Sed0015292.2 (mRNA) Chayote v1

Overview


Name	Sed0015292.2
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	DUF4228 domain-containing protein
Location	LG08: 865719 .. 869345 (+)
Sequence length	1324
RNA-Seq Expression	Sed0015292.2
Synteny	Sed0015292.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGGCACTTGAAGAACAAACTTTATTATTATTTTTTCTTTTCTTTGAATCAGCCCAGCATGGTTCCAAATTCAAAGAGGCAGAGCATGGCAACTTTTTTCTGTCAAATCTCATGATATTGGCAAAGGCCTGCCATGGATGTTGCAGAAACGTGTTCCGAAAACGCCATTTTCGAATCCGGTAACGTTTCTTTTAATTTTTTCGCATTATTCTTCTCTCGTTTTTCCCAATCTTTCCACAGATTTCAGCATTTAGGGTTTCGATTTCCTCGATCGATTCAATTAGCTCAAGAATCGTTTCCTGTTCTGTACGATTTCAATTTTGTTGAGAGATCCTTTGCTTAGGTTAAAAAAAACCAGAAGAAGAATTGGAAGAAGCTTTTTGGGCAGTAAAGGCTGAGATGGATGGAGGCTTTATGGAAAAGGGTAAATTTTTTCCTTTTTGAAAGGGAAATGGTTGTAATGAATAGATAGAGCCTTGTAATGTAATGCACAACCAAACAGAAAAAAAGGAGAAAACGTTAAAGAATTTGTCTGAATCCCCCTTTGATGCGACATCACTCATTATACTGTTGCTTTGGGCTTGTAATGTTTCATTGTTTTATTTTACCCTCTTTTTTTTCTGAACTTGGTTGTTTGGTTGAAAGCTTAATTTAATTGCTCTGTTAGGGGCGTTTGAGGTAAGGGGAATAGGATTAAACATGTGGGAAAATGATAAAATATTTGTGTTAGAGGTGAATGAATGGTTACGTGGGGGACCGTTACCTACATTTGGACGGCATATAATGATTATGGTAAACCATTACTTCATTTGAGATGCATAAAATGATTATGAGGAACAAAATAGTAAGCATGAGGAAAATGAATATTGGTTATGGGTGAATGTGAACACGGGGGAAAATGATTAAGTATAGGAGACGATTTGTCATTTGTGCTTGGGGCGAATGGAATGGTTACGGGAGACTGTTGCCTGTATTTGGGGTGCATATAATGATTGTGGTAAACTATTACCTTGTTAGGAGTGCATAAAGCGATTATGAGAAACAAAATAGTGAGTACGAGGAAAATGAAAATTGGTTGAGAGAATGAAAAGTGGTTAAGGGAATAATGAGATTGTGAGAAATGAATAGTGATTATGAGAATGATTTATGGTGGCCCAAATGTGGGTAAATTAATTATTTGCCAAATGTCGGTGGCCCCGGTTTGATCCTCTTGCCCCAAACACCTCTTAAGGTTTATTTTACTCTTTTGAGTGAGAATTTTGACTCTGTACTAAAGGAAATGTGTGTTTATGGGTTGGATTTAGAGGTGCTTACAAGCTTTTTCACCTCCAATTCTGGTCTTTTTCTTGTAGGCTACTGTGAGAACTACTCCCAGTTGTGTAATCCAACGAGAATCACTAGAACTAAAGATAATTTAAGTTCCTCCATTCTTTTCGGGGTTGTGGGAACTATTTGACATTTTGTGAAGGAAAACTTTGTCTTCTTTGTGGTCCTGTGGAATCATAACTTTGAGAGCATGACATTCAAATGTATCCATCCCAATTCATTAATTAATATTCATATATTCTTTTTTTTCATTTTCAAAGTGGTGGTCTCACTTTGAATTCCCATTTGAATTGATGGAGGGTATAAAAAATACCCAAATGGAAAAAGAGAAAATTATTGAGGGTGGAGAGAGATAAGAGAAGAGGAAAGTGATGAGAGAGAATGTATTCATCATGTAATGTACATATCAAGACTTGAGGCTGTATTTTCACCTTTGGCACCAGATACTCTGTTCCTCCACCCACCCAATCATAGCTCAACACCTCATAACTTGTTGGACAACAATACCCCTCTTTATCACCTGAGTATCTCTTTTAAGTTTTACCCCCAATATCTTTTAAACAGATAAGAGTTTAAAGCTGCTTGTGAATGAGTGTATCTCTATTCTCTATTGGCTATAAAACTAGATTGATCCTCTCTTCACAGCCTCCCCTCTTGCTTATTCATTATCCTCATTTCTTACAATTTCAACACCAGTAGAGAGAGATGGGAAATTGCCAAGCCATTGATGCAGCAACACTTGTGATACAACACCCAAGTGGGAAAGCAGACAAATTGTATTGGCCTGTGACTGCTAGAGAGATCATGAAGATGAACCCTGGTCATTATGTTGCTCTTCTCATCTCCACCACAATGTTTACACCAAATGAAAGTAATAACAACAATGAAACTAGCAAGGTTGAGAAAAAAGAAAACGAAACTAGTAGTAATTCGGTTCGTTTAACTCGAATCAAGCTTCTTCGCCCGGCTGACACCCTTGTTCTTGGTCAAGTTTACAGGCTCATCACTTCTAAAGGTCAGTTTTATCTATATCTACCTTTCCTCCTCTTGTTTCTGTCTATTTTTTTTTCATATACAGCCTTGAAATCTCTTAATTTTTAGTCTGAATTTGAATTAATGGCTTCATTTTCTTTGTGGGTTTCAGAAGTTATGAAAGGTTTATCGGCAAAGAAACAAGAAAAGGTTAAACTAAGCCAGTTAGAAGCAGCAGAGAAATCGCAAAGGAGGAAAGAACGTACAACCAGAATGTCAGATTCAGTAGCAGCAGCTGGAAGATCTGTAACTGAAGATTCTGTTCAGGTGAATTTTTACAACAAACATCAAAACAATTCTTAATTTTGAAGGAAGTTCTTAGGCAAATGTTCTCTGTTTTCAATTGATTTCATTATAATACTTTCTGAACAAACCATACCCAAGGGACGGCCTCGATGCGAGGCCTGAGTTTTCAAGGTATGGTTCCTTGGAGGTCATAAGTTCAAAACTCGCGAGTAAGTTTAACTGTAAAATCTATTGTTGTTTTCTGGGTCTGGACCCTAGGACGGGTGCAGTTGTTCCTAATTATGCATGGGAGCGAAACTCTGATTCCCGATTAAAAAAATACCTTCTAAATGAATTGTATAATTTTTTGTAGGCGACCAAACACGAGAAGAACAACAGACCAAGGACAAGTACATCGACAACCTCGGCCATAGCCAGGTCAAGAACATGGCAGCCTTCATTACATAGCATTTCAGAAGCTGCTAGCTAATCATTTATGTTCCCTATTCCCCACATGCTATTAAGAGACAGTGTGGCACAGATTGTTCTAAGCTCTTTAAACTTCTCCAAAGGAAAAGAAAAAAAAAGGGGAGTTTGGAGAAAGTGAAAAACAAATAAAGGAGAGAAGCCAAATGTCCTTTTGAATTCAAGAAGAGAAATTCCAACACATTGCTGATATTAGGATGGTGGCTGTAAAAGGTTTGTTTATTAAAGCTTTTATCTTCAAATGCAGATCTTGGAGAAAAAAGAGCATAAAAATGTGCATAGGGAAAAAAGCAGGGTGGGTTTATAGTGCTAAGGAGTTGAGATTCTTCAAACATCTTTGTAAATTCAAAGTCCTTTGTAGTAATGGAAACTGGAGTTGTGCAAAAAGAACTCAGTTTTTATTACCATTCTGTTTCACTCTTTTAACCTTTTCATAGTTTCATCTGTTTTTGCAGATTAGACAAAGTGTTTATGCCTCTTACTTTGTTTTTTCTGTTGAGTTTAACCAGTAAATCTCGTATAACTTAATAACTATTTCCAACAAATTTTATATAAAG

