Sed0011412.1 (mRNA) Chayote v1

Overview


Name	Sed0011412.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Dirigent protein
Location	LG01: 62502659 .. 62503244 (+)
Sequence length	586
RNA-Seq Expression	Sed0011412.1
Synteny	Sed0011412.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGGCAAGTTCATGATCATATTTTGTTGCCTTTTGTTGTCGATGGCCATAAGTTCAACCATGGCAAACAAGGAACACTCGTTCGCAAACAAGTTAGACCCCAAAGTGTTGAAACCGAAGAAAGAAAAGGGGACTCATTTCCATCTCTACTGGCACGACATCGTGGGCGGGAACAACCCAACCAGCATCCCGGTGTTGCCACCGCTTAGCAACACCACATTTTTTGGGCTCGTCAACATGATCGACAACCCGTTGACCGTCGGCCCGAACCTGAATTCCAAGCTGGTGGGGAAGTCGCAGGGCCTGTTCGCAGGAGCCGCACAAGACGAGATAGGGCTTTTGATGGCCATGAACTTTGCCTTCACTTTTGGCAAATACAACGGCAGCTCTATTACTATTCTTGGGCGGAACCCTATTCTTAACGCCGTTTCGGAGATGCCCGTCGTCGGAGGGTCCGGCCGCTTCCGCTTCGCTAGAGGCTATGCTGAAGCTAGGACTTACTCTCTAAACGCCACCTCCTTTGATTCTACCGTTGAATATAACATTTATATCTTGCATTATTGATCTCTTTTATGTACTCGCC

mRNA sequence

ATGGCAGGCAAGTTCATGATCATATTTTGTTGCCTTTTGTTGTCGATGGCCATAAGTTCAACCATGGCAAACAAGGAACACTCGTTCGCAAACAAGTTAGACCCCAAAGTGTTGAAACCGAAGAAAGAAAAGGGGACTCATTTCCATCTCTACTGGCACGACATCGTGGGCGGGAACAACCCAACCAGCATCCCGGTGTTGCCACCGCTTAGCAACACCACATTTTTTGGGCTCGTCAACATGATCGACAACCCGTTGACCGTCGGCCCGAACCTGAATTCCAAGCTGGTGGGGAAGTCGCAGGGCCTGTTCGCAGGAGCCGCACAAGACGAGATAGGGCTTTTGATGGCCATGAACTTTGCCTTCACTTTTGGCAAATACAACGGCAGCTCTATTACTATTCTTGGGCGGAACCCTATTCTTAACGCCGTTTCGGAGATGCCCGTCGTCGGAGGGTCCGGCCGCTTCCGCTTCGCTAGAGGCTATGCTGAAGCTAGGACTTACTCTCTAAACGCCACCTCCTTTGATTCTACCGTTGAATATAACATTTATATCTTGCATTATTGATCTCTTTTATGTACTCGCC

Coding sequence (CDS)

ATGGCAGGCAAGTTCATGATCATATTTTGTTGCCTTTTGTTGTCGATGGCCATAAGTTCAACCATGGCAAACAAGGAACACTCGTTCGCAAACAAGTTAGACCCCAAAGTGTTGAAACCGAAGAAAGAAAAGGGGACTCATTTCCATCTCTACTGGCACGACATCGTGGGCGGGAACAACCCAACCAGCATCCCGGTGTTGCCACCGCTTAGCAACACCACATTTTTTGGGCTCGTCAACATGATCGACAACCCGTTGACCGTCGGCCCGAACCTGAATTCCAAGCTGGTGGGGAAGTCGCAGGGCCTGTTCGCAGGAGCCGCACAAGACGAGATAGGGCTTTTGATGGCCATGAACTTTGCCTTCACTTTTGGCAAATACAACGGCAGCTCTATTACTATTCTTGGGCGGAACCCTATTCTTAACGCCGTTTCGGAGATGCCCGTCGTCGGAGGGTCCGGCCGCTTCCGCTTCGCTAGAGGCTATGCTGAAGCTAGGACTTACTCTCTAAACGCCACCTCCTTTGATTCTACCGTTGAATATAACATTTATATCTTGCATTATTGA

Protein sequence

MAGKFMIIFCCLLLSMAISSTMANKEHSFANKLDPKVLKPKKEKGTHFHLYWHDIVGGNNPTSIPVLPPLSNTTFFGLVNMIDNPLTVGPNLNSKLVGKSQGLFAGAAQDEIGLLMAMNFAFTFGKYNGSSITILGRNPILNAVSEMPVVGGSGRFRFARGYAEARTYSLNATSFDSTVEYNIYILHY

Homology

[Close]

BLAST of Sed0011412.1 vs. NCBI nr
Match: XP_023512165.1 (dirigent protein 22-like [Cucurbita pepo subsp. pepo] >KAG6570355.1 Dirigent protein 20, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010236.1 Dirigent protein 20, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 281.6 bits (719), Expect = 5.1e-72
Identity = 143/188 (76.06%), Postives = 159/188 (84.57%), Query Frame = 0


Query: 1   MAGKFMIIFCCLLLSMAISSTMANKEHSFANKLDPKVLKPKKEKGTHFHLYWHDIVGGNN 60
           MA KF  +   LLLSMAI S+   KE+SFA+ LDPKVL+ KKEK THFH+YWHD+VGG  
Sbjct: 1   MASKFASL-GFLLLSMAIISSAMAKEYSFASNLDPKVLRLKKEKLTHFHMYWHDVVGGTK 60

