Sed0011217.1 (mRNA) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTCTCTCATTCCCCTCTCAAAGAAAGATTACTCATTTTCAAAACCTCAATCTAGAGAGAGAGAAAGAAGTAACAAGTTCAGAGAGAGAGAAAAATGGAAGAGACAAAATCCAGATTCCAGAGGATTTGTGTTTTTTGTGGAAGCAGTTCTGGGAAGAAGCCTAGCTACCAATCAGCTGCTGTTGAACTTGGCAAAGAATTGGTACTTTCTTTTCTCCATTTTCCAACAATCCATGGAAATCAAGATCCAATTTTGATTTTATTTCATGTTCATTTTGTGTTTTCATGGTTTTTTTCTTTGTGGGTTTTGCATTTTGTTCAAAACCCATATGGAAAAATCCCATCTTTATTACTCCCAAATATTGTTTTATTGACTTGGGGAAGCAAATTCAACTATAGTTACAAAAATTCATCTTCTTAACTTTCCCTTTTAATAATGCAAATTGAGCATTTTCTATAATTTCTTCTCCTTTTCAAGAAAGTCTCACCTCTTGATACTAAATACATATTTCAATCCAGCGGCTTAAGCTTTCGAGTTTGGGTTTGAAGTTTTGAGGAAGGAGATGGAATAGGGTTTATGTTTATCTTCAGCGATGAGTGAGAGATAAAAAGAATTAGAGAGAGACAGTAAGGTTTGAGCTGTAATCTGCCTGTCAGTTGAGCAGCCTTCTTGCATGATCTAAAAAAGCTCTAATTTATCAAAAATTGAAGATTTATTTTTACAATATCAGGAAATTAAAATAATTGAAGGCTTTGTATACATAAATATTTTCCACTGGGAAACCAGACGTGCTTGCCTGAAATGATGAACTTGGTCATCTTCTTCGCACTTTTCTATGCCCCGTTTTTTTCCCATTTATCATTTCATTTCATTTCCCAATTCTCATTTTAAATTCTACTTTAAATTTTTCCTCTTTTTTTTTCAATTTTTTCTCTTGTTATGATGATTAAACTGTGCCACGTGTTGATTGATGTGTGTGTGTGATTCTTTTGAAGGTGGAAAGAAGAATTGATCTTGTTTATGGAGGTGGGAGCGTGGGATTGATGGGTCTGGTTTCTCAGGCTGTTCATGATGGCGGCCGCCATGTTCTAGGGTTTGTTTCTTTTCTTCATCATTTCATCTTCTAAATTCATGACATCATTCCAATCACCTTTAAATTTTTTTTCCTTGATATAATTAAATTTAGTTCAATCTTATCCCTTCTAGTTTATGAATTGATTTGTGATTTTACATGATTCATCATTGATTTTCACTAATTGGTATTCTATTCTCTACTAATTAGCTTAGGTTCAGTTTTTTTAGCTTTAGTGGAGAATCGGGAGGTTGAAAGAAGCCCATGTATTTTACAATGAAGTTTTCTTATGTTTCATTGATTGATTATCTATTTGGGCCTTATGACCCCATGTTAGATTAGAAACATGAAGTTGATTTAAAAACAAAGTGATATTGGAATGAGCTTATATATATTACAAAGGTTGTGACCTTTCTAATTTAGGATCTTCCAATATAAGCTGCTATTATTAACTTTCTTATATGAATCATAAAACATATCTATTGATTTTTAATGTTAGTAAAATACCAAATGGGTCGGTGGCGCAATTGATTGTCTGGTTTGATGTTAATCTATTTCTACTCCACATGTGTTTAATTCTTATAAACAATATTTGTAATTTCTCTTTCCCCAACTTGCACTAAAAAAAAACTATCCATGAGTAAAATGGGTTTTAGTATTTTTCTTTTTGCTTTTTGAAATTTAAGATTGTATTTACCCCAATTCTTGTTAAGGTTTCATCTAAGGTAGTAGTAAGTGAATCATAACCTTTGTTTTCTTTTACAGGACAATTAAAATGTATATAATGTAATGAAAATTATGTATTTCGCCTAATTGTCTTAAGTTAAAATTTTTAAAACTAATAACAAAAAAAAAAATTGTATGGTTAACAAGCGGGCCTTAGCAATTGTTTATCTTTGGTAGCTCAAATTATCAAAATTTTAATGTTGGTGTTTATTAAGATAAATACCTAGTCAATATGCTTCTGTTGTGTTAATCATCAAGAGAATGTTTGAGTATCAATACTACTTGGACGAACAAAAAAGTTATAAATTCAATTCATAAAATGTCACCGGCTTATAAATTAGTTTTCTACAAATTTTCTTTACAATCAAATTTTGTAGAGTGAATCAACTTGTTTCTAGAGGATAGTTATAAGTTAGATTAAATTTATAAAAAAAAAGAGAAAAAAAAAACTTTTATGTGTGAACAAATGAAAATAAAAAATGCTTTGGAAGGGTAGCTAGTAAAAAGACATTTTTCTTTTAGGGAAATTAACTTTTAGACTAGTTGTTGTCTGAAAAGAAGATGGGGACTTTTCAGGAACTCTACTTGATTGAAACCCAAACATTTGGGGTTTGAATGTTGGGTCTTTGCATTCATCACGAGGTCTGTCTATTGGATTTATATTGTCCCCTCCATTTCTTGGGGACATAAACCTCATGCTTTTGCTTCCAAATTTATGTCTTTTTTACCTATTTTTGTTAAATATTGGAAACCGACAGTTTTATTTCATTATTATTTCTAGAGGAATTTATGGCTTTTGAACTTCCATGTTTTGCAACTTAATTACAACATTACTAGAAAGCTATCAAATGATTATGTTGATCTTTGTGTTTTTGTCTGTTTTGCAGAATAATTCCAAGAACCCTAATGCCTGTTGAGGTACATAAACCTAAATTTTACATTTATAGCATTTATTTCTTTACTTTTAATTAATTCATGGCTAATAAGTTTATAAATTTTTAATATGTTTAGATAACTGGTGAGACGGTTGGGGAAGTTAAACCCGTGTCGGATATGCACCAAAGGAAGGCCGAGATGGCACGACAAGCTGATGCTTTCATTGCTTTACCTGGTATATCCTCACGGCCCCATATGTGAAATTTGTTGGTTTTGGGTTCGAATACGGAAAAATTTAATGACATTTGAATCACAGGAGGATATGGGACCCTTGAAGAGCTTCTTGAAGTTATCACTTGGGCACAACTTGGAATTCATCGCAAGCCAGTGAGTACTTCAAAATTGTATATATCATTTGAATATCTATTTTTGTATGAACATAGCCACATTAAAATTCTCTAATTTTCACTTAAAATGGCAGACAGTTGAAACATTTGGTCTCATCTCTAGAAGACATGTCGTGTTCAAGGCATAATGATATAAAAATTCTTCATTTTGTCTGTTTGAAAACTGTTGAAATCATGATAACATTTTCACATGATAACCATGTTCTAGTTTATATAGCCCTCCATTTTATAATTCCATGATTATTAACCTTATCATTTCTCATGTCTTTTGGAGAACAAACCAAAAAGAGATCCCATTTTCTAACACCCTTTTGCAAGAGAAATTAAACAAGTTATAGGATTCCCATTCTCCTTTTCAATTCCTAGAAGGTTAGAACTTTGAGATGAATTGCAACCGAAACATACTCGGTTTAGTCAAGCGTTTGATATGGATAACGGATCAACCCTTAATCCGAATTCGAGGCACAATGACAATCCTTGGAATAGAATCAAAACATGTGAAAACTTGCTCCCAATTCACGTGGGAAAGATTTCAAACTTAAAAAGATTTCCATCCCAATCATGACACAATTATGAATTCAAAAATGCACATTAAATTGCTGGTCAAACAAGGCTCTTTGATTAATTAAGGGAAGAAAATGAATTAAAATTTGCAGGTGGGACTTTTGAATGTGGATGGATATTACAATTCGTTGCTGAGTTTCATAGATAAGGCAGTTGATGAAGGCTTTGTTTCGCCAACTGCACGTCGAATTATTGTGTCTGCTCCAACTGCCAAACTTTTAGTCAGACAACTTGAGGTATTTTATTTATTTATTTTTAAAAAATTCAATAAATATTTTAAGGTCACTGTGCCCTTAAATCAAAAGGCAAGGGGGTAGGGTACCCCTCGAACACTTTCCCATTTCTACAGGAAAAGGCAGTGTCCTTTGTTTAATTATATTTTAATTAATTAGCATTTGGCCCCTGGAGAGTGGGGTATTTACAAGAGAGGAATTTTGAGTTATGTTTTATTGTTTGGTAATTACGACAGGAATACGTACCGGAGTACGACGAGATAACGTCACAGTTAGTGTGGGAGGATGTTGAAAGGAGAAGCTACGTGGCCGAATCAGAGGTTGCCACGTAAAAACCTGAAGCTTTTGTGATGGAAAAGGGGGTGTTTTGTCGTCACTTGGGTATATAATATTTATATATAGAAATATATATATATATATATATGAGCAAAGCATGTGATCTTTGCATAGGGCAGCAACTTCCAACACAGGGAACTATC ATTCTCTCATTCCCCTCTCAAAGAAAGATTACTCATTTTCAAAACCTCAATCTAGAGAGAGAGAAAGAAGTAACAAGTTCAGAGAGAGAGAAAAATGGAAGAGACAAAATCCAGATTCCAGAGGATTTGTGTTTTTTGTGGAAGCAGTTCTGGGAAGAAGCCTAGCTACCAATCAGCTGCTGTTGAACTTGGCAAAGAATTGGTGGAAAGAAGAATTGATCTTGTTTATGGAGGTGGGAGCGTGGGATTGATGGGTCTGGTTTCTCAGGCTGTTCATGATGGCGGCCGCCATGTTCTAGGAATAATTCCAAGAACCCTAATGCCTGTTGAGATAACTGGTGAGACGGTTGGGGAAGTTAAACCCGTGTCGGATATGCACCAAAGGAAGGCCGAGATGGCACGACAAGCTGATGCTTTCATTGCTTTACCTGGAGGATATGGGACCCTTGAAGAGCTTCTTGAAGTTATCACTTGGGCACAACTTGGAATTCATCGCAAGCCAGTGGGACTTTTGAATGTGGATGGATATTACAATTCGTTGCTGAGTTTCATAGATAAGGCAGTTGATGAAGGCTTTGTTTCGCCAACTGCACGTCGAATTATTGTGTCTGCTCCAACTGCCAAACTTTTAGTCAGACAACTTGAGGAATACGTACCGGAGTACGACGAGATAACGTCACAGTTAGTGTGGGAGGATGTTGAAAGGAGAAGCTACGTGGCCGAATCAGAGGTTGCCACGTAAAAACCTGAAGCTTTTGTGATGGAAAAGGGGGTGTTTTGTCGTCACTTGGGTATATAATATTTATATATAGAAATATATATATATATATATATGAGCAAAGCATGTGATCTTTGCATAGGGCAGCAACTTCCAACACAGGGAACTATC ATGGAAGAGACAAAATCCAGATTCCAGAGGATTTGTGTTTTTTGTGGAAGCAGTTCTGGGAAGAAGCCTAGCTACCAATCAGCTGCTGTTGAACTTGGCAAAGAATTGGTGGAAAGAAGAATTGATCTTGTTTATGGAGGTGGGAGCGTGGGATTGATGGGTCTGGTTTCTCAGGCTGTTCATGATGGCGGCCGCCATGTTCTAGGAATAATTCCAAGAACCCTAATGCCTGTTGAGATAACTGGTGAGACGGTTGGGGAAGTTAAACCCGTGTCGGATATGCACCAAAGGAAGGCCGAGATGGCACGACAAGCTGATGCTTTCATTGCTTTACCTGGAGGATATGGGACCCTTGAAGAGCTTCTTGAAGTTATCACTTGGGCACAACTTGGAATTCATCGCAAGCCAGTGGGACTTTTGAATGTGGATGGATATTACAATTCGTTGCTGAGTTTCATAGATAAGGCAGTTGATGAAGGCTTTGTTTCGCCAACTGCACGTCGAATTATTGTGTCTGCTCCAACTGCCAAACTTTTAGTCAGACAACTTGAGGAATACGTACCGGAGTACGACGAGATAACGTCACAGTTAGTGTGGGAGGATGTTGAAAGGAGAAGCTACGTGGCCGAATCAGAGGTTGCCACGTAA MEETKSRFQRICVFCGSSSGKKPSYQSAAVELGKELVERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGIIPRTLMPVEITGETVGEVKPVSDMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKLLVRQLEEYVPEYDEITSQLVWEDVERRSYVAESEVAT Homology
BLAST of Sed0011217.1 vs. NCBI nr
Match: XP_038903675.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 isoform X1 [Benincasa hispida]) HSP 1 Score: 416.0 bits (1068), Expect = 2.0e-112 Identity = 208/215 (96.74%), Postives = 214/215 (99.53%), Query Frame = 0
BLAST of Sed0011217.1 vs. NCBI nr
Match: XP_004136507.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Cucumis sativus]) HSP 1 Score: 415.6 bits (1067), Expect = 2.6e-112 Identity = 208/215 (96.74%), Postives = 212/215 (98.60%), Query Frame = 0
BLAST of Sed0011217.1 vs. NCBI nr
Match: XP_022144579.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Momordica charantia]) HSP 1 Score: 414.8 bits (1065), Expect = 4.4e-112 Identity = 208/215 (96.74%), Postives = 213/215 (99.07%), Query Frame = 0
BLAST of Sed0011217.1 vs. NCBI nr
Match: XP_022983101.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 isoform X1 [Cucurbita maxima] >XP_023528160.1 cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 405.6 bits (1041), Expect = 2.7e-109 Identity = 203/215 (94.42%), Postives = 211/215 (98.14%), Query Frame = 0
BLAST of Sed0011217.1 vs. NCBI nr
Match: XP_022934751.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Cucurbita moschata]) HSP 1 Score: 404.4 bits (1038), Expect = 5.9e-109 Identity = 202/215 (93.95%), Postives = 211/215 (98.14%), Query Frame = 0
BLAST of Sed0011217.1 vs. ExPASy Swiss-Prot
Match: Q8GW29 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 OS=Arabidopsis thaliana OX=3702 GN=LOG7 PE=1 SV=2) HSP 1 Score: 381.3 bits (978), Expect = 7.1e-105 Identity = 189/215 (87.91%), Postives = 203/215 (94.42%), Query Frame = 0
BLAST of Sed0011217.1 vs. ExPASy Swiss-Prot
Match: Q8L8B8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana OX=3702 GN=LOG3 PE=1 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 3.8e-90 Identity = 163/206 (79.13%), Postives = 185/206 (89.81%), Query Frame = 0
BLAST of Sed0011217.1 vs. ExPASy Swiss-Prot
Match: Q9LFH3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis thaliana OX=3702 GN=LOG4 PE=1 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 3.5e-88 Identity = 160/206 (77.67%), Postives = 183/206 (88.83%), Query Frame = 0
BLAST of Sed0011217.1 vs. ExPASy Swiss-Prot
Match: B9F166 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL2 PE=3 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 3.9e-87 Identity = 157/203 (77.34%), Postives = 181/203 (89.16%), Query Frame = 0
BLAST of Sed0011217.1 vs. ExPASy Swiss-Prot
Match: Q0JBP5 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL6 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL6 PE=2 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 3.9e-87 Identity = 160/209 (76.56%), Postives = 182/209 (87.08%), Query Frame = 0
BLAST of Sed0011217.1 vs. ExPASy TrEMBL
Match: A0A0A0LEQ3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3659 GN=Csa_3G778430 PE=3 SV=1) HSP 1 Score: 415.6 bits (1067), Expect = 1.2e-112 Identity = 208/215 (96.74%), Postives = 212/215 (98.60%), Query Frame = 0
BLAST of Sed0011217.1 vs. ExPASy TrEMBL
Match: A0A6J1CSQ5 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Momordica charantia OX=3673 GN=LOC111014230 PE=3 SV=1) HSP 1 Score: 414.8 bits (1065), Expect = 2.1e-112 Identity = 208/215 (96.74%), Postives = 213/215 (99.07%), Query Frame = 0
BLAST of Sed0011217.1 vs. ExPASy TrEMBL
Match: A0A6J1J161 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111481749 PE=3 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 1.3e-109 Identity = 203/215 (94.42%), Postives = 211/215 (98.14%), Query Frame = 0
BLAST of Sed0011217.1 vs. ExPASy TrEMBL
Match: A0A6J1F2P8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111441836 PE=3 SV=1) HSP 1 Score: 404.4 bits (1038), Expect = 2.9e-109 Identity = 202/215 (93.95%), Postives = 211/215 (98.14%), Query Frame = 0
BLAST of Sed0011217.1 vs. ExPASy TrEMBL
Match: A0A6J1FQZ0 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111446119 PE=3 SV=1) HSP 1 Score: 401.7 bits (1031), Expect = 1.9e-108 Identity = 201/215 (93.49%), Postives = 209/215 (97.21%), Query Frame = 0
BLAST of Sed0011217.1 vs. TAIR 10
Match: AT5G06300.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 381.3 bits (978), Expect = 5.0e-106 Identity = 189/215 (87.91%), Postives = 203/215 (94.42%), Query Frame = 0
BLAST of Sed0011217.1 vs. TAIR 10
Match: AT2G37210.1 (lysine decarboxylase family protein ) HSP 1 Score: 332.4 bits (851), Expect = 2.7e-91 Identity = 163/206 (79.13%), Postives = 185/206 (89.81%), Query Frame = 0
BLAST of Sed0011217.1 vs. TAIR 10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 325.9 bits (834), Expect = 2.5e-89 Identity = 160/206 (77.67%), Postives = 183/206 (88.83%), Query Frame = 0
BLAST of Sed0011217.1 vs. TAIR 10
Match: AT2G35990.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 320.9 bits (821), Expect = 8.0e-88 Identity = 156/201 (77.61%), Postives = 179/201 (89.05%), Query Frame = 0
BLAST of Sed0011217.1 vs. TAIR 10
Match: AT2G28305.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 320.5 bits (820), Expect = 1.1e-87 Identity = 153/198 (77.27%), Postives = 180/198 (90.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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