mRNA sequence

GTGGGCACTTGAAGAACAAACTTTATTATTATTTTTTCTTTTCTTTGAATCAGCCCAGCATGGTTCCAAATTCAAAGAGGCAGAGCATGGCAACTTTTTTCTGTCAAATCTCATGATATTGGCAAAGGCCTGCCATGGATGTTGCAGAAACGTGTTCCGAAAACGCCATTTTCGAATCCGTAGAGAGAGATGGGAAATTGCCAAGCCATTGATGCAGCAACACTTGTGATACAACACCCAAGTGGGAAAGCAGACAAATTGTATTGGCCTGTGACTGCTAGAGAGATCATGAAGATGAACCCTGGTCATTATGTTGCTCTTCTCATCTCCACCACAATGTTTACACCAAATGAAAGTAATAACAACAATGAAACTAGCAAGGTTGAGAAAAAAGAAAACGAAACTAGTAGTAATTCGGTTCGTTTAACTCGAATCAAGCTTCTTCGCCCGGCTGACACCCTTGTTCTTGGTCAAGTTTACAGGCTCATCACTTCTAAAGAAGTTATGAAAGGTTTATCGGCAAAGAAACAAGAAAAGGTTAAACTAAGCCAGTTAGAAGCAGCAGAGAAATCGCAAAGGAGGAAAGAACGTACAACCAGAATGTCAGATTCAGTAGCAGCAGCTGGAAGATCTGTAACTGAAGATTCTGTTCAGGCGACCAAACACGAGAAGAACAACAGACCAAGGACAAGTACATCGACAACCTCGGCCATAGCCAGGTCAAGAACATGGCAGCCTTCATTACATAGCATTTCAGAAGCTGCTAGCTAATCATTTATGTTCCCTATTCCCCACATGCTATTAAGAGACAGTGTGGCACAGATTGTTCTAAGCTCTTTAAACTTCTCCAAAGGAAAAGAAAAAAAAAGGGGAGTTTGGAGAAAGTGAAAAACAAATAAAGGAGAGAAGCCAAATGTCCTTTTGAATTCAAGAAGAGAAATTCCAACACATTGCTGATATTAGGATGGTGGCTGTAAAAGGTTTGTTTATTAAAGCTTTTATCTTCAAATGCAGATCTTGGAGAAAAAAGAGCATAAAAATGTGCATAGGGAAAAAAGCAGGGTGGGTTTATAGTGCTAAGGAGTTGAGATTCTTCAAACATCTTTGTAAATTCAAAGTCCTTTGTAGTAATGGAAACTGGAGTTGTGCAAAAAGAACTCAGTTTTTATTACCATTCTGTTTCACTCTTTTAACCTTTTCATAGTTTCATCTGTTTTTGCAGATTAGACAAAGTGTTTATGCCTCTTACTTTGTTTTTTCTGTTGAGTTTAACCAGTAAATCTCGTATAACTTAATAACTATTTCCAACAAATTTTATATAAAG

