Sed0014115.1 (mRNA) Chayote v1

Overview


Name	Sed0014115.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Glutaredoxin
Location	LG01: 3966680 .. 3967070 (-)
Sequence length	360
RNA-Seq Expression	Sed0014115.1
Synteny	Sed0014115.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACCAAGCAATCCCATATCGATCATGGCAATCAATTTCAATGGACGCCAAGCCATTCGCTACCCGACCGTGGCGCGATGTCGGTGCATCCGTGTCGGAGAGTGCGGCCATAGTGTTTGCTAGAAGAGGCTGCTGTATGAGCCATGTGGTCAAGCGCCTGCTTCTCGGACTCGGCGCTAACCCTGCCGTTTACGAGGTCGACGAAGATCGAGAATCCGCTGTCGTTGGGGAATTAGAGGCTATCGCGCAATCGGGAACGGGAATGGTGCAGCTGCCCGCGGTGTTTATTGGGGGAGCCTTGTTTGGGGGCTTTGGATAGAGTCATGGCTACTCATATTTCTGGGGATTTGGTTCCTATTTTGAAACAAGCTGGCGCTTTGTGGCTTTGA

mRNA sequence

ATGCACCAAGCAATCCCATATCGATCATGGCAATCAATTTCAATGGACGCCAAGCCATTCGCTACCCGACCGTGGCGCGATGTCGGTGCATCCGTGTCGGAGAGTGCGGCCATAGTGTTTGCTAGAAGAGGCTGCTGTATGAGCCATGTGGTCAAGCGCCTGCTTCTCGGACTCGGCGCTAACCCTGCCGTTTACGAGGTCGACGAAGATCGAGAATCCGCTGTCGTTGGGGAATTAGAGGCTATCGCGCAATCGGGAACGGGAATGCCTTGTTTGGGGGCTTTGGATAGAGTCATGGCTACTCATATTTCTGGGGATTTGGTTCCTATTTTGAAACAAGCTGGCGCTTTGTGGCTTTGA

Coding sequence (CDS)

ATGCACCAAGCAATCCCATATCGATCATGGCAATCAATTTCAATGGACGCCAAGCCATTCGCTACCCGACCGTGGCGCGATGTCGGTGCATCCGTGTCGGAGAGTGCGGCCATAGTGTTTGCTAGAAGAGGCTGCTGTATGAGCCATGTGGTCAAGCGCCTGCTTCTCGGACTCGGCGCTAACCCTGCCGTTTACGAGGTCGACGAAGATCGAGAATCCGCTGTCGTTGGGGAATTAGAGGCTATCGCGCAATCGGGAACGGGAATGCCTTGTTTGGGGGCTTTGGATAGAGTCATGGCTACTCATATTTCTGGGGATTTGGTTCCTATTTTGAAACAAGCTGGCGCTTTGTGGCTTTGA

Protein sequence

MHQAIPYRSWQSISMDAKPFATRPWRDVGASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEDRESAVVGELEAIAQSGTGMPCLGALDRVMATHISGDLVPILKQAGALWL

Homology

[Close]

BLAST of Sed0014115.1 vs. NCBI nr
Match: KAA0067472.1 (glutaredoxin-C9-like [Cucumis melo var. makuwa])

HSP 1 Score: 167.2 bits (422), Expect = 8.8e-38
Identity = 97/148 (65.54%), Postives = 99/148 (66.89%), Query Frame = 0


Query: 1   MHQAIPYRSWQSISMDAKPFATR-PW------------------RDVGASVSESAAIVFA 60
           MHQAIPYRSWQSI       A R PW                  RDV ASVSESAAIVFA
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEDRESAVVGELEAIAQSGT----------GMPC 120
           RRGCCMSHVVKRLLLGLGANPAVYEVDE+ ES VV ELEA A+S            G   
Sbjct: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVVKELEAFAKSSNVNLQLPAVFIGGTL 120

[Close]

BLAST of Sed0014115.1 vs. NCBI nr
Match: XP_038901995.1 (glutaredoxin-C9-like [Benincasa hispida])