Query: 61  PTSIPVLPPLSNTTFFGLVNMIDNPLTVGPNLNSKLVGKSQGLFAGAAQDEIGLLMAMNF 120
           PTS+ VLP LSN+T FGLVNM DNPLTVGP+  S+LVGKSQGL+A AAQ EIGLLMAMNF
Sbjct: 61  PTSVAVLPGLSNSTLFGLVNMFDNPLTVGPDPKSQLVGKSQGLYASAAQQEIGLLMAMNF 120

Query: 121 AFTFGKYNGSSITILGRNPILNAVSEMPVVGGSGRFRFARGYAEARTYSLNATSFDSTVE 180
           AFT+GKYNGSSITILGRNPILN V EMPVVGGSGRFRFARGYAEART+  NATS D+ VE
Sbjct: 121 AFTYGKYNGSSITILGRNPILNTVREMPVVGGSGRFRFARGYAEARTHFFNATSLDAIVE 180

Query: 181 YNIYILHY 189
           YNIY+LHY
Sbjct: 181 YNIYVLHY 187

[Close]

BLAST of Sed0011412.1 vs. NCBI nr
Match: XP_022944187.1 (dirigent protein 22-like [Cucurbita moschata])

HSP 1 Score: 279.6 bits (714), Expect = 1.9e-71
Identity = 142/188 (75.53%), Postives = 158/188 (84.04%), Query Frame = 0


Query: 1   MAGKFMIIFCCLLLSMAISSTMANKEHSFANKLDPKVLKPKKEKGTHFHLYWHDIVGGNN 60
           MA KF  +   LLLSMAI  +   KE+SFA+ LDPKVL+ KKEK THFH+YWHD+VGG  
Sbjct: 1   MASKFASL-GFLLLSMAIICSAMAKEYSFASNLDPKVLRLKKEKLTHFHMYWHDVVGGTK 60

Query: 61  PTSIPVLPPLSNTTFFGLVNMIDNPLTVGPNLNSKLVGKSQGLFAGAAQDEIGLLMAMNF 120
           PTS+ VLP LSN+T FGLVNM DNPLTVGP+  S+LVGKSQGL+A AAQ EIGLLMAMNF
Sbjct: 61  PTSVAVLPGLSNSTLFGLVNMFDNPLTVGPDPKSQLVGKSQGLYASAAQQEIGLLMAMNF 120

Query: 121 AFTFGKYNGSSITILGRNPILNAVSEMPVVGGSGRFRFARGYAEARTYSLNATSFDSTVE 180
           AFT+GKYNGSSITILGRNPILN V EMPVVGGSGRFRFARGYAEART+  NATS D+ VE
Sbjct: 121 AFTYGKYNGSSITILGRNPILNTVREMPVVGGSGRFRFARGYAEARTHFFNATSLDAIVE 180

Query: 181 YNIYILHY 189
           YNIY+LHY
Sbjct: 181 YNIYVLHY 187

[Close]

BLAST of Sed0011412.1 vs. NCBI nr
Match: XP_022986713.1 (dirigent protein 22-like [Cucurbita maxima])

HSP 1 Score: 278.9 bits (712), Expect = 3.3e-71
Identity = 141/188 (75.00%), Postives = 159/188 (84.57%), Query Frame = 0


Query: 1   MAGKFMIIFCCLLLSMAISSTMANKEHSFANKLDPKVLKPKKEKGTHFHLYWHDIVGGNN 60
           MA KF  +   L+LSMAI S+   KE+SFA+ LDPKVL+ K+EK THFH+YWHD+VGG  
Sbjct: 1   MASKFASL-GFLVLSMAIISSAMAKEYSFASNLDPKVLRLKEEKLTHFHMYWHDVVGGTK 60

Query: 61  PTSIPVLPPLSNTTFFGLVNMIDNPLTVGPNLNSKLVGKSQGLFAGAAQDEIGLLMAMNF 120
           PTS+ VLP LSN+T FGLVNM DNPLTVGP+  S+LVGKSQGL+A AAQ EIGLLMAMNF
Sbjct: 61  PTSVAVLPGLSNSTLFGLVNMFDNPLTVGPDPKSQLVGKSQGLYASAAQQEIGLLMAMNF 120

Query: 121 AFTFGKYNGSSITILGRNPILNAVSEMPVVGGSGRFRFARGYAEARTYSLNATSFDSTVE 180
           AFT+GKYNGSSITILGRNPILN V EMPVVGGSGRFRFARGYAEART+  NATS D+ VE
Sbjct: 121 AFTYGKYNGSSITILGRNPILNTVREMPVVGGSGRFRFARGYAEARTHFFNATSLDAIVE 180

Query: 181 YNIYILHY 189
           YNIY+LHY
Sbjct: 181 YNIYVLHY 187

[Close]

BLAST of Sed0011412.1 vs. NCBI nr
Match: XP_022958342.1 (dirigent protein 22-like [Cucurbita moschata])

HSP 1 Score: 273.9 bits (699), Expect = 1.1e-69
Identity = 142/188 (75.53%), Postives = 156/188 (82.98%), Query Frame = 0


Query: 1   MAGKFMIIFCCLLLSMAISSTMANKEHSFANKLDPKVLKPKKEKGTHFHLYWHDIVGGNN 60
           MA K + I C LLLSMA+SS MA  E+SFA+ L+PKVL+ KKEK TH HLYWHD+VGGN 
Sbjct: 1   MAAK-LAISCFLLLSMAMSSAMA-AEYSFASNLNPKVLRLKKEKLTHLHLYWHDVVGGNK 60

Query: 61  PTSIPVLPPLSNTTFFGLVNMIDNPLTVGPNLNSKLVGKSQGLFAGAAQDEIGLLMAMNF 120
           PTSI VLP LSNTT FGLVNM DNPLTVGP+  S+LVG+SQGL+A AAQ EIGLLMAMNF
Sbjct: 61  PTSIAVLPGLSNTTLFGLVNMFDNPLTVGPHPKSQLVGRSQGLYASAAQTEIGLLMAMNF 120

Query: 121 AFTFGKYNGSSITILGRNPILNAVSEMPVVGGSGRFRFARGYAEARTYSLNATSFDSTVE 180
            FT GKYNGSSI ILG NPILN V EMPVVGGSGRFRFARGYA+ART   NATS D+ VE
Sbjct: 121 VFTSGKYNGSSIAILGHNPILNTVREMPVVGGSGRFRFARGYAQARTQFFNATSLDAVVE 180

Query: 181 YNIYILHY 189
           YNIY+LHY
Sbjct: 181 YNIYVLHY 186

[Close]

BLAST of Sed0011412.1 vs. NCBI nr
Match: XP_022995914.1 (dirigent protein 22-like [Cucurbita maxima])

HSP 1 Score: 271.9 bits (694), Expect = 4.0e-69
Identity = 140/188 (74.47%), Postives = 155/188 (82.45%), Query Frame = 0


Query: 1   MAGKFMIIFCCLLLSMAISSTMANKEHSFANKLDPKVLKPKKEKGTHFHLYWHDIVGGNN 60
           MA K + I C LL SMA+SS MA  E+SF + L+PK+L+ KKEK THFHLYWHD+VGGN 
Sbjct: 1   MAAK-LAISCFLLFSMAMSSAMA-AEYSFTSNLNPKMLRLKKEKLTHFHLYWHDVVGGNK 60

Query: 61  PTSIPVLPPLSNTTFFGLVNMIDNPLTVGPNLNSKLVGKSQGLFAGAAQDEIGLLMAMNF 120
           PTSI VLP LSNTT FGLVNM DNPLTVGP+  S+LVG+SQGL+A AAQ EIGLLMAMNF
Sbjct: 61  PTSIAVLPGLSNTTLFGLVNMFDNPLTVGPHPKSQLVGRSQGLYASAAQTEIGLLMAMNF 120

Query: 121 AFTFGKYNGSSITILGRNPILNAVSEMPVVGGSGRFRFARGYAEARTYSLNATSFDSTVE 180
            FT GKYNGSSI ILG NPILN V EMPVVGGSGRFRFARGYA+ART   NATS D+ VE
Sbjct: 121 VFTSGKYNGSSIAILGHNPILNTVREMPVVGGSGRFRFARGYAQARTQFFNATSLDAVVE 180

Query: 181 YNIYILHY 189
           YNIY+LHY
Sbjct: 181 YNIYVLHY 186

[Close]

BLAST of Sed0011412.1 vs. ExPASy Swiss-Prot
Match: Q9C891 (Dirigent protein 20 OS=Arabidopsis thaliana OX=3702 GN=DIR20 PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 3.0e-51
Identity = 103/186 (55.38%), Postives = 136/186 (73.12%), Query Frame = 0


Query: 4   KFMIIFCCLLLSMAISSTMANKEHSFANKLDPKVL-KPKKEKGTHFHLYWHDIVGGNNPT 63
           K +      +L +A+ S+  + E  FA  +D K+L   KKEK THF +YWHDI+ G NPT
Sbjct: 3   KLIFFLAVQILFLAVVSSAGDGE-DFARTMDRKLLGLHKKEKLTHFKVYWHDILSGPNPT 62

Query: 64  SIPVLPPLSNTTFFGLVNMIDNPLTVGPNLNSKLVGKSQGLFAGAAQDEIGLLMAMNFAF 123
           SI + PP++N+++FG ++MIDN LT    +NS ++G++QG +AGAAQ E+G LMAMNFAF
Sbjct: 63  SIMIQPPVTNSSYFGAISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAF 122

Query: 124 TFGKYNGSSITILGRNPILNAVSEMPVVGGSGRFRFARGYAEARTYSLNATSFDSTVEYN 183
             GKYNGS+ITILGRN  L+ V EMP+VGGSG FRFARGY EART  +N  + D+TVEY+
Sbjct: 123 KTGKYNGSTITILGRNTALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYS 182

Query: 184 IYILHY 189
            Y+LHY
Sbjct: 183 CYVLHY 187

[Close]

BLAST of Sed0011412.1 vs. ExPASy Swiss-Prot
Match: Q9LID5 (Dirigent protein 7 OS=Arabidopsis thaliana OX=3702 GN=DIR7 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.2e-49
Identity = 102/188 (54.26%), Postives = 130/188 (69.15%), Query Frame = 0


Query: 1   MAGKFMIIFCCLLLSMAISSTMANKEHSFANKLDPKVLKPKKEKGTHFHLYWHDIVGGNN 60
           MA   +II   +LL  A+ S  A K  +FA  +D K    +KEK THF +YWHDI+ G+N
Sbjct: 1   MAKLILIIVTQILLIAAVVS--ARKGENFAKTIDKKHFGLRKEKLTHFRVYWHDILSGSN 60

Query: 61  PTSIPVLPPLSNTTFFGLVNMIDNPLTVGPNLNSKLVGKSQGLFAGAAQDEIGLLMAMNF 120
           P+S+ + PP+SN++FFG V +IDN LT    +NS LVG++QG++A   Q +   LM MNF
Sbjct: 61  PSSVVINPPISNSSFFGSVTVIDNRLTTEVAVNSTLVGQAQGIYAATGQRDASALMVMNF 120

Query: 121 AFTFGKYNGSSITILGRNPILNAVSEMPVVGGSGRFRFARGYAEARTYSLNATSFDSTVE 180
           AF  GKYNGSSI ILGRN +L  V EMPV+GGSG FRFARGY EART   +  S D+TVE
Sbjct: 121 AFKTGKYNGSSIAILGRNAVLTKVREMPVIGGSGLFRFARGYVEARTMWFDQKSGDATVE 180

Query: 181 YNIYILHY 189
           Y+ Y+LHY
Sbjct: 181 YSCYVLHY 186

[Close]

BLAST of Sed0011412.1 vs. ExPASy Swiss-Prot
Match: Q9C523 (Dirigent protein 19 OS=Arabidopsis thaliana OX=3702 GN=DIR19 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.7e-46
Identity = 89/159 (55.97%), Postives = 118/159 (74.21%), Query Frame = 0


Query: 33  LDPKVLKPKKEKGTHFHLYWHDIVGGNNPTSIPVLPP---LSNTTFFGLVNMIDNPLTVG 92
           L+   L  KKEK THF +YWHDIV G + +S+ ++ P    +  T FGL+ MIDNPLT+ 
Sbjct: 27  LESNFLHHKKEKLTHFRVYWHDIVTGQDSSSVSIMNPPKKYTGATGFGLMRMIDNPLTLT 86

Query: 93  PNLNSKLVGKSQGLFAGAAQDEIGLLMAMNFAFTFGKYNGSSITILGRNPILNAVSEMPV 152
           P L+SK+VG++QG +AG +++EIGLLMAMNFA   GKYNGS+IT+LGRN + + V EMPV
Sbjct: 87  PKLSSKMVGRAQGFYAGTSKEEIGLLMAMNFAILDGKYNGSTITVLGRNSVFDKVREMPV 146

Query: 153 VGGSGRFRFARGYAEARTYSLNATSFDSTVEYNIYILHY 189
           +GGSG FRFARGY +A T+  N  + ++ VEYN Y+LHY
Sbjct: 147 IGGSGLFRFARGYVQASTHEFNLKTGNAIVEYNCYLLHY 185

[Close]

BLAST of Sed0011412.1 vs. ExPASy Swiss-Prot
Match: Q9FI66 (Dirigent protein 3 OS=Arabidopsis thaliana OX=3702 GN=DIR3 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.2e-46
Identity = 99/189 (52.38%), Postives = 130/189 (68.78%), Query Frame = 0


Query: 4   KFMIIFCCLLLSMAISSTMANKEHSFANKLDPKVL-KPKKEKGTHFHLYWHDIVGGNNPT 63
           K ++I    +L +  ++        FA  ++ K L   KKEK TH  +YWHDIV G NP+
Sbjct: 3   KLILILTAQILLLTATALAGKNGEDFARTINRKHLGLGKKEKLTHLRVYWHDIVTGRNPS 62

Query: 64  SIPVLPPL---SNTTFFGLVNMIDNPLTVGPNLNSKLVGKSQGLFAGAAQDEIGLLMAMN 123
           SI +  P+   S++++FG + MIDN LT+   +NS +VG++QG++ GAAQ EIGLLMAMN
Sbjct: 63  SIRIQGPVAKYSSSSYFGSITMIDNALTLDVPINSTVVGQAQGMYVGAAQKEIGLLMAMN 122

Query: 124 FAFTFGKYNGSSITILGRNPILNAVSEMPVVGGSGRFRFARGYAEARTYSLNATSFDSTV 183
            AF  GKYNGS+ITILGRN +++ V EMPVVGGSG FRFARGY EART   +  + D+TV
Sbjct: 123 LAFKTGKYNGSTITILGRNTVMSKVREMPVVGGSGMFRFARGYVEARTKLFDMKTGDATV 182

Query: 184 EYNIYILHY 189
           E N YILHY
Sbjct: 183 ESNCYILHY 191

[Close]

BLAST of Sed0011412.1 vs. ExPASy Swiss-Prot
Match: Q9SS03 (Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.7e-41
Identity = 86/190 (45.26%), Postives = 130/190 (68.42%), Query Frame = 0


Query: 1   MAGKFMIIFCCLLLSMAISSTMANKEHSFANKLDPKVLKPKKEKGTHFHLYWHDIVGGNN 60
           MA  ++++   L L++ +++T+   + SF+  +       K +K TH H Y+HDIV G+ 
Sbjct: 1   MASLYLLLLLPLFLALILAATITESK-SFSTTVKAPYPGHKPDKLTHLHFYFHDIVSGDK 60

Query: 61  PTSIPVL-PPLSNT--TFFGLVNMIDNPLTVGPNLNSKLVGKSQGLFAGAAQDEIGLLMA 120
           PTS+ V   P +N+  T FGLV ++D+ LTVGP + S+ VG++QG++A A Q+++GLLMA
Sbjct: 61  PTSVQVANGPTTNSSATGFGLVAVVDDKLTVGPEITSEEVGRAQGMYASADQNKLGLLMA 120

Query: 121 MNFAFTFGKYNGSSITILGRNPILNAVSEMPVVGGSGRFRFARGYAEARTYSLNATSFDS 180
            N  FT GK++ S++ + GRNP+L+ V EMP++GG+G FRF RGYA A+T   N TS D+
Sbjct: 121 FNLVFTKGKFSDSTVAMYGRNPVLSKVREMPIIGGTGAFRFGRGYALAKTLVFNITSGDA 180

Query: 181 TVEYNIYILH 188
            VEYN+YI H
Sbjct: 181 VVEYNVYIWH 189

[Close]

BLAST of Sed0011412.1 vs. ExPASy TrEMBL
Match: A0A6J1FV40 (Dirigent protein OS=Cucurbita moschata OX=3662 GN=LOC111448711 PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 9.3e-72
Identity = 142/188 (75.53%), Postives = 158/188 (84.04%), Query Frame = 0


Query: 1   MAGKFMIIFCCLLLSMAISSTMANKEHSFANKLDPKVLKPKKEKGTHFHLYWHDIVGGNN 60
           MA KF  +   LLLSMAI  +   KE+SFA+ LDPKVL+ KKEK THFH+YWHD+VGG  
Sbjct: 1   MASKFASL-GFLLLSMAIICSAMAKEYSFASNLDPKVLRLKKEKLTHFHMYWHDVVGGTK 60

Query: 61  PTSIPVLPPLSNTTFFGLVNMIDNPLTVGPNLNSKLVGKSQGLFAGAAQDEIGLLMAMNF 120
           PTS+ VLP LSN+T FGLVNM DNPLTVGP+  S+LVGKSQGL+A AAQ EIGLLMAMNF
Sbjct: 61  PTSVAVLPGLSNSTLFGLVNMFDNPLTVGPDPKSQLVGKSQGLYASAAQQEIGLLMAMNF 120

Query: 121 AFTFGKYNGSSITILGRNPILNAVSEMPVVGGSGRFRFARGYAEARTYSLNATSFDSTVE 180
           AFT+GKYNGSSITILGRNPILN V EMPVVGGSGRFRFARGYAEART+  NATS D+ VE
Sbjct: 121 AFTYGKYNGSSITILGRNPILNTVREMPVVGGSGRFRFARGYAEARTHFFNATSLDAIVE 180

Query: 181 YNIYILHY 189
           YNIY+LHY
Sbjct: 181 YNIYVLHY 187

[Close]

BLAST of Sed0011412.1 vs. ExPASy TrEMBL
Match: A0A6J1JHC5 (Dirigent protein OS=Cucurbita maxima OX=3661 GN=LOC111484383 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.6e-71
Identity = 141/188 (75.00%), Postives = 159/188 (84.57%), Query Frame = 0


Query: 1   MAGKFMIIFCCLLLSMAISSTMANKEHSFANKLDPKVLKPKKEKGTHFHLYWHDIVGGNN 60
           MA KF  +   L+LSMAI S+   KE+SFA+ LDPKVL+ K+EK THFH+YWHD+VGG  
Sbjct: 1   MASKFASL-GFLVLSMAIISSAMAKEYSFASNLDPKVLRLKEEKLTHFHMYWHDVVGGTK 60

Query: 61  PTSIPVLPPLSNTTFFGLVNMIDNPLTVGPNLNSKLVGKSQGLFAGAAQDEIGLLMAMNF 120
           PTS+ VLP LSN+T FGLVNM DNPLTVGP+  S+LVGKSQGL+A AAQ EIGLLMAMNF
Sbjct: 61  PTSVAVLPGLSNSTLFGLVNMFDNPLTVGPDPKSQLVGKSQGLYASAAQQEIGLLMAMNF 120

Query: 121 AFTFGKYNGSSITILGRNPILNAVSEMPVVGGSGRFRFARGYAEARTYSLNATSFDSTVE 180
           AFT+GKYNGSSITILGRNPILN V EMPVVGGSGRFRFARGYAEART+  NATS D+ VE
Sbjct: 121 AFTYGKYNGSSITILGRNPILNTVREMPVVGGSGRFRFARGYAEARTHFFNATSLDAIVE 180

Query: 181 YNIYILHY 189
           YNIY+LHY
Sbjct: 181 YNIYVLHY 187

[Close]

BLAST of Sed0011412.1 vs. ExPASy TrEMBL
Match: A0A6J1H1K7 (Dirigent protein OS=Cucurbita moschata OX=3662 GN=LOC111459590 PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 5.1e-70
Identity = 142/188 (75.53%), Postives = 156/188 (82.98%), Query Frame = 0


Query: 1   MAGKFMIIFCCLLLSMAISSTMANKEHSFANKLDPKVLKPKKEKGTHFHLYWHDIVGGNN 60
           MA K + I C LLLSMA+SS MA  E+SFA+ L+PKVL+ KKEK TH HLYWHD+VGGN 
Sbjct: 1   MAAK-LAISCFLLLSMAMSSAMA-AEYSFASNLNPKVLRLKKEKLTHLHLYWHDVVGGNK 60

Query: 61  PTSIPVLPPLSNTTFFGLVNMIDNPLTVGPNLNSKLVGKSQGLFAGAAQDEIGLLMAMNF 120
           PTSI VLP LSNTT FGLVNM DNPLTVGP+  S+LVG+SQGL+A AAQ EIGLLMAMNF
Sbjct: 61  PTSIAVLPGLSNTTLFGLVNMFDNPLTVGPHPKSQLVGRSQGLYASAAQTEIGLLMAMNF 120

Query: 121 AFTFGKYNGSSITILGRNPILNAVSEMPVVGGSGRFRFARGYAEARTYSLNATSFDSTVE 180
            FT GKYNGSSI ILG NPILN V EMPVVGGSGRFRFARGYA+ART   NATS D+ VE
Sbjct: 121 VFTSGKYNGSSIAILGHNPILNTVREMPVVGGSGRFRFARGYAQARTQFFNATSLDAVVE 180

Query: 181 YNIYILHY 189
           YNIY+LHY
Sbjct: 181 YNIYVLHY 186

[Close]

BLAST of Sed0011412.1 vs. ExPASy TrEMBL
Match: A0A6J1K783 (Dirigent protein OS=Cucurbita maxima OX=3661 GN=LOC111491295 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.9e-69
Identity = 140/188 (74.47%), Postives = 155/188 (82.45%), Query Frame = 0


Query: 1   MAGKFMIIFCCLLLSMAISSTMANKEHSFANKLDPKVLKPKKEKGTHFHLYWHDIVGGNN 60
           MA K + I C LL SMA+SS MA  E+SF + L+PK+L+ KKEK THFHLYWHD+VGGN 
Sbjct: 1   MAAK-LAISCFLLFSMAMSSAMA-AEYSFTSNLNPKMLRLKKEKLTHFHLYWHDVVGGNK 60

Query: 61  PTSIPVLPPLSNTTFFGLVNMIDNPLTVGPNLNSKLVGKSQGLFAGAAQDEIGLLMAMNF 120
           PTSI VLP LSNTT FGLVNM DNPLTVGP+  S+LVG+SQGL+A AAQ EIGLLMAMNF
Sbjct: 61  PTSIAVLPGLSNTTLFGLVNMFDNPLTVGPHPKSQLVGRSQGLYASAAQTEIGLLMAMNF 120

Query: 121 AFTFGKYNGSSITILGRNPILNAVSEMPVVGGSGRFRFARGYAEARTYSLNATSFDSTVE 180
            FT GKYNGSSI ILG NPILN V EMPVVGGSGRFRFARGYA+ART   NATS D+ VE
Sbjct: 121 VFTSGKYNGSSIAILGHNPILNTVREMPVVGGSGRFRFARGYAQARTQFFNATSLDAVVE 180

Query: 181 YNIYILHY 189
           YNIY+LHY
Sbjct: 181 YNIYVLHY 186

[Close]

BLAST of Sed0011412.1 vs. ExPASy TrEMBL
Match: A0A0A0KX42 (Dirigent protein OS=Cucumis sativus OX=3659 GN=Csa_4G280650 PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.4e-67
Identity = 131/188 (69.68%), Postives = 153/188 (81.38%), Query Frame = 0


Query: 1   MAGKFMIIFCCLLLSMAISSTMANKEHSFANKLDPKVLKPKKEKGTHFHLYWHDIVGGNN 60
           M  KF   F C LL   ISS MA+ + SFA +L+PKVLK KKEK T FHLYWHD+VGG+N
Sbjct: 1   MGSKF--FFTCCLLWCLISSAMASDDDSFATRLNPKVLKLKKEKLTRFHLYWHDVVGGSN 60

Query: 61  PTSIPVLPPLSNTTFFGLVNMIDNPLTVGPNLNSKLVGKSQGLFAGAAQDEIGLLMAMNF 120
           PTS+PVLP L+N T FGL+NM DNPLTVGP+  S+LVG+SQGL+A  AQ EIGLLMAMNF
Sbjct: 61  PTSVPVLPRLNNVTLFGLINMFDNPLTVGPDPKSRLVGRSQGLYASTAQHEIGLLMAMNF 120

Query: 121 AFTFGKYNGSSITILGRNPILNAVSEMPVVGGSGRFRFARGYAEARTYSLNATSFDSTVE 180
           AFT+GKY GSSITILGRNPILN V EMPVVGG+GRFRFA+G+A A+T   NAT+ D+ VE
Sbjct: 121 AFTYGKYKGSSITILGRNPILNQVREMPVVGGTGRFRFAKGHALAKTQYFNATTLDAVVE 180

Query: 181 YNIYILHY 189
           Y+IY+LHY
Sbjct: 181 YDIYVLHY 186

[Close]

BLAST of Sed0011412.1 vs. TAIR 10
Match: AT1G55210.1 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 203.0 bits (515), Expect = 2.1e-52
Identity = 103/186 (55.38%), Postives = 136/186 (73.12%), Query Frame = 0


Query: 4   KFMIIFCCLLLSMAISSTMANKEHSFANKLDPKVL-KPKKEKGTHFHLYWHDIVGGNNPT 63
           K +      +L +A+ S+  + E  FA  +D K+L   KKEK THF +YWHDI+ G NPT
Sbjct: 3   KLIFFLAVQILFLAVVSSAGDGE-DFARTMDRKLLGLHKKEKLTHFKVYWHDILSGPNPT 62

Query: 64  SIPVLPPLSNTTFFGLVNMIDNPLTVGPNLNSKLVGKSQGLFAGAAQDEIGLLMAMNFAF 123
           SI + PP++N+++FG ++MIDN LT    +NS ++G++QG +AGAAQ E+G LMAMNFAF
Sbjct: 63  SIMIQPPVTNSSYFGAISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAF 122

Query: 124 TFGKYNGSSITILGRNPILNAVSEMPVVGGSGRFRFARGYAEARTYSLNATSFDSTVEYN 183
             GKYNGS+ITILGRN  L+ V EMP+VGGSG FRFARGY EART  +N  + D+TVEY+
Sbjct: 123 KTGKYNGSTITILGRNTALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYS 182

Query: 184 IYILHY 189
            Y+LHY
Sbjct: 183 CYVLHY 187

[Close]

BLAST of Sed0011412.1 vs. TAIR 10
Match: AT1G55210.2 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 203.0 bits (515), Expect = 2.1e-52
Identity = 103/186 (55.38%), Postives = 136/186 (73.12%), Query Frame = 0


Query: 4   KFMIIFCCLLLSMAISSTMANKEHSFANKLDPKVL-KPKKEKGTHFHLYWHDIVGGNNPT 63
           K +      +L +A+ S+  + E  FA  +D K+L   KKEK THF +YWHDI+ G NPT
Sbjct: 3   KLIFFLAVQILFLAVVSSAGDGE-DFARTMDRKLLGLHKKEKLTHFKVYWHDILSGPNPT 62

Query: 64  SIPVLPPLSNTTFFGLVNMIDNPLTVGPNLNSKLVGKSQGLFAGAAQDEIGLLMAMNFAF 123
           SI + PP++N+++FG ++MIDN LT    +NS ++G++QG +AGAAQ E+G LMAMNFAF
Sbjct: 63  SIMIQPPVTNSSYFGAISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAF 122

Query: 124 TFGKYNGSSITILGRNPILNAVSEMPVVGGSGRFRFARGYAEARTYSLNATSFDSTVEYN 183
             GKYNGS+ITILGRN  L+ V EMP+VGGSG FRFARGY EART  +N  + D+TVEY+
Sbjct: 123 KTGKYNGSTITILGRNTALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYS 182

Query: 184 IYILHY 189
            Y+LHY
Sbjct: 183 CYVLHY 187

[Close]

BLAST of Sed0011412.1 vs. TAIR 10
Match: AT3G13650.1 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 196.8 bits (499), Expect = 1.5e-50
Identity = 102/188 (54.26%), Postives = 130/188 (69.15%), Query Frame = 0


Query: 1   MAGKFMIIFCCLLLSMAISSTMANKEHSFANKLDPKVLKPKKEKGTHFHLYWHDIVGGNN 60
           MA   +II   +LL  A+ S  A K  +FA  +D K    +KEK THF +YWHDI+ G+N
Sbjct: 1   MAKLILIIVTQILLIAAVVS--ARKGENFAKTIDKKHFGLRKEKLTHFRVYWHDILSGSN 60

Query: 61  PTSIPVLPPLSNTTFFGLVNMIDNPLTVGPNLNSKLVGKSQGLFAGAAQDEIGLLMAMNF 120
           P+S+ + PP+SN++FFG V +IDN LT    +NS LVG++QG++A   Q +   LM MNF
Sbjct: 61  PSSVVINPPISNSSFFGSVTVIDNRLTTEVAVNSTLVGQAQGIYAATGQRDASALMVMNF 120

Query: 121 AFTFGKYNGSSITILGRNPILNAVSEMPVVGGSGRFRFARGYAEARTYSLNATSFDSTVE 180
           AF  GKYNGSSI ILGRN +L  V EMPV+GGSG FRFARGY EART   +  S D+TVE
Sbjct: 121 AFKTGKYNGSSIAILGRNAVLTKVREMPVIGGSGLFRFARGYVEARTMWFDQKSGDATVE 180

Query: 181 YNIYILHY 189
           Y+ Y+LHY
Sbjct: 181 YSCYVLHY 186

[Close]

BLAST of Sed0011412.1 vs. TAIR 10
Match: AT1G58170.1 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 187.2 bits (474), Expect = 1.2e-47
Identity = 89/159 (55.97%), Postives = 118/159 (74.21%), Query Frame = 0


Query: 33  LDPKVLKPKKEKGTHFHLYWHDIVGGNNPTSIPVLPP---LSNTTFFGLVNMIDNPLTVG 92
           L+   L  KKEK THF +YWHDIV G + +S+ ++ P    +  T FGL+ MIDNPLT+ 
Sbjct: 27  LESNFLHHKKEKLTHFRVYWHDIVTGQDSSSVSIMNPPKKYTGATGFGLMRMIDNPLTLT 86

Query: 93  PNLNSKLVGKSQGLFAGAAQDEIGLLMAMNFAFTFGKYNGSSITILGRNPILNAVSEMPV 152
           P L+SK+VG++QG +AG +++EIGLLMAMNFA   GKYNGS+IT+LGRN + + V EMPV
Sbjct: 87  PKLSSKMVGRAQGFYAGTSKEEIGLLMAMNFAILDGKYNGSTITVLGRNSVFDKVREMPV 146

Query: 153 VGGSGRFRFARGYAEARTYSLNATSFDSTVEYNIYILHY 189
           +GGSG FRFARGY +A T+  N  + ++ VEYN Y+LHY
Sbjct: 147 IGGSGLFRFARGYVQASTHEFNLKTGNAIVEYNCYLLHY 185

[Close]

BLAST of Sed0011412.1 vs. TAIR 10
Match: AT5G49040.1 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 186.8 bits (473), Expect = 1.6e-47
Identity = 99/189 (52.38%), Postives = 130/189 (68.78%), Query Frame = 0


Query: 4   KFMIIFCCLLLSMAISSTMANKEHSFANKLDPKVL-KPKKEKGTHFHLYWHDIVGGNNPT 63
           K ++I    +L +  ++        FA  ++ K L   KKEK TH  +YWHDIV G NP+
Sbjct: 3   KLILILTAQILLLTATALAGKNGEDFARTINRKHLGLGKKEKLTHLRVYWHDIVTGRNPS 62

Query: 64  SIPVLPPL---SNTTFFGLVNMIDNPLTVGPNLNSKLVGKSQGLFAGAAQDEIGLLMAMN 123
           SI +  P+   S++++FG + MIDN LT+   +NS +VG++QG++ GAAQ EIGLLMAMN
Sbjct: 63  SIRIQGPVAKYSSSSYFGSITMIDNALTLDVPINSTVVGQAQGMYVGAAQKEIGLLMAMN 122

Query: 124 FAFTFGKYNGSSITILGRNPILNAVSEMPVVGGSGRFRFARGYAEARTYSLNATSFDSTV 183
            AF  GKYNGS+ITILGRN +++ V EMPVVGGSG FRFARGY EART   +  + D+TV
Sbjct: 123 LAFKTGKYNGSTITILGRNTVMSKVREMPVVGGSGMFRFARGYVEARTKLFDMKTGDATV 182

Query: 184 EYNIYILHY 189
           E N YILHY
Sbjct: 183 ESNCYILHY 191

The following BLAST results are available for this feature:

BLAST of Sed0011412.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023512165.1	5.1e-72	76.06	dirigent protein 22-like [Cucurbita pepo subsp. pepo] >KAG6570355.1 Dirigent pro...	[more]
XP_022944187.1	1.9e-71	75.53	dirigent protein 22-like [Cucurbita moschata]	[more]
XP_022986713.1	3.3e-71	75.00	dirigent protein 22-like [Cucurbita maxima]	[more]
XP_022958342.1	1.1e-69	75.53	dirigent protein 22-like [Cucurbita moschata]	[more]
XP_022995914.1	4.0e-69	74.47	dirigent protein 22-like [Cucurbita maxima]	[more]

BLAST of Sed0011412.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C891	3.0e-51	55.38	Dirigent protein 20 OS=Arabidopsis thaliana OX=3702 GN=DIR20 PE=2 SV=1	[more]
Q9LID5	2.2e-49	54.26	Dirigent protein 7 OS=Arabidopsis thaliana OX=3702 GN=DIR7 PE=2 SV=1	[more]
Q9C523	1.7e-46	55.97	Dirigent protein 19 OS=Arabidopsis thaliana OX=3702 GN=DIR19 PE=2 SV=1	[more]
Q9FI66	2.2e-46	52.38	Dirigent protein 3 OS=Arabidopsis thaliana OX=3702 GN=DIR3 PE=3 SV=1	[more]
Q9SS03	3.7e-41	45.26	Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1	[more]

BLAST of Sed0011412.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FV40	9.3e-72	75.53	Dirigent protein OS=Cucurbita moschata OX=3662 GN=LOC111448711 PE=3 SV=1	[more]
A0A6J1JHC5	1.6e-71	75.00	Dirigent protein OS=Cucurbita maxima OX=3661 GN=LOC111484383 PE=3 SV=1	[more]
A0A6J1H1K7	5.1e-70	75.53	Dirigent protein OS=Cucurbita moschata OX=3662 GN=LOC111459590 PE=3 SV=1	[more]
A0A6J1K783	1.9e-69	74.47	Dirigent protein OS=Cucurbita maxima OX=3661 GN=LOC111491295 PE=3 SV=1	[more]
A0A0A0KX42	2.4e-67	69.68	Dirigent protein OS=Cucumis sativus OX=3659 GN=Csa_4G280650 PE=3 SV=1	[more]

BLAST of Sed0011412.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55210.1	2.1e-52	55.38	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT1G55210.2	2.1e-52	55.38	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT3G13650.1	1.5e-50	54.26	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT1G58170.1	1.2e-47	55.97	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT5G49040.1	1.6e-47	52.38	Disease resistance-responsive (dirigent-like protein) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044859	Allene oxide cyclase/Dirigent protein	GENE3D	2.40.480.10		coord: 34..185 e-value: 5.7E-17 score: 63.8
IPR004265	Dirigent protein	PFAM	PF03018	Dirigent	coord: 46..185 e-value: 2.2E-51 score: 173.5
None	No IPR available	PANTHER	PTHR21495:SF190	DIRIGENT PROTEIN 7	coord: 7..187
None	No IPR available	PANTHER	PTHR21495	NUCLEOPORIN-RELATED	coord: 7..187

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0011412	Sed0011412	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0011412.1-exon	Sed0011412.1-exon-LG01:62502659..62503244	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0011412.1-cds	Sed0011412.1-cds-LG01:62502659..62503225	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0011412.1-three_prime_utr	Sed0011412.1-three_prime_utr-LG01:62503226..62503244	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0011412.1	Sed0011412.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0048046	apoplast