Coding sequence (CDS)

ATGGGAAATTGCCAAGCCATTGATGCAGCAACACTTGTGATACAACACCCAAGTGGGAAAGCAGACAAATTGTATTGGCCTGTGACTGCTAGAGAGATCATGAAGATGAACCCTGGTCATTATGTTGCTCTTCTCATCTCCACCACAATGTTTACACCAAATGAAAGTAATAACAACAATGAAACTAGCAAGGTTGAGAAAAAAGAAAACGAAACTAGTAGTAATTCGGTTCGTTTAACTCGAATCAAGCTTCTTCGCCCGGCTGACACCCTTGTTCTTGGTCAAGTTTACAGGCTCATCACTTCTAAAGAAGTTATGAAAGGTTTATCGGCAAAGAAACAAGAAAAGGTTAAACTAAGCCAGTTAGAAGCAGCAGAGAAATCGCAAAGGAGGAAAGAACGTACAACCAGAATGTCAGATTCAGTAGCAGCAGCTGGAAGATCTGTAACTGAAGATTCTGTTCAGGCGACCAAACACGAGAAGAACAACAGACCAAGGACAAGTACATCGACAACCTCGGCCATAGCCAGGTCAAGAACATGGCAGCCTTCATTACATAGCATTTCAGAAGCTGCTAGCTAA

Protein sequence

MGNCQAIDAATLVIQHPSGKADKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETSSNSVRLTRIKLLRPADTLVLGQVYRLITSKEVMKGLSAKKQEKVKLSQLEAAEKSQRRKERTTRMSDSVAAAGRSVTEDSVQATKHEKNNRPRTSTSTTSAIARSRTWQPSLHSISEAAS

Homology

[Close]

BLAST of Sed0015292.2 vs. NCBI nr
Match: XP_022965769.1 (uncharacterized protein LOC111465553 isoform X2 [Cucurbita maxima])

HSP 1 Score: 305.4 bits (781), Expect = 3.4e-79
Identity = 176/205 (85.85%), Postives = 179/205 (87.32%), Query Frame = 0


Query: 1   MGNCQAIDAATLVIQHPSGKADKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNN 60
           MGNCQAIDAATLVIQHPSGK DKLYWPVTAREIMKMNPGHYVALLISTTM TPNES+NNN
Sbjct: 43  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 102

Query: 61  ETSKVEKKENET----------SSNSVRLTRIKLLRPADTLVLGQVYRLITSKEVMKGLS 120
           ETSKVEKKENE           SSNSVRLTRIKLLRPADTLVLGQVYRLITSKEVM GLS
Sbjct: 103 ETSKVEKKENEARKVEKKENEGSSNSVRLTRIKLLRPADTLVLGQVYRLITSKEVMSGLS 162

Query: 121 AKKQEKVKLSQLEAAEKSQRRKERTTRMSDS--VAAAGRSVTEDSVQATKHEKNNRPRTS 180
           AKKQ KVK SQLEAAEK+ RRKER  R SDS   AAAGRSV+ED  QATKHEKNNRPRTS
Sbjct: 163 AKKQAKVKQSQLEAAEKAGRRKERAARGSDSAATAAAGRSVSEDPFQATKHEKNNRPRTS 222

Query: 181 TSTTSAIARSRTWQPSLHSISEAAS 194
           TSTTSAIARSRTWQPSLHSISEA S
Sbjct: 223 TSTTSAIARSRTWQPSLHSISEAGS 247

[Close]

BLAST of Sed0015292.2 vs. NCBI nr
Match: XP_022933526.1 (uncharacterized protein LOC111440926 isoform X2 [Cucurbita moschata])

HSP 1 Score: 305.4 bits (781), Expect = 3.4e-79
Identity = 176/205 (85.85%), Postives = 179/205 (87.32%), Query Frame = 0


Query: 1   MGNCQAIDAATLVIQHPSGKADKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNN 60
           MGNCQAIDAATLVIQHPSGK DKLYWPVTAREIMKMNPGHYVALLISTTM TPNES+NNN
Sbjct: 1   MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 60