HSP 1 Score: 166.8 bits (421), Expect = 1.2e-37
Identity = 96/145 (66.21%), Postives = 99/145 (68.28%), Query Frame = 0


Query: 1   MHQAIPYRSWQSISMDAKPFATR-PW---------------RDVGASVSESAAIVFARRG 60
           MHQAIPYRSWQSI       +TR PW                DV ASVSESAAIVFARRG
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLSTRPPWGGGSASATAEGGGSRSDVIASVSESAAIVFARRG 60

Query: 61  CCMSHVVKRLLLGLGANPAVYEVDEDRESAVVGELEAIAQSGT----------GMPCLGA 120
           CCMSHVVKRLLLGLGANPAVYEVDE+ ES VV ELEA A+S            G    G 
Sbjct: 61  CCMSHVVKRLLLGLGANPAVYEVDEEHESGVVKELEAFAKSSNVKLQLPAVFIGGTLFGG 120

[Close]

BLAST of Sed0014115.1 vs. NCBI nr
Match: XP_008455946.1 (PREDICTED: glutaredoxin-C9-like [Cucumis melo] >TYK09572.1 glutaredoxin-C9-like [Cucumis melo var. makuwa])

HSP 1 Score: 166.0 bits (419), Expect = 2.0e-37
Identity = 96/148 (64.86%), Postives = 99/148 (66.89%), Query Frame = 0


Query: 1   MHQAIPYRSWQSISMDAKPFATR-PW------------------RDVGASVSESAAIVFA 60
           MHQAIPYRSWQSI       A R PW                  RDV ASVSESAAIVFA
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEDRESAVVGELEAIAQSGT----------GMPC 120
           RRGCCMSHVVKRLLLGLGANPAVYEVDE+ ES V+ ELEA A+S            G   
Sbjct: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL 120

[Close]

BLAST of Sed0014115.1 vs. NCBI nr
Match: NP_001274138.1 (glutaredoxin-C9-like [Cucumis sativus] >AGX01498.1 glutaredoxin [Cucumis sativus] >KAE8652271.1 hypothetical protein Csa_022267 [Cucumis sativus])

HSP 1 Score: 164.5 bits (415), Expect = 5.7e-37
Identity = 95/150 (63.33%), Postives = 100/150 (66.67%), Query Frame = 0


Query: 1   MHQAIPYRSWQSISMDAKPFATR-PW--------------------RDVGASVSESAAIV 60
           MHQAIPYRSWQSI       + R PW                    RDV ASVSESAAIV
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLSMRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIV 60

Query: 61  FARRGCCMSHVVKRLLLGLGANPAVYEVDEDRESAVVGELEAIAQSGT----------GM 120
           FARRGCCMSHVVKRLLLGLGANPAVYEVDE++ES V+ ELEA A+S            G 
Sbjct: 61  FARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVFIGG 120

[Close]

BLAST of Sed0014115.1 vs. NCBI nr
Match: XP_022947652.1 (glutaredoxin-C9-like [Cucurbita moschata])

HSP 1 Score: 162.5 bits (410), Expect = 2.2e-36
Identity = 92/131 (70.23%), Postives = 100/131 (76.34%), Query Frame = 0


Query: 1   MHQAIPYRS--WQSISMDAKPFATRPWRDVGASVSESAAIVFARRGCCMSHVVKRLLLGL 60
           M+QAIPYRS   +   + A    +  WRDV ASVSESAAIVFARRGCCMSHVVKRLLLGL
Sbjct: 1   MNQAIPYRSIDTKQSLVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL 60

Query: 61  GANPAVYEVDEDRESAVVGELEAIAQSGTG---MPCL-------GALDRVMATHISGDLV 120
           GANPAVYEV+ED ES VV ELEAIAQ G G   +P +       G L+RVMATHISGDLV
Sbjct: 61  GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV 120

[Close]

BLAST of Sed0014115.1 vs. ExPASy Swiss-Prot
Match: Q9SGP6 (Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.1e-25
Identity = 61/99 (61.62%), Postives = 70/99 (70.71%), Query Frame = 0


