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Sed0012151.1 (mRNA) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTTGATTTTCTTCAGATTTCAAAACCCTAAACCCTAAAAAGATGATCGGCGCTTACCGGAGAAGCTCTAGGGTTTCTGGGTTGTTGCATTTCCGCCATTTTTGTCAGCTGAAAGGTTCTTCTTCTCCGATCGTGAGGAAGCAACCTCAGCCCCTTCGGCCGTACTTTCGTTCGCCGGAATCTTTCAGGAAGACGAAGGAGGTTGGTGCATTTCCATCGCTGCGGTTCTCGTCTGTTTCGTCGGTTTTCTCGACTGTGAAGGTCGAGTTTGTTGAGTGGTATTTGGGTATGGTGAAATGCCGCCCCGTTCTTACGAAGAGTGTTACGTCTGCGTTTATTTACACGGCTGCTGATTTGTCGTCTCAGGTGAGAATTGTGTTTTGATTATTTGTGATCTTCGAGTTTTGGGTTCTTTTATTGGGGGTTTTGTTCATTCGTTGATTTGTTGATTTGTTTGTCTTGTCGCCAAGCGGCAGCCCAATGGTTGAGGCAATAAGCATTTCAAGACATGCTTTCTTAAGAGATTCCTGTTTCGACGCCTCTGGAAAGCTCTTAAACTAGAATACCCTTCGAAGTATCTCGGTGCCACAACTTAGGGACGGGCCTGTGTCTCCCTGGGTATAGGGGAGGAAAGCTCAAATTTCCCGGGTTTTCAAAAAAAAAAAACAAAAAAGAAAGATTTGTTTGTCTCTGATGGCTAGTTTGGGGGGCAAGTTTATTTTGAAGTGTCGTTTTATTTGTTCTTTTATCGTTCTTCATAACAAGATTTTATTCTGGTTTATGACTTTTGAACATCTGTATTCATTTGAGATTGCCGGTTTGAATGATTTGGGAATCGGATTTTAGTGCTAATGCTGCTCTGTTTTTTAGGTTCTCATTGTGGGGTTCTGTTGGTGCTTATCTCTAATGGTTCTCATTTGGCTAGATTTGGGGCAAGTTTTTGTTAGAACCTCTTGGTACTCCTATATGTTCTAGAAGTGGTAATTTGGGTATTGATGGAAGGGCCTAGTTGTTAGGAGGTGAGGTGGTTAGTCTTCTCATAAGGAAGAACAATGGGAGTATAAATGGATTAGTGGTATGAAGGGGTATGTAAAAGGTTGTGAAATCTAAAGGGAGTGATTATCCGCACTCTCAAATGCACCGAGTAGCTTGTTATTATTTATTTCTATTTCGTCTTGTTATTGTTTATTTCTGTAAAACGAAGATAACTTACCAACAAAGTTTAGTAGTATCATGTATAACCTTGTAACCAAGAGAGTATAGTCCCCAAGGGGTGGCACAGTGGTTGAAAACCTGGGCTTGGAGGATATGCTACCTTCAAGGTTCTAGGTTTGGGACTCAGCTGTGACATTAGAACTTCGATGTCTCCCGAAGCCTGGCCTAGGGACGGGCGTGGTTACCCTTGTTTCAAAAAAAAAAAGTAACCAAGAGGTTATAGGTTTTCTTAATTATTGTTGAATTAAAAAAAAAGAAAGTAAATGCAAGTTATTTACCATTGTATTGTGTTCGTTTGGGTACTTCAGCAACGGTAGGTAACAGTACTTTTCTTTGACGAGTCCATTTATCTGTTTTTGGACTTCTCATCATAGCAATTTTTGTTCTTGTCTGCTACTTGACATTAGAGATAGTCATTTGAAATGATGCTCTCATTTGGATCAATTTTCTTCAGACCATTGCTCTGCCATCTTCAGAGCCATATGATCTAATTCGAACACTACGCATGGCTGGATATGGCTTGGTGATTCTAGGGCCATCTCTCCATTACTGGTTCAACCTCATGTCAAAACTCTTTCCCAAGAAAGACCTCTTCTCCACCTTGAAGAAAATGGCCATGGGCCAGAGCCTCTTTGGCCCTTCCATGACAGTCATTTTCTTTTCCATGAATGCGTATGTCCAAGGTACGCCATTTTTTACAACCTGCTTTCAGTTCTAAAACTTAAGATGACTGAGAATGGTGTCATCGAAAACAGGTGAAAATAGTTCTGAAATTATTGCCCGATTGAAACGAGACTTGCTTCCGACTATGCTCAATGGCCTAATGTACTGGCCAGTTTGCGACTTCATTACATTCAGATTCGTCCCTGTTCATCTTCAAGTATGTCATGTTCTTTAATCTCTGCCCATCTGATTCTCTCTACCCTTCTCTTCTGGTGTTGGTTTTGAATGTTGTTTTGGTGTTTGTTTGGTTTTTCAGGCCTTGGTTAGCAATTCGTTTTCGTATATGTGGACTGTTTACATGACATACATGGCGAGCCGTGAGAAAGCTGCATCATGATCTGATCCCAATGGCTGAATATTTTATGTTCAGAGATGAGATTCTTTTGCAGATTGAAGCACAAAGGACTGTTAAAGTATAAATTGGCAGATTATTAGCATATGGAAAAGAGCAAAGATTCTTTGATCAGTTAATATAATTGTATAGATTTTCATGAGAAAAGAAATGTAGAAGTGAAGAACCTGTCTGGGATTTTGTTCTGCCA GTTTTGATTTTCTTCAGATTTCAAAACCCTAAACCCTAAAAAGATGATCGGCGCTTACCGGAGAAGCTCTAGGGTTTCTGGGTTGTTGCATTTCCGCCATTTTTGTCAGCTGAAAGGTTCTTCTTCTCCGATCGTGAGGAAGCAACCTCAGCCCCTTCGGCCGTACTTTCGTTCGCCGGAATCTTTCAGGAAGACGAAGGAGGTTGGTGCATTTCCATCGCTGCGGTTCTCGTCTGTTTCGTCGGTTTTCTCGACTGTGAAGGTCGAGTTTGTTGAGTGGTATTTGGGTATGGTGAAATGCCGCCCCGTTCTTACGAAGAGTGTTACGTCTGCGTTTATTTACACGGCTGCTGATTTGTCGTCTCAGACCATTGCTCTGCCATCTTCAGAGCCATATGATCTAATTCGAACACTACGCATGGCTGGATATGGCTTGGTGATTCTAGGGCCATCTCTCCATTACTGGTTCAACCTCATGTCAAAACTCTTTCCCAAGAAAGACCTCTTCTCCACCTTGAAGAAAATGGCCATGGGCCAGAGCCTCTTTGGCCCTTCCATGACAGTCATTTTCTTTTCCATGAATGCGTATGTCCAAGGTGAAAATAGTTCTGAAATTATTGCCCGATTGAAACGAGACTTGCTTCCGACTATGCTCAATGGCCTAATGTACTGGCCAGTTTGCGACTTCATTACATTCAGATTCGTCCCTGTTCATCTTCAAGCCTTGGTTAGCAATTCGTTTTCGTATATGTGGACTGTTTACATGACATACATGGCGAGCCGTGAGAAAGCTGCATCATGATCTGATCCCAATGGCTGAATATTTTATGTTCAGAGATGAGATTCTTTTGCAGATTGAAGCACAAAGGACTGTTAAAGTATAAATTGGCAGATTATTAGCATATGGAAAAGAGCAAAGATTCTTTGATCAGTTAATATAATTGTATAGATTTTCATGAGAAAAGAAATGTAGAAGTGAAGAACCTGTCTGGGATTTTGTTCTGCCA ATGATCGGCGCTTACCGGAGAAGCTCTAGGGTTTCTGGGTTGTTGCATTTCCGCCATTTTTGTCAGCTGAAAGGTTCTTCTTCTCCGATCGTGAGGAAGCAACCTCAGCCCCTTCGGCCGTACTTTCGTTCGCCGGAATCTTTCAGGAAGACGAAGGAGGTTGGTGCATTTCCATCGCTGCGGTTCTCGTCTGTTTCGTCGGTTTTCTCGACTGTGAAGGTCGAGTTTGTTGAGTGGTATTTGGGTATGGTGAAATGCCGCCCCGTTCTTACGAAGAGTGTTACGTCTGCGTTTATTTACACGGCTGCTGATTTGTCGTCTCAGACCATTGCTCTGCCATCTTCAGAGCCATATGATCTAATTCGAACACTACGCATGGCTGGATATGGCTTGGTGATTCTAGGGCCATCTCTCCATTACTGGTTCAACCTCATGTCAAAACTCTTTCCCAAGAAAGACCTCTTCTCCACCTTGAAGAAAATGGCCATGGGCCAGAGCCTCTTTGGCCCTTCCATGACAGTCATTTTCTTTTCCATGAATGCGTATGTCCAAGGTGAAAATAGTTCTGAAATTATTGCCCGATTGAAACGAGACTTGCTTCCGACTATGCTCAATGGCCTAATGTACTGGCCAGTTTGCGACTTCATTACATTCAGATTCGTCCCTGTTCATCTTCAAGCCTTGGTTAGCAATTCGTTTTCGTATATGTGGACTGTTTACATGACATACATGGCGAGCCGTGAGAAAGCTGCATCATGA MIGAYRRSSRVSGLLHFRHFCQLKGSSSPIVRKQPQPLRPYFRSPESFRKTKEVGAFPSLRFSSVSSVFSTVKVEFVEWYLGMVKCRPVLTKSVTSAFIYTAADLSSQTIALPSSEPYDLIRTLRMAGYGLVILGPSLHYWFNLMSKLFPKKDLFSTLKKMAMGQSLFGPSMTVIFFSMNAYVQGENSSEIIARLKRDLLPTMLNGLMYWPVCDFITFRFVPVHLQALVSNSFSYMWTVYMTYMASREKAAS Homology
BLAST of Sed0012151.1 vs. NCBI nr
Match: XP_038903514.1 (PXMP2/4 family protein 4-like [Benincasa hispida]) HSP 1 Score: 429.5 bits (1103), Expect = 2.0e-116 Identity = 214/256 (83.59%), Postives = 233/256 (91.02%), Query Frame = 0
BLAST of Sed0012151.1 vs. NCBI nr
Match: XP_022942949.1 (PXMP2/4 family protein 4-like [Cucurbita moschata]) HSP 1 Score: 425.6 bits (1093), Expect = 2.9e-115 Identity = 213/256 (83.20%), Postives = 231/256 (90.23%), Query Frame = 0
BLAST of Sed0012151.1 vs. NCBI nr
Match: KAG6600293.1 (PXMP2/4 family protein 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030953.1 PXMP2/4 family protein 4 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 424.5 bits (1090), Expect = 6.5e-115 Identity = 212/256 (82.81%), Postives = 231/256 (90.23%), Query Frame = 0
BLAST of Sed0012151.1 vs. NCBI nr
Match: XP_023525272.1 (PXMP2/4 family protein 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 424.1 bits (1089), Expect = 8.5e-115 Identity = 213/256 (83.20%), Postives = 230/256 (89.84%), Query Frame = 0
BLAST of Sed0012151.1 vs. NCBI nr
Match: XP_022992610.1 (PXMP2/4 family protein 4-like [Cucurbita maxima]) HSP 1 Score: 416.8 bits (1070), Expect = 1.4e-112 Identity = 208/255 (81.57%), Postives = 227/255 (89.02%), Query Frame = 0
BLAST of Sed0012151.1 vs. ExPASy Swiss-Prot
Match: Q54FR4 (PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE=3 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 4.4e-21 Identity = 54/169 (31.95%), Postives = 87/169 (51.48%), Query Frame = 0
BLAST of Sed0012151.1 vs. ExPASy Swiss-Prot
Match: Q54GD8 (PXMP2/4 family protein 3 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290223 PE=3 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.5e-18 Identity = 51/172 (29.65%), Postives = 96/172 (55.81%), Query Frame = 0
BLAST of Sed0012151.1 vs. ExPASy Swiss-Prot
Match: Q4IPX8 (Protein SYM1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=SYM1 PE=3 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 8.5e-17 Identity = 50/175 (28.57%), Postives = 91/175 (52.00%), Query Frame = 0
BLAST of Sed0012151.1 vs. ExPASy Swiss-Prot
Match: Q2TXA2 (Protein sym1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=sym1 PE=3 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.2e-15 Identity = 54/173 (31.21%), Postives = 87/173 (50.29%), Query Frame = 0
BLAST of Sed0012151.1 vs. ExPASy Swiss-Prot
Match: Q754F0 (Protein SYM1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=SYM1 PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 7.4e-13 Identity = 45/175 (25.71%), Postives = 80/175 (45.71%), Query Frame = 0
BLAST of Sed0012151.1 vs. ExPASy TrEMBL