Query: 61  ET----------SKVEKKENETSSNSVRLTRIKLLRPADTLVLGQVYRLITSKEVMKGLS 120
           ET          SKVEKKENE SSNSVRLTRIKLLRPADTLVLGQVYRLITSKEVM GLS
Sbjct: 61  ETSKVEKKENEASKVEKKENEASSNSVRLTRIKLLRPADTLVLGQVYRLITSKEVMSGLS 120

Query: 121 AKKQEKVKLSQLEAAEKSQRRKERTTRMSDS--VAAAGRSVTEDSVQATKHEKNNRPRTS 180
           AKKQ KVK SQLEAAEK+ RRKER  R SDS   AAAGRSV+ED  QATKHEKNNRPRTS
Sbjct: 121 AKKQAKVKQSQLEAAEKAGRRKERAARGSDSAAAAAAGRSVSEDPFQATKHEKNNRPRTS 180

Query: 181 TSTTSAIARSRTWQPSLHSISEAAS 194
           TSTTSAIARSRTWQPSLHSISEA S
Sbjct: 181 TSTTSAIARSRTWQPSLHSISEAGS 205

[Close]

BLAST of Sed0015292.2 vs. NCBI nr
Match: KAG6587486.1 (hypothetical protein SDJN03_16051, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021473.1 hypothetical protein SDJN02_15198, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 301.6 bits (771), Expect = 4.9e-78
Identity = 176/215 (81.86%), Postives = 179/215 (83.26%), Query Frame = 0


Query: 1   MGNCQAIDAATLVIQHPSGKADKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNN 60
           MGNCQAIDAATLVIQHPSGK DKLYWPVTAREIMKMNPGHYVALLISTTM TPNES+NNN
Sbjct: 1   MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 60

Query: 61  ETSKVEKKENET--------------------SSNSVRLTRIKLLRPADTLVLGQVYRLI 120
           ETSKVEKKENE                     SSNSVRLTRIKLLRPADTLVLGQVYRLI
Sbjct: 61  ETSKVEKKENEASKVEKKENEASKVEKKENEGSSNSVRLTRIKLLRPADTLVLGQVYRLI 120

Query: 121 TSKEVMKGLSAKKQEKVKLSQLEAAEKSQRRKERTTRMSDS--VAAAGRSVTEDSVQATK 180
           TSKEVM GLSAKKQ KVK SQLEAAEK+ RRKER  R SDS   AAAGRSV+ED  QATK
Sbjct: 121 TSKEVMSGLSAKKQAKVKQSQLEAAEKAGRRKERAARGSDSAAAAAAGRSVSEDPFQATK 180

Query: 181 HEKNNRPRTSTSTTSAIARSRTWQPSLHSISEAAS 194
           HEKNNRPRTSTSTTSAIARSRTWQPSLHSISEA S
Sbjct: 181 HEKNNRPRTSTSTTSAIARSRTWQPSLHSISEAGS 215

[Close]

BLAST of Sed0015292.2 vs. NCBI nr
Match: XP_022933525.1 (uncharacterized protein LOC111440926 isoform X1 [Cucurbita moschata])

HSP 1 Score: 301.6 bits (771), Expect = 4.9e-78
Identity = 176/215 (81.86%), Postives = 179/215 (83.26%), Query Frame = 0


Query: 1   MGNCQAIDAATLVIQHPSGKADKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNN 60
           MGNCQAIDAATLVIQHPSGK DKLYWPVTAREIMKMNPGHYVALLISTTM TPNES+NNN
Sbjct: 1   MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 60

Query: 61  ET--------------------SKVEKKENETSSNSVRLTRIKLLRPADTLVLGQVYRLI 120
           ET                    SKVEKKENE SSNSVRLTRIKLLRPADTLVLGQVYRLI
Sbjct: 61  ETSKVEKKENEASKVEKKENEASKVEKKENEASSNSVRLTRIKLLRPADTLVLGQVYRLI 120

Query: 121 TSKEVMKGLSAKKQEKVKLSQLEAAEKSQRRKERTTRMSDS--VAAAGRSVTEDSVQATK 180
           TSKEVM GLSAKKQ KVK SQLEAAEK+ RRKER  R SDS   AAAGRSV+ED  QATK
Sbjct: 121 TSKEVMSGLSAKKQAKVKQSQLEAAEKAGRRKERAARGSDSAAAAAAGRSVSEDPFQATK 180

Query: 181 HEKNNRPRTSTSTTSAIARSRTWQPSLHSISEAAS 194
           HEKNNRPRTSTSTTSAIARSRTWQPSLHSISEA S
Sbjct: 181 HEKNNRPRTSTSTTSAIARSRTWQPSLHSISEAGS 215

[Close]

BLAST of Sed0015292.2 vs. NCBI nr
Match: XP_022965761.1 (uncharacterized protein LOC111465553 isoform X1 [Cucurbita maxima])

HSP 1 Score: 301.6 bits (771), Expect = 4.9e-78
Identity = 176/215 (81.86%), Postives = 179/215 (83.26%), Query Frame = 0