Query: 32  VSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEDRESAVVGELEAIAQSGTG--- 91
           V E+A IV  RRGCCM HVV+RLLLGLG NPAV E+DE+RE  V+ ELE I   G G   
Sbjct: 39  VEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEIDEEREDEVLSELENIGVQGGGGTV 98

Query: 92  -MPCL-------GALDRVMATHISGDLVPILKQAGALWL 120
            +P +       G LDRVMATHISG+LVPILK+ GALWL
Sbjct: 99  KLPAVYVGGRLFGGLDRVMATHISGELVPILKEVGALWL 137

[Close]

BLAST of Sed0014115.1 vs. ExPASy Swiss-Prot
Match: P0C291 (Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS9 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 8.3e-23
Identity = 66/132 (50.00%), Postives = 80/132 (60.61%), Query Frame = 0


Query: 1   MHQAIPY---RSWQSISMDAKPFATRP-------WRDVGASVSESAAIVFARRGCCMSHV 60
           M+QAIPY   R+W + S  A   A  P         +V  +V+E   +V  R GCC+SHV
Sbjct: 1   MYQAIPYNANRAWPAASRPATAAAAPPPPPPRGEEEEVRRAVAECPVVVVGRSGCCLSHV 60

Query: 61  VKRLLLGLGANPAVYEVDEDRESAVV---GELEAIAQSGTGMPCLGALDRVMATHISGDL 120
           VKRLL GLG NPAV+EV  + E A V   G   A+     G   LG LDR+MA HISG+L
Sbjct: 61  VKRLLQGLGVNPAVHEVAGEAELAGVVAGGGGVALPAVFVGGRLLGGLDRLMAVHISGEL 120

[Close]

BLAST of Sed0014115.1 vs. ExPASy Swiss-Prot
Match: Q5QLR2 (Monothiol glutaredoxin-S5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS5 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.0e-20
Identity = 56/97 (57.73%), Postives = 66/97 (68.04%), Query Frame = 0


Query: 27  DVGASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEV-DEDRESAVV---GELEAI 86
           +V  +V+ES  +V  RRGCC+ HVVKRLL GLG NPAV+EV  E     VV   GE  A+
Sbjct: 51  EVRRAVAESPVLVVGRRGCCLIHVVKRLLQGLGVNPAVHEVAGEAALKGVVPAGGEAAAL 110

Query: 87  AQSGTGMPCLGALDRVMATHISGDLVPILKQAGALWL 120
                G   LG LDR+MA HISG+LVPILK+AGALWL
Sbjct: 111 PAVFVGGKLLGGLDRLMAVHISGELVPILKKAGALWL 147

[Close]

BLAST of Sed0014115.1 vs. ExPASy Swiss-Prot
Match: Q84TF4 (Monothiol glutaredoxin-S13 OS=Arabidopsis thaliana OX=3702 GN=GRXS13 PE=2 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 1.2e-18
Identity = 52/114 (45.61%), Postives = 66/114 (57.89%), Query Frame = 0


Query: 9   SWQSISMDAKPFATRPWRDVGASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEV- 68
           SW + S   KP +    R     V E+A +VFARRGCC+ HV KRLLL  G NP V E+ 
Sbjct: 38  SWLT-SGSPKPTSISNKRSSNLVVMENAVVVFARRGCCLGHVAKRLLLTHGVNPVVVEIG 97

Query: 69  --DEDRESAVVGELEAIAQSGTGMPCLGALDRVMATHISGDLVPILKQAGALWL 120
             D +    +V + E +     G    G L+ +MA HI+GDLVP L+QAGALWL
Sbjct: 98  EEDNNNYDNIVSDKEKLPMMYIGGKLFGGLENLMAAHINGDLVPTLRQAGALWL 150

[Close]

BLAST of Sed0014115.1 vs. ExPASy Swiss-Prot
Match: Q0JP62 (Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS3 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.2e-18
Identity = 52/118 (44.07%), Postives = 67/118 (56.78%), Query Frame = 0


Query: 26  RDVGASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEDRESAVV--------- 85
           R+V  +V E   +V  RRGCCM+HV +RLLLG GANPAV EV +D + A +         
Sbjct: 19  REVRRAVEEKPVVVVGRRGCCMAHVARRLLLGQGANPAVLEVGDDADPAALVDAALQARR 78

