
Sed0013303.2 (mRNA) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGGGGATTTGTTGAAAGAATCAATTGACTGCTCATTTAGTGAAAAAATAAAGTTGTTGTCTGCAAATGCAAAAGAAAGATCTATGGTTATTTCAGATGCTCATAGGTCCAAGGATTTGGACATGCCAGAAATGGGGCAATCTCATTTGGCAGTAAATTTTTCGAAGGAAAAGAATGAGCAGAAGCACAATACTTTACAATGTGGAGAAGTTTCTGGAGCATCTGTCTTGACCACATTGAATGTTAAAGCTCTTAAAGAAGATGTGACGTCTATTTCCCCAAATGGAGACTTTTGTTCTGTAGATGAAAATGACAATTCTTTAATTCTTGAGGATCCAGATAGGAAAAGGATTAATATGGTAAAAAGAGATGATGAAAATACAGAGACTGTAGATCATTCAACTCCTTCAAGCCATGTTGAAACCAAAAAAATGAGAAAAAGAAAACGCCAACGTGAAAAGCGAAGGTCCTTAAAGTCTGCTAAAAAAAGTTTGGAATCCCCTACAGAGGACAGAAAGAAACTTTCTCTGTTGAGCCATCCTCATGAAGCAGAAACAACTGGCCACCTCAAACATTTTGCAAAAGATGTTATGAATGAGATTTTGTTGGAAGAATCAATTGACTGCTCAATTAGTGAAAAAACAGAGTTGTCTTCAAATACAAAGGAAAGCTCTATGGTTATTGCAGATGCCCACAGTCCCAAGGATTTTGAAAATACTTTGATGACTAAAAAGGATGATGACTGCTTAGAGACTAAAGAATGTTTGGCTGAATCAAACAGTGACTATACCCCTGGCCAAACAAAAAGAAAGAGAAAAAAAGGTCGAAGAAATAGAAAGCTTGTAGATACTCTCGAAGGAATTTTGAATTTTGATGTGGAGGATAATAAAAAAAATGCTTCGTCCAACTGTTCAAATGAAGTGGATGCAACTAGTTTGCATGAACATTCAACCACCAATGATCTAGTAAAAAATGTTTTGGTGGAATCCATAAAGCAAAAGGTTCCTCATTCGTCGGCTTGTGATGCAACAAATGATAACATTGGTGCTGTTCTAGAGAAAAACAGTTCATCACGGATATCAAGTTCTTCAAATGAAAGAGACGCAACTGGTTTTTTAAAGAAAAAGCTTCTCATACTTGATGTAAATGGACTGCTCGTAGATTTTGTTCCATATCATCCAGATGGATACACTCCAGACATTGTAATATCACGTAAAGCAGGTGAAAGAAACTTCTGCTAGATGCAACCTTAGCATTAATGAACATACTTGGTTATATTCTTTCTTATTTTTCAGTGTTTAAAAGGCCCTTCTGTGACGACTTTCTACAGTTTTGTTTCGAGAGATTTGAAGTGGGTATATGGTCATCGAGAACACGGTAGTTCAATCTAAAGCTGGTCAATTGCTTGTTATCAACCAATAACCGTGTTAAATATGATTTCTAGTTGTCTTCTTTCTAGTGCATGTCTTATGTTGGCATTAGCTTCAAAATTTTAGCGTTGACACTAGTCATGTGCCCTTATCTCATGTTATTTTCTGCAGGAAAAACCTGAACATGTTAGTTGAGTCTCTTATGAGAGATTCCAGACACAAGCTACTTTTTTGCTGGGTAAGCCAAGTCATATCTCTATGAAAATAAGGAGTATGCATCACCTTTCTAATAACTAGTCTACTAAGGAATTGTGTGTTGCATTTGACATGTGACTGTTGCAATATTCTTCTTAATATTTCTTTTTCAAGGCTTGTTTGCCTACATTGTTGAATTCTTGATGGTAGAATAAGTATTGTTTTACTGGAACGTGGCATACATACAGATAAAGTTAAAACTTGTTTATAATATAAGAATTCACTTTTTGTTTATGGAGTTTGGTGAATAAAAAATAGGCAACTTACATTCAAGTGTTTTACATAACCTACTGGCTGTGCTTTTTTTTTTTTTTTTGCAAGTCAATTTTCTAAATTTCCCCCACCAACAAGTTTCATGCTCTTTTATGACAATGCTAAGATGGTCGATGCAGGATCAATCACACTGTACGACTACAAGTTTCACCACTGTTGAGAACAACGAGAAGCCCCTGGTTTTGAAGGAACTGAAAAAAATATGGGACACTTTGGAACCGAATCTTCCATGGAAAAAGGGAGAGTACAATGCATCAAATACTTTATTGTTGGACGATTCCCCATACAAGGCTTTGTGCAATCCAGTTAGTTGAAAAACCTCTACCATGTTTTCATTTGAGGATAAGAACTCTTTCAATTGCTTTGAAGCTGATCTAATAGTTTCTTTGTCTTGATTTATCGTCATTTACAGGCTAATACTGCAGTATTTCCCACTACATATCAGTTCACGGACAGTGATGATTCATCATTAGGTAAGAACTGTGACATATGCACAAAGTGCTGAAGTTTTAGGTGAATTGTTGTATACAGTTGAAGAATAGTGTAAACCTACAATCCTTTTTTTTTTTTTAATGAAATTGAGTTGATAAAGAATAACCCTTGGTCGCATTTTTCGTTTGATGATATTTGATTTGTTCTTATCCTAAAACACCATAGAGTAGCCTAGTGGTCAATAGCACATTAAGAAACCAATAGGTTAAGGGTTCAATCCATGGTAGCCACCTACCTAAGAATTAATTTCCTACGGGTTTCCTAGACATCCAAATTTTGTAGAGTTATGGCAGTATGTCATGTGAAAATAGTTGAAGTGCGTACAAGCTGACCCAGACACTCACGAATATCAAAAAAAATTATGATAGTTTTTGAAATATAGATGAATATCAATTTTCTTTATTATTGAAATGCTTTATATTGACCCCTAAGTGTTTCTTAGTCATCCTGGGTTATACTATACAACAACCACAATTCTTTTTTCATGATTGTTGTCAATCTTTTGCCAATATCTTTTTTAACATTTAATCTTGTGCAGGACCTGGTGGTGATCTCCGCACTTATTTGGAGGGTGTATCTACGGCAGAAAATGTTCAGAAATATGTCGAACAGAATCCATTTGGTCAAAGGTCCATTTCTGAATCTGATCAATCTTGGAGATTTTACCTAAAAGTTATCAATAGTGTGAAGTAAAGATGATGACCATGACCATATATTTAAGACTGGTTCACATGGTTCTTTGGATAAAGTAGCTTCCCATGCAAGACTAGAAGCCTATTTTCCCTCTACATTTTTCAGTAGGTTATGTTTCTTTGTGGAAAATTTTGTTTTACGGCCAGGACTACTGGGGTATATCTAATTCCATTCGCTCTCCTAGCTCTCGTCTCTCCGTGTCAGCGTCGGCTCAGCAGAGTAACTTTTTGGCAAGTATAACTTCTTCGTTTTTTCCTTGCGTTTATCGAAGATGATTAAGCAAACCTAATCTAGCTTTTTGGCGAGTTCAGCTTCATCATTCTTTTTTTTGTTTCTGAGGGTTAACCAATCTAGCTTTACTACATAGAGTTCTGAGATCATAATACTTAGCTAGAAATTCAGTTTTCTCTAGCAATTACGTTGACGATGCGTCTGTAATTTGTAGAAACGTTTGCACATTGTAGTTGCATTTTATTTCTGACAAGGGATGGAAAACTCGAACCGATGGTATCGATGCGAGACATTTTTGCAATGTACTTTGATTCTTATGAAGATTAATTCTAGGGGATTTTGCATATA ATGAATGGGGATTTGTTGAAAGAATCAATTGACTGCTCATTTAGTGAAAAAATAAAGTTGTTGTCTGCAAATGCAAAAGAAAGATCTATGGTTATTTCAGATGCTCATAGGTCCAAGGATTTGGACATGCCAGAAATGGGGCAATCTCATTTGGCAGTAAATTTTTCGAAGGAAAAGAATGAGCAGAAGCACAATACTTTACAATGTGGAGAAGTTTCTGGAGCATCTGTCTTGACCACATTGAATGTTAAAGCTCTTAAAGAAGATGTGACGTCTATTTCCCCAAATGGAGACTTTTGTTCTGTAGATGAAAATGACAATTCTTTAATTCTTGAGGATCCAGATAGGAAAAGGATTAATATGGTAAAAAGAGATGATGAAAATACAGAGACTGTAGATCATTCAACTCCTTCAAGCCATGTTGAAACCAAAAAAATGAGAAAAAGAAAACGCCAACGTGAAAAGCGAAGGTCCTTAAAGTCTGCTAAAAAAAGTTTGGAATCCCCTACAGAGGACAGAAAGAAACTTTCTCTGTTGAGCCATCCTCATGAAGCAGAAACAACTGGCCACCTCAAACATTTTGCAAAAGATGTTATGAATGAGATTTTGTTGGAAGAATCAATTGACTGCTCAATTAGTGAAAAAACAGAGTTGTCTTCAAATACAAAGGAAAGCTCTATGGTTATTGCAGATGCCCACAGTCCCAAGGATTTTGAAAATACTTTGATGACTAAAAAGGATGATGACTGCTTAGAGACTAAAGAATGTTTGGCTGAATCAAACAGTGACTATACCCCTGGCCAAACAAAAAGAAAGAGAAAAAAAGGTCGAAGAAATAGAAAGCTTGTAGATACTCTCGAAGGAATTTTGAATTTTGATGTGGAGGATAATAAAAAAAATGCTTCGTCCAACTGTTCAAATGAAGTGGATGCAACTAGTTTGCATGAACATTCAACCACCAATGATCTAGTAAAAAATGTTTTGGTGGAATCCATAAAGCAAAAGGTTCCTCATTCGTCGGCTTGTGATGCAACAAATGATAACATTGGTGCTGTTCTAGAGAAAAACAGTTCATCACGGATATCAAGTTCTTCAAATGAAAGAGACGCAACTGGTTTTTTAAAGAAAAAGCTTCTCATACTTGATGTAAATGGACTGCTCGTAGATTTTGTTCCATATCATCCAGATGGATACACTCCAGACATTGTAATATCACGTAAAGCAGTGTTTAAAAGGCCCTTCTGTGACGACTTTCTACAGTTTTGTTTCGAGAGATTTGAAGTGGGTATATGGTCATCGAGAACACGGAAAAACCTGAACATGTTAGTTGAGTCTCTTATGAGAGATTCCAGACACAAGCTACTTTTTTGCTGGGATCAATCACACTGTACGACTACAAGTTTCACCACTGTTGAGAACAACGAGAAGCCCCTGGTTTTGAAGGAACTGAAAAAAATATGGGACACTTTGGAACCGAATCTTCCATGGAAAAAGGGAGAGTACAATGCATCAAATACTTTATTGTTGGACGATTCCCCATACAAGGCTTTGTGCAATCCAGTTAGTTGAAAAACCTCTACCATGTTTTCATTTGAGGATAAGAACTCTTTCAATTGCTTTGAAGCTGATCTAATAGTTTCTTTGTCTTGATTTATCGTCATTTACAGGCTAATACTGCAGTATTTCCCACTACATATCAGTTCACGGACAGTGATGATTCATCATTAGGACCTGGTGGTGATCTCCGCACTTATTTGGAGGGTGTATCTACGGCAGAAAATGTTCAGAAATATGTCGAACAGAATCCATTTGGTCAAAGGTCCATTTCTGAATCTGATCAATCTTGGAGATTTTACCTAAAAGTTATCAATAGTGTGAAGTAAAGATGATGACCATGACCATATATTTAAGACTGGTTCACATGGTTCTTTGGATAAAGTAGCTTCCCATGCAAGACTAGAAGCCTATTTTCCCTCTACATTTTTCAGTAGGTTATGTTTCTTTGTGGAAAATTTTGTTTTACGGCCAGGACTACTGGGGTATATCTAATTCCATTCGCTCTCCTAGCTCTCGTCTCTCCGTGTCAGCGTCGGCTCAGCAGAGTAACTTTTTGGCAAGTATAACTTCTTCGTTTTTTCCTTGCGTTTATCGAAGATGATTAAGCAAACCTAATCTAGCTTTTTGGCGAGTTCAGCTTCATCATTCTTTTTTTTGTTTCTGAGGGTTAACCAATCTAGCTTTACTACATAGAGTTCTGAGATCATAATACTTAGCTAGAAATTCAGTTTTCTCTAGCAATTACGTTGACGATGCGTCTGTAATTTGTAGAAACGTTTGCACATTGTAGTTGCATTTTATTTCTGACAAGGGATGGAAAACTCGAACCGATGGTATCGATGCGAGACATTTTTGCAATGTACTTTGATTCTTATGAAGATTAATTCTAGGGGATTTTGCATATA ATGAATGGGGATTTGTTGAAAGAATCAATTGACTGCTCATTTAGTGAAAAAATAAAGTTGTTGTCTGCAAATGCAAAAGAAAGATCTATGGTTATTTCAGATGCTCATAGGTCCAAGGATTTGGACATGCCAGAAATGGGGCAATCTCATTTGGCAGTAAATTTTTCGAAGGAAAAGAATGAGCAGAAGCACAATACTTTACAATGTGGAGAAGTTTCTGGAGCATCTGTCTTGACCACATTGAATGTTAAAGCTCTTAAAGAAGATGTGACGTCTATTTCCCCAAATGGAGACTTTTGTTCTGTAGATGAAAATGACAATTCTTTAATTCTTGAGGATCCAGATAGGAAAAGGATTAATATGGTAAAAAGAGATGATGAAAATACAGAGACTGTAGATCATTCAACTCCTTCAAGCCATGTTGAAACCAAAAAAATGAGAAAAAGAAAACGCCAACGTGAAAAGCGAAGGTCCTTAAAGTCTGCTAAAAAAAGTTTGGAATCCCCTACAGAGGACAGAAAGAAACTTTCTCTGTTGAGCCATCCTCATGAAGCAGAAACAACTGGCCACCTCAAACATTTTGCAAAAGATGTTATGAATGAGATTTTGTTGGAAGAATCAATTGACTGCTCAATTAGTGAAAAAACAGAGTTGTCTTCAAATACAAAGGAAAGCTCTATGGTTATTGCAGATGCCCACAGTCCCAAGGATTTTGAAAATACTTTGATGACTAAAAAGGATGATGACTGCTTAGAGACTAAAGAATGTTTGGCTGAATCAAACAGTGACTATACCCCTGGCCAAACAAAAAGAAAGAGAAAAAAAGGTCGAAGAAATAGAAAGCTTGTAGATACTCTCGAAGGAATTTTGAATTTTGATGTGGAGGATAATAAAAAAAATGCTTCGTCCAACTGTTCAAATGAAGTGGATGCAACTAGTTTGCATGAACATTCAACCACCAATGATCTAGTAAAAAATGTTTTGGTGGAATCCATAAAGCAAAAGGTTCCTCATTCGTCGGCTTGTGATGCAACAAATGATAACATTGGTGCTGTTCTAGAGAAAAACAGTTCATCACGGATATCAAGTTCTTCAAATGAAAGAGACGCAACTGGTTTTTTAAAGAAAAAGCTTCTCATACTTGATGTAAATGGACTGCTCGTAGATTTTGTTCCATATCATCCAGATGGATACACTCCAGACATTGTAATATCACGTAAAGCAGTGTTTAAAAGGCCCTTCTGTGACGACTTTCTACAGTTTTGTTTCGAGAGATTTGAAGTGGGTATATGGTCATCGAGAACACGGAAAAACCTGAACATGTTAGTTGAGTCTCTTATGAGAGATTCCAGACACAAGCTACTTTTTTGCTGGGATCAATCACACTGTACGACTACAAGTTTCACCACTGTTGAGAACAACGAGAAGCCCCTGGTTTTGAAGGAACTGAAAAAAATATGGGACACTTTGGAACCGAATCTTCCATGGAAAAAGGGAGAGTACAATGCATCAAATACTTTATTGTTGGACGATTCCCCATACAAGGCTTTGTGCAATCCAGTTAGTTGA MNGDLLKESIDCSFSEKIKLLSANAKERSMVISDAHRSKDLDMPEMGQSHLAVNFSKEKNEQKHNTLQCGEVSGASVLTTLNVKALKEDVTSISPNGDFCSVDENDNSLILEDPDRKRINMVKRDDENTETVDHSTPSSHVETKKMRKRKRQREKRRSLKSAKKSLESPTEDRKKLSLLSHPHEAETTGHLKHFAKDVMNEILLEESIDCSISEKTELSSNTKESSMVIADAHSPKDFENTLMTKKDDDCLETKECLAESNSDYTPGQTKRKRKKGRRNRKLVDTLEGILNFDVEDNKKNASSNCSNEVDATSLHEHSTTNDLVKNVLVESIKQKVPHSSACDATNDNIGAVLEKNSSSRISSSSNERDATGFLKKKLLILDVNGLLVDFVPYHPDGYTPDIVISRKAVFKRPFCDDFLQFCFERFEVGIWSSRTRKNLNMLVESLMRDSRHKLLFCWDQSHCTTTSFTTVENNEKPLVLKELKKIWDTLEPNLPWKKGEYNASNTLLLDDSPYKALCNPVS Homology
BLAST of Sed0013303.2 vs. NCBI nr
Match: XP_023001699.1 (uncharacterized protein LOC111495745 isoform X2 [Cucurbita maxima]) HSP 1 Score: 671.4 bits (1731), Expect = 6.3e-189 Identity = 370/521 (71.02%), Postives = 412/521 (79.08%), Query Frame = 0
BLAST of Sed0013303.2 vs. NCBI nr
Match: XP_023001681.1 (uncharacterized protein LOC111495745 isoform X1 [Cucurbita maxima] >XP_023001690.1 uncharacterized protein LOC111495745 isoform X1 [Cucurbita maxima]) HSP 1 Score: 671.4 bits (1731), Expect = 6.3e-189 Identity = 370/521 (71.02%), Postives = 412/521 (79.08%), Query Frame = 0
BLAST of Sed0013303.2 vs. NCBI nr
Match: KAG7021557.1 (hypothetical protein SDJN02_15282, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 662.9 bits (1709), Expect = 2.3e-186 Identity = 361/500 (72.20%), Postives = 400/500 (80.00%), Query Frame = 0
BLAST of Sed0013303.2 vs. NCBI nr
Match: XP_022933718.1 (uncharacterized protein LOC111441052 [Cucurbita moschata] >XP_022933719.1 uncharacterized protein LOC111441052 [Cucurbita moschata]) HSP 1 Score: 661.8 bits (1706), Expect = 5.0e-186 Identity = 361/500 (72.20%), Postives = 399/500 (79.80%), Query Frame = 0
BLAST of Sed0013303.2 vs. NCBI nr
Match: XP_023531279.1 (uncharacterized protein LOC111793569 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023531280.1 uncharacterized protein LOC111793569 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 653.3 bits (1684), Expect = 1.8e-183 Identity = 358/500 (71.60%), Postives = 396/500 (79.20%), Query Frame = 0