Query: 1   MGNCQAIDAATLVIQHPSGKADKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNN 60
           MGNCQAIDAATLVIQHPSGK DKLYWPVTAREIMKMNPGHYVALLISTTM TPNES+NNN
Sbjct: 43  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 102

Query: 61  ETSKVEKKENET--------------------SSNSVRLTRIKLLRPADTLVLGQVYRLI 120
           ETSKVEKKENE                     SSNSVRLTRIKLLRPADTLVLGQVYRLI
Sbjct: 103 ETSKVEKKENEARKVEKKENEARKVEKKENEGSSNSVRLTRIKLLRPADTLVLGQVYRLI 162

Query: 121 TSKEVMKGLSAKKQEKVKLSQLEAAEKSQRRKERTTRMSDS--VAAAGRSVTEDSVQATK 180
           TSKEVM GLSAKKQ KVK SQLEAAEK+ RRKER  R SDS   AAAGRSV+ED  QATK
Sbjct: 163 TSKEVMSGLSAKKQAKVKQSQLEAAEKAGRRKERAARGSDSAATAAAGRSVSEDPFQATK 222

Query: 181 HEKNNRPRTSTSTTSAIARSRTWQPSLHSISEAAS 194
           HEKNNRPRTSTSTTSAIARSRTWQPSLHSISEA S
Sbjct: 223 HEKNNRPRTSTSTTSAIARSRTWQPSLHSISEAGS 257

[Close]

BLAST of Sed0015292.2 vs. ExPASy TrEMBL
Match: A0A6J1HRW5 (uncharacterized protein LOC111465553 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465553 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.6e-79
Identity = 176/205 (85.85%), Postives = 179/205 (87.32%), Query Frame = 0


Query: 1   MGNCQAIDAATLVIQHPSGKADKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNN 60
           MGNCQAIDAATLVIQHPSGK DKLYWPVTAREIMKMNPGHYVALLISTTM TPNES+NNN
Sbjct: 43  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 102

Query: 61  ETSKVEKKENET----------SSNSVRLTRIKLLRPADTLVLGQVYRLITSKEVMKGLS 120
           ETSKVEKKENE           SSNSVRLTRIKLLRPADTLVLGQVYRLITSKEVM GLS
Sbjct: 103 ETSKVEKKENEARKVEKKENEGSSNSVRLTRIKLLRPADTLVLGQVYRLITSKEVMSGLS 162

Query: 121 AKKQEKVKLSQLEAAEKSQRRKERTTRMSDS--VAAAGRSVTEDSVQATKHEKNNRPRTS 180
           AKKQ KVK SQLEAAEK+ RRKER  R SDS   AAAGRSV+ED  QATKHEKNNRPRTS
Sbjct: 163 AKKQAKVKQSQLEAAEKAGRRKERAARGSDSAATAAAGRSVSEDPFQATKHEKNNRPRTS 222

Query: 181 TSTTSAIARSRTWQPSLHSISEAAS 194
           TSTTSAIARSRTWQPSLHSISEA S
Sbjct: 223 TSTTSAIARSRTWQPSLHSISEAGS 247

[Close]

BLAST of Sed0015292.2 vs. ExPASy TrEMBL
Match: A0A6J1EZA8 (uncharacterized protein LOC111440926 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111440926 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.6e-79
Identity = 176/205 (85.85%), Postives = 179/205 (87.32%), Query Frame = 0


Query: 1   MGNCQAIDAATLVIQHPSGKADKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNN 60
           MGNCQAIDAATLVIQHPSGK DKLYWPVTAREIMKMNPGHYVALLISTTM TPNES+NNN
Sbjct: 1   MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 60

Query: 61  ET----------SKVEKKENETSSNSVRLTRIKLLRPADTLVLGQVYRLITSKEVMKGLS 120
           ET          SKVEKKENE SSNSVRLTRIKLLRPADTLVLGQVYRLITSKEVM GLS
Sbjct: 61  ETSKVEKKENEASKVEKKENEASSNSVRLTRIKLLRPADTLVLGQVYRLITSKEVMSGLS 120

Query: 121 AKKQEKVKLSQLEAAEKSQRRKERTTRMSDS--VAAAGRSVTEDSVQATKHEKNNRPRTS 180
           AKKQ KVK SQLEAAEK+ RRKER  R SDS   AAAGRSV+ED  QATKHEKNNRPRTS
Sbjct: 121 AKKQAKVKQSQLEAAEKAGRRKERAARGSDSAAAAAAGRSVSEDPFQATKHEKNNRPRTS 180

Query: 181 TSTTSAIARSRTWQPSLHSISEAAS 194
           TSTTSAIARSRTWQPSLHSISEA S
Sbjct: 181 TSTTSAIARSRTWQPSLHSISEAGS 205

[Close]

BLAST of Sed0015292.2 vs. ExPASy TrEMBL
Match: A0A6J1HMJ8 (uncharacterized protein LOC111465553 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465553 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.4e-78
Identity = 176/215 (81.86%), Postives = 179/215 (83.26%), Query Frame = 0