Query: 86  ----GELEAIAQSGTGMP-----------CLGALDRVMATHISGDLVPILKQAGALWL 120
               G+  A    G G              +G LDR+MA H++G+LVP+LKQAGALWL
Sbjct: 79  RKDGGDKAAAGDGGGGAAVAFPAVFIGGRLVGGLDRLMAMHMAGELVPVLKQAGALWL 136

[Close]

BLAST of Sed0014115.1 vs. ExPASy TrEMBL
Match: A0A5A7VGI4 (Glutaredoxin-C9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G001510 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.3e-38
Identity = 97/148 (65.54%), Postives = 99/148 (66.89%), Query Frame = 0


Query: 1   MHQAIPYRSWQSISMDAKPFATR-PW------------------RDVGASVSESAAIVFA 60
           MHQAIPYRSWQSI       A R PW                  RDV ASVSESAAIVFA
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEDRESAVVGELEAIAQSGT----------GMPC 120
           RRGCCMSHVVKRLLLGLGANPAVYEVDE+ ES VV ELEA A+S            G   
Sbjct: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVVKELEAFAKSSNVNLQLPAVFIGGTL 120

[Close]

BLAST of Sed0014115.1 vs. ExPASy TrEMBL
Match: A0A5D3CE70 (Glutaredoxin-C9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757G00610 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 9.5e-38
Identity = 96/148 (64.86%), Postives = 99/148 (66.89%), Query Frame = 0


Query: 1   MHQAIPYRSWQSISMDAKPFATR-PW------------------RDVGASVSESAAIVFA 60
           MHQAIPYRSWQSI       A R PW                  RDV ASVSESAAIVFA
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEDRESAVVGELEAIAQSGT----------GMPC 120
           RRGCCMSHVVKRLLLGLGANPAVYEVDE+ ES V+ ELEA A+S            G   
Sbjct: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL 120

[Close]

BLAST of Sed0014115.1 vs. ExPASy TrEMBL
Match: A0A1S3C224 (glutaredoxin-C9-like OS=Cucumis melo OX=3656 GN=LOC103496008 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 9.5e-38
Identity = 96/148 (64.86%), Postives = 99/148 (66.89%), Query Frame = 0


Query: 1   MHQAIPYRSWQSISMDAKPFATR-PW------------------RDVGASVSESAAIVFA 60
           MHQAIPYRSWQSI       A R PW                  RDV ASVSESAAIVFA
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEDRESAVVGELEAIAQSGT----------GMPC 120
           RRGCCMSHVVKRLLLGLGANPAVYEVDE+ ES V+ ELEA A+S            G   
Sbjct: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL 120

[Close]

BLAST of Sed0014115.1 vs. ExPASy TrEMBL
Match: U3RBI7 (Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX6 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.8e-37
Identity = 95/150 (63.33%), Postives = 100/150 (66.67%), Query Frame = 0


Query: 1   MHQAIPYRSWQSISMDAKPFATR-PW--------------------RDVGASVSESAAIV 60
           MHQAIPYRSWQSI       + R PW                    RDV ASVSESAAIV
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLSMRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIV 60

Query: 61  FARRGCCMSHVVKRLLLGLGANPAVYEVDEDRESAVVGELEAIAQSGT----------GM 120
           FARRGCCMSHVVKRLLLGLGANPAVYEVDE++ES V+ ELEA A+S            G 
Sbjct: 61  FARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVFIGG 120

[Close]

BLAST of Sed0014115.1 vs. ExPASy TrEMBL
Match: A0A6J1G719 (glutaredoxin-C9-like OS=Cucurbita moschata OX=3662 GN=LOC111451451 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.1e-36
Identity = 92/131 (70.23%), Postives = 100/131 (76.34%), Query Frame = 0


Query: 1   MHQAIPYRS--WQSISMDAKPFATRPWRDVGASVSESAAIVFARRGCCMSHVVKRLLLGL 60
           M+QAIPYRS   +   + A    +  WRDV ASVSESAAIVFARRGCCMSHVVKRLLLGL
Sbjct: 1   MNQAIPYRSIDTKQSLVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRLLLGL 60