BLAST of Sed0013303.2 vs. ExPASy TrEMBL
Match: A0A6J1KLW3 (uncharacterized protein LOC111495745 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495745 PE=4 SV=1) HSP 1 Score: 671.4 bits (1731), Expect = 3.1e-189 Identity = 370/521 (71.02%), Postives = 412/521 (79.08%), Query Frame = 0
BLAST of Sed0013303.2 vs. ExPASy TrEMBL
Match: A0A6J1KNF4 (uncharacterized protein LOC111495745 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495745 PE=4 SV=1) HSP 1 Score: 671.4 bits (1731), Expect = 3.1e-189 Identity = 370/521 (71.02%), Postives = 412/521 (79.08%), Query Frame = 0
BLAST of Sed0013303.2 vs. ExPASy TrEMBL
Match: A0A6J1F5L8 (uncharacterized protein LOC111441052 OS=Cucurbita moschata OX=3662 GN=LOC111441052 PE=4 SV=1) HSP 1 Score: 661.8 bits (1706), Expect = 2.4e-186 Identity = 361/500 (72.20%), Postives = 399/500 (79.80%), Query Frame = 0
BLAST of Sed0013303.2 vs. ExPASy TrEMBL
Match: A0A6J1C3M3 (uncharacterized protein LOC111007122 OS=Momordica charantia OX=3673 GN=LOC111007122 PE=4 SV=1) HSP 1 Score: 643.7 bits (1659), Expect = 6.8e-181 Identity = 341/502 (67.93%), Postives = 394/502 (78.49%), Query Frame = 0
BLAST of Sed0013303.2 vs. ExPASy TrEMBL
Match: A0A6J1JAA3 (uncharacterized protein LOC111484966 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484966 PE=4 SV=1) HSP 1 Score: 606.7 bits (1563), Expect = 9.3e-170 Identity = 331/522 (63.41%), Postives = 381/522 (72.99%), Query Frame = 0
BLAST of Sed0013303.2 vs. TAIR 10
Match: AT3G29760.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 161.4 bits (407), Expect = 2.0e-39 Identity = 139/459 (30.28%), Postives = 210/459 (45.75%), Query Frame = 0
BLAST of Sed0013303.2 vs. TAIR 10
Match: AT4G26190.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 131.0 bits (328), Expect = 2.9e-30 Identity = 132/492 (26.83%), Postives = 221/492 (44.92%), Query Frame = 0
BLAST of Sed0013303.2 vs. TAIR 10
Match: AT2G36540.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 104.8 bits (260), Expect = 2.2e-22 Identity = 62/151 (41.06%), Postives = 83/151 (54.97%), Query Frame = 0
BLAST of Sed0013303.2 vs. TAIR 10
Match: AT2G36550.1 (CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G36540.1); Has 91 Blast hits to 91 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 55.8 bits (133), Expect = 1.2e-07 Identity = 26/62 (41.94%), Postives = 40/62 (64.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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