Match: A0A6J1FSU4 (PXMP2/4 family protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111447830 PE=3 SV=1) HSP 1 Score: 425.6 bits (1093), Expect = 1.4e-115 Identity = 213/256 (83.20%), Postives = 231/256 (90.23%), Query Frame = 0
BLAST of Sed0012151.1 vs. ExPASy TrEMBL
Match: A0A6J1JW67 (PXMP2/4 family protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111488902 PE=3 SV=1) HSP 1 Score: 416.8 bits (1070), Expect = 6.6e-113 Identity = 208/255 (81.57%), Postives = 227/255 (89.02%), Query Frame = 0
BLAST of Sed0012151.1 vs. ExPASy TrEMBL
Match: A0A5D3E190 (PXMP2/4 family protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00770 PE=3 SV=1) HSP 1 Score: 413.7 bits (1062), Expect = 5.6e-112 Identity = 206/257 (80.16%), Postives = 226/257 (87.94%), Query Frame = 0
BLAST of Sed0012151.1 vs. ExPASy TrEMBL
Match: A0A1S3BY02 (PXMP2/4 family protein 4 OS=Cucumis melo OX=3656 GN=LOC103494798 PE=3 SV=1) HSP 1 Score: 413.7 bits (1062), Expect = 5.6e-112 Identity = 206/257 (80.16%), Postives = 226/257 (87.94%), Query Frame = 0
BLAST of Sed0012151.1 vs. ExPASy TrEMBL
Match: A0A0A0KT72 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000970 PE=3 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 8.0e-111 Identity = 204/257 (79.38%), Postives = 226/257 (87.94%), Query Frame = 0
BLAST of Sed0012151.1 vs. TAIR 10
Match: AT2G14860.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 298.5 bits (763), Expect = 5.0e-81 Identity = 148/213 (69.48%), Postives = 172/213 (80.75%), Query Frame = 0
BLAST of Sed0012151.1 vs. TAIR 10
Match: AT4G33905.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 295.8 bits (756), Expect = 3.2e-80 Identity = 156/257 (60.70%), Postives = 189/257 (73.54%), Query Frame = 0
BLAST of Sed0012151.1 vs. TAIR 10
Match: AT5G43140.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 232.3 bits (591), Expect = 4.4e-61 Identity = 113/216 (52.31%), Postives = 155/216 (71.76%), Query Frame = 0
BLAST of Sed0012151.1 vs. TAIR 10
Match: AT5G19750.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 97.1 bits (240), Expect = 2.2e-20 Identity = 54/179 (30.17%), Postives = 92/179 (51.40%), Query Frame = 0
BLAST of Sed0012151.1 vs. TAIR 10
Match: AT2G42770.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 75.1 bits (183), Expect = 9.0e-14 Identity = 37/130 (28.46%), Postives = 66/130 (50.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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