Query: 1   MGNCQAIDAATLVIQHPSGKADKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNN 60
           MGNCQAIDAATLVIQHPSGK DKLYWPVTAREIMKMNPGHYVALLISTTM TPNES+NNN
Sbjct: 43  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 102

Query: 61  ETSKVEKKENET--------------------SSNSVRLTRIKLLRPADTLVLGQVYRLI 120
           ETSKVEKKENE                     SSNSVRLTRIKLLRPADTLVLGQVYRLI
Sbjct: 103 ETSKVEKKENEARKVEKKENEARKVEKKENEGSSNSVRLTRIKLLRPADTLVLGQVYRLI 162

Query: 121 TSKEVMKGLSAKKQEKVKLSQLEAAEKSQRRKERTTRMSDS--VAAAGRSVTEDSVQATK 180
           TSKEVM GLSAKKQ KVK SQLEAAEK+ RRKER  R SDS   AAAGRSV+ED  QATK
Sbjct: 163 TSKEVMSGLSAKKQAKVKQSQLEAAEKAGRRKERAARGSDSAATAAAGRSVSEDPFQATK 222

Query: 181 HEKNNRPRTSTSTTSAIARSRTWQPSLHSISEAAS 194
           HEKNNRPRTSTSTTSAIARSRTWQPSLHSISEA S
Sbjct: 223 HEKNNRPRTSTSTTSAIARSRTWQPSLHSISEAGS 257

[Close]

BLAST of Sed0015292.2 vs. ExPASy TrEMBL
Match: A0A6J1F544 (uncharacterized protein LOC111440926 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111440926 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.4e-78
Identity = 176/215 (81.86%), Postives = 179/215 (83.26%), Query Frame = 0


Query: 1   MGNCQAIDAATLVIQHPSGKADKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNN 60
           MGNCQAIDAATLVIQHPSGK DKLYWPVTAREIMKMNPGHYVALLISTTM TPNES+NNN
Sbjct: 1   MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 60

Query: 61  ET--------------------SKVEKKENETSSNSVRLTRIKLLRPADTLVLGQVYRLI 120
           ET                    SKVEKKENE SSNSVRLTRIKLLRPADTLVLGQVYRLI
Sbjct: 61  ETSKVEKKENEASKVEKKENEASKVEKKENEASSNSVRLTRIKLLRPADTLVLGQVYRLI 120

Query: 121 TSKEVMKGLSAKKQEKVKLSQLEAAEKSQRRKERTTRMSDS--VAAAGRSVTEDSVQATK 180
           TSKEVM GLSAKKQ KVK SQLEAAEK+ RRKER  R SDS   AAAGRSV+ED  QATK
Sbjct: 121 TSKEVMSGLSAKKQAKVKQSQLEAAEKAGRRKERAARGSDSAAAAAAGRSVSEDPFQATK 180

Query: 181 HEKNNRPRTSTSTTSAIARSRTWQPSLHSISEAAS 194
           HEKNNRPRTSTSTTSAIARSRTWQPSLHSISEA S
Sbjct: 181 HEKNNRPRTSTSTTSAIARSRTWQPSLHSISEAGS 215

[Close]

BLAST of Sed0015292.2 vs. ExPASy TrEMBL
Match: A0A0A0LRI4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005650 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.0e-77
Identity = 167/194 (86.08%), Postives = 175/194 (90.21%), Query Frame = 0


Query: 1   MGNCQAIDAATLVIQHPSGKADKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNN 60
           MGNCQAIDAATLVIQHPSGK DKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNN
Sbjct: 1   MGNCQAIDAATLVIQHPSGKEDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNN 60

Query: 61  ETSKVEKKENETSSNSVRLTRIKLLRPADTLVLGQVYRLITSKEVMKGLSAKKQEKVKLS 120
           +TS      NETSSNSVRLTRIKLLRPAD LVLGQVYRLIT++EVMKGLSAKKQ KVK S
Sbjct: 61  QTS------NETSSNSVRLTRIKLLRPADMLVLGQVYRLITTQEVMKGLSAKKQAKVKQS 120

Query: 121 QLEAAEKSQRRKERTTRMSD-SVAAAGRSVTEDSVQATKHEKNNRPRTSTSTTSAIARSR 180
           QLEAA+K  RRK+RTTR SD + AAAGRSV+ED +QA KHEKNNRPRTSTSTTSA ARSR
Sbjct: 121 QLEAADKPDRRKQRTTRSSDAAAAAAGRSVSEDQIQANKHEKNNRPRTSTSTTSATARSR 180

Query: 181 TWQPSLHSISEAAS 194
           TWQPSLHSISEA S
Sbjct: 181 TWQPSLHSISEAGS 188

[Close]

BLAST of Sed0015292.2 vs. TAIR 10
Match: AT1G60010.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10530.1); Has 185 Blast hits to 185 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 180; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 131.3 bits (329), Expect = 8.1e-31
Identity = 86/193 (44.56%), Postives = 117/193 (60.62%), Query Frame = 0