Query: 61  GANPAVYEVDEDRESAVVGELEAIAQSGTG---MPCL-------GALDRVMATHISGDLV 120
           GANPAVYEV+ED ES VV ELEAIAQ G G   +P +       G L+RVMATHISGDLV
Sbjct: 61  GANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHISGDLV 120

[Close]

BLAST of Sed0014115.1 vs. TAIR 10
Match: AT1G28480.1 (Thioredoxin superfamily protein )

HSP 1 Score: 115.9 bits (289), Expect = 2.2e-26
Identity = 61/99 (61.62%), Postives = 70/99 (70.71%), Query Frame = 0


Query: 32  VSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEDRESAVVGELEAIAQSGTG--- 91
           V E+A IV  RRGCCM HVV+RLLLGLG NPAV E+DE+RE  V+ ELE I   G G   
Sbjct: 39  VEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEIDEEREDEVLSELENIGVQGGGGTV 98

Query: 92  -MPCL-------GALDRVMATHISGDLVPILKQAGALWL 120
            +P +       G LDRVMATHISG+LVPILK+ GALWL
Sbjct: 99  KLPAVYVGGRLFGGLDRVMATHISGELVPILKEVGALWL 137

[Close]

BLAST of Sed0014115.1 vs. TAIR 10
Match: AT1G03850.2 (Glutaredoxin family protein )

HSP 1 Score: 94.0 bits (232), Expect = 8.9e-20
Identity = 52/114 (45.61%), Postives = 66/114 (57.89%), Query Frame = 0


Query: 9   SWQSISMDAKPFATRPWRDVGASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEV- 68
           SW + S   KP +    R     V E+A +VFARRGCC+ HV KRLLL  G NP V E+ 
Sbjct: 38  SWLT-SGSPKPTSISNKRSSNLVVMENAVVVFARRGCCLGHVAKRLLLTHGVNPVVVEIG 97

Query: 69  --DEDRESAVVGELEAIAQSGTGMPCLGALDRVMATHISGDLVPILKQAGALWL 120
             D +    +V + E +     G    G L+ +MA HI+GDLVP L+QAGALWL
Sbjct: 98  EEDNNNYDNIVSDKEKLPMMYIGGKLFGGLENLMAAHINGDLVPTLRQAGALWL 150

[Close]

BLAST of Sed0014115.1 vs. TAIR 10
Match: AT3G02000.1 (Thioredoxin superfamily protein )

HSP 1 Score: 81.6 bits (200), Expect = 4.5e-16
Identity = 51/130 (39.23%), Postives = 69/130 (53.08%), Query Frame = 0


Query: 9   SWQSISMDAKPF------ATRPWRDVGASVSESAAIVFARRGCCMSHVVKRLLLGLGANP 68
           SW S  M +  F      A      + +  SESA ++F+   CCM H VK L  G+G +P
Sbjct: 7   SWGSYKMSSLGFGGLGMVADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLFRGMGVSP 66

Query: 69  AVYEVD-----EDRESAVVGELEAIAQSGTGM--------PCLGALDRVMATHISGDLVP 120
           AV+E+D      D + A++  L     S  G           +GA+DRVMA+HI+G LVP
Sbjct: 67  AVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASHINGSLVP 126

[Close]

BLAST of Sed0014115.1 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 78.2 bits (191), Expect = 5.0e-15
Identity = 39/97 (40.21%), Postives = 58/97 (59.79%), Query Frame = 0


Query: 32  VSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEDRESAVVGELEAIAQSG----- 91
           +SE + ++F++  CCMSH +K L L LG NP +YE+DE      +    A+AQ G     
Sbjct: 8   ISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIE--HALAQLGCSPTV 67

Query: 92  ----TGMPCLGALDRVMATHISGDLVPILKQAGALWL 120
                G   +G  ++VM+ H++  LVP+LK+AGALWL
Sbjct: 68  PVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Sed0014115.1 vs. TAIR 10
Match: AT5G14070.1 (Thioredoxin superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 6.6e-15
Identity = 43/131 (32.82%), Postives = 71/131 (54.20%), Query Frame = 0


Query: 4   AIPYRSWQSISMDAKPFATRPWRDVGASVSESAAIVFARRGCCMSHVVKRLLLGLGANPA 63
           ++ Y +   +  +   F +     + +  +E+A ++F+   CCM H +KRL  G+G +PA
Sbjct: 10  SLSYNNNSKVMNNMNVFPSETLAKIESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPA 69

Query: 64  VYEVD-----EDRESAVVGELEAIAQSGT----------GMPCLGALDRVMATHISGDLV 120
           V+E+D      +   A++  L   +   T          G   +GA++RVMA+HI+G LV
Sbjct: 70  VHELDLLPYGVEIHRALLRLLGCSSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLV 129

The following BLAST results are available for this feature:

BLAST of Sed0014115.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067472.1	8.8e-38	65.54	glutaredoxin-C9-like [Cucumis melo var. makuwa]	[more]
XP_038901995.1	1.2e-37	66.21	glutaredoxin-C9-like [Benincasa hispida]	[more]
XP_008455946.1	2.0e-37	64.86	PREDICTED: glutaredoxin-C9-like [Cucumis melo] >TYK09572.1 glutaredoxin-C9-like ...	[more]
NP_001274138.1	5.7e-37	63.33	glutaredoxin-C9-like [Cucumis sativus] >AGX01498.1 glutaredoxin [Cucumis sativus...	[more]
XP_022947652.1	2.2e-36	70.23	glutaredoxin-C9-like [Cucurbita moschata]	[more]

BLAST of Sed0014115.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SGP6	3.1e-25	61.62	Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1	[more]
P0C291	8.3e-23	50.00	Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS9 PE=3...	[more]
Q5QLR2	3.0e-20	57.73	Monothiol glutaredoxin-S5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS5 PE=2...	[more]
Q84TF4	1.2e-18	45.61	Monothiol glutaredoxin-S13 OS=Arabidopsis thaliana OX=3702 GN=GRXS13 PE=2 SV=2	[more]
Q0JP62	1.2e-18	44.07	Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS3 PE=2...	[more]

BLAST of Sed0014115.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VGI4	4.3e-38	65.54	Glutaredoxin-C9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G...	[more]
A0A5D3CE70	9.5e-38	64.86	Glutaredoxin-C9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757...	[more]
A0A1S3C224	9.5e-38	64.86	glutaredoxin-C9-like OS=Cucumis melo OX=3656 GN=LOC103496008 PE=3 SV=1	[more]
U3RBI7	2.8e-37	63.33	Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX6 PE=2 SV=1	[more]
A0A6J1G719	1.1e-36	70.23	glutaredoxin-C9-like OS=Cucurbita moschata OX=3662 GN=LOC111451451 PE=3 SV=1	[more]

BLAST of Sed0014115.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28480.1	2.2e-26	61.62	Thioredoxin superfamily protein	[more]
AT1G03850.2	8.9e-20	45.61	Glutaredoxin family protein	[more]
AT3G02000.1	4.5e-16	39.23	Thioredoxin superfamily protein	[more]
AT4G15700.1	5.0e-15	40.21	Thioredoxin superfamily protein	[more]
AT5G14070.1	6.6e-15	32.82	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 26..118 e-value: 5.7E-14 score: 53.7
None	No IPR available	PANTHER	PTHR10168:SF219	GLUTAREDOXIN-C9	coord: 26..119
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 25..118 score: 11.751143
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 38..74 e-value: 2.9E-5 score: 24.2
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 31..119 e-value: 4.6E-28 score: 95.1
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 26..119
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 29..118

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0014115	Sed0014115	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0014115.1-exon	Sed0014115.1-exon-LG01:3966680..3966772	exon
Sed0014115.1-exon	Sed0014115.1-exon-LG01:3966804..3967070	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0014115.1-cds	Sed0014115.1-cds-LG01:3966680..3966772	CDS
Sed0014115.1-cds	Sed0014115.1-cds-LG01:3966804..3967070	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0014115.1	Sed0014115.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity