYIN 180
           MEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYIN
Sbjct: 121 MEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYIN 180

Query: 181 GEIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPE--KPRQQATRTESNS 229
           GEIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPE  +PR QATRTESNS
Sbjct: 181 GEIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRRPRPQATRTESNS 230

[Close]

BLAST of Sed0016262.1 vs. NCBI nr
Match: XP_023535131.1 (multiple organellar RNA editing factor 9, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023535132.1 multiple organellar RNA editing factor 9, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396.7 bits (1018), Expect = 1.3e-106
Identity = 207/232 (89.22%), Postives = 212/232 (91.38%), Query Frame = 0


Query: 1   MLMATNLSFSPHQTLIPLQKPLLSPRVHLRRFVHLNSVSRIPSSRLRSGSHSRVLVRAAL 60
           MLMA NLSFSPH +LIP QKP L PR  L RF+ LNSVSRI + RLRSGS S VLVRAAL
Sbjct: 1   MLMAINLSFSPH-SLIPFQKPSLLPRQELGRFLQLNSVSRISNVRLRSGSQSGVLVRAAL 60

Query: 61  DSDYSPRRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM 120
           DSDYS +RSSSNE+RET MLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM
Sbjct: 61  DSDYSSKRSSSNEERETFMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM 120

Query: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180
           EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING
Sbjct: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180

Query: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPE--KPRQQA-TRTESNSG 230
           EIIPSKYPVYEPKKRRETKYESRRYERKRDGP PE  KPR QA TRTESNSG
Sbjct: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPSPEQRKPRPQATTRTESNSG 231

[Close]

BLAST of Sed0016262.1 vs. NCBI nr
Match: KAG6592006.1 (Multiple organellar RNA editing factor 9, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 396.4 bits (1017), Expect = 1.7e-106
Identity = 207/232 (89.22%), Postives = 212/232 (91.38%), Query Frame = 0


Query: 1   MLMATNLSFSPHQTLIPLQKPLLSPRVHLRRFVHLNSVSRIPSSRLRSGSHSRVLVRAAL 60
           MLMA NLSFSPH +LIP QKP L PR  L RF+ LNSVSRI + RLRSGS S VLVRAAL
Sbjct: 1   MLMAINLSFSPH-SLIPFQKPSLLPRHELGRFLQLNSVSRISNVRLRSGSQSGVLVRAAL 60

Query: 61  DSDYSPRRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM 120
           DSDYS +RSSSNE+RET MLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM
Sbjct: 61  DSDYSSKRSSSNEERETFMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM 120

Query: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180
           EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING
Sbjct: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180

Query: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPE--KPRQQA-TRTESNSG 230
           EIIPSKYPVYEPKKRRETKYESRRYERKRDGP PE  KPR QA TRTESNSG
Sbjct: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPSPEQRKPRPQATTRTESNSG 231

[Close]

BLAST of Sed0016262.1 vs. NCBI nr
Match: XP_023521912.1 (multiple organellar RNA editing factor 9, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 392.9 bits (1008), Expect = 1.9e-105
Identity = 203/230 (88.26%), Postives = 210/230 (91.30%), Query Frame = 0


Query: 1   MLMATNLSFSPHQTLIPLQKPLLSPRVHLRRFVHLNSVSRIPSSRLRSGSHSRVLVRAAL 60
           MLMAT+LS SP Q+LIPLQKP L PRV    F+ L SVSRI S+R+ SGS S VLVRAAL
Sbjct: 1   MLMATSLSVSP-QSLIPLQKPSLLPRVQQGHFLQLKSVSRISSARIHSGSQSGVLVRAAL 60

Query: 61  DSDYSPRRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM 120
           DSDYS  RSSSNE+RE IMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM
Sbjct: 61  DSDYSSERSSSNEKREEIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM 120

Query: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180
           EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSY+DVKNKDYGGDKYING
Sbjct: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYLDVKNKDYGGDKYING 180

Query: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPE--KPRQQATRTESNS 229
           EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPE  KPR QATRTESNS
Sbjct: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRKPRPQATRTESNS 229

[Close]

BLAST of Sed0016262.1 vs. ExPASy Swiss-Prot
Match: Q9LPZ1 (Multiple organellar RNA editing factor 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MORF9 PE=1 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.1e-82
Identity = 163/231 (70.56%), Postives = 183/231 (79.22%), Query Frame = 0


Query: 8   SFSPHQTLIPLQKPLLSPRVHLRRFVHLNSV----SRIPSSR--LRSGSHSRVLV--RAA 67
           SF+   +   L K LL P  HL RF  L+ +    S  P  R    +GS  RV +   A 
Sbjct: 3   SFTTTSSSSLLLKTLL-PVSHLNRFSTLSGIRVGDSWTPLLRNISTAGSRRRVAIVKAAT 62

Query: 68  LDSDYSPRRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGS 127
           +DSDYS +RS+SNEQRETIMLPGCDYNHWLIVMEFPKDPAP+R+QMIDTYLNTLATVLGS
Sbjct: 63  VDSDYSSKRSNSNEQRETIMLPGCDYNHWLIVMEFPKDPAPSRDQMIDTYLNTLATVLGS 122

Query: 128 MEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYIN 187
           MEEAKKNMYAFSTTTYTGFQCT+ EETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYIN
Sbjct: 123 MEEAKKNMYAFSTTTYTGFQCTIDEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYIN 182

Query: 188 GEIIPSKYPVYEPKKRRETKYESRRYERKRDGPPP---EKPRQQATRTESN 228
           GEIIP  YP Y+PK+R  TKY+S+RYERKRDGPPP    KPRQ+   ++S+
Sbjct: 183 GEIIPCTYPTYQPKQRNNTKYQSKRYERKRDGPPPPEQRKPRQEPAASDSS 232

[Close]

BLAST of Sed0016262.1 vs. ExPASy Swiss-Prot
Match: Q38732 (DAG protein, chloroplastic OS=Antirrhinum majus OX=4151 GN=DAG PE=2 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 7.1e-79
Identity = 159/234 (67.95%), Postives = 185/234 (79.06%), Query Frame = 0


Query: 3   MAT-NLSFSPHQTLIPLQKPLLSPRVHLRRFVHLNSVSRIPSSR---LRSGSHSRVLVRA 62
           MAT NLS  P +TL P  K L      L   +  +S+S +P +R   ++S S +   VRA
Sbjct: 1   MATINLSLLP-KTLTPNSKTL----APLLSILSTSSLSFLPCTRPHPIKSRSAAYPTVRA 60

Query: 63  ALDSDYSPRRSSSN----EQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLA 122
             D +YS RR+++N    E+RETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLA
Sbjct: 61  LTDGEYSSRRNNNNNNSGEERETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLA 120

Query: 123 TVLGSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGG 182
           TVLGSMEEAKKNMYAFSTTTYTGFQCTV+EETSEKFKGLPGVLWVLPDSYIDVKNKDYGG
Sbjct: 121 TVLGSMEEAKKNMYAFSTTTYTGFQCTVTEETSEKFKGLPGVLWVLPDSYIDVKNKDYGG 180

Query: 183 DKYINGEIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPE--KPRQQATRTES 227
           DKY+NGEIIP +YP Y+PK+ R +KY+S+ Y R+RDGPP E  +P+Q+AT   S
Sbjct: 181 DKYVNGEIIPCQYPTYQPKQSRSSKYKSKAYVRQRDGPPAEQRRPKQEATPESS 229

[Close]

BLAST of Sed0016262.1 vs. ExPASy Swiss-Prot
Match: Q84JZ6 (Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF3 PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 5.0e-40
Identity = 98/207 (47.34%), Postives = 124/207 (59.90%), Query Frame = 0


Query: 18  LQKPLLSPRVHLRRFVHLNSVSRIPSSRLRSGSHSRVLVRAAL--------DSDYSPRRS 77
           L K L S   +   F  L+S SR     +   S SR  +             S YSP   
Sbjct: 14  LNKTLSSSTSYSSSFPTLSSRSRFAMPLIEKVSSSRTSLGPCYISTRPKTSGSGYSPLND 73

Query: 78  -----SSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAK 137
                S+   +ETI+L GCDY HWLIVMEF  DP PT E+MI++Y+ TL +VLG  EEAK
Sbjct: 74  PSPNWSNRPPKETILLDGCDYEHWLIVMEF-TDPKPTEEEMINSYVKTLTSVLGCEEEAK 133

Query: 138 KNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIP 197
           K +Y+  T+TYTGF   +SEE S K K LPGVLWVLPDSY+DV NKDYGGD Y+ G++IP
Sbjct: 134 KKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVPNKDYGGDLYVEGKVIP 193

Query: 198 SKYPVYEPKKRRETKYESR-RYERKRD 211
              P Y   ++R T+   R RY+R+R+
Sbjct: 194 R--PQYRFTEQRHTRPRPRPRYDRRRE 217

[Close]

BLAST of Sed0016262.1 vs. ExPASy Swiss-Prot
Match: O22793 (Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MORF2 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.8e-34
Identity = 96/212 (45.28%), Postives = 120/212 (56.60%), Query Frame = 0


Query: 23  LSPRVHLRRF----VHLNSVSRIPSSRLRSGSHSRVLVR--------AALDSDYSPRRSS 82
           LS   HL R     V L +  RIPSS    GS      R            S YSP  S 
Sbjct: 5   LSGTRHLTRALLSNVTLMAPPRIPSSVHYGGSRLGCSTRFFSIRCGANRSGSTYSPLNSG 64

Query: 83  SN--EQRETIM---LPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKK 142
           SN  ++  T M    PGCDY HWLIVM+ P     T++QMID Y+ TLA V+GS EEAKK
Sbjct: 65  SNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKK 124

Query: 143 NMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEII-- 202
            +Y  S   Y GF C + EETS K +GLPGVL+VLPDSY+D +NKDYG + ++NGEI+  
Sbjct: 125 RIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQR 184

Query: 203 -PSKYPVYEPKKRR---ETKYESR-RYERKRD 211
            P +    EP+ +R     +Y  R RY R+R+
Sbjct: 185 SPERQRRVEPQPQRAQDRPRYNDRTRYSRRRE 216

[Close]

BLAST of Sed0016262.1 vs. ExPASy Swiss-Prot
Match: O82169 (Multiple organellar RNA editing factor 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF6 PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.7e-32
Identity = 69/137 (50.36%), Postives = 91/137 (66.42%), Query Frame = 0


Query: 56  VRAALD---SDYSPRRSSSN--EQRETIM---LPGCDYNHWLIVMEFPKDPAPTREQMID 115
           +R  +D     YSP +S SN  ++  T M    PGCDY HWLIVME P      ++QMID
Sbjct: 59  IRTRMDRSGGSYSPLKSGSNFSDRPPTEMAPLFPGCDYEHWLIVMEKPGGENAQKQQMID 118

Query: 116 TYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDV 175
            Y+ TLA ++GS EEA+K +Y  S   Y GF C + EETS K +GLPGVL+VLPDSY+D 
Sbjct: 119 CYVQTLAKIVGSEEEARKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDP 178

Query: 176 KNKDYGGDKYINGEIIP 185
           + KDYG + ++NGE++P
Sbjct: 179 EFKDYGAELFVNGEVVP 195

[Close]

BLAST of Sed0016262.1 vs. ExPASy TrEMBL
Match: A0A5A7V8E4 (DAG protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold977G00330 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.6e-110
Identity = 210/231 (90.91%), Postives = 216/231 (93.51%), Query Frame = 0


Query: 1   MLMATNLSFSPHQTLIPLQKPLLSPRVHLRRFVHLNSVSRIPSSRLRSGSHSRVLVRAAL 60
           MLMATNLSFSP Q+LIPLQKP L  RV L  F+HLNSVS+I ++RL SGS SRVLVRAAL
Sbjct: 1   MLMATNLSFSP-QSLIPLQKPSLLQRVQLGHFLHLNSVSQISTARLHSGSQSRVLVRAAL 60

Query: 61  DSDYSPRRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM 120
           DSDYS +RSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM
Sbjct: 61  DSDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM 120

Query: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180
           EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING
Sbjct: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180

Query: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPE--KPRQQATRTESNSG 230
           EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPE  KPR Q TRTESNSG
Sbjct: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRKPRPQPTRTESNSG 230

[Close]

BLAST of Sed0016262.1 vs. ExPASy TrEMBL
Match: A0A1S3C092 (multiple organellar RNA editing factor 9, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103494977 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.6e-110
Identity = 210/231 (90.91%), Postives = 216/231 (93.51%), Query Frame = 0


Query: 1   MLMATNLSFSPHQTLIPLQKPLLSPRVHLRRFVHLNSVSRIPSSRLRSGSHSRVLVRAAL 60
           MLMATNLSFSP Q+LIPLQKP L  RV L  F+HLNSVS+I ++RL SGS SRVLVRAAL
Sbjct: 1   MLMATNLSFSP-QSLIPLQKPSLLQRVQLGHFLHLNSVSQISTARLHSGSQSRVLVRAAL 60

Query: 61  DSDYSPRRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM 120
           DSDYS +RSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM
Sbjct: 61  DSDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM 120

Query: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180
           EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING
Sbjct: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180

Query: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPE--KPRQQATRTESNSG 230
           EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPE  KPR Q TRTESNSG
Sbjct: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRKPRPQPTRTESNSG 230

[Close]

BLAST of Sed0016262.1 vs. ExPASy TrEMBL
Match: A0A6J1FAS7 (multiple organellar RNA editing factor 9, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111443624 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 9.2e-106
Identity = 205/232 (88.36%), Postives = 210/232 (90.52%), Query Frame = 0


Query: 1   MLMATNLSFSPHQTLIPLQKPLLSPRVHLRRFVHLNSVSRIPSSRLRSGSHSRVLVRAAL 60
           MLMA NLSFSPH +LIP QKP L PR  L RF+ L SVSRI + RLRSGS S VLVRA L
Sbjct: 1   MLMAVNLSFSPH-SLIPFQKPSLLPRHELGRFLQLKSVSRISNVRLRSGSQSGVLVRAGL 60

Query: 61  DSDYSPRRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM 120
           DSDYS +RSSSNE+RET MLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM
Sbjct: 61  DSDYSSKRSSSNEERETFMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM 120

Query: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180
           EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING
Sbjct: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180

Query: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPE--KPRQQA-TRTESNSG 230
           EIIPSKYPVYEPKKRRETKYESRRYERKRDGP PE  KPR QA TRTESNSG
Sbjct: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPSPEQRKPRPQATTRTESNSG 231

[Close]

BLAST of Sed0016262.1 vs. ExPASy TrEMBL
Match: A0A6J1CDW8 (multiple organellar RNA editing factor 9, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111010589 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.6e-105
Identity = 203/230 (88.26%), Postives = 213/230 (92.61%), Query Frame = 0


Query: 1   MLMATNLSFSPHQTLIPLQKPLLSPRVHLRRFVHLNSVSRIPSSRLRSGSHSRVLVRAAL 60
           MLMATNLSFSP Q+LIPLQKP L PR  L  F++LNSVSRI S+RL S S S +LVRAAL
Sbjct: 1   MLMATNLSFSP-QSLIPLQKPSLLPRAQLGHFLNLNSVSRISSARLHSASRSGLLVRAAL 60

Query: 61  DSDYSPRRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM 120
           DSDYS +RSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM
Sbjct: 61  DSDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM 120

Query: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180
           EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING
Sbjct: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180

Query: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPE-KPRQQATRTESNSG 230
           EIIPSKYPVYEPKKRRE+KYESRRYER++DGPP + KPR QATRTE NSG
Sbjct: 181 EIIPSKYPVYEPKKRRESKYESRRYERRKDGPPEQRKPRPQATRTE-NSG 228

[Close]

BLAST of Sed0016262.1 vs. ExPASy TrEMBL
Match: A0A6J1IJV4 (multiple organellar RNA editing factor 9, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111476928 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 2.7e-105
Identity = 204/232 (87.93%), Postives = 210/232 (90.52%), Query Frame = 0


Query: 1   MLMATNLSFSPHQTLIPLQKPLLSPRVHLRRFVHLNSVSRIPSSRLRSGSHSRVLVRAAL 60
           MLMA NLSFSPH +LIP QKP L P   L  F+ LNSVSRI + RLRSG+ S VLVRAAL
Sbjct: 1   MLMAINLSFSPH-SLIPFQKPSLLPHHELGHFLQLNSVSRISNVRLRSGAQSGVLVRAAL 60

Query: 61  DSDYSPRRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM 120
           DSDYS +RSSSNE+RET MLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM
Sbjct: 61  DSDYSSKRSSSNEERETFMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSM 120

Query: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180
           EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING
Sbjct: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180

Query: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPE--KPRQQA-TRTESNSG 230
           EIIPSKYPVYEPKKRRETKYESRRYERKRDGP PE  KPR QA TRTESNSG
Sbjct: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPSPEQRKPRPQATTRTESNSG 231

[Close]

BLAST of Sed0016262.1 vs. TAIR 10
Match: AT1G11430.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 307.8 bits (787), Expect = 7.5e-84
Identity = 163/231 (70.56%), Postives = 183/231 (79.22%), Query Frame = 0


Query: 8   SFSPHQTLIPLQKPLLSPRVHLRRFVHLNSV----SRIPSSR--LRSGSHSRVLV--RAA 67
           SF+   +   L K LL P  HL RF  L+ +    S  P  R    +GS  RV +   A 
Sbjct: 3   SFTTTSSSSLLLKTLL-PVSHLNRFSTLSGIRVGDSWTPLLRNISTAGSRRRVAIVKAAT 62

Query: 68  LDSDYSPRRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGS 127
           +DSDYS +RS+SNEQRETIMLPGCDYNHWLIVMEFPKDPAP+R+QMIDTYLNTLATVLGS
Sbjct: 63  VDSDYSSKRSNSNEQRETIMLPGCDYNHWLIVMEFPKDPAPSRDQMIDTYLNTLATVLGS 122

Query: 128 MEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYIN 187
           MEEAKKNMYAFSTTTYTGFQCT+ EETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYIN
Sbjct: 123 MEEAKKNMYAFSTTTYTGFQCTIDEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYIN 182

Query: 188 GEIIPSKYPVYEPKKRRETKYESRRYERKRDGPPP---EKPRQQATRTESN 228
           GEIIP  YP Y+PK+R  TKY+S+RYERKRDGPPP    KPRQ+   ++S+
Sbjct: 183 GEIIPCTYPTYQPKQRNNTKYQSKRYERKRDGPPPPEQRKPRQEPAASDSS 232

[Close]

BLAST of Sed0016262.1 vs. TAIR 10
Match: AT3G06790.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 166.0 bits (419), Expect = 3.5e-41
Identity = 98/207 (47.34%), Postives = 124/207 (59.90%), Query Frame = 0


Query: 18  LQKPLLSPRVHLRRFVHLNSVSRIPSSRLRSGSHSRVLVRAAL--------DSDYSPRRS 77
           L K L S   +   F  L+S SR     +   S SR  +             S YSP   
Sbjct: 14  LNKTLSSSTSYSSSFPTLSSRSRFAMPLIEKVSSSRTSLGPCYISTRPKTSGSGYSPLND 73

Query: 78  -----SSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAK 137
                S+   +ETI+L GCDY HWLIVMEF  DP PT E+MI++Y+ TL +VLG  EEAK
Sbjct: 74  PSPNWSNRPPKETILLDGCDYEHWLIVMEF-TDPKPTEEEMINSYVKTLTSVLGWQEEAK 133

Query: 138 KNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIP 197
           K +Y+  T+TYTGF   +SEE S K K LPGVLWVLPDSY+DV NKDYGGD Y+ G++IP
Sbjct: 134 KKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVPNKDYGGDLYVEGKVIP 193

Query: 198 SKYPVYEPKKRRETKYESR-RYERKRD 211
              P Y   ++R T+   R RY+R+R+
Sbjct: 194 R--PQYRFTEQRHTRPRPRPRYDRRRE 217

[Close]

BLAST of Sed0016262.1 vs. TAIR 10
Match: AT3G06790.2 (plastid developmental protein DAG, putative )

HSP 1 Score: 166.0 bits (419), Expect = 3.5e-41
Identity = 98/207 (47.34%), Postives = 124/207 (59.90%), Query Frame = 0


Query: 18  LQKPLLSPRVHLRRFVHLNSVSRIPSSRLRSGSHSRVLVRAAL--------DSDYSPRRS 77
           L K L S   +   F  L+S SR     +   S SR  +             S YSP   
Sbjct: 14  LNKTLSSSTSYSSSFPTLSSRSRFAMPLIEKVSSSRTSLGPCYISTRPKTSGSGYSPLND 73

Query: 78  -----SSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAK 137
                S+   +ETI+L GCDY HWLIVMEF  DP PT E+MI++Y+ TL +VLG  EEAK
Sbjct: 74  PSPNWSNRPPKETILLDGCDYEHWLIVMEF-TDPKPTEEEMINSYVKTLTSVLGCEEEAK 133

Query: 138 KNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIP 197
           K +Y+  T+TYTGF   +SEE S K K LPGVLWVLPDSY+DV NKDYGGD Y+ G++IP
Sbjct: 134 KKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVPNKDYGGDLYVEGKVIP 193

Query: 198 SKYPVYEPKKRRETKYESR-RYERKRD 211
              P Y   ++R T+   R RY+R+R+
Sbjct: 194 R--PQYRFTEQRHTRPRPRPRYDRRRE 217

[Close]

BLAST of Sed0016262.1 vs. TAIR 10
Match: AT2G33430.1 (differentiation and greening-like 1 )

HSP 1 Score: 147.5 bits (371), Expect = 1.3e-35
Identity = 96/212 (45.28%), Postives = 120/212 (56.60%), Query Frame = 0


Query: 23  LSPRVHLRRF----VHLNSVSRIPSSRLRSGSHSRVLVR--------AALDSDYSPRRSS 82
           LS   HL R     V L +  RIPSS    GS      R            S YSP  S 
Sbjct: 5   LSGTRHLTRALLSNVTLMAPPRIPSSVHYGGSRLGCSTRFFSIRCGANRSGSTYSPLNSG 64

Query: 83  SN--EQRETIM---LPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKK 142
           SN  ++  T M    PGCDY HWLIVM+ P     T++QMID Y+ TLA V+GS EEAKK
Sbjct: 65  SNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKK 124

Query: 143 NMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEII-- 202
            +Y  S   Y GF C + EETS K +GLPGVL+VLPDSY+D +NKDYG + ++NGEI+  
Sbjct: 125 RIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQR 184

Query: 203 -PSKYPVYEPKKRR---ETKYESR-RYERKRD 211
            P +    EP+ +R     +Y  R RY R+R+
Sbjct: 185 SPERQRRVEPQPQRAQDRPRYNDRTRYSRRRE 216

[Close]

BLAST of Sed0016262.1 vs. TAIR 10
Match: AT2G35240.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 141.0 bits (354), Expect = 1.2e-33
Identity = 69/137 (50.36%), Postives = 91/137 (66.42%), Query Frame = 0


Query: 56  VRAALD---SDYSPRRSSSN--EQRETIM---LPGCDYNHWLIVMEFPKDPAPTREQMID 115
           +R  +D     YSP +S SN  ++  T M    PGCDY HWLIVME P      ++QMID
Sbjct: 59  IRTRMDRSGGSYSPLKSGSNFSDRPPTEMAPLFPGCDYEHWLIVMEKPGGENAQKQQMID 118

Query: 116 TYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDV 175
            Y+ TLA ++GS EEA+K +Y  S   Y GF C + EETS K +GLPGVL+VLPDSY+D 
Sbjct: 119 CYVQTLAKIVGSEEEARKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDP 178

Query: 176 KNKDYGGDKYINGEIIP 185
           + KDYG + ++NGE++P
Sbjct: 179 EFKDYGAELFVNGEVVP 195

The following BLAST results are available for this feature:

BLAST of Sed0016262.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151975.1	3.4e-110	90.91	multiple organellar RNA editing factor 9, chloroplastic [Cucumis sativus] >XP_00...	[more]
XP_038900065.1	5.4e-108	90.48	multiple organellar RNA editing factor 9, chloroplastic [Benincasa hispida]	[more]
XP_023535131.1	1.3e-106	89.22	multiple organellar RNA editing factor 9, chloroplastic-like [Cucurbita pepo sub...	[more]
KAG6592006.1	1.7e-106	89.22	Multiple organellar RNA editing factor 9, chloroplastic, partial [Cucurbita argy...	[more]
XP_023521912.1	1.9e-105	88.26	multiple organellar RNA editing factor 9, chloroplastic-like [Cucurbita pepo sub...	[more]

BLAST of Sed0016262.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LPZ1	1.1e-82	70.56	Multiple organellar RNA editing factor 9, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q38732	7.1e-79	67.95	DAG protein, chloroplastic OS=Antirrhinum majus OX=4151 GN=DAG PE=2 SV=1	[more]
Q84JZ6	5.0e-40	47.34	Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana ...	[more]
O22793	1.8e-34	45.28	Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana ...	[more]
O82169	1.7e-32	50.36	Multiple organellar RNA editing factor 6, mitochondrial OS=Arabidopsis thaliana ...	[more]

BLAST of Sed0016262.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V8E4	1.6e-110	90.91	DAG protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold977G00330 PE...	[more]
A0A1S3C092	1.6e-110	90.91	multiple organellar RNA editing factor 9, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
A0A6J1FAS7	9.2e-106	88.36	multiple organellar RNA editing factor 9, chloroplastic-like OS=Cucurbita moscha...	[more]
A0A6J1CDW8	1.6e-105	88.26	multiple organellar RNA editing factor 9, chloroplastic OS=Momordica charantia O...	[more]
A0A6J1IJV4	2.7e-105	87.93	multiple organellar RNA editing factor 9, chloroplastic-like OS=Cucurbita maxima...	[more]

BLAST of Sed0016262.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11430.1	7.5e-84	70.56	plastid developmental protein DAG, putative	[more]
AT3G06790.1	3.5e-41	47.34	plastid developmental protein DAG, putative	[more]
AT3G06790.2	3.5e-41	47.34	plastid developmental protein DAG, putative	[more]
AT2G33430.1	1.3e-35	45.28	differentiation and greening-like 1	[more]
AT2G35240.1	1.2e-33	50.36	plastid developmental protein DAG, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037045	Peptidase S8 propeptide/proteinase inhibitor I9 superfamily	GENE3D	3.30.70.80	Peptidase S8 propeptide/proteinase inhibitor I9	coord: 82..167 e-value: 1.2E-6 score: 30.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..229
None	No IPR available	PANTHER	PTHR31346:SF3	MULTIPLE ORGANELLAR RNA EDITING FACTOR 9, CHLOROPLASTIC	coord: 34..228
IPR039206	MORF/ORRM1/DAG-like	PANTHER	PTHR31346	MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED	coord: 34..228

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0016262	Sed0016262	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0016262.1-five_prime_utr	Sed0016262.1-five_prime_utr-LG07:41893440..41893478	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0016262.1-exon	Sed0016262.1-exon-LG07:41893440..41893834	exon
Sed0016262.1-exon	Sed0016262.1-exon-LG07:41894981..41895078	exon
Sed0016262.1-exon	Sed0016262.1-exon-LG07:41895170..41895235	exon
Sed0016262.1-exon	Sed0016262.1-exon-LG07:41895581..41896133	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0016262.1-cds	Sed0016262.1-cds-LG07:41893479..41893834	CDS
Sed0016262.1-cds	Sed0016262.1-cds-LG07:41894981..41895078	CDS
Sed0016262.1-cds	Sed0016262.1-cds-LG07:41895170..41895235	CDS
Sed0016262.1-cds	Sed0016262.1-cds-LG07:41895581..41895750	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0016262.1-three_prime_utr	Sed0016262.1-three_prime_utr-LG07:41895751..41896133	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0016262.1	Sed0016262.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016554	cytidine to uridine editing
biological_process	GO:0006397	mRNA processing