Query: 1   MGNCQAIDAATLVIQHPSGKADKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNN 60
           MGNCQA+DAA LV+QHP GK D+ Y PV+  EIM+M PGHYV+L+I      P ++    
Sbjct: 1   MGNCQAVDAAALVLQHPDGKIDRYYGPVSVSEIMRMYPGHYVSLIIP----LPEKNIPAT 60

Query: 61  ETSKVEKKENETSSNSVRLTRIKLLRPADTLVLGQVYRLITSKEVMKGLSAKKQEKVKLS 120
            T+  +K E +     VR TR+KLLRP + LVLG  YRLITS+EVMK L AKK  K K  
Sbjct: 61  TTTTDDKSERKV----VRFTRVKLLRPTENLVLGHAYRLITSQEVMKVLRAKKYAKTKKH 120

Query: 121 QLEAAEKSQRRKERTTRMSDSVAAAGRSVTEDSVQATKHEKNNRPRTSTSTTSAIARSRT 180
           Q E +++ ++             ++ + + E+S +    E  +  + S  T SA +RS+T
Sbjct: 121 QSETSKEKKK------------PSSEKKIDEESDKNQNLETKDEKQRSVLTNSASSRSKT 173

Query: 181 WQPSLHSISEAAS 194
           W+PSL SISEA S
Sbjct: 181 WRPSLQSISEATS 173

[Close]

BLAST of Sed0015292.2 vs. TAIR 10
Match: AT5G50090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 130.6 bits (327), Expect = 1.4e-30
Identity = 92/193 (47.67%), Postives = 111/193 (57.51%), Query Frame = 0


Query: 1   MGNCQAIDAATLVIQHPSGKADKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNN 60
           MGNCQA+D A +VIQHP+GK +KL  PV+A  +MKMNPGH V+LLISTT  +   S +  
Sbjct: 1   MGNCQAVDTARVVIQHPNGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSGH-- 60

Query: 61  ETSKVEKKENETSSNSVRLTRIKLLRPADTLVLGQVYRLITSKEVMKGLSAKKQEKVKLS 120
                           +RLTRIKLLRP DTLVLG VYRLIT+KEVMKGL AKK  K+K  
Sbjct: 61  -------------GGPLRLTRIKLLRPTDTLVLGHVYRLITTKEVMKGLMAKKCSKLKKE 120

Query: 121 QLEAAEKSQRRKERTTRMSDSVAAAGRSVTEDSVQATKHEKNNRPRTSTSTTSAIARSRT 180
              + +K +  K   +   D+         ED +Q  K EK  R R           SR+
Sbjct: 121 SKGSDDKLEMVKAINSTKLDN---------EDQLQMKKQEK-ERSRI----------SRS 158

Query: 181 WQPSLHSISEAAS 194
           WQPSL SISE  S
Sbjct: 181 WQPSLQSISEGGS 158

[Close]

BLAST of Sed0015292.2 vs. TAIR 10
Match: AT5G50090.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-28
Identity = 85/193 (44.04%), Postives = 109/193 (56.48%), Query Frame = 0


Query: 1   MGNCQAIDAATLVIQHPSGKADKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNN 60
           MGNCQA+D A +VIQHP+GK +KL  PV+A  +MKMNPGH V+LLISTT  +   S +  
Sbjct: 1   MGNCQAVDTARVVIQHPNGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSGH-- 60

Query: 61  ETSKVEKKENETSSNSVRLTRIKLLRPADTLVLGQVYRLITSKEVMKGLSAKKQEKVKLS 120
                           +RLTRIKLLRP DTLVLG VYRLIT+KEVMKGL AKK  K+K  
Sbjct: 61  -------------GGPLRLTRIKLLRPTDTLVLGHVYRLITTKEVMKGLMAKKCSKLKKE 120

Query: 121 QLEAAEKSQRRKERTTRMSDSVAAAGRSVTEDSVQATKHEKNNRPRTSTSTTSAIARSRT 180
              + +K +  K                    ++ +TK +  ++ +  +        SR+
Sbjct: 121 SKGSDDKLEMVK--------------------AINSTKLDNEDQEKERSRI------SRS 152

Query: 181 WQPSLHSISEAAS 194
           WQPSL SISE  S
Sbjct: 181 WQPSLQSISEGGS 152

[Close]

BLAST of Sed0015292.2 vs. TAIR 10
Match: AT1G10530.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60010.1); Has 143 Blast hits to 143 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 113.2 bits (282), Expect = 2.3e-25
Identity = 81/194 (41.75%), Postives = 106/194 (54.64%), Query Frame = 0


Query: 1   MGNCQAIDAATLVIQHPSGKADKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNN 60
           MGNCQA++AA LV+QHP G  D+ Y  V+  E+M M PGHYV+L+I      P       
Sbjct: 1   MGNCQAVNAAVLVLQHPGGIIDRYYSSVSVTEVMAMYPGHYVSLII------PLSEEEEK 60

Query: 61  ETSKVEKKENETSSNSVRLTRIKLLRPADTLVLGQVYRLITSKEVMKGLSAKKQEKVKLS 120
                EK +++    +VR TR++LLRP + LVLG  YRLITS+EVMK L  KK  K K  
Sbjct: 61  NIPATEKGDDKKQRKAVRFTRVQLLRPTENLVLGHAYRLITSQEVMKVLREKKSAKTKKH 120

Query: 121 QLEAAEKSQRRKERTTRMSDSVAAAGRSVTEDSVQATKHEKNNRP-RTSTSTTSAIARSR 180
           Q+          E+TT          +  ++  V   K  K  R  R STS    + +S+
Sbjct: 121 QI----------EKTT--------TAKKFSDKKVPEKKQGKQFRVIRNSTS----LLKSK 166

Query: 181 TWQPSLHSISEAAS 194
           TW+PSL SISEA S
Sbjct: 181 TWRPSLQSISEATS 166

[Close]

BLAST of Sed0015292.2 vs. TAIR 10
Match: AT5G62900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50090.1); Has 157 Blast hits to 157 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 112.1 bits (279), Expect = 5.1e-25
Identity = 80/193 (41.45%), Postives = 105/193 (54.40%), Query Frame = 0


Query: 1   MGNCQAIDAATLVIQHPSGKADKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNN 60
           MGNCQA +AAT VIQ P GK+ + Y  V A E++K +PGH+VALL+S+ +          
Sbjct: 1   MGNCQAAEAATTVIQQPDGKSVRFYCTVNASEVIKSHPGHHVALLLSSAV---------- 60

Query: 61  ETSKVEKKENETSSNSVRLTRIKLLRPADTLVLGQVYRLITSKEVMKGLSAKKQEKVKLS 120
                          S+R+TRIKLLRP+D L+LG VYRLI+S+EVMKG+ AKK  K+K  
Sbjct: 61  -----------PHGGSLRVTRIKLLRPSDNLLLGHVYRLISSEEVMKGIRAKKSGKMKKI 120

Query: 121 QLEAAEKSQRRKERTTRMSDSVAAAGRSVTEDSVQATKHEKNNRPRTSTSTTSAIARSRT 180
             E +   +     T R          S ++   Q   HEK    R   +T  A  + R 
Sbjct: 121 HGEFSVAEEEINPLTLR--------SESASDKDTQRRIHEKQ---RGMMNTGGATNKVRA 161

Query: 181 WQPSLHSISEAAS 194
           WQPSL SISE+ S
Sbjct: 181 WQPSLQSISESTS 161

The following BLAST results are available for this feature:

BLAST of Sed0015292.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022965769.1	3.4e-79	85.85	uncharacterized protein LOC111465553 isoform X2 [Cucurbita maxima]	[more]
XP_022933526.1	3.4e-79	85.85	uncharacterized protein LOC111440926 isoform X2 [Cucurbita moschata]	[more]
KAG6587486.1	4.9e-78	81.86	hypothetical protein SDJN03_16051, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022933525.1	4.9e-78	81.86	uncharacterized protein LOC111440926 isoform X1 [Cucurbita moschata]	[more]
XP_022965761.1	4.9e-78	81.86	uncharacterized protein LOC111465553 isoform X1 [Cucurbita maxima]	[more]

BLAST of Sed0015292.2 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0015292.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HRW5	1.6e-79	85.85	uncharacterized protein LOC111465553 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EZA8	1.6e-79	85.85	uncharacterized protein LOC111440926 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HMJ8	2.4e-78	81.86	uncharacterized protein LOC111465553 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1F544	2.4e-78	81.86	uncharacterized protein LOC111440926 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0LRI4	2.0e-77	86.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005650 PE=4 SV=1	[more]

BLAST of Sed0015292.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60010.1	8.1e-31	44.56	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G50090.1	1.4e-30	47.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G50090.2	1.3e-28	44.04	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G10530.1	2.3e-25	41.75	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G62900.1	5.1e-25	41.45	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..190 e-value: 9.8E-31 score: 107.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..193
None	No IPR available	PANTHER	PTHR33413:SF28	DUF4228 DOMAIN PROTEIN	coord: 1..193
None	No IPR available	PANTHER	PTHR33413	EXPRESSED PROTEIN	coord: 1..193

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0015292	Sed0015292	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0015292.2-five_prime_utr	Sed0015292.2-five_prime_utr-LG08:865719..865898	five_prime_UTR
Sed0015292.2-five_prime_utr	Sed0015292.2-five_prime_utr-LG08:867742..867750	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0015292.2-exon	Sed0015292.2-exon-LG08:865719..865898	exon
Sed0015292.2-exon	Sed0015292.2-exon-LG08:867742..868060	exon
Sed0015292.2-exon	Sed0015292.2-exon-LG08:868190..868344	exon
Sed0015292.2-exon	Sed0015292.2-exon-LG08:868676..869345	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0015292.2-cds	Sed0015292.2-cds-LG08:867751..868060	CDS
Sed0015292.2-cds	Sed0015292.2-cds-LG08:868190..868344	CDS
Sed0015292.2-cds	Sed0015292.2-cds-LG08:868676..868792	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0015292.2-three_prime_utr	Sed0015292.2-three_prime_utr-LG08:868793..869345	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0015292.2	Sed0